AGAP008926-PA, maker-scaffold301_size216225-snap-gene-1.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP008926-PA vs. L. salmonis genes
Match: EMLSAG00000012554 (supercontig:LSalAtl2s:LSalAtl2s927:101891:110273:1 gene:EMLSAG00000012554 transcript:EMLSAT00000012554 description:"maker-LSalAtl2s927-augustus-gene-1.10") HSP 1 Score: 270.396 bits (690), Expect = 2.783e-84 Identity = 131/266 (49.25%), Postives = 179/266 (67.29%), Query Frame = 0 Query: 154 PQEIKKTLVALLFTSFNFFLTCVSLAFVHENRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLR-QSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFNIP 418 P E KTL+A +F + + T SLA HE P + PLPD LD + YQ W L SEILI + M + +V+ H RF++LRR+ LI+G Y YRAITM++TVLP DPNYKCAPK +T E+ +RV +++G GLSING HIYCGDYIYSGHTM++I+ +LVI+EY+ K+ LL W + + +I L+L+RGHYS+DV++AY+ TRLW +YHTL + LR +S E N+ + WWF F++FE V A L E+++P Sbjct: 235 PGEPLKTLIAFIFLAVAWIATTTSLALTHERVPDVNPLPDIFLDNVVYQSWGLDTSEILIIISMWMAFIVVLCHNDRFVILRRIFLIIGIHYYYRAITMYITVLPKADPNYKCAPKLD-KMTFLEIAQRVLKLLSGMGLSINGQHIYCGDYIYSGHTMSLIMTYLVIKEYSPKRWF-LLHWFSLIITLTGIITLLLARGHYSIDVLIAYYITTRLWWIYHTLAHNQNLRVKSDEENYLGSMWWFPIFQYFEKMVPAKPLTREYSLP 498
BLAST of AGAP008926-PA vs. L. salmonis genes
Match: EMLSAG00000009284 (supercontig:LSalAtl2s:LSalAtl2s594:25377:32257:1 gene:EMLSAG00000009284 transcript:EMLSAT00000009284 description:"maker-LSalAtl2s594-augustus-gene-0.9") HSP 1 Score: 212.231 bits (539), Expect = 2.091e-65 Identity = 118/297 (39.73%), Postives = 170/297 (57.24%), Query Frame = 0 Query: 149 QPKRYPQEIKKTLVALLFTSFNFFLTCVSLAFVHENRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKF---GAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEG-------NHFSTFWWFQSFRWFEGNVKAGKLPNEFNIPWIL-RLGLAKFRRIEPS 434 + K+YP+E++KTL A LF NF T SL+ +HE RPL+ IV+RR+ I+G LY YRAITM+VT LPA +P+Y CAPK G LT RE+ KR FGLSING H+YCGDYIYSGHTM ++ +L+I EYT ++ L ++ W A+ A+++L+L+RGHYS+DVI+AY+ TRL+ +YH++ L++SS+ N F WW++ +FE NV +G LPN +++P++ + L +RR+ S Sbjct: 80 RRKKYPKEMRKTLGAFLFMIANFIATTTSLSIIHEQRPLM-------------------------------------------IVMRRMFFILGLLYGYRAITMFVTXLPAANPSYHCAPKLVDSGRVLTVREVIKR-------FGLSINGKHVYCGDYIYSGHTMIAVLCYLIIAEYTDRR-WYLFHYLVWLLAVTAIVMLMLARGHYSIDVIIAYYITTRLFWLYHSIAYFDSLKRSSQALGPDRSFNRFEKIWWWRLLSYFERNVHSGPLPNIYSLPFLRPKWMLGLYRRVSTS 325
BLAST of AGAP008926-PA vs. L. salmonis genes
Match: EMLSAG00000001757 (supercontig:LSalAtl2s:LSalAtl2s12:1700937:1704256:1 gene:EMLSAG00000001757 transcript:EMLSAT00000001757 description:"maker-LSalAtl2s12-augustus-gene-17.12") HSP 1 Score: 151.369 bits (381), Expect = 8.776e-40 Identity = 88/255 (34.51%), Postives = 139/255 (54.51%), Query Frame = 0 Query: 172 FLTCVSLAFVHENRP---LIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPK-FGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFNIPWILR 