abc transporter, maker-scaffold312_size212576-snap-gene-0.16 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	maker-scaffold312_size212576-snap-gene-0.16
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5")

HSP 1 Score: 59.6918 bits (143), Expect = 6.810e-11
Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = 0

Query:   13 LNVPPEQRNIGMIFQDYALFPHLTVAENVSFG--LTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIF--KEQGVTAIFVTHSREEA 140
            L VP   R IG + QD AL+  LT+ E + F   L     + + +R + ++ +++L     R    +SGGQ++R+++A AL  +P+LL+LDEP   +D  +R  +   +  I     +  T I  TH  EEA
Sbjct:   95 LEVP--GRRIGYMPQDLALYMELTILETLFFYGRLNKMQTSKIRSRAETLIEILELPH-SGRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHLLTIVNNSSKKRTIIITTHYVEEA 223

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1")

HSP 1 Score: 58.151 bits (139), Expect = 2.207e-10
Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVS-FGLTCWTKTD-VTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEA 140
            +T+ G    D  + +P  +  IG + Q+ AL+   TV E +  FG     +TD +  R+  +L  +++   +     +LSGGQ++RV+ A AL   P+L +LDEP   +D ++R S+   +  +   +  T +  TH  EEA
Sbjct:   87 VTVFGGSPGDKGIGIPGNR--IGYMPQEIALYKEFTVRETLKYFGRLYEMETDQIDQRIDFILKFLQIT-RDRDMVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKKTILITTHYIEEA 225

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6")

HSP 1 Score: 55.0694 bits (131), Expect = 1.425e-9
Identity = 40/132 (30.30%), Postives = 69/132 (52.27%), Query Frame = 0

Query:   13 LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWT--KTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKE--QGVTAIFVTHSREEA 140
            L VP   + +G + QD A++  LT+ E + F    +   K  +  R + ++ L++L   +     +LSGG Q+R ++A AL  +PDLL+LDEP   +D  +R ++   +  I     +  T +  TH  +EA
Sbjct:   99 LGVP--GKRVGYMPQDLAMYMELTIMETLEFYGRIFNMPKAKIKKRAKFLVELLELPK-KKILIQKLSGGHQRRASLAVALLHEPDLLILDEPTVGVDPVLRRNIWGHLVDICNNPIRKTTIVVTTHYVDEA 227

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 53.5286 bits (127), Expect = 8.920e-9
Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 0

Query:   19 QRNIGMIFQDYALFPHLTVAENVSFGL-----------TCWTKT--DVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQ---VRHSLIKEIRKIFKEQGVTAIFVTH 135
            + +IG++ Q+  LF + ++ EN++ GL           TC      D   R+ +     K + +       LSGGQ+QR+AIARAL   P +LLLDE  S +D+Q   +  S + + RK     G T I V H
Sbjct:  320 RSHIGIVGQEPVLFEY-SIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPK-----KYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARK-----GRTTIIVAH 441

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 49.6766 bits (117), Expect = 1.904e-7
Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 0

Query:   22 IGMIFQDYALFPHLTVAENVSFGLTCWTKTDV--TARVQEMLMLVKL--EGLESRYPHQ---LSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAI 164
            IG I Q+  LF   +V EN+ +G    T  +V   A+   +   V+   +G  +    +   +SGGQ+QR+AIARAL   P +L+LDE  S +D +    + + + K+ K  G T++ + H R      AD +A   K + + + T AA+
Sbjct:  513 IGYINQEPVLFAT-SVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSK--GRTSLVIAH-RLSTIKNADVIAVIDKGVMAEIGTHAAL 658

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 48.521 bits (114), Expect = 3.908e-7
Identity = 36/129 (27.91%), Postives = 65/129 (50.39%), Query Frame = 0

