atp-dependent dna helicase, maker-scaffold307_size214811-snap-gene-1.2 (gene) Tigriopus kingsejongensis

Overview
Nameatp-dependent dna helicase
Unique Namemaker-scaffold307_size214811-snap-gene-1.2
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001573 (supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1 gene:EMLSAG00000001573 transcript:EMLSAT00000001573 description:"maker-LSalAtl2s1271-augustus-gene-0.23")

HSP 1 Score: 100.138 bits (248), Expect = 1.717e-25
Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPA---------IST------------------SDIFGFDNFRGTQEEI---ITSIASGKNTFVIMP---------TGAGKSLCYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            LK  FG  +FR  Q   + +     +TFV+MPTG GKSLCYQLPA         IS                   +D    D++ G Q +I   +  +  G     + P          G   SL Y    ++   +DEAHC+S+WGHDFRP+Y+ +   + S+  ++P +ALTATATP+V+ DI   LNM
Sbjct:  564 LKSKFGIRDFRPNQLPAVNAALLNHDTFVLMPTGGGKSLCYQLPASIQGGVTVVISPLVSLIYDQVSKLNGLGIPADHLSGDDY-GRQRKIYDKLRLLTPGLTLLYVTPEKISASNELNGVFSSL-YSRKLLNRFVIDEAHCVSQWGHDFRPDYKLLHK-LRSVYPEVPFMALTATATPRVRTDILHQLNM 751
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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000003002 (supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-1 gene:EMLSAG00000003002 transcript:EMLSAT00000003002 description:"maker-LSalAtl2s170-snap-gene-6.11")

HSP 1 Score: 95.1301 bits (235), Expect = 9.170e-24
Identity = 63/183 (34.43%), Postives = 95/183 (51.91%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSI-ASGKNTFVIMPTGAGKSLCYQLPAISTSDI-FGFDNFRGTQEEIITS--IASGKNTFV-----IMPTGAGK------SLCYQLPA-ISTS---------------AVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            L   FG+  FR  Q  II+ +     ++ V+M TG GKSLCYQ PA+ +  +           E+ +    +++  +TF+     +MP            + Y  P  + TS               AVDEAHC+S+WGHDFR  YRK+  I++    ++PI+ LTATATP+VQ+DI K+L++
Sbjct:   49 LSSSFGYSAFRPVQWNIISRVLCDAGDSLVVMATGYGKSLCYQFPAVYSGKVTLVISPLISLMEDQVAKLRVSNIPSTFLGSGQTMMPDTMSNIKENKYRVVYVTPEYVDTSLDTLSKLLKDRLVLVAVDEAHCVSQWGHDFRSSYRKL-GILKQTFPNVPIMGLTATATPEVQKDISKSLSL 230
[Close]
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001574 (supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1 gene:EMLSAG00000001574 transcript:EMLSAT00000001574 description:"maker-LSalAtl2s1271-augustus-gene-0.21")

HSP 1 Score: 80.1073 bits (196), Expect = 1.874e-18
Identity = 58/172 (33.72%), Postives = 84/172 (48.84%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEE-----IITSIASGKNTFVIMPTGAGKSLCYQLPAI--STSDIFGFDNFR----------GTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSA---VDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            L   FG  +FR  ++E     I+      ++ FV MPTG+GKSL Y LP +      I   +  R           T+   +T      NTF        KS+  +L   +      +DEAHC+S+WGHDFRP+Y K+  + + IN    ++ALTATA+ +V  D+ K L M
Sbjct:   16 LNSFFGHPSFRSKEQEAAIRAIVEEEDCERDVFVSMPTGSGKSLVYXLPGVLLPKGRITIVERKRVLRDIHAKCPDTRFLYVTPEQCATNTF--------KSILEKLVKFNVLGYFVIDEAHCVSQWGHDFRPDYLKLGQLRKIIN-KTRVLALTATASKEVAADVFKQLKM 178
[Close]
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001248 (supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:1 gene:EMLSAG00000001248 transcript:EMLSAT00000001248 description:"snap_masked-LSalAtl2s1202-processed-gene-0.15")

