wd repeat-containing protein partial, maker-scaffold30_size591359-snap-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wd repeat-containing protein partial vs. L. salmonis genes
Match: EMLSAG00000010329 (supercontig:LSalAtl2s:LSalAtl2s683:70354:76365:1 gene:EMLSAG00000010329 transcript:EMLSAT00000010329 description:"maker-LSalAtl2s683-augustus-gene-0.12") HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0 Identity = 276/431 (64.04%), Postives = 332/431 (77.03%), Query Frame = 0 Query: 34 DHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCD-AHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMN-KNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 + K+ DF+YYD + + E E P G VSCNF+DCL NRE G D FQ M L SEYGTRHML+NAML+ YP+ VP++NKVF SQWLS+RQVVFGTKCNKLMVYDVNTRHLDQIPSL SS ++ + GIH+I++NPSRTLLATGAKNT+DIA+YRLPTLDP+CVGE AH+DWIFD+ W+DDQF+VSGSRDGS++ WR+TD +I++V + IP+ +P+ K CK A RVRSLCYN R+QE LM+KKLPH++ENVCL+TDED+ MYAVGSKANTDLL ARTL AI+KI SR+NG GIRSVSFKGNILTIGTG+G++LFWDLRAGKFLESTMNSNRAV LKTS+GWL+RE + +N+ + +PA+YTHCYD SGTRLFAAGGPL S GNY+ L+Q Sbjct: 51 ESNKSADFVYYDDEDDSSSDYEGDEGFLPFGG-DSVSCNFADCLMNRELGLDRCGFQRMRLTSEYGTRHMLSNAMLRXYPLSVPDMNKVFSSQWLSYRQVVFGTKCNKLMVYDVNTRHLDQIPSLASSNSNNSSQSHCGIHSIQINPSRTLLATGAKNTHDIAVYRLPTLDPVCVGENAHEDWIFDIAWLDDQFLVSGSRDGSLALWRITDEMIQKVANSEIPSXLSXKPLSKKHCKSAQRVRSLCYNERSQE--------------------LMSKKLPHSVENVCLSTDEDSTMYAVGSKANTDLLXARTLXAIRKISSRHNGYGIRSVSFKGNILTIGTGLGMILFWDLRAGKFLESTMNSNRAVSLKTSKGWLRREEHYLHXEPLNVALRYSPAIYTHCYDISGTRLFAAGGPLESDAMGNYVGLFQ 460
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|81913124|sp|Q8BGZ3.1|DCA12_MOUSE (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 342.428 bits (877), Expect = 1.174e-112 Identity = 184/406 (45.32%), Postives = 245/406 (60.34%), Query Frame = 0 Query: 77 LRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQA-IKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMN---------SNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 L+NRE L Y + + ++LKE + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +AIYRLPTLDP+CVG+ HKDWIF + WI+D VSGSRDGS+ W VTD ++ + + +P Y I K + D +VR+L +N++ +E+ +SL+GY H W A +L++ KLP+ ENVCLA + +YAVGS+A+ LD R +K + SR G GIRSVSF +I+T+GTG G LLF+D+RA +FLE ++ + + L T RGWL + E + +++ AVYTHCYD SGT+LF AGGPLPSGL GNY L+ Sbjct: 50 LKNREVRLQNETSYSRLLHGYAAQQL--PSLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGRGWLNHD-ETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLW 452
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|74756352|sp|Q5T6F0.1|DCA12_HUMAN (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=Centrosome-related protein TCC52; AltName: Full=Testis cancer centrosome-related protein; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 340.117 bits (871), Expect = 7.465e-112 Identity = 177/377 (46.95%), Postives = 235/377 (62.33%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQA-IKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMN---------SNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 ++LKE + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +AIYRLPTLDP+CVG+ HKDWIF + WI D VSGSRDGS+ W VTD ++ + + +P Y I K + D +VR+L +N++ +E+ +SL+GY H W A +L++ KLP+ ENVCLA + +YAVGS+A+ LD R +K + SR G GIRSVSF +I+T+GTG G LLF+D+RA +FLE ++ + + L T +GWL + E + +++ AVYTHCYD SGT+LF AGGPLPSGL GNY L+ Sbjct: 77 SLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGKGWLNHD-ETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLW 452