Query:   19 QRNIGMIFQDYALFPHLTVAENVSFG-LTCWTKTDVTARVQEMLMLVKLEGLESRYPH-----------QLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTH 135
            +R I ++ QD  LF   T+  N+ +G L C  +      V ++  L +++     +P            +LSGG++QRVAIARA      +++ DE  S++D+     ++K ++++    G TAI + H
Sbjct:  437 RRQISIVPQDCVLFND-TIFHNIKYGNLNCSDED-----VYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRV--TSGKTAIIIAH 557

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 48.9062 bits (115), Expect = 3.908e-7
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0

Query:   76 QLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQV-RH---SLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKL 147
             LSGGQ+QRV++ARA+    D+ LLD+P S +D+ V +H   ++I     I K++  T + VTH       F DK+
Sbjct:  760 NLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDK--TRVMVTHG-VTYLPFTDKI 832

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 48.521 bits (114), Expect = 4.245e-7
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0

Query:   76 QLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKE-IRKIFKEQGVTAIFVTHS 136
             LSGGQ+QR+++ARA+  + D+  LD+P + +D+ V   L +E I      +G T I VTH+
Sbjct: 1273 NLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHN 1334

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000012458 (supercontig:LSalAtl2s:LSalAtl2s917:121539:129683:-1 gene:EMLSAG00000012458 transcript:EMLSAT00000012458 description:"maker-LSalAtl2s917-augustus-gene-1.21")

HSP 1 Score: 48.1358 bits (113), Expect = 5.345e-7
Identity = 25/70 (35.71%), Postives = 44/70 (62.86%), Query Frame = 0

Query:   69 LESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSRE 138
            ++++     SGG + R+A+ARAL  KP LLLLDEP +++D +    L +E+RK  +      + ++HS++
Sbjct:  229 MQAKACKDYSGGWRMRIALARALFIKPHLLLLDEPTNHLDLEACVWLEEELRKYNR----ILVLISHSQD 294

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2")

HSP 1 Score: 47.7506 bits (112), Expect = 7.449e-7
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0

Query:   77 LSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKE-IRKIFKEQGVTAIFVTHSREEAFAFADKLAA 149
            LSGGQ+QR+AIAR L  K     +D PFS++D+++   + +E + KI  ++  T +F+T  R +    AD + A
Sbjct:  854 LSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRT-VFLTTERLDFLHRADHIVA 926

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BLAST of abc transporter vs. SwissProt
Match: gi|60389823|sp|Q6D2F6.1|FBPC2_PECAS (RecName: Full=Fe(3+) ions import ATP-binding protein FbpC 2)

HSP 1 Score: 144.821 bits (364), Expect = 6.433e-41
Identity = 70/148 (47.30%), Postives = 103/148 (69.59%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEG-LESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKL 147
            +T+NG+ + D+  +VP  QR IG + QD ALFPHL +A+N++FGL   +K +   RV E++ LV L   L+   PH++SGGQQQRVA+ARALA +P L+LLDEPFS +DT +R +  K +  + ++  V +I VTH + EA +FAD++
Sbjct:   58 ITLNGQTLCDNGFSVPAHQRRIGYVPQDGALFPHLCIADNIAFGLK-GSKAEKQKRVDELMALVSLPTHLQKHSPHEISGGQQQRVALARALAQRPALMLLDEPFSALDTGLRAATRKAVMDVLQQANVASILVTHDQGEALSFADRV 204

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BLAST of abc transporter vs. SwissProt
Match: gi|123386797|sp|Q1QE80.1|POTA_PSYCK (RecName: Full=Spermidine/putrescine import ATP-binding protein PotA)

HSP 1 Score: 145.976 bits (367), Expect = 6.436e-41
Identity = 73/166 (43.98%), Postives = 109/166 (65.66%), Query Frame = 0

Query:   14 NVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCW--TKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAIVTTNDDVFDLKHI 177
             +P ++R +  +FQ YALFPH+TVA+NV++GL      K ++  RV+EML +V+LE L +R P  LSGGQQQRVAIARA+  +P LLLLDEP S +D ++R  +  E++++ +E G+T +FVTH +EEA + +D++A         + T   I  T  ++F  K I
Sbjct:   87 GLPADKRPVNTVFQQYALFPHMTVAQNVAYGLKLRKVPKVEIQTRVREMLAMVQLEHLANRRPQDLSGGQQQRVAIARAVINRPKLLLLDEPLSALDHKLRLQMQSELKRLQRELGITFVFVTHDQEEALSMSDRIAVMKDGRFQQIGTPIEIYETPANLFTAKFI 252