422 ++T + VH+ P + PPLPD LLD + + WA +EI V + + V+ FHKHRFI+ RR I G ++L R +TM +T L P + KC+P+ +G +++ + I G GL+ G CGDY++ GHT+ + + + I EYT K + L TW + V ++ + HYS+DV +A++ ++RL+ YHTL Q ++ + + F WF F +FE V G++PNEF P L+ Sbjct: 107 WMTAFVMVIVHDRVPDTDVYPPLPDILLDNIPHITWAFEMAEITGMVLLALWASVLIFHKHRFILARRFFSISGTIFLLRCVTMLITSLSVPGKHLKCSPRPYGDVWNK---YRQAYQIWXGAGLTTQGVRT-CGDYMFXGHTVGLTLLNFFITEYTSTK-IYFLHTFTWICNVFGVFFILAAHEHYSIDVFIAFYISSRLFMYYHTLGNSRSDSQFAKEENRNWF-WFPLFSYFEEGVH-GQIPNEFEWPLTLK 354
BLAST of AGAP008926-PA vs. SwissProt
Match: gi|75218002|sp|Q56Y01.1|IPCS3_ARATH (RecName: Full=Phosphatidylinositol:ceramide inositolphosphotransferase 3; AltName: Full=Inositol-phosphorylceramide synthase 3; Short=AtIPCS3; Short=IPC synthase 3; AltName: Full=Protein ERH1-like1; AltName: Full=Sphingolipid synthase 3) HSP 1 Score: 58.151 bits (139), Expect = 3.738e-8 Identity = 39/129 (30.23%), Postives = 67/129 (51.94%), Query Frame = 0 Query: 236 RVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIY-CGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYF 363 RV + + R IT + T LP P NY C + G+ L K V ++ ++ IY CGD I+S HT+ ++ ++ Y R + ++ + W A+I IL++ SR HY+VD+++A++ Sbjct: 114 RVFVYLAASQSLRIITFFATQLPGP--NYHC--REGSKLAKIPPPKNVLEVLL---INFPDGVIYGCGDLIFSSHTIFTLV---FVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWY 232
BLAST of AGAP008926-PA vs. nr
Match: gi|817082048|ref|XP_012263566.1| (phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform X3 [Athalia rosae]) HSP 1 Score: 261.922 bits (668), Expect = 2.128e-79 Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 0 Query: 48 EDGEADPYSSPSDESDEAQR-PLLEWSETSGL----GVSTASYSLPINSQVLNQSVPGVHGNHHPPSSLPHPQHVNNRKTGSVGQNGDSVNIPIPVGSFTVSSSRDQPKRYPQEIKKTLVALLFTSFNFFLTCVSLAFVHE---NRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFN--IPWILRLGLAK 427 E G S + SD QR PLL + T GVS++S + + + G+ HP +LP N +G V ++IP P+ R++P R+P+E KTL+A LF NF LT SLA VHE +R PLPD +LD + Q+WAL SEILI + V I FHKHRFIV RR+ L++G LY+ R++TM+VTVLP Y C+PK + + + KRV +++GFGLSING H YCGDYIYSGHT+ +++ +L+I+EY+ ++ + W+T +++ VI+++++ GHY+VDV++AY+ TRLW +YHTL + L+Q N + FWWF F++FE NV G +P +++ +PW R LAK Sbjct: 50 ETGVDGSTSGMAQSSDVYQRQPLLPGAPTKNKDKWGGVSSSSEYYEDDE---DDKIDGLGHTRHP--NLP-----NGSGSGIV-----KLDIPAPL--------REEP-RFPKEKWKTLLAFLFMVVNFILTTASLAMVHERVPDRATYGPLPDVVLDNIVAQDWALNVSEILIMIVSNSAMVFIIFHKHRFIVFRRIFLLMGLLYMMRSVTMYVTVLPVASKTYFCSPKANNS-SPLLITKRVLQLISGFGLSINGKHTYCGDYIYSGHTVVLVLSYLIIKEYSPRRC-QPIHWLTGLMSLVGVIMVLIAHGHYTVDVLIAYYVTTRLWYIYHTLANNPFLKQYGPNNFLARFWWFPMFKYFEKNV-GGTVPRQYDWPLPWPRRF-LAK 411
BLAST of AGAP008926-PA vs. nr