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|75075386|sp|Q4R3J7.1|DCA12_MACFA (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 340.117 bits (871), Expect = 9.369e-112 Identity = 177/377 (46.95%), Postives = 234/377 (62.07%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQA-IKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMN---------SNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 ++LKE + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +AIYRLPTLDP+CVG+ HKDWIF + WI D VSGSRDGS+ W VTD ++ + + +P Y I K + D +VR+L +N + +E+ +SL+GY H W A +L++ KLP+ ENVCLA + +YAVGS+A+ LD R +K + SR G GIRSVSF +I+T+GTG G LLF+D+RA +FLE ++ + + L T +GWL + E + +++ AVYTHCYD SGT+LF AGGPLPSGL GNY L+ Sbjct: 77 SLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNSKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGKGWLNHD-ETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLW 452
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|158706501|sp|Q3MHH0.2|DCA12_BOVIN (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 338.191 bits (866), Expect = 5.704e-111 Identity = 176/377 (46.68%), Postives = 234/377 (62.07%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQA-IKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMN---------SNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 ++LKE + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +AIYRLPTLDP+CVG+ HKDWIF + WI D VSGSRDGS+ W VTD ++ + + +P Y I K + D +VR+L +N++ +E+ +SL+GY H W +L++ KLP+ ENVCLA + +YAVGS+A+ LD R +K + SR G GIRSVSF +I+T+GTG G LLF+D+RA +FLE ++ + + L T +GWL + E + +++ AVYTHCYD SGT+LF AGGPLPSGL GNY L+ Sbjct: 77 SLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGCVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYSHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKTENTLSKLLSTKLPYCRENVCLAYGNEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEEKLSACYGSKPKLAGENLKLTTGKGWLNHD-ETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLW 452
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|82237556|sp|Q6P809.1|DCA12_XENTR (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 337.421 bits (864), Expect = 9.072e-111 Identity = 177/375 (47.20%), Postives = 235/375 (62.67%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVT----QASIPTYKFIQPVRTKAC-KEAD-----RVRSLCYNHRTQEIAVISLNGYIHCWNA-LRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDART-LQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNR-------AVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 +L E + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E Q GIHAIE+NPSRTLLATG N N IA+YRLPTLDP+CVG+G H DWIF + WI D VSGSRDGS++ W +T+ ++ + + +P Y I K KE+ +VR+L +N + +E+ +SL+G+ H W A L +L++ KLP+ ENVCLA + +YAVGS+A+ LD R Q K + R G GIRSVSF +I+T+GTG G LLF+D+RA +FLE + S R + L T +GWL +E+ M+ +++ AVYTHCYD SGT+LF AGGPLP+GL GNY L+ Sbjct: 72 GILSEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPLSGSHQSCGIHAIEINPSRTLLATGGDNPNSIAVYRLPTLDPVCVGDGGHNDWIFSIAWISDTMAVSGSRDGSMALWEMTEEILSKSDFQHGLSRVPVYAHISHKALKDIPKESSNPVNCKVRALAFNSKNKELGAVSLDGFFHLWKAELTLAKLLSTKLPYCRENVCLAYGLEWSLYAVGSQAHVSFLDPRQPPQCAKSVYCREQGSGIRSVSFYEHIVTVGTGQGALLFYDIRAQRFLEDSTGSCRNSKYKGDLLKLSTGKGWLN-HNEMWMNYFSDIDCCPNAVYTHCYDSSGTKLFVAGGPLPTGLHGNYAGLW 445