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BLAST of abc transporter vs. SwissProt
Match: gi|81544970|sp|Q9KS33.1|POTA_VIBCH (RecName: Full=Spermidine/putrescine import ATP-binding protein PotA)

HSP 1 Score: 145.591 bits (366), Expect = 7.304e-41
Identity = 70/148 (47.30%), Postives = 104/148 (70.27%), Query Frame = 0

Query:    4 NGRPIVDDQ--LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWT--KTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKL 147
             G+ ++DDQ    VP EQR++  +FQ YALFPH+TV ENV+FGL      ++++  RV E L +V+L  +  R PHQLSGGQQQR+AIARA+  KP +LLLDE  S +D ++R  +  E++++ ++ G+T IFVTH +EEA + +D++
Sbjct:   71 QGQILLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQLGITFIFVTHDQEEALSMSDRI 218

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BLAST of abc transporter vs. SwissProt
Match: gi|56748747|sp|Q7NWX3.1|CYSA2_CHRVO (RecName: Full=Sulfate/thiosulfate import ATP-binding protein CysA 2; AltName: Full=Sulfate-transporting ATPase 2)

HSP 1 Score: 144.821 bits (364), Expect = 9.018e-41
Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 0

Query:   17 PEQRNIGMIFQDYALFPHLTVAENVSFGLTCWT-KTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKL 147
            P +R+ G++FQ YALFP+LTVA+N+++GLT    K     RV+E+L +V L G E +YP QLSGGQQQRVA+ARALA  P LLLLDEP S +D +VR  L +E++ + +  GVT + VTH +EEA + AD++
Sbjct:   82 PAKRDYGIVFQSYALFPNLTVADNIAYGLTPRRDKAGHAHRVRELLDMVGLPGSEGKYPSQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVRDKLREELKGLQRRLGVTTMMVTHDQEEALSIADRV 213

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BLAST of abc transporter vs. SwissProt
Match: gi|34222612|sp|Q8Z0H0.1|CYSA_NOSS1 (RecName: Full=Sulfate/thiosulfate import ATP-binding protein CysA; AltName: Full=Sulfate-transporting ATPase)

HSP 1 Score: 144.05 bits (362), Expect = 1.079e-40
Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 0

Query:    4 NGRPIV--DDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTC--WTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAI 164
            +GR I+   D  N   ++RNIG +FQ YALF HLTV +N++FGL         V  RV+++L LV+L GL  RYP QLSGGQ+QRVA+ARALA +P +LLLDEPF  +D +VR  L   +R++  E  VT +FVTH +EEA   +D++    +     V T A I
Sbjct:   56 DGRIILTGKDATNQSVQERNIGFVFQHYALFKHLTVRQNIAFGLEIRKAPANKVKGRVEQLLELVQLSGLGDRYPSQLSGGQRQRVALARALAVEPSVLLLDEPFGALDAKVRKDLRAWLRRLHDEVHVTTVFVTHDQEEAMEVSDEVVVMNQGRVEQVGTPAEI 220

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BLAST of abc transporter vs. nr
Match: gi|515572691|ref|WP_017005484.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1067409005|gb|OEE82702.1| ABC transporter [Enterovibrio norvegicus FF-162])

HSP 1 Score: 303.138 bits (775), Expect = 2.393e-100
Identity = 153/192 (79.69%), Postives = 160/192 (83.33%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAIVTTNDDVFDLKHIHGVLDDGEAIQISMN 192
            MTINGRPIVDD LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLT WTK DVTARVQEML+LVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V       TT       + +   L  G  + +S+N
Sbjct:   61 MTINGRPIVDDHLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTGWTKADVTARVQEMLVLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNHGVIEQYGNATTLYYQPSSRFVADFLGHGSYVPVSLN 248