HSP 1 Score: 76.2554 bits (186), Expect = 3.593e-17
Identity = 54/183 (29.51%), Postives = 78/183 (42.62%), Query Frame = 0 
Query:    5 FGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPA------------------------------ISTSDIFGFDNFRGTQEEIITSIASGKNTFVIMPT----GAGKSLCYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMD 153
            FG   FR  Q+E I  I  G+ T V++ TG+GKSL YQ+PA                              +  +D+F  D  R    +I   +   K   + M         K+L   +P +    +DEAHC+S+W H+FRP Y ++   I        I+ L ATAT K    I + L +D
Sbjct:  268 FGHSEFRRGQKEAIFRILRGEXTLVVLSTGSGKSLIYQIPAYLLAKEDSRLTIVVSPLVSLMEDQLRNMPTLIQADLFHSDLGRTQLVKIKDGLRENKLAILFMTPETLFSQLKTLKEFIPRLGFVCIDEAHCMSQWSHNFRPAYFQLGGAIRESLKATTILGLXATATEKTITTIAERLQVD 450
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|28201770|sp|O18017.2|BLM_CAEEL (RecName: Full=Bloom syndrome protein homolog; AltName: Full=High incidence of males protein 6; AltName: Full=RecQ helicase homolog)

HSP 1 Score: 118.627 bits (296), Expect = 1.937e-30
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSDI---------------------------FGFDNFRGTQEEIITSIASGKNTFVIM--------PTGAGKSLCYQLPA---ISTSAVDEAHCISEWGHDFRPEYRKIRSIIES-INIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK  FGF+ FR  Q++ I S   G +TFV+MPTGAGKSLCYQLPA+    +                              D     QE+I   + SG  +  ++         +G   S+ + L     ++   +DEAHC+S+WGHDFRP+Y K+ S+ E   N  +PIIALTATATPK+  D + +L M +S
Sbjct:  239 LKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFDLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTDARDHLKMQNS 432
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75334307|sp|Q9FT72.1|RQL3_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName: Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3)

HSP 1 Score: 115.161 bits (287), Expect = 2.555e-29
Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 0 
Query:    5 FGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSDI----------------------FGFDNFRGTQ-----EEIITSIASGKNT----FVIMPTGAGKSLCYQLPAISTS------AVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            FG  +FRG Q E I ++ SG++ F +MPTG GKS+CYQ+PA++   I                         +    TQ      +I   + SGK +    +V     A K    +L  + +       A+DEAHCIS WGHDFRP YR++ ++ +S+  D+P++ALTATA PKVQ+D+  +LN+
Sbjct:   32 FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSL-ADVPVLALTATAAPKVQKDVIDSLNL 215
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|54041622|sp|P15043.5|RECQ_ECOLI (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 108.997 bits (271), Expect = 3.726e-27
Identity = 65/187 (34.76%), Postives = 95/187 (50.80%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSDI---------------------------FGFDNFRGTQEEIITSIASGKNTFV------IMPTGAGKSLCYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDD 154
            L++ FG+  FR  QEEII ++ SG++  V+MPTG GKSLCYQ+PA+  + +                                 R  Q E++T   +G+   +      +M     + L +  P +   AVDEAHCIS+WGHDFRPEY  +  + +     LP +ALTATA    +QDI + L ++D
Sbjct:   17 LQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLL--AVDEAHCISQWGHDFRPEYAALGQLRQRFPT-LPFMALTATADDTTRQDIVRLLGLND 200
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|2500112|sp|P71359.1|RECQ_HAEIN (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 108.997 bits (271), Expect = 4.099e-27
Identity = 66/185 (35.68%), Postives = 96/185 (51.89%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIS--------------TSDIFGFDNFRGTQEEIITS-------------IASGK-NTFVIMPTGAGKSLCYQLPAISTS---AVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDD 154
            LK +FG+ +FR  QEE+I +  +G++  V+M TG GKSLCYQ+PA+                 D        G + + + S             + SG+     + P     +  +QL + S     A+DEAHCIS+WGHDFRPEY ++  +  S   D PI+ALTATA    QQDI ++LN+ +
Sbjct:   20 LKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFP-DAPIMALTATADYATQQDILRHLNLKN 203
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|18202817|sp|Q9CL21.1|RECQ_PASMU (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 105.531 bits (262), Expect = 5.520e-26
Identity = 63/183 (34.43%), Postives = 93/183 (50.82%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIS---------------------------TSDIFGFDNFRGTQEEIITSIASGK-NTFVIMPTGAGKSLCYQLPA---ISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            L  +FG+ +FR  QEE+I +   GK++ VIM TG GKSLCYQ+PA+                             +D          Q+++   + SG      + P     +  + L +   +S  A+DEAHCIS+WGHDFRPEY ++   ++S     PI+ALTATA    +QDI ++LN+
Sbjct:   30 LHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSGTLKLLYVSPEKVMTTSFFHLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGG-LKSCFPHAPIMALTATADHATRQDILRHLNL 211
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75334308|sp|Q9FT73.1|MED34_ARATH (RecName: Full=Mediator of RNA polymerase II transcription subunit 34; AltName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2)