Match: gi|936587682|ref|XP_014207272.1| (phosphatidylcholine:ceramide cholinephosphotransferase 2 isoform X2 [Copidosoma floridanum]) HSP 1 Score: 261.536 bits (667), Expect = 2.211e-79 Identity = 136/307 (44.30%), Postives = 198/307 (64.50%), Query Frame = 0 Query: 118 NNRKTGSVGQNGDSVNIPIPVGSFTVSSSRDQPKRYPQEIKKTLVALLFTSFNFFLTCVSLAFVHE---NRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFN--IPW 419 + R G +G + I IP+ R++P R+P+E KT++A +F + NF LT SLA VHE +R + PLPD +LD + Q+WAL SEI+I + V + FHKHR+IVLRR+ L++G LY R+ITM+VTVLP Y C+PK + + + KRV +++GFGLSING H YCGDYIYSGHT+ +++ +L+IQEY+ KK + W+ +A++ VI+L++S GHY+VDV++AY+ TRLW MYHTL + +L+Q N + WWF FR+FE N+ G +P ++ +PW Sbjct: 103 HTRHPGIPNGSGSEIKIEIPI------PLREEP-RFPKEKGKTVLAFIFMTANFILTTTSLAVVHERVPDRNVYGPLPDVVLDNVEAQDWALAVSEIIIIIVSNSAMVFVIFHKHRYIVLRRIFLLMGLLYFMRSITMYVTVLPVVSKTYHCSPKENST-SPLLITKRVLQLISGFGLSINGKHTYCGDYIYSGHTVVLVLSYLIIQEYSPKKCYP-VHWLAGISAVVGVIMLLISHGHYTVDVLIAYYVTTRLWNMYHTLANNALLKQYGPNNFLARHWWFPLFRYFERNI-GGTVPRQYEWPLPW 399
BLAST of AGAP008926-PA vs. nr
Match: gi|1183235430|ref|XP_020710493.1| (phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform X4 [Athalia rosae]) HSP 1 Score: 261.536 bits (667), Expect = 2.523e-79 Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 0 Query: 48 EDGEADPYSSPSDESDEAQR-PLLEWSETSGL----GVSTASYSLPINSQVLNQSVPGVHGNHHPPSSLPHPQHVNNRKTGSVGQNGDSVNIPIPVGSFTVSSSRDQPKRYPQEIKKTLVALLFTSFNFFLTCVSLAFVHE---NRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFN--IPWILRLGLAK 427 E G S + SD QR PLL + T GVS++S + + + G+ HP +LP N +G V ++IP P+ R++P R+P+E KTL+A LF NF LT SLA VHE +R PLPD +LD + Q+WAL SEILI + V I FHKHRFIV RR+ L++G LY+ R++TM+VTVLP Y C+PK + + + KRV +++GFGLSING H YCGDYIYSGHT+ +++ +L+I+EY+ ++ + W+T +++ VI+++++ GHY+VDV++AY+ TRLW +YHTL + L+Q N + FWWF F++FE NV G +P +++ +PW R LAK Sbjct: 44 ETGVDGSTSGMAQSSDVYQRQPLLPGAPTKNKDKWGGVSSSSEYYEDDE---DDKIDGLGHTRHP--NLP-----NGSGSGIV-----KLDIPAPL--------REEP-RFPKEKWKTLLAFLFMVVNFILTTASLAMVHERVPDRATYGPLPDVVLDNIVAQDWALNVSEILIMIVSNSAMVFIIFHKHRFIVFRRIFLLMGLLYMMRSVTMYVTVLPVASKTYFCSPKANNS-SPLLITKRVLQLISGFGLSINGKHTYCGDYIYSGHTVVLVLSYLIIKEYSPRRC-QPIHWLTGLMSLVGVIMVLIAHGHYTVDVLIAYYVTTRLWYIYHTLANNPFLKQYGPNNFLARFWWFPMFKYFEKNV-GGTVPRQYDWPLPWPRRF-LAK 405
BLAST of AGAP008926-PA vs. nr
Match: gi|668458238|gb|KFB46165.1| (hypothetical protein ZHAS_00014165 [Anopheles sinensis]) HSP 1 Score: 270.781 bits (691), Expect = 2.555e-79 Identity = 148/342 (43.27%), Postives = 220/342 (64.33%), Query Frame = 0 Query: 113 HPQHVNNRKTGSVGQNGDSVNIPIPVGSFTVSSSRDQPK-RYPQEIKKTLVALLFTSFNFFLTCVSLAFVHE---NRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELFKRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFNIPWILRLGLAKFRRIEPSPGLRRRRRRSRANSNS 450 H Q+ ++ + + D+V I I V S RD P+ RYP+EI KTL+AL+F + NFFL VSL+ VH+ +R PLPD LDR+ Q+WAL SEILI V + ++I FHKHRFIV+RRV L++ LYL R++TM+VTVLP Y C+PK A+ ++ + KR F +++G GLSING