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BLAST of abc transporter vs. nr
Match: gi|515527483|ref|WP_016960715.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1067382219|gb|OEE57884.1| ABC transporter [Enterovibrio norvegicus FF-454])

HSP 1 Score: 297.745 bits (761), Expect = 3.286e-98
Identity = 150/192 (78.12%), Postives = 158/192 (82.29%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAIVTTNDDVFDLKHIHGVLDDGEAIQISMN 192
            MTINGRPIVDD LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGL+ W K DV ARVQEML+LVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V       TT       + +   L  G  + +S+N
Sbjct:   61 MTINGRPIVDDHLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLSGWKKADVMARVQEMLVLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNHGVIEQYGNATTLYYQPSSRFVADFLGHGSYVPVSLN 248

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BLAST of abc transporter vs. nr
Match: gi|515572271|ref|WP_017005067.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1067395491|gb|OEE70522.1| ABC transporter [Enterovibrio norvegicus FF-33])

HSP 1 Score: 296.59 bits (758), Expect = 8.680e-98
Identity = 149/192 (77.60%), Postives = 158/192 (82.29%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAIVTTNDDVFDLKHIHGVLDDGEAIQISMN 192
            MTINGRPI+DD LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGL+ W K DV ARVQEML+LVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V       TT       + +   L  G  + +S+N
Sbjct:   61 MTINGRPIMDDHLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLSGWKKADVMARVQEMLVLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNHGVIEQYGNATTLYYQPSSRFVADFLGHGSYVPVSLN 248

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BLAST of abc transporter vs. nr
Match: gi|654555662|ref|WP_028023056.1| (ABC transporter ATP-binding protein [Enterovibrio calviensis])

HSP 1 Score: 275.789 bits (704), Expect = 1.743e-89
Identity = 130/148 (87.84%), Postives = 134/148 (90.54%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA 148
            M INGR IVD+  N+PPE RN+GMIFQDYALFPHLTV ENVSFGLT W K  V ARV EML LVKL+GLE RYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA
Sbjct:   61 MNINGRKIVDEAFNMPPEHRNVGMIFQDYALFPHLTVGENVSFGLTGWDKASVVARVNEMLALVKLDGLEGRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA 208

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BLAST of abc transporter vs. nr
Match: gi|1154843026|ref|WP_078750846.1| (ABC transporter ATP-binding protein [Enterovibrio nigricans] >gi|1152209008|emb|SKA45149.1| iron(III) transport system ATP-binding protein [Enterovibrio nigricans DSM 22720] >gi|1304760739|gb|PKF51451.1| ABC transporter ATP-binding protein [Enterovibrio nigricans])

HSP 1 Score: 271.937 bits (694), Expect = 4.892e-88
Identity = 133/158 (84.18%), Postives = 139/158 (87.97%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSV 158
            M+INGR I+DD++NVPPEQR IGMIFQDYALFPHLTVAENVSFGL  W K  V  RV EML LVKL+GLE RYPHQLSGGQQQRVAIARALA KPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V
Sbjct:   61 MSINGRAIIDDKMNVPPEQRKIGMIFQDYALFPHLTVAENVSFGLKEWDKAAVAQRVSEMLALVKLDGLEKRYPHQLSGGQQQRVAIARALASKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNQGV 214

[Close]