HSP 1 Score: 105.531 bits (262), Expect = 5.905e-26
Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 0 
Query:    3 DIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPA---------------ISTSDIFGFDNFRGTQEEIITSIASGKN-TFV---------------IMPTGAGKSL--------CYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            ++FG   +R  Q+EII +I +G++  VIM  G GKSLCYQLPA               +    + G     G    ++TS +  +N  FV               + P    KS         C+    +S  ++DEAHC S+WGHDFRP+Y+ + SI+++    +P++ALTATAT KVQ D+ + L++
Sbjct:   83 NVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSPLLSLIQDQVMGLAAL-GISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNL-SILKTQFPKVPMVALTATATQKVQNDLIEMLHI 269
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|17366114|sp|Q9VGI8.1|BLM_DROME (RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName: Full=Bloom syndrome helicase ortholog; AltName: Full=Mutagen-sensitive protein 309; AltName: Full=RecQ helicase homolog)

HSP 1 Score: 104.76 bits (260), Expect = 1.379e-25
Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = 0 
Query:    5 FGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIST-----------SDIFGFDNFRGTQEEIITSIASGKNTFVIMP-------TGAGKSLCYQLP-AISTSA-------------------VDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDD 154
            FG  +FR  Q ++I +   G + FV+MPTG GKSLCYQLPAI T           S IF   N   + +    S++  +    +M              L Y  P  IS+SA                   +DEAHC+S+WGHDFRP+Y+K+  +++    ++P IALTATATP+V+ DI   LN+ +
Sbjct:  733 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKL-GVLKKRFPNVPTIALTATATPRVRLDILAQLNLKN 919
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|544604564|sp|D4ACP5.1|RECQ5_RAT (RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA helicase, RecQ-like type 5; Short=RecQ5; AltName: Full=RecQ protein-like 5)

HSP 1 Score: 102.449 bits (254), Expect = 8.855e-25
Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGT-QEEIITSIASG-KNTFVIMPTGAGKSLCYQLPAISTSDIF------------GFDNFRGTQEEIIT-----SIASGKNTFVIMPTGAGKS-LCYQLPAISTSA-------------------VDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            LK +FGFD+F+   QE  I ++  G K+ FV MPTGAGKSLCYQLPA+    I               D+    + ++ +     S+   K     +     ++ L Y  P ++ SA                   VDEAHC+S+WGHDFRP+Y ++ ++   +    P +ALTATATP+VQ+D+   L++
Sbjct:   20 LKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGAGKSLCYQLPAVLAKGITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRL-AHAPCVALTATATPQVQEDVFAALHL 209
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|81342384|sp|O34748.1|RECQ_BACSU (RecName: Full=Probable ATP-dependent DNA helicase RecQ)