IYCGDYIYSGHT+T+++G+LVI EY+ K+ + W+ W ++ V++++++ GHY+VDV++AY+ TRL+ YHTL + +L + + N+ WW+ +FR+FE NV+ G +P +++ P L L A ++ PGL + R R+ N Sbjct: 40 HQQNSQPPQSDAGSPSSDAVMIKIDVPS----PLRDDPQQRYPKEIGKTLLALVFLALNFFLATVSLSLVHDRVPDRDTHGPLPDAFLDRVQPQDWALDVSEILIMVVVNSCVLLITFHKHRFIVMRRVFLLLSVLYLMRSMTMYVTVLPVSSRTYYCSPKSNAS-SAGVIVKRAFQLISGMGLSINGKQIYCGDYIYSGHTVTLVLGYLVISEYSPKRFWP-IHWIYWAISLTGVVMVLVAHGHYTVDVLIAYYATTRLFWTYHTLANNSLLLKQNGNNYIGREWWYFAFRYFERNVR-GPIPLQYDCP--LSLPSAWAKKSPKLPGLTEQLVRKRSEHNE 372
BLAST of AGAP008926-PA vs. nr
Match: gi|345494895|ref|XP_003427395.1| (PREDICTED: phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform X3 [Nasonia vitripennis] >gi|645018671|ref|XP_008210762.1| PREDICTED: phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform X3 [Nasonia vitripennis] >gi|645018679|ref|XP_008210764.1| PREDICTED: phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform X3 [Nasonia vitripennis]) HSP 1 Score: 260.766 bits (665), Expect = 3.282e-79 Identity = 146/321 (45.48%), Postives = 202/321 (62.93%), Query Frame = 0 Query: 113 HPQHVNNRKTGSVGQNGDSVNIPIPVGSFTVSSSRDQPKRYPQEIKKTLVALLFTSFNFFLTCVSLAFVHE---NRPLIPPLPDQLLDRLHYQEWALYGSEILISVQMVIVGVVIFFHKHRFIVLRRVLLIVGCLYLYRAITMWVTVLPAPDPNYKCAPKFGAALTSRELF-KRVFTIMTGFGLSINGNHIYCGDYIYSGHTMTIIIGHLVIQEYTRKKSLSLLRWVTWFNAIIAVILLVLSRGHYSVDVILAYFFATRLWAMYHTLCGHLMLRQSSEGNHFSTFWWFQSFRWFEGNVKAGKLPNEFN--IPWILRLGLAK 427 HP N +G + ++IP P+ R++P R+P+E KT A LF NF LT SLA VHE +R PLPD +LD + Q+WAL SEILI + V I FHKHRFIV+RR+ L++G LY+ R+ITM+VTVLP Y C+PK A TS L KRV +++GFGLSING H YCGD+IYSGHT+ +++ +L+I+EY+ KK + W+ ++ + VI++++S GHY+VDVI+AY+ TRLW +YHT+ + L+Q N + WWF FR+FE NV +G LP ++ +PW RL LAK Sbjct: 92 HPGLPNGSGSGII-----KIDIPAPL--------REEP-RFPKEKWKTFFAFLFMVVNFILTTASLAMVHERVPDRTTYGPLPDVVLDHVAAQDWALNVSEILIMIMSNSAIVFIIFHKHRFIVVRRIFLLMGLLYMMRSITMYVTVLPMSSKTYYCSPK--ANNTSPLLVSKRVLQLISGFGLSINGKHTYCGDFIYSGHTVVLVLSYLIIKEYSPKKCHP-VHWLAGISSFVGVIMVLISHGHYTVDVIIAYYVTTRLWYIYHTMANNAHLKQYGPNNFLARLWWFPLFRYFEKNV-SGTLPRQYEWPLPWPRRL-LAK 393 The following BLAST results are available for this feature:
BLAST of AGAP008926-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of AGAP008926-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 21
Pagesback to top
BLAST of AGAP008926-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold301_size216225:199828..203572+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold301_size216225-snap-gene-1.21 ID=maker-scaffold301_size216225-snap-gene-1.21|Name=AGAP008926-PA|organism=Tigriopus kingsejongensis|type=gene|length=3745bp|location=Sequence derived from alignment at scaffold301_size216225:199828..203572+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP008926-PA' has the following synonyms
Add to Basket
|