BLAST of abc transporter vs. nr
Match: gi|515575307|ref|WP_017008081.1| (MULTISPECIES: ABC transporter ATP-binding protein [Enterovibrio] >gi|1067390555|gb|OEE65692.1| ABC transporter [Enterovibrio calviensis FF-85] >gi|1067488822|gb|OEF57603.1| ABC transporter [Enterovibrio calviensis 1F-211] >gi|1067492516|gb|OEF61126.1| ABC transporter [Enterovibrio calviensis 1F-230] >gi|1098365712|emb|SFQ14440.1| iron(III) transport system ATP-binding protein [Enterovibrio norvegicus DSM 15893] >gi|1326572866|gb|PMH67122.1| ABC transporter [Enterovibrio norvegicus] >gi|1326642923|gb|PMI31679.1| ABC transporter [Enterovibrio norvegicus] >gi|1326648843|gb|PMI37269.1| ABC transporter [Enterovibrio norvegicus] >gi|1327181073|gb|PMN45999.1| ABC transporter [Enterovibrio norvegicus] >gi|1327229307|gb|PMN92983.1| ABC transporter [Enterovibrio norvegicus])

HSP 1 Score: 271.937 bits (694), Expect = 5.637e-88
Identity = 136/192 (70.83%), Postives = 153/192 (79.69%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSVNTTAAIVTTNDDVFDLKHIHGVLDDGEAIQISMN 192
            MTINGR I+D++ NVPPE RN+GMIFQDYALFPHLTV ENV+FGLT W K+ VTARV+EML LVKL+GLE+RYPHQLSGGQQQRVAIARALA KPDLLLLDEPFSNIDTQVRHSLI+EIRKIFK+QGVTAIFVTHSREEAFAFADKLA    V+N  V       T        + +   L  G  + +S+N
Sbjct:   61 MTINGRKIIDEKCNVPPELRNVGMIFQDYALFPHLTVGENVAFGLTGWDKSHVTARVKEMLSLVKLDGLENRYPHQLSGGQQQRVAIARALASKPDLLLLDEPFSNIDTQVRHSLIQEIRKIFKQQGVTAIFVTHSREEAFAFADKLA----VMNQGVIEQYGSATDLYYCPSSRFVADFLGHGSYVPVSLN 248

[Close]

BLAST of abc transporter vs. nr
Match: gi|488493983|ref|WP_002537427.1| (MULTISPECIES: ABC transporter ATP-binding protein [Grimontia] >gi|486373628|gb|EOD80486.1| Ferric iron ABC transporter, ATP-binding protein [Grimontia indica] >gi|808151914|gb|KKD60366.1| ABC transporter [Grimontia sp. AD028])

HSP 1 Score: 269.24 bits (687), Expect = 5.037e-87
Identity = 135/158 (85.44%), Postives = 137/158 (86.71%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSV 158
            M IN R IV   LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGL  W K    ARVQEML LVKL+GLESRYPHQLSGGQQQRVAIARALA KPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V
Sbjct:   61 MMINCRQIVGPSLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLKGWDKLATNARVQEMLALVKLDGLESRYPHQLSGGQQQRVAIARALAGKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNKGV 214

[Close]

BLAST of abc transporter vs. nr
Match: gi|1330119670|ref|WP_102318500.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1327007146|gb|PML77569.1| ABC transporter [Enterovibrio norvegicus] >gi|1327204236|gb|PMN68559.1| ABC transporter [Enterovibrio norvegicus])

HSP 1 Score: 269.24 bits (687), Expect = 5.996e-87
Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSV 158
            MTINGR I+D++ NVPPE RN+GMIFQDYALFPHLTV ENV+FGLT W K+ +T RV+EML LVKL+GLE+RYPHQLSGGQQQRVAIARALA KPDLLLLDEPFSNIDTQVRHSLI+EIRKIFK+QGVTAIFVTHSREEAFAFADKLA    V+N  V
Sbjct:   61 MTINGRKIIDEKCNVPPELRNVGMIFQDYALFPHLTVGENVAFGLTGWDKSHITERVKEMLSLVKLDGLENRYPHQLSGGQQQRVAIARALASKPDLLLLDEPFSNIDTQVRHSLIQEIRKIFKQQGVTAIFVTHSREEAFAFADKLA----VMNQGV 214

[Close]

BLAST of abc transporter vs. nr
Match: gi|1055826789|ref|WP_067419742.1| (ABC transporter ATP-binding protein [Enterovibrio coralii] >gi|991957637|gb|KXF80101.1| ABC transporter [Enterovibrio coralii])