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|82235576|sp|Q6AX81.1|DC12B_XENLA (RecName: Full=DDB1- and CUL4-associated factor 12-B; AltName: Full=WD repeat-containing protein 40A-B) HSP 1 Score: 335.88 bits (860), Expect = 2.548e-110 Identity = 176/371 (47.44%), Postives = 233/371 (62.80%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIE----EVTQASIPTYKFIQPVRTKAC-KEAD-----RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDART-LQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRA---VMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 +L E + N+NKVF SQWL+HRQVV GTKCN L V D+ T + +IP L+ E Q GIHAIE+NPSRTLLATG +N N IA+YRLPTLDP+CVG+G H DWIF + WI D VSGSRDG ++ W +TD ++ + + +P Y I K KE+ +VR+L +N +E+ +SL+G+ H W A + +L++ KLP ENVCLA + +YAVGS+A+ LD R Q K + R G GIRSVSF +I+T+GTG G LLF+D+RA +FLE S R + L T +GWL +E+ M+ +++ AVYTHCYD SGT+LF AGGPLP+GL GNY L+ Sbjct: 72 GILSEREFHLGNLNKVFASQWLNHRQVVCGTKCNTLFVVDIQTGQITKIPILKDREPISGSHQSCGIHAIEINPSRTLLATGGENPNSIAVYRLPTLDPVCVGDGGHNDWIFSIAWISDTMAVSGSRDGFMALWEMTDEVVNKRDFQHGLSRVPVYSHISHKALKDIPKESSNPVNCKVRALAFNGNNKELGAVSLDGFFHLWKAEQTLSKLLSTKLPFCRENVCLAYGLEWSLYAVGSQAHVSFLDPREPPQCAKSVYCREQGSGIRSVSFYEHIVTVGTGQGALLFYDIRAQRFLEDLTGSCREGDLLKLNTGKGWLN-HNEMWMNYFSDIDSCPNAVYTHCYDSSGTKLFVAGGPLPTGLHGNYAGLW 441
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|82231202|sp|Q5F3R7.1|DCA12_CHICK (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 333.569 bits (854), Expect = 1.464e-109 Identity = 174/377 (46.15%), Postives = 232/377 (61.54%), Query Frame = 0 Query: 108 LKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDART-LQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLES-----------TMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 LKE + +NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +AIYRLPTLDP+CVG+ HKDWIF + WI D VSGSRDGS+ W VT+ ++ + + +P Y I K + + +VR+L +N++ +E+ +SL+GY H W A +L++ KLP+ ENVCLA ++ +YAVGS+A+ LD R +K + S+ G GIRSVSF +I+T+GTG G LLF+D+RA +FL+ + + + L T +GWL + E + +N AVYTHCYD SGT+LF AGGPLPSGL GNY L+ Sbjct: 51 LKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGMVNQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTEDVLSKSDSRHNLSQVPVYAHITHRALKDIPKENTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAEHTLSKLLSTKLPYCRENVCLAYGQEWSVYAVGSQAHVSFLDPRQPSHNVKSVCSKERGSGIRSVSFYEHIITVGTGHGSLLFYDIRAQRFLDERPPRACYGQKQKLGGSEILKLTTGKGWLNHD-ETWRNYFSEINFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLW 426
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|82234085|sp|Q63ZP7.1|DC12A_XENLA (RecName: Full=DDB1- and CUL4-associated factor 12-A; AltName: Full=WD repeat-containing protein 40A-A) HSP 1 Score: 333.569 bits (854), Expect = 2.679e-109 Identity = 175/375 (46.67%), Postives = 234/375 (62.40%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVT----QASIPTYKFIQPVRTKAC-KEAD-----RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDART-LQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNR-------AVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 ++L E + N+NKVF SQWL+HRQVV GTKCN L V DV T + +IP L+ E Q GIHAIE+NPSRTLLATG N N IA+YRLPTLDP+CVG+G H DWIF + WI D VSGSRDGS+ W +TD ++ + + +P Y I K KE+ +VR+L +N +E+ +SL+G+ H W A + +L++ KLP+ ENVCLA + +YAVGS+A+ LD R K + R G GIRSVSF +I+T+GTG G LLF+D+RA +FLE + + R + L T +GWL +E+ ++ +++ AVYTHCYD SGT+LF AGGPLP+GL GNY L+ Sbjct: 72 SILSEREFHLGNLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITRIPILKDREPINGSHQSCGIHAIEINPSRTLLATGGDNPNSIAVYRLPTLDPVCVGDGGHNDWIFSIAWISDTMAVSGSRDGSMGLWEMTDEVVNKSDFQHGLSRVPVYSHISHKALKDIPKESSNPVNCKVRALAFNSNNKELGAVSLDGFFHLWKAEQTLSKLLSTKLPYCRENVCLAYGLEWSLYAVGSQAHVSFLDPRQPPHCAKSVYCREQGSGIRSVSFYEHIVTVGTGQGALLFYDIRAQRFLEDSTGNCRNAKKKGDTLKLSTGKGWLN-HNEMWLNYFSDIDCCPNAVYTHCYDSSGTKLFVAGGPLPTGLHGNYAGLW 445
