abc transporter, maker-scaffold312_size212576-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6") HSP 1 Score: 116.316 bits (290), Expect = 3.130e-31 Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFG-YDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGI---TIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 R KG Y LLGP+G+GK+T + + + SG + +FG Y DL K++G +PQ+ + + L + + +A+ K RAK + LL+L +K+ + LSGG +RR +A AL+HEP LLILDEPT GVD LRR++W L +I I TI++TTHY++EA +G++ G ++ LLK Sbjct: 52 RITKGHIYGLLGPSGSGKTTLLQCVIGKQSLDSGSILVFGEYPGTKDLGVPGKRVGYMPQDLAMYMELTIMETLEFYGRIFNMPKAKIKKRAKFLVELLELPKKKILIQK-LSGGHQRRASLAVALLHEPDLLILDEPTVGVDPVLRRNIWGHLVDICNNPIRKTTIVVTTHYVDEARQ-ANMVGMMRFGRILAQNCPSRLLK 252
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5") HSP 1 Score: 115.931 bits (289), Expect = 2.586e-29 Identity = 77/231 (33.33%), Postives = 130/231 (56.28%), Query Frame = 0 Query: 44 AGIALYVGINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAK-KQLGLVPQEFNFNQYEKVEQILVNQAGYYG----VERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEI---NEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVET 266 + +L+ G+N+ KG Y LLGP+G GK+T + +I+ SG+ KIFG D T +E +++G +PQ+ +E ++ +YG ++ ++ + RA+ + +L+L + +SGG +RR+ +A AL+HEP+LL+LDEPT GVD LR+ +W L I + K TII+TTHY+EEA +G++ G+++++ + LL+K T Sbjct: 37 SNTSLFTGLNM-------SVPKGVIYGLLGPSGCGKTTLLRVITGREKLNSGEFKIFGEDPGTVGLEVPGRRIGYMPQDLAL----YMELTILETLFFYGRLNKMQTSKIRSRAETLIEILEL-PHSGRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHLLTIVNNSSKKRTIIITTHYVEEARQ-AHIVGMLRYGKILDEDAPTKLLEKFKALT 254
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1") HSP 1 Score: 114.39 bits (285), Expect = 8.774e-29 Identity = 80/233 (34.33%), Postives = 120/233 (51.50%), Query Frame = 0 Query: 35 TEPIPMAVLAGIALYVGINILDWSFLQRAH----KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDI-DTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKE--INEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 EP + L Y G N ++ L + +G Y LLG +G GK+T + I G+V +FG D + ++G +PQE + V + L Y +E + R L L + RD + LSGG KRR+ A AL+H+P+L ILDEPT GVD LR+S+W L + +N K TI++TTHY+EEA +IG++ G+L+ ++S + LL+ Sbjct: 21 NEPRIVVALRDACKYYGKNAMENRVLNNLNLTITEGSIYGLLGASGCGKTTVLSCIVGRKKLNKGQVTVFGGSPGDKGIGIPGNRIGYMPQEIALYKEFTVRETLKYFGRLYEMETDQIDQRIDFILKFLQITRDRDMVGK-LSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKK-TILITTHYIEEARQ-ATSIGLMRNGKLLAESSPEKLLQ 250
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 73.1738 bits (178), Expect = 9.626e-15 Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 0 Query: 63 AHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKK-YLTLLDLWEKRD----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYL 231 A G AL+GP+G GKST I +I + + G V I G DI T D + +G+V QE +Y E I + G + + +A Y + L +K D E LSGG K+R+ IARAL+ P +L+LDE ++ +D + + + L + KG T I+ H L Sbjct: 270 ASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKA-RKGRTTIIVAHRL 443
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001147 (supercontig:LSalAtl2s:LSalAtl2s118:91392:124552:1 gene:EMLSAG00000001147 transcript:EMLSAT00000001147 description:"maker-LSalAtl2s118-snap-gene-1.27") HSP 1 Score: 63.1586 bits (152), Expect = 1.958e-11 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 182 IARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELV 250 + R L+ +++ILDEPTAGVD RRS+W L + G TIILTTH+++EA++L I II+ G+L+ Sbjct: 502 VRRYLVGGSRVIILDEPTAGVDPFSRRSIWDILIRY-KTGRTIILTTHFMDEADLLGDRIAIISEGKLI 569