HSP 1 Score: 101.679 bits (252), Expect = 1.345e-24
Identity = 71/185 (38.38%), Postives = 93/185 (50.27%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGK-NTFVIMPTGAGKSLCYQLPA-------ISTSDIFGF--DNFRGTQEEIITS--IASGKNTFVI------MPTGAGKSLCYQLPAISTS---------------AVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNM 152
            L   FG++ FR  Q+E I  +   + NT  IMPTG GKS+CYQ+PA       I  S +     D     +E  I +  I S ++   I      +  GA K L Y  P   TS               A+DEAHCIS+WGHDFRP YR I  +   ++    I+ALTATATP+V  DI K L++
Sbjct:    9 LAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGTTIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYK-LFYITPERLTSIEFIRILQGIDVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELHDKPVIMALTATATPEVHDDICKQLHI 192
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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|19859341|sp|P40724.3|RECQ_SALTY (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 101.293 bits (251), Expect = 1.639e-24
Identity = 63/187 (33.69%), Postives = 90/187 (48.13%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAI---------------------------STSDIFGFDNFRGTQEEIITSIASGKNTFV------IMPTGAGKSLCYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDD 154
            L++ FG+  FR  QE II +  SG++  V+MPTG GKSLCYQ+PA+                             +        R  Q E++    +G+   +      +M       L +  P +   AVDEAHCIS+WGHDFRPEY  +  + +     LP +ALTATA    +QDI + L ++D
Sbjct:   17 LQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLL--AVDEAHCISQWGHDFRPEYAALGQLRQRFPA-LPFMALTATADDTTRQDIIRLLGLND 200
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1245962916|ref|WP_096192196.1| (DNA helicase RecQ [Cytophagales bacterium TFI 002])

HSP 1 Score: 192.2 bits (487), Expect = 2.388e-54
Identity = 108/186 (58.06%), Postives = 121/186 (65.05%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTS--------------------DIFGFD-NF------RGTQEEIITSIASGKNTFV-IMPTGAGKSLCYQL---PAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK IFGFDNFRGTQE II SIASGKNTFVIMPTGAGKSLCYQLPAIST                     + FG +  F      +     +   + SG+   + I P    K    +      +S  AVDEAHCISEWGHDFRPEYR+IRSIIES++ +LPIIALTATATPKVQQDIQKNLNMDDS
Sbjct:   13 LKQIFGFDNFRGTQEAIIASIASGKNTFVIMPTGAGKSLCYQLPAISTDGTAVVISPLIALMKNQVDQMNAFGINAQFLNSTLNKSEMNRVKKDVLSGECKLLYIAPESLTKEDNLKFLKEAKLSFVAVDEAHCISEWGHDFRPEYRRIRSIIESLDNELPIIALTATATPKVQQDIQKNLNMDDS 198

HSP 2 Score: 93.5893 bits (231), Expect = 2.812e-19
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:   42 QLPAISTSDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIST 95
            QL   +   IFGFDNFRGTQE II SIASGKNTFVIMPTGAGKSLCYQLPAIST
Sbjct:    7 QLLKENLKQIFGFDNFRGTQEAIIASIASGKNTFVIMPTGAGKSLCYQLPAIST 60
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1243934849|emb|SOE20452.1| (ATP-dependent DNA helicase RecQ [Cytophagales bacterium TFI 002])

HSP 1 Score: 192.2 bits (487), Expect = 2.593e-54
Identity = 108/186 (58.06%), Postives = 121/186 (65.05%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTS--------------------DIFGFD-NF------RGTQEEIITSIASGKNTFV-IMPTGAGKSLCYQL---PAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK IFGFDNFRGTQE II SIASGKNTFVIMPTGAGKSLCYQLPAIST                     + FG +  F      +     +   + SG+   + I P    K    +      +S  AVDEAHCISEWGHDFRPEYR+IRSIIES++ +LPIIALTATATPKVQQDIQKNLNMDDS
Sbjct:   12 LKQIFGFDNFRGTQEAIIASIASGKNTFVIMPTGAGKSLCYQLPAISTDGTAVVISPLIALMKNQVDQMNAFGINAQFLNSTLNKSEMNRVKKDVLSGECKLLYIAPESLTKEDNLKFLKEAKLSFVAVDEAHCISEWGHDFRPEYRRIRSIIESLDNELPIIALTATATPKVQQDIQKNLNMDDS 197