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|123884285|sp|Q08BB3.1|DCA12_DANRE (RecName: Full=DDB1- and CUL4-associated factor 12; AltName: Full=WD repeat-containing protein 40A) HSP 1 Score: 313.153 bits (801), Expect = 6.573e-101 Identity = 175/401 (43.64%), Postives = 232/401 (57.86%), Query Frame = 0 Query: 106 AMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSEN------------------------SRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQ----ASIPTYKFIQPVRTKAC-KEAD-----RVRSLCYNHRTQEIAVISLNGYIHCWNAL-RFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDAR-TLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNS-----NRA----VMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 +L+E + +NKVF SQWL+HRQVV GTKCN L V DV + + +IP L+ E +Q GIHAIE+NPSRTLLATG N N +A+YRLPTLDP+CVG+ H DWIF + WI D VSGSRDGS+ W +++ ++ + + +P Y I K KE +VR+L +N+ +E+ +SL+GY H W A + ++ KLP+ ENVCLA D +YAVGS+A+ LD R + Q IK + SR G GIRSVSF +I+T+GTG G LLF+D+RA +FL+ ++ NR + L T RGWL + E ++ AVYTHCYDDSGT+LF AGGPL SGL GNY L+ Sbjct: 82 GILREREFSLGRLNKVFASQWLNHRQVVCGTKCNTLFVVDVLSGQITRIPMLKDREGRGEVSQGLGGVGSPFHFHNPGSVGGLDVQQGCGIHAIELNPSRTLLATGGDNPNSLAVYRLPTLDPVCVGDDGHNDWIFSIAWISDTMAVSGSRDGSMGLWEISEDVLSQAEKRQNVEGVPGYSHISHRALKDIPKEYTHPYNCKVRALAFNNSHKELGAVSLDGYFHLWKAEDNLSKELSTKLPYCKENVCLAYGLDWSVYAVGSQAHVSFLDPRQSSQNIKSVSSRERGSGIRSVSFYEHIVTVGTGQGSLLFYDIRAQRFLDGPSSTPGGYRNRTAEGILKLTTGRGWLNHD-ETWRSYFSDIRSFPNAVYTHCYDDSGTKLFVAGGPLCSGLHGNYAGLW 481
BLAST of wd repeat-containing protein partial vs. SwissProt
Match: gi|74756914|sp|Q5VW00.1|DC122_HUMAN (RecName: Full=DDB1- and CUL4-associated factor 12-like protein 2; AltName: Full=WD repeat-containing protein 40C) HSP 1 Score: 310.842 bits (795), Expect = 2.966e-100 Identity = 164/378 (43.39%), Postives = 235/378 (62.17%), Query Frame = 0 Query: 107 MLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENS-RPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGE-GAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSL----IEEVTQASIPTYKFIQPVRTKACKEAD------RVRSLCYNHRTQEIAVISLNGYIHCWNALR-FKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQA-IKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSN---------RAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALY 461 +L E + + +NKVF SQWL+ RQVV GTKCN L V DV + H+ +IP ++ E Q GIHAIE+NPS+TLLATG +N N +AIY+LPTLDP+C+G+ HKDWIF + W+ D VSGSRDG+++ WR+ + I ++ +P Y I+P +A A +VR+L ++ + QE+ +SL+GY H W A +L++ +LP+ ENVCL ++ +YAVGS+++ LD R Q I+ + SR G G+RS+SF +I+T+GTG G LLF+D+RA KFLE +S+ R + L RGWL ++ +V ++ M + A+YTHCY+ +LF AGGPLPSGL GNY L+ Sbjct: 86 LLTERQLDLGTLNKVFASQWLNARQVVCGTKCNTLFVVDVQSGHITRIPLMRDKEAGLAQAHQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPTLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDMFNGSIAWHSEVGLPVYAHIRPRDVEAIPRASTNPSNRKVRALAFSGKNQELGAVSLDGYFHLWKARSTLSRLLSIRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQHIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRGWLNQD-DVWVNYFGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLW 462