HSP 1 Score: 266.929 bits (681), Expect = 4.123e-86
Identity = 132/158 (83.54%), Postives = 141/158 (89.24%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSV 158
            MTINGR IVD ++NVPPEQRNIGMIFQDYALFPHLTVAENVSFGL    K  V+ RV++ML LVKL+GLE+RYPHQLSGGQQQRVAIARALA +PDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V
Sbjct:   61 MTINGRTIVDGKMNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLKGKDKAAVSQRVKDMLALVKLDGLEARYPHQLSGGQQQRVAIARALAGEPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNQGV 214

[Close]

BLAST of abc transporter vs. nr
Match: gi|1011888650|ref|WP_062705381.1| (ABC transporter ATP-binding protein [Grimontia marina] >gi|1003051750|emb|CZF78183.1| Fe(3+) ions import ATP-binding protein FbpC 2 [Grimontia marina])

HSP 1 Score: 265.388 bits (677), Expect = 1.936e-85
Identity = 132/158 (83.54%), Postives = 137/158 (86.71%), Query Frame = 0

Query:    1 MTINGRPIVDDQLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLTCWTKTDVTARVQEMLMLVKLEGLESRYPHQLSGGQQQRVAIARALACKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLAAKFKVLNSSV 158
            M IN R IV   LNVPPEQRNIGMIFQDYALFPHLTVAENVSFGL  W K    ARV+EML LVKL+GL++RYPHQLSGGQQQRVAIARALA KPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA    V+N  V
Sbjct:   61 MMINCRQIVGPSLNVPPEQRNIGMIFQDYALFPHLTVAENVSFGLKGWDKVAAKARVKEMLALVKLDGLDARYPHQLSGGQQQRVAIARALAGKPDLLLLDEPFSNIDTQVRHSLIKEIRKIFKEQGVTAIFVTHSREEAFAFADKLA----VMNKGV 214

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 10


Match Name	E-value	Identity	Description
EMLSAG00000000074	6.810e-11	32.58	supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 ...	[more]
EMLSAG00000001342	2.207e-10	30.28	supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 ...	[more]
EMLSAG00000000736	1.425e-9	30.30	supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 ...	[more]
EMLSAG00000010048	8.920e-9	33.08	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]
EMLSAG00000007660	1.904e-7	31.33	supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g...	[more]
EMLSAG00000003104	3.908e-7	27.91	supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-...	[more]
EMLSAG00000002221	3.908e-7	39.47	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000011700	4.245e-7	40.32	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000012458	5.345e-7	35.71	supercontig:LSalAtl2s:LSalAtl2s917:121539:129683:-...	[more]
EMLSAG00000002016	7.449e-7	37.84	supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1...	[more]

BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|60389823\|sp\|Q6D2F6.1\|FBPC2_PECAS	6.433e-41	47.30	RecName: Full=Fe(3+) ions import ATP-binding prote...	[more]
gi\|123386797\|sp\|Q1QE80.1\|POTA_PSYCK	6.436e-41	43.98	RecName: Full=Spermidine/putrescine import ATP-bin...	[more]
gi\|81544970\|sp\|Q9KS33.1\|POTA_VIBCH	7.304e-41	47.30	RecName: Full=Spermidine/putrescine import ATP-bin...	[more]
gi\|56748747\|sp\|Q7NWX3.1\|CYSA2_CHRVO	9.018e-41	53.03	RecName: Full=Sulfate/thiosulfate import ATP-bindi...	[more]
gi\|34222612\|sp\|Q8Z0H0.1\|CYSA_NOSS1	1.079e-40	47.27	RecName: Full=Sulfate/thiosulfate import ATP-bindi...	[more]