HSP 2 Score: 93.5893 bits (231), Expect = 2.951e-19
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:   42 QLPAISTSDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIST 95
            QL   +   IFGFDNFRGTQE II SIASGKNTFVIMPTGAGKSLCYQLPAIST
Sbjct:    6 QLLKENLKQIFGFDNFRGTQEAIIASIASGKNTFVIMPTGAGKSLCYQLPAIST 59
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|499902970|ref|WP_011583704.1| (DNA helicase RecQ [Cytophaga hutchinsonii] >gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406] >gi|1104040837|emb|SFX00555.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406])

HSP 1 Score: 177.563 bits (449), Expect = 3.926e-49
Identity = 102/186 (54.84%), Postives = 117/186 (62.90%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSDI--------------------FG----FDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLC-------YQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK +FG+D FRG QEEII ++ SGK+TFVIMPTGAGKSLCYQLPAIS   +                    FG    F N   T+ EI        N  + +   A +SL         +  AIS  A+DEAHCISEWGHDFRPEYRKI SIIESIN ++PIIALTATATPKVQ DIQKNL MDD+
Sbjct:   13 LKSVFGYDRFRGEQEEIINNVLSGKDTFVIMPTGAGKSLCYQLPAISLPGVAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLTKAEINRVKKETLNGEIKLLYVAPESLTKEDNILFLKKAAISFVAIDEAHCISEWGHDFRPEYRKIHSIIESINNNIPIIALTATATPKVQLDIQKNLQMDDA 198
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1237020870|ref|WP_095161238.1| (ATP-dependent DNA helicase RecQ [Flectobacillus sp. BAB-3569] >gi|1236749157|gb|PAC31933.1| ATP-dependent DNA helicase RecQ [Flectobacillus sp. BAB-3569])

HSP 1 Score: 175.637 bits (444), Expect = 3.110e-48
Identity = 98/186 (52.69%), Postives = 119/186 (63.98%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTS--------------------DIFGFD-NF------RGTQEEIITSIASGK-NTFVIMPTGAGK--SLCYQLPA-ISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK+ FG+  FRG QE+II +  +GKNTFVIMPTGAGKSLCYQLPAI+T                     + FG +  F      +    ++   + SG+     I P    K  +L +   A IS  A+DEAHCISEWGHDFRPEYR+IRSI+ES++  LPIIALTATATPKVQQDIQKNLNMDD+
Sbjct:   15 LKETFGYSQFRGEQEDIIKNTLAGKNTFVIMPTGAGKSLCYQLPAIATEGTAIVISPLIALMKNQVDQMNAFGINAQFLNSSLNKAEMTKVKNDVISGQVKLLYIAPESLTKEDNLAFLKQAKISFVAIDEAHCISEWGHDFRPEYRRIRSIVESLDSTLPIIALTATATPKVQQDIQKNLNMDDA 200
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|941713664|ref|WP_055148489.1| (ATP-dependent DNA helicase RecQ [Jiulongibacter sediminis] >gi|936516009|gb|KPM47927.1| ATP-dependent DNA helicase RecQ [Jiulongibacter sediminis])

HSP 1 Score: 174.866 bits (442), Expect = 4.851e-48
Identity = 100/186 (53.76%), Postives = 116/186 (62.37%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAIS---TSDIFG---------FDNFRG---------------TQEEIITSIASGKNTFV-IMPTGAGKS---LCYQLPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LKDIFGFD FRG Q++II SI  G NTFVIMPTGAGKSLCYQLPAI+   T+ +            D  +G                  ++   +  G+   + I P    K    +  +   +S  AVDEAHCISEWGHDFRPEYRKIRSIIESI+  LPIIALTATATPKVQ DI+KNLNMDDS
Sbjct:   14 LKDIFGFDKFRGEQDKIIHSIVKGDNTFVIMPTGAGKSLCYQLPAITLEGTAVVISPLIALMKNQVDQMKGFGINARFLNSTLNKSEMNKVKKDVLEGECKLLYIAPESLTKEDNLIFLKSAKLSFVAVDEAHCISEWGHDFRPEYRKIRSIIESIDEKLPIIALTATATPKVQLDIKKNLNMDDS 199
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1223987428|ref|WP_092018255.1| (RecQ family ATP-dependent DNA helicase [Pseudarcicella hirudinis] >gi|1099518667|emb|SFQ10648.1| ATP-dependent DNA helicase RecQ [Pseudarcicella hirudinis])