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|1325271072|ref|XP_023320141.1| (DDB1- and CUL4-associated factor 12-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0 Identity = 281/433 (64.90%), Postives = 348/433 (80.37%), Query Frame = 0 Query: 30 TSSRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 ++S K++DF+YYD + +A A E + + +SCNF DC+ NR+ G FQ M L+SEYGTRHML+N+MLKE+ + + N+NKVFCSQWLSH+QV+FGTKCNKL+V DV+T+ +D IPSLQSSE S PP+ E GI++IE+NPSRTLL+TGA N+ND+A+YRLPTLDPICVG+ HKDWIFD TWIDDQF+VSGSRDGSIS WRVTD +IEEVT+A IP ++++ P+ TK CK+AD+VR+LCYN QEIAVISLN +IHCWNA+ KQ+M+KKLPHT+EN CL TDE+ Q+YAVGSK++ DLLD+RTLQ+++KI SR++GCGIRSVSFKGNILT+GTG G+LLFWDLRA KFLESTMNSNRAV LK RGW++R M NK PA+YTHCYD SGTRLFAAGGPL + GNY+ LYQ Sbjct: 56 SASTQDNKSLDFIYYDDESEDEDAVAATENS------YDISCNFVDCMMNRQRGDHRKFQTMKLSSEYGTRHMLSNSMLKEHEIKIGNMNKVFCSQWLSHKQVIFGTKCNKLVVMDVSTKKIDHIPSLQSSETSVPPDLERGINSIEINPSRTLLSTGASNSNDVAVYRLPTLDPICVGQFGHKDWIFDQTWIDDQFLVSGSRDGSISLWRVTDQIIEEVTEADIPVHQYMSPLLTKKCKQADKVRALCYNGCAQEIAVISLNSFIHCWNAVTMKQIMSKKLPHTLENCCLTTDEEYQLYAVGSKSHADLLDSRTLQSVRKISSRSSGCGIRSVSFKGNILTLGTGTGLLLFWDLRACKFLESTMNSNRAVQLKAGRGWVERNDSFM--DAYQPNKYTPAIYTHCYDVSGTRLFAAGGPLQNQQMGNYVGLYQ 480
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|1325271075|ref|XP_023320143.1| (DDB1- and CUL4-associated factor 12-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0 Identity = 269/433 (62.12%), Postives = 335/433 (77.37%), Query Frame = 0 Query: 30 TSSRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 ++S K++DF+YYD + +A A E + + +SCNF DC+ NR+ G FQ M L+SEYGTRHML+N+MLKE+ + + N+NKVFCSQWLSH+QV+FGTKCNKL+V DV+T+ +D IPSLQSSE S PP+ E GI++IE+NPSRTLL+TGA N+ND+A+YRLPTLDPICVG+ HKDWIFD TWIDDQF+VSGSRDGSIS WRVTD +IEEVT+A IP ++++ P+ TK CK+AD+VR+LCYN QEIAVISLN +IHCWNA+ KQ+M+KKLPHT+EN CL TDE+ Q+YAVGSK++ DLLD+RTLQ+++KI SR++GCGIRSVSFKGNILT+GTG G+LLFWDLRA KFLESTMNSNRAV LK RGW++R M NK PA+YTHCYD GNY+ LYQ Sbjct: 56 SASTQDNKSLDFIYYDDESEDEDAVAATENS------YDISCNFVDCMMNRQRGDHRKFQTMKLSSEYGTRHMLSNSMLKEHEIKIGNMNKVFCSQWLSHKQVIFGTKCNKLVVMDVSTKKIDHIPSLQSSETSVPPDLERGINSIEINPSRTLLSTGASNSNDVAVYRLPTLDPICVGQFGHKDWIFDQTWIDDQFLVSGSRDGSISLWRVTDQIIEEVTEADIPVHQYMSPLLTKKCKQADKVRALCYNGCAQEIAVISLNSFIHCWNAVTMKQIMSKKLPHTLENCCLTTDEEYQLYAVGSKSHADLLDSRTLQSVRKISSRSSGCGIRSVSFKGNILTLGTGTGLLLFWDLRACKFLESTMNSNRAVQLKAGRGWVERNDSFM--DAYQPNKYTPAIYTHCYD------------------GNYVGLYQ 462
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|1330904903|gb|PNF28940.1| (DDB1- and CUL4-associated factor 12-B [Cryptotermes secundus]) HSP 1 Score: 506.908 bits (1304), Expect = 3.657e-175 Identity = 248/433 (57.27%), Postives = 315/433 (72.75%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENS--RPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 SR K DF+ Y+ S+ E E+ A + S NF D +R RE G +P + EYG+RH+L + M KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSLQ +S P +Q+ GIH++++NPS+TLLATGA+N+++IA+YRLPTLDP+CVGEGAH+DW+FDM W+DDQF+VSGSRD ++ WRV + I T+ +PTY ++ + K CK A +VR++ +N QEIA +SLNGYIH WNA FKQ +++KLP ENVCLA +DA MYAVG ++ T LLDARTLQA+KKI R +GCGIRS SF+GN+LTIGTGVGILLF+DLRAGK+LES++NS+R V LK S+GW+ + E + G K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 11 SRKPDKPEDFVCYEDSDDEEES------ASAEKQILNTSYNFVDFVRGREMGGR---EPKWVGPEYGSRHILTHEMFKEYSVSLSNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVVTQRLDQIPSLQGRRDSITMPQDQQCGIHSVQINPSKTLLATGARNSSEIAVYRLPTLDPVCVGEGAHRDWVFDMCWLDDQFLVSGSRDTRMALWRVQEDDI--ATKQEVPTYSHVRALAVKECKSAQKVRAVAFNKSFQEIAALSLNGYIHIWNAETFKQKLSRKLPSCQENVCLAV-QDAGMYAVGCRSYTLLLDARTLQAVKKISPRYSGCGIRSASFQGNVLTIGTGVGILLFYDLRAGKYLESSINSSRTVHLKASKGWVFPDEEYI--DGFQHIKYTPAIYTHCYDSSGTRLFTAGGPLPANLYGNYAGLWQ 429