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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|515572691\|ref\|WP_017005484.1\|	2.393e-100	79.69	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|515527483\|ref\|WP_016960715.1\|	3.286e-98	78.13	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|515572271\|ref\|WP_017005067.1\|	8.680e-98	77.60	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|654555662\|ref\|WP_028023056.1\|	1.743e-89	87.84	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|1154843026\|ref\|WP_078750846.1\|	4.892e-88	84.18	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|515575307\|ref\|WP_017008081.1\|	5.637e-88	70.83	MULTISPECIES: ABC transporter ATP-binding protein ...	[more]
gi\|488493983\|ref\|WP_002537427.1\|	5.037e-87	85.44	MULTISPECIES: ABC transporter ATP-binding protein ...	[more]
gi\|1330119670\|ref\|WP_102318500.1\|	5.996e-87	81.65	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|1055826789\|ref\|WP_067419742.1\|	4.123e-86	83.54	ABC transporter ATP-binding protein [Enterovibrio ...	[more]
gi\|1011888650\|ref\|WP_062705381.1\|	1.936e-85	83.54	ABC transporter ATP-binding protein [Grimontia mar...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold312_size212576	supercontig	scaffold312_size212576:49679..52560 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold312_size212576-snap-gene-0.16-mRNA-1	maker-scaffold312_size212576-snap-gene-0.16-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold312_size212576:49679..52560-