HSP 1 Score: 173.326 bits (438), Expect = 2.044e-47
Identity = 94/186 (50.54%), Postives = 116/186 (62.37%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTS--------------------DIFGFD-NF------RGTQEEIITSIASGK-NTFVIMPTGAGKSLCYQL---PAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK+ FGF  FRG QEEII +   GKNTFVIMPTGAGKSLCYQ+PAI+                      + FG +  F      +    ++ T + +G+     I P    K    +      +S  A+DEAHCISEWGHDFRPEYR+I+SI+ES++ +LPIIALTATATPKVQQDIQKNLNM+DS
Sbjct:   15 LKETFGFSQFRGEQEEIIQNTLDGKNTFVIMPTGAGKSLCYQMPAIAMDGTAIVISPLIALMKNQVDQMNAFGINAQFLNSSLNKTEMNKVKTEVLNGEVKLLYIAPESLTKEDNLEFLKQAKLSFVAIDEAHCISEWGHDFRPEYRRIKSIVESLDSNLPIIALTATATPKVQQDIQKNLNMEDS 200
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|763313607|ref|WP_044172057.1| (ATP-dependent DNA helicase RecQ [Flectobacillus major])

HSP 1 Score: 173.326 bits (438), Expect = 2.273e-47
Identity = 98/186 (52.69%), Postives = 118/186 (63.44%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTS--------------------DIFGFD-NF------RGTQEEIITSIASGK-NTFVIMPTGAGK--SLCYQLPA-ISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK+ FG+  FRG QEEII +  +GKNTFVIMPTGAGKSLCYQLPAI+T                     + FG +  F      +    ++   + SG+     I P    K  +L +   A IS  A+DEAHCISEWGHDFRPEYR+IRSI+ES++  LPIIALTATATPKVQ DIQKNLNMDD+
Sbjct:   15 LKETFGYSQFRGEQEEIIKNTLAGKNTFVIMPTGAGKSLCYQLPAIATEGTAIVISPLIALMKNQVDQMNAFGINAQFLNSSLNKAEMTKVKNDVISGQVKLLYIAPESLTKEDNLAFLKQAKISFVAIDEAHCISEWGHDFRPEYRRIRSIVESLDNTLPIIALTATATPKVQLDIQKNLNMDDA 200
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1232125553|gb|OYU64824.1| (ATP-dependent DNA helicase RecQ [Cytophagaceae bacterium BCCC1])

HSP 1 Score: 172.94 bits (437), Expect = 3.120e-47
Identity = 104/192 (54.17%), Postives = 118/192 (61.46%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPA-------ISTSDIFGFDNFRGTQEEIITSIASGKNTFVIMPT---------------GAGKSLCYQLP---------------AISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK+IFGFDNFRG QE+II SI SGKNTFVIMPTGAGKSLCYQLPA       I  S +         + ++   +A G N   +  T               GA K L Y  P                IS  AVDEAHCISEWGHDFRPEYRKI+ IIESI+ +LPIIALTATATPKVQ DI+K+L+MDDS
Sbjct:   14 LKEIFGFDNFRGEQEKIIKSIVSGKNTFVIMPTGAGKSLCYQLPATVLHGTAIVISPLIAL-----MKNQVDQMMAFGINAQFLNSTLNKSEMNRVKNDVVSGACK-LLYIAPESLTKVDNLEFLKKAKISFVAVDEAHCISEWGHDFRPEYRKIKEIIESIDDNLPIIALTATATPKVQLDIKKSLDMDDS 199
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|503172638|ref|WP_013407299.1| (ATP-dependent DNA helicase RecQ [Leadbetterella byssophila] >gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM 17132])