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 58.151 bits (139), Expect = 9.479e-10 Identity = 54/208 (25.96%), Postives = 103/208 (49.52%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEA-KKQLGLVPQE---FNFNQYEKVE--QILVNQAGYYGVER---AEAKVRA--KKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKL 262 G A++G +G+GKST + ++ G +KI Y+I+ +++ ++Q+ +VPQ+ FN + ++ + + Y V + + +R+ + YLT + E LSGG K+R+ IARA + + ++I DE T+ +D + LK + G T I+ H L + I +++ G+++E + + LL L Sbjct: 390 GKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVG------ERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS-GKTAIIIAHRLSTV-VHADEIFVLSNGKVIERGTHEELLNTL 589
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000741 (supercontig:LSalAtl2s:LSalAtl2s111:116041:261433:1 gene:EMLSAG00000000741 transcript:EMLSAT00000000741 description:"maker-LSalAtl2s111-snap-gene-2.14") HSP 1 Score: 58.151 bits (139), Expect = 1.038e-9 Identity = 60/227 (26.43%), Postives = 100/227 (44.05%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDL---------WEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTH---YLEEAEMLCRNIGIINRGELVED--TSMKALLKKLDVETFVL 269 + HK + A++GP G+GKST + + +SG + I+G ++ QE + IL+ A + K+YL +L + W RD E LSGG K R+ +AR++ E + +LD+P + VD + R ++ + T+IL TH YL +A NI ++N +ED T K L+ + D +F++ Sbjct: 446 QVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDISIYG------------KISYASQEPWIFSGTIRQNILLG-----------ASMNHKRYLKVLKVCSLEHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEADVYLLDDPLSAVDSHVGRHLYEECIKNYLSRKTVILVTHQIQYLGDAS----NIILLNTKGEIEDQGTLNKLLMSERDFTSFLV 645 HSP 2 Score: 57.7658 bits (138), Expect = 1.245e-9 Identity = 63/229 (27.51%), Postives = 104/229 (45.41%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDL---------WEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMW--TFLKEINEKGITIILTTH---YLEEAEMLCRNIGIIN-RGEL-VEDTSMKALLKKLDVETFVL 269 + HK + A++GP G+GKST + + +SG + I+G ++ QE + IL+ A + K+YL +L + W RD E LSGG K R+ +AR++ E + +LD+P + VD + R ++ K ++ K T+IL TH YL EA NI ++N +GE + T K L+ + D + F++ Sbjct: 1225 QVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDISIYG------------KISYASQEPWIFSGTIRQNILLG-----------APMNHKRYLKVLKVCSLDHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEGDVYLLDDPLSAVDSHVGRYLYEECIKKYLSRK--TVILVTHQIQYLREAN----NIILLNTKGETEAQGTLNKLLMSERDFKPFLV 1424
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 55.4546 bits (132), Expect = 6.732e-9 Identity = 58/212 (27.36%), Postives = 93/212 (43.87%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSR-----TLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGI----TIILTTH---YLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 R G A++G G+GKS+ I I + K SGKV+I K Q+ VPQE IL + Y E + L L DE LSGG ++R+ +ARA+ + + I D P + +D ++ +S++ + N GI T +L TH YL +I ++ +GE++ + + + LL+K Sbjct: 577 RIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRI------------KGQIAYVPQESWMQNTSLKNNILFGKP--YDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLN-NNTGIIKDKTRLLVTHGISYLPHVH----HIAVMLKGEIIHEGTYQELLEK 769 HSP 2 Score: 53.1434 bits (126), Expect = 3.676e-8 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQE-FNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLD--LWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIE 205 G+ ++G GAGKS+ + +V +G++ I G DI T L + ++ L ++PQE F+ + N + + V K+Y+ L L E LS G ++ + +ARAL+ K+LILDE TA VD E Sbjct: 1186 GERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLDPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWE 1329