gene from alignment at scaffold312_size212576:49679..52560-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold312_size212576-snap-gene-0.16 ID=maker-scaffold312_size212576-snap-gene-0.16|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=2882bp|location=Sequence derived from alignment at scaffold312_size212576:49679..52560- (Tigriopus kingsejongensis)
ATGACCATTAATGGCCGCCCAATTGTGGACGACCAACTTAATGTCCCGCC
TGAGCAGCGTAACATCGGTATGATTTTTCAAGATTATGCATTGTTCCCTC
ATCTAACTGTGGCTGAAAATGTTTCTTTCGGCTTAACCTGCTGGACGAAA
ACTGACGTGACGGCACGTGTACAGGAAATGCTGATGTTGGTGAAACTGGA
AGGGCTAGAAAGTCGCTACCCTCACCAATTATCTGGCGGTCAGCAGCAGC
GAGTTGCGATCGCGCGCGCATTGGCGTGTAAGCCAGATCTGTTATTGCTG
GATGAACCCTTTTCAAATATCGATACGCAAGTTCGTCATAGCCTGATCAA
AGAAATTCGGAAGATTTTCAAAGAGCAGGGCGTCACAGCGATTTTTGTGA
CGCACAGTCGAGAAGAAGCCTTTGCCTTCGCCGATAAATTGGCGGTAATG
AATCACGGGGTGATTGAACAATACGGCAATGCCACCACACTGTATTACCA
GCCAAGCAGTCGTTTTGTCGCTGACTTTCTCGGACACGGCTCGTATGTAC
CTGTATCAATCAATAATGACAACACCATGAGCACTCCATTTGGTGAGTGG
CCGATTGAACACGTTGAAAATGAGACCATGCTTGAGTGGCTCATTCGCCC
ACAAAACCTCACGGTATCGTCAGATGCATCGGGAGAAGGGGTGGTGATAG
ACGCTCAGTTCATGGGAGACAGCAGCCGCTATCTAGTGAAAGTGAATGAG
CAGACATTGATGATTTATTCAAACCAGTTACTGGAAATAGGTGACAAGGT
GAGCCTGAATATTCGGCCGCATTTACCTGTTTTGTTTGCTTCGTGATGAG
CGTTTAGGGCAAACAACACACAGCGCAAGACAAAAGAAAACCGGCCATTG
ACCGGTTTTTTTGATTTCATTCCACGTTACTTGCCGCAAAGCAAATCTAT
ATAGCCTTCTGCCTGACGGGTTAATGCGTCTTTGTCAGGCTGCTGGTGGG
CTTGTAAATAGAGAATGTAACAAACGCCATCGAACATACGAGCCATTTCC
ATAGGCTCTCGATTAGCAGGCAATGTTTTTGATTCAATACCTTGTTCAAA
CAAACTGGCGTATTGCTCCAATACGACGTTTTTGCCATTGACAAAGTTTG
GCCAAATATCCTCTCGAATGGATGTACTCCATTCAAACCAGACCTTTAGC
CATTCTTTATCTTCGAGTGCTGCATTGATTAATGCTGATGCGACGTGAGA
TATGGATGCGTGAGCATCGCCGTTACCCAACTTAATATTTCGGGATATGA
GTTGTTGAAACTCTTTTTCCGCTTGATTGAGTACGACATCAACCAACTCT
TCACGGGTTGAAAAATAGTTAAATACGGTAGCCACGGAGACACCTGCCAT
ATCGGCGATGTCTGCATGTCCTGCGCGTCCAATGCCGCGCTTTGAAAACA
CCTCAAGCGCATATCCGAGCAGTTGTTCTTTTCTCTGCTCCGGCGACAAT
CGGGTTCGTGTACGTCCACTTGAAGTAGCCATTCTGATTCCTGCCAACTT
TTACGTGCTAATAATATTTGCGATTTGCAATCTGCAATCTGCAATCTGCA
ATTTTTATGTCTATTTAATATGATAATTAACAACTGCTTGTAAAGTGTAC
AGCAGCAACAAGTTGCACAGCAATGAACAGTCCATATAAAGCGTCGAAAT
TTTGACGTGTATCGAGAGTAGGCGCCGAGTTTGCACAGTGATAGAATACT
CGACCTCATTTACACAGGTAGTTAGACGGAAAACCGTCGAGGTTTATAAT
GAAACATACTGTAGAAGTGATGATTTCAGAGCAGGAAGTCCAGCAGCGCG
TTAAAGTGCTAGGCGCTGAAATTACAGAACACTATAAAGGCTCTGAAGAT
TTAGTAATGGTGGGCTTGTTGCGTGGCTCATTTGTTTTTATGGCGGATCT
CGCTCGTGCCATAGAGTTGCCACACACCGTTGATTTTATGACAGCCTCTA
GCTATGGCAACGCGATGGAAAGTACTCGCGATGTGCGAATCCTAAAAGAT
TTGGATGATGACATTAAAGGCAAAGACGTGCTTTTGGTCGAAGATATCAT
TGATACAGGGAACACACTGAGCAAAGTGTGTGAAATCTTGTCTATTCGTG
AGCCTAAATCCATTCGTATCTGTACCTTGCTAGATAAACCTGAACGTCGT
GAAGTGGATGTTCATGTTGATTGGTATGGCTTTAAAATTCCCGATGAATT
CGTTGTGGGAGTGGGTATCGATTACGCACAGAAATATCGTCACCTACCCT
ACATTGGTAAAGTCGTTCCATTGGAAGATTGATGCCATGAAAAAAGCGAC
CGAATGGGTCGCTTTTTTGTCTTTATGTGTTTCGTTATGTTGGTGACTTG
GTGGGAACCAGCTCAGCCATGGCGTCTTCATATACGGCTTCTAGCGTTTG
AAGGCTATTTGCATTCATCCCCAAATCTTTCAACACACCATCGCTGATGT
CATAGAACCAGCCGTGGATTTTGACGTCCTGCCCTCTCTCCCACGCGGAA
CGCAGAATAGTCGAGTTGCCAAGGTTATACACTTGTTCAGCAACATTGAT
TTCGCACAGCCTATTGCCTTGTTCCTCAAGGCTAAGCGAGCTCAAGTAGC
TTTTATGTTTGCGGTAAATATCACGAATATGAAGTAACCAGTTGTTGATC
AGGCCAAGTTCAAGGTTCTCAATAGCAGCGTGAACACCACCGCAGCGATA
GTGACCACAAATGATGATGTGTTTGACCTGAAGCACATCCACGGCGTATT
GGACGACGGAGAGGCAATTCAAATCAGTATGAATCACTTGGTTCGCCACA
TTACGGTGAACAAACAGTTCTCCCGAATCTAG

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk12413

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