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|1339048114|ref|XP_023712250.1| (DDB1- and CUL4-associated factor 12 [Cryptotermes secundus]) HSP 1 Score: 505.753 bits (1301), Expect = 3.328e-174 Identity = 248/433 (57.27%), Postives = 315/433 (72.75%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENS--RPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 SR K DF+ Y+ S+ E E+ A + S NF D +R RE G +P + EYG+RH+L + M KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSLQ +S P +Q+ GIH++++NPS+TLLATGA+N+++IA+YRLPTLDP+CVGEGAH+DW+FDM W+DDQF+VSGSRD ++ WRV + I T+ +PTY ++ + K CK A +VR++ +N QEIA +SLNGYIH WNA FKQ +++KLP ENVCLA +DA MYAVG ++ T LLDARTLQA+KKI R +GCGIRS SF+GN+LTIGTGVGILLF+DLRAGK+LES++NS+R V LK S+GW+ + E + G K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 SRKPDKPEDFVCYEDSDDEEES------ASAEKQILNTSYNFVDFVRGREMGGR---EPKWVGPEYGSRHILTHEMFKEYSVSLSNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVVTQRLDQIPSLQGRRDSITMPQDQQCGIHSVQINPSKTLLATGARNSSEIAVYRLPTLDPVCVGEGAHRDWVFDMCWLDDQFLVSGSRDTRMALWRVQEDDI--ATKQEVPTYSHVRALAVKECKSAQKVRAVAFNKSFQEIAALSLNGYIHIWNAETFKQKLSRKLPSCQENVCLAV-QDAGMYAVGCRSYTLLLDARTLQAVKKISPRYSGCGIRSASFQGNVLTIGTGVGILLFYDLRAGKYLESSINSSRTVHLKASKGWVFPDEEYI--DGFQHIKYTPAIYTHCYDSSGTRLFTAGGPLPANLYGNYAGLWQ 455
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|1227954976|ref|XP_021912996.1| (DDB1- and CUL4-associated factor 12 isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 503.056 bits (1294), Expect = 2.920e-173 Identity = 247/433 (57.04%), Postives = 316/433 (72.98%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENS--RPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 SR K DF+ Y+ S+ E E+ A + + S NF D +R RE G +P + EYG+RH+L + M KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSLQ +S P +Q+ GIH++++NPS+TLLATGA+N+++IA+YRLPTLDP+CVGEGAH+DW+FDM W+DDQF+VSGSRD ++ WRV + + T+ +PTY ++ + K CK A +VR++ +N QEIA +SLNGYIH WNA FKQ +++KLP ENVCLA +DA MYAVG ++ T LLDARTLQA+KKI R +GCGIRS SF+GN+LTIGTGVGILLF+DLRAGK+LES++NS+R V LK S+GW+ + E + G K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 SRKPDKPEDFVCYEDSDDEEESAVAEKQ------VLNTSYNFVDFVRGREMGGR---EPKWVGPEYGSRHILTHEMFKEYSVSLSNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVVTQKLDQIPSLQGRRDSITLPQDQQCGIHSVQINPSKTLLATGARNSSEIAVYRLPTLDPVCVGEGAHRDWVFDMCWLDDQFLVSGSRDTRMALWRVQED--DMTTKQEVPTYNHLRALAVKECKSAQKVRAVAFNKSFQEIAALSLNGYIHIWNAETFKQKLSRKLPSCQENVCLAV-QDAGMYAVGCRSYTLLLDARTLQAVKKISPRYSGCGIRSASFQGNVLTIGTGVGILLFYDLRAGKYLESSINSSRTVHLKASKGWVFPDEEYI--DGFQHIKYTPAIYTHCYDSSGTRLFTAGGPLPANLYGNYAGLWQ 455
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|646724190|gb|KDR24525.1| (WD repeat-containing protein 40A, partial [Zootermopsis nevadensis]) HSP 1 Score: 503.056 bits (1294), Expect = 3.277e-173 Identity = 247/433 (57.04%), Postives = 316/433 (72.98%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENS--RPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 SR K DF+ Y+ S+ E E+ A + + S NF D +R RE G +P + EYG+RH+L + M KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSLQ +S P +Q+ GIH++++NPS+TLLATGA+N+++IA+YRLPTLDP+CVGEGAH+DW+FDM W+DDQF+VSGSRD ++ WRV + + T+ +PTY ++ + K CK A +VR++ +N QEIA +SLNGYIH WNA FKQ +++KLP ENVCLA +DA MYAVG ++ T LLDARTLQA+KKI R +GCGIRS SF+GN+LTIGTGVGILLF+DLRAGK+LES++NS+R V LK S+GW+ + E + G K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 40 SRKPDKPEDFVCYEDSDDEEESAVAEKQ------VLNTSYNFVDFVRGREMGGR---EPKWVGPEYGSRHILTHEMFKEYSVSLSNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVVTQKLDQIPSLQGRRDSITLPQDQQCGIHSVQINPSKTLLATGARNSSEIAVYRLPTLDPVCVGEGAHRDWVFDMCWLDDQFLVSGSRDTRMALWRVQED--DMTTKQEVPTYNHLRALAVKECKSAQKVRAVAFNKSFQEIAALSLNGYIHIWNAETFKQKLSRKLPSCQENVCLAV-QDAGMYAVGCRSYTLLLDARTLQAVKKISPRYSGCGIRSASFQGNVLTIGTGVGILLFYDLRAGKYLESSINSSRTVHLKASKGWVFPDEEYI--DGFQHIKYTPAIYTHCYDSSGTRLFTAGGPLPANLYGNYAGLWQ 458