HSP 1 Score: 172.555 bits (436), Expect = 3.686e-47
Identity = 95/189 (50.26%), Postives = 113/189 (59.79%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPA--------------------ISTSDIFGFD-----------NFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQL---PAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            LK+IFGFDNFRG QE+II S+ SGKNTFVIMPTGAGKSLCYQLPA                    +     +G +                + ++I+ +        I P    K    +      IS  AVDEAHCISEWGHDFRPEYRKI+ IIE+I+  LPI+ALTATATPKVQ DI+K+LNMDDS
Sbjct:   14 LKEIFGFDNFRGEQEKIIKSVISGKNTFVIMPTGAGKSLCYQLPATVLEGTAIVISPLIALMKNQVDQLTAYGINAQFLNSTLNKSEMNRVKNDVISGVCK---LLYIAPESLTKEDNLEFLKKAKISFVAVDEAHCISEWGHDFRPEYRKIKDIIENIDTALPIVALTATATPKVQLDIKKSLNMDDS 199
[Close]
BLAST of atp-dependent dna helicase vs. nr
Match: gi|750346499|ref|WP_040628417.1| (DNA helicase RecQ [Mucilaginibacter paludis])

HSP 1 Score: 170.244 bits (430), Expect = 2.379e-46
Identity = 97/192 (50.52%), Postives = 119/192 (61.98%), Query Frame = 0 
Query:    1 LKDIFGFDNFRGTQEEIITSIASGKNTFVIMPTGAGKSLCYQLPAISTSDI--------------------FG-------FDNFRGTQEEIIT---SIASGKNTFVIMPTGAGKSLCYQ-------LPAISTSAVDEAHCISEWGHDFRPEYRKIRSIIESINIDLPIIALTATATPKVQQDIQKNLNMDDS 155
            L++ FGFDNF+G QE IIT+I SG +TFVIMPTG GKS+CYQLPA+ T  +                    FG       F N   T+ EI      + SGK   + +   A +SL  Q       L ++S  AVDEAHCISEWGHDFRPEYRKIR +I +I  ++PIIALTATATPKVQQDIQKNL M+++
Sbjct:   11 LQNFFGFDNFKGEQEAIITNILSGNDTFVIMPTGGGKSMCYQLPALMTDGMAIVISPLIALMKNQVDQLRAFGGSDSIAHFLNSSLTKSEITKVKEDVLSGKTKLLYV---APESLTKQENIDFLRLNSVSFVAVDEAHCISEWGHDFRPEYRKIRQVISNIGENIPIIALTATATPKVQQDIQKNLQMNNA 199
The following BLAST results are available for this feature:
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAG000000015731.717e-2535.08supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1... [more]
EMLSAG000000030029.170e-2434.43supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-... [more]
EMLSAG000000015741.874e-1833.72supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1... [more]
EMLSAG000000012483.593e-1729.51supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:... [more]
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BLAST of atp-dependent dna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|28201770|sp|O18017.2|BLM_CAEEL1.937e-3037.11RecName: Full=Bloom syndrome protein homolog; AltN... [more]
gi|75334307|sp|Q9FT72.1|RQL3_ARATH2.555e-2936.22RecName: Full=ATP-dependent DNA helicase Q-like 3;... [more]
gi|54041622|sp|P15043.5|RECQ_ECOLI3.726e-2734.76RecName: Full=ATP-dependent DNA helicase RecQ[more]
gi|2500112|sp|P71359.1|RECQ_HAEIN4.099e-2735.68RecName: Full=ATP-dependent DNA helicase RecQ[more]
gi|18202817|sp|Q9CL21.1|RECQ_PASMU5.520e-2634.43RecName: Full=ATP-dependent DNA helicase RecQ[more]
gi|75334308|sp|Q9FT73.1|MED34_ARATH5.905e-2633.86RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|17366114|sp|Q9VGI8.1|BLM_DROME1.379e-2536.17RecName: Full=Bloom syndrome protein homolog; Shor... [more]
gi|544604564|sp|D4ACP5.1|RECQ5_RAT8.855e-2534.55RecName: Full=ATP-dependent DNA helicase Q5; AltNa... [more]
gi|81342384|sp|O34748.1|RECQ_BACSU1.345e-2438.38RecName: Full=Probable ATP-dependent DNA helicase ... [more]
gi|19859341|sp|P40724.3|RECQ_SALTY1.639e-2433.69RecName: Full=ATP-dependent DNA helicase RecQ[more]

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BLAST of atp-dependent dna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1245962916|ref|WP_096192196.1|2.388e-5458.06DNA helicase RecQ [Cytophagales bacterium TFI 002][more]
gi|1243934849|emb|SOE20452.1|2.593e-5458.06ATP-dependent DNA helicase RecQ [Cytophagales bact... [more]
gi|499902970|ref|WP_011583704.1|3.926e-4954.84DNA helicase RecQ [Cytophaga hutchinsonii] >gi|110... [more]
gi|1237020870|ref|WP_095161238.1|3.110e-4852.69ATP-dependent DNA helicase RecQ [Flectobacillus sp... [more]
gi|941713664|ref|WP_055148489.1|4.851e-4853.76ATP-dependent DNA helicase RecQ [Jiulongibacter se... [more]
gi|1223987428|ref|WP_092018255.1|2.044e-4750.54RecQ family ATP-dependent DNA helicase [Pseudarcic... [more]
gi|763313607|ref|WP_044172057.1|2.273e-4752.69ATP-dependent DNA helicase RecQ [Flectobacillus ma... [more]
gi|1232125553|gb|OYU64824.1|3.120e-4754.17ATP-dependent DNA helicase RecQ [Cytophagaceae bac... [more]
gi|503172638|ref|WP_013407299.1|3.686e-4750.26ATP-dependent DNA helicase RecQ [Leadbetterella by... [more]
gi|750346499|ref|WP_040628417.1|2.379e-4650.52DNA helicase RecQ [Mucilaginibacter paludis][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold307_size214811supercontigscaffold307_size214811:152079..153040 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:DNA metabolic process
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold307_size214811-snap-gene-1.2-mRNA-1maker-scaffold307_size214811-snap-gene-1.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold307_size214811:152079..153040-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold307_size214811-snap-gene-1.2 ID=maker-scaffold307_size214811-snap-gene-1.2|Name=atp-dependent dna helicase|organism=Tigriopus kingsejongensis|type=gene|length=962bp|location=Sequence derived from alignment at scaffold307_size214811:152079..153040- (Tigriopus kingsejongensis)
ATAAGAAAGTCCTCAAGAATAACTTGAAAGATATTTTTGGTTTCGACAAT
TTCAGAGGAACCCAAGAAGAGATCATTACTTCCATTGCCAGTGGAAAAAA
CACCTTTGTCATAATGCCTACTGGTGCAGGGAAGTCGTTATGTTACCAGC
TACCAGCCATAAGCACATCGGGTACTGCCATTGTTATAAGCCCCTTGATC
GCTTTAATGAAAAACCAAGTGGATCAGATGAATGCATTTGGTATAAATGC
TCAGTTTCTCAATAGCACACTTAATNNNNNNNNNNAGCCTAAAAGCTGTC
TTCTACGGCATACTCCTAATGAACTGTAAGCCACAATCTCCATGAGTAGA
GCCTTGGCATTGTCTCTTTCGGTTACTGTTTTATCTTTGGAAAATTTCTC
TAACTTGAAAGATATTTTTGGTTTCGACAATTTCAGAGGAACCCAAGAAG
AGATCATTACTTCCATTGCCAGTGGAAAAAACACCTTTGTCATAATGCCT
ACTGGTGCAGGGAAGTCGTTATGTTACCAGCTACCAGCCATAAGCACATC
GGGTACTGCCATTGTTATAAGCCCCTTGATCGCTTTAATGAAAAACCAAG
TGGATCAGATGAATGCATTTGGTATAAATGCTCAGTTTCTCAATAGCACA
CTTAATCGCTCGGAGATGACACGAGTAAAAAACGATGTCCTAAGTGAAAC
CTGCAAGCTTCTATATATTGCACCCGAGTCTCTCACGAAGGAAGACAACC
TCAATTTTCTAAAAAAAGCAAATATCTCTTTTGTAGCTGTAGATGAAGCC
CACTGTATATCAGAATGGGGGCATGATTTCCGGCCAGAATATCGTAAAAT
CAGAAGTATTATTGAAAGCATTAATATTGATCTTCCTATAATTGCATTAA
CCGCCACAGCTACACCAAAGGTTCAACAGGATATTCAGAAAAACCTGAAT
ATGGATGACTCC
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Synonyms
The feature 'atp-dependent dna helicase' has the following synonyms
Synonym
Tk10666
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