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|749734029|ref|XP_011149143.1| (PREDICTED: DDB1- and CUL4-associated factor 12 [Harpegnathos saltator] >gi|749734031|ref|XP_011149153.1| PREDICTED: DDB1- and CUL4-associated factor 12 [Harpegnathos saltator] >gi|749734033|ref|XP_011149162.1| PREDICTED: DDB1- and CUL4-associated factor 12 [Harpegnathos saltator] >gi|307213544|gb|EFN88953.1| WD repeat-containing protein 40A [Harpegnathos saltator]) HSP 1 Score: 494.582 bits (1272), Expect = 8.642e-170 Identity = 241/434 (55.53%), Postives = 317/434 (73.04%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQ---SSENSRPPEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 +R K DF+ Y+SS+ EAE G+ R S NF D +R RE+ + + EYG+RH+L + + KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSL S S PEQ+ GIH++++NPSRTLL+TGA+++N+IAIYRLPTLDP+CVGE H+DW+FDM W+DD+F+VSGSRD ++ WR+ L E +A +PT++ IQPV K CK A +VR+L +N +EIA ++LN YIH W+A FKQ +++KLP ENVCLA +D +YA+G ++ T LLDARTLQ IKKIPSR +GCGIRS SF+G++LTIGTG+G+L+F+D+RA K+LES++NSNR V+LK S+G++ + E +DG N+ K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 NRKPDKPDDFVCYESSDDEAETVTEGKQ------FLRTSFNFVDYVRARETNTR---EVRKINQEYGSRHILTHDLFKEYSVSLNNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVATQKLDQIPSLHGRLSQGGSVVPEQQCGIHSVQINPSRTLLSTGARSSNEIAIYRLPTLDPVCVGETGHRDWVFDMCWLDDEFLVSGSRDTKMALWRIDSDLAEAPDKADVPTHRLIQPVCVKECKSAQKVRALAFNKAYKEIAALTLNSYIHIWSAESFKQKISRKLPACQENVCLAVQDDG-VYAIGCRSYTLLLDARTLQPIKKIPSRYSGCGIRSASFQGSVLTIGTGLGMLMFYDVRAQKYLESSINSNRTVVLKASKGYVFPDEE-YIDGFQNV-KYTPAIYTHCYDASGTRLFTAGGPLPANLYGNYAGLWQ 458
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|815797974|ref|XP_012219656.1| (PREDICTED: DDB1- and CUL4-associated factor 12 [Linepithema humile] >gi|815797976|ref|XP_012219657.1| PREDICTED: DDB1- and CUL4-associated factor 12 [Linepithema humile]) HSP 1 Score: 494.582 bits (1272), Expect = 8.753e-170 Identity = 241/435 (55.40%), Postives = 319/435 (73.33%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRP----PEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 +R K DF+ Y+SS+ E E G+ R S NF D +R RE+ + H + + EYG+RH+L + + KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSL + S PEQ+ GIH++++NPSRTLL+TGA+N+N+IAIYRLPTLDP+CVGEG H+DW+FDM W+DD+F+VSGSRD ++ WR+ L E +A +PT++ IQPV K CK A +VR+L +N +EIA ++LN +IH W+A FKQ +++KLP ENVCLA +D +YA+G ++ T LLDARTLQ IKKIPSR +GCGIRS SF+G++LTIGTG+G+L+F+D+RA K+LES++NSNR V+LK S+G++ + E +DG N+ K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 NRKPDKPDDFVCYESSDDETETVIEGKQ------FLRTSFNFVDYVRARET--NTH-EVRKINQEYGSRHILTHDLFKEYSVSLNNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVATQKLDQIPSLHGRQLSPGGNVMPEQQCGIHSVQINPSRTLLSTGARNSNEIAIYRLPTLDPVCVGEGGHRDWVFDMCWLDDEFLVSGSRDTKMALWRIDSDLAESPDKADVPTHRLIQPVCVKECKSAQKVRALAFNKAYKEIAALTLNSFIHIWSAESFKQKISRKLPACQENVCLAVQDDG-VYAIGCRSYTLLLDARTLQPIKKIPSRYSGCGIRSASFQGSVLTIGTGLGMLMFYDVRAQKYLESSINSNRTVVLKASKGYVFPDEE-YIDGFQNV-KYTPAIYTHCYDASGTRLFTAGGPLPANLYGNYAGLWQ 459
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|998497501|ref|XP_015524523.1| (PREDICTED: DDB1- and CUL4-associated factor 12 [Neodiprion lecontei]) HSP 1 Score: 494.197 bits (1271), Expect = 1.268e-169 Identity = 241/435 (55.40%), Postives = 316/435 (72.64%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRP----PEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 +R K DF+ Y+SS+ E E G+ R S NF D +R RE+ + + EYG+RH+L + + KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSL + + PEQ+ GIH++++NPSRTLL+TGA+N+N+IAIYRLPTLDP+CVGEG H+DW+FDM W+DD+F+VSGSRD +S WR+ L + +A IPT++ IQPV K C+ A +VR+L +N +EIA +SLN +IH W+A FKQ +++KLP ENVCLA +D +YAVG ++ T LLDARTLQ IKKIPSR +GCGIRS SF+ ++LTIGTG+G+L+F+D+RA K+LES++NSNR V+LK S+G++ + E MDG N+ K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 NRKPEKPEDFVCYESSDEEEETVTEGKQ------YLRTSFNFVDYVRARETNLK---EVRKINQEYGSRHILTHDLFKEYSVSLNNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVATQKLDQIPSLHGRQTNPAGAAIPEQQCGIHSVQINPSRTLLSTGARNSNEIAIYRLPTLDPVCVGEGGHRDWVFDMCWLDDEFLVSGSRDTKMSLWRIDSDLADAPDKAEIPTHRLIQPVCVKECRSAQKVRALAFNKAYKEIAALSLNSFIHIWSAETFKQKISRKLPACQENVCLAVQDDG-VYAVGCRSYTLLLDARTLQPIKKIPSRYSGCGIRSASFQRSVLTIGTGLGMLMFYDVRAQKYLESSINSNRTVVLKASKGYVFPDEE-YMDGFQNV-KYTPAIYTHCYDASGTRLFTAGGPLPANLYGNYAGLWQ 459
BLAST of wd repeat-containing protein partial vs. nr
Match: gi|780643112|ref|XP_011688495.1| (PREDICTED: DDB1- and CUL4-associated factor 12 [Wasmannia auropunctata]) HSP 1 Score: 494.197 bits (1271), Expect = 1.399e-169 Identity = 240/435 (55.17%), Postives = 318/435 (73.10%), Query Frame = 0 Query: 32 SRDHTKTVDFMYYDSSESEAEADEAGEAADPASGLFRVSCNFSDCLRNRESGCDAHFQPMSLASEYGTRHMLANAMLKEYPVPVPNVNKVFCSQWLSHRQVVFGTKCNKLMVYDVNTRHLDQIPSLQSSENSRP----PEQESGIHAIEMNPSRTLLATGAKNTNDIAIYRLPTLDPICVGEGAHKDWIFDMTWIDDQFVVSGSRDGSISFWRVTDSLIEEVTQASIPTYKFIQPVRTKACKEADRVRSLCYNHRTQEIAVISLNGYIHCWNALRFKQLMTKKLPHTMENVCLATDEDAQMYAVGSKANTDLLDARTLQAIKKIPSRNNGCGIRSVSFKGNILTIGTGVGILLFWDLRAGKFLESTMNSNRAVMLKTSRGWLQREHEVMMDGGVNMNKNAPAVYTHCYDDSGTRLFAAGGPLPSGLRGNYIALYQ 462 +R K DF+ Y+SS+ EAE G+ R S NF D +R RE+ + ++ EYG+RH+L + + KEY V + N+NKVFCSQWLS RQVVFGTKCNKLMVYDV T+ LDQIPSL + S PEQ+ GIH++++NPSRTLL+TGA+N+N+IAIYRLPTLDP+CVGE H+DW+FDM W+DD+F+VSGSRD ++ WR+ L E +A +PT++ IQPV K CK A +VR+L +N +EIA ++LN +IH W+A FKQ +++KLP ENVCLA +D +YA+G ++ T LLDARTLQ IKKIPSR +GCGIRS SF+G++LTIGTG+G+L+F+D+RA K+LES++NSNR V+LK S+G++ + E +DG N+ K PA+YTHCYD SGTRLF AGGPLP+ L GNY L+Q Sbjct: 37 NRKPDKPDDFVCYESSDDEAETVTEGKQ------FLRTSFNFVDYVRARETNTR---EVRNINQEYGSRHILTHDLFKEYSVSLNNMNKVFCSQWLSDRQVVFGTKCNKLMVYDVATQKLDQIPSLHGRQLSPGGNVMPEQQCGIHSVQINPSRTLLSTGARNSNEIAIYRLPTLDPVCVGESGHRDWVFDMCWLDDEFLVSGSRDTKMALWRIDSDLAEAPDKADVPTHRLIQPVCVKECKSAQKVRALAFNKAYKEIAALTLNSFIHIWSAESFKQKISRKLPACQENVCLAVQDDG-VYAIGCRSYTLLLDARTLQPIKKIPSRYSGCGIRSASFQGSVLTIGTGLGMLMFYDVRAQKYLESSINSNRTVVLKASKGYVFPDEE-YIDGFQNV-KYTPAIYTHCYDASGTRLFTAGGPLPANLYGNYAGLWQ 459 The following BLAST results are available for this feature:
BLAST of wd repeat-containing protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of wd repeat-containing protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 13
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BLAST of wd repeat-containing protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold30_size591359:104622..111048+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold30_size591359-snap-gene-1.16 ID=maker-scaffold30_size591359-snap-gene-1.16|Name=wd repeat-containing protein partial|organism=Tigriopus kingsejongensis|type=gene|length=6427bp|location=Sequence derived from alignment at scaffold30_size591359:104622..111048+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wd repeat-containing protein partial' has the following synonyms
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