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 55.0694 bits (131), Expect = 7.293e-9 Identity = 59/206 (28.64%), Postives = 94/206 (45.63%), Query Frame = 0 Query: 70 ALLGPNGAGKSTTIGIISSLVN-KTSGKVKIFGY---DIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAK----------KYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 AL+G +G GK+T ++ + G ++I G D+D + +G + QE +E I + E EA A Y T+L E T+SGG K+R+ IARAL+ P +LILDE T+ +D E R + L +++ KG T ++ H L + I +I++G + E + AL +K Sbjct: 465 ALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSA-IGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILG------ERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLS-KGRTSLVIAHRLSTIKN-ADVIAVIDKGVMAEIGTHAALKRK 661
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 54.6842 bits (130), Expect = 1.235e-8 Identity = 59/227 (25.99%), Postives = 105/227 (46.26%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINE--KGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK-LDVETFVLDLAPDSKVTNLED 282 ++G+ A++GP G+GKS+ +IS+L+ + K T+ VE + PQ + IL + + + ++A + ++ + D E LSGG K+R+ +ARA+ + + LD+P A VD + + ++ + N +G T IL TH L L I + GE+ E + K L++K D + + A ++K+TN D Sbjct: 1172 NRGNLIAIIGPVGSGKSS---LISALLGEMLFTSK------GTNPVEIHGSVAYTPQNAWMQNVSVKDNILFGRK--FNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLH-LVDEIYFLKDGEITEKGTYKELMEKNCDFSELISNHA-NNKITNQSD 1385 HSP 2 Score: 53.1434 bits (126), Expect = 4.403e-8 Identity = 54/201 (26.87%), Postives = 96/201 (47.76%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRD------EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL 259 GD ++G G+GKST + L+ SG++ I G DI L + +L ++PQ+ L +G+ + + + K+ L D ++ E +S G ++ + +ARAL+ + K+LI+DE TA VD E + + +K+ N + T++ H L+ + I +I+ G ++E S K LL Sbjct: 1778 GDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTL-----FSGTLRLNLDPFGLFKDMELIESLKHAYLQDFLKEDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKD-NFRDSTVLTIAHRLQTV-LDYSKIIVIDSGCIIEYDSPKNLL 1971
BLAST of abc transporter vs. SwissProt
Match: gi|549484|sp|P36879.1|YADG_ECOLI (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YadG) HSP 1 Score: 361.688 bits (927), Expect = 4.766e-125 Identity = 172/216 (79.63%), Postives = 193/216 (89.35%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 GDFYALLGPNGAGKSTTIGIISSLVNKTSG+V +FGYD++ D+V AK+QLGLVPQEFNFN +E V+QI+VNQAGYYGVER EA +R++KYL LDLW KR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMW FLK++N+KG TIILTTHYLEEAEMLCRNIGII GELVE+TSMKALL KL ETF+LDLAP S + L+ Sbjct: 31 GDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSPLPKLD 246
BLAST of abc transporter vs. SwissProt
Match: gi|239938767|sp|P94440.2|YFIL_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiL) HSP 1 Score: 176.792 bits (447), Expect = 1.343e-52 Identity = 89/204 (43.63%), Postives = 129/204 (63.24%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFV 268 KG+ + LLGPNGAGKSTTI +IS LV SG + + GY I + +AK+++G+VPQE + L+ YG+ EAK RA + L + L E+ + T SGGMKRR+ I ALMH+P+LLI+DEPT G+D + R + +K++NE G+T+I T+HY+EE E LC IGII++GE++ + L +L +T + Sbjct: 26 KGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHGEAKKRAAEVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTII 229
BLAST of abc transporter vs. SwissProt
Match: gi|124015175|sp|Q39GT7.2|NODI_BURL3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 145.206 bits (365), Expect = 1.688e-40 Identity = 74/195 (37.95%), Postives = 117/195 (60.00%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 G+ Y LLGPNGAGK+TT+ ++ L + +G + + G + + A++++G+VPQ N + V + L+ Y+G+ A K L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI++TTH++EEAE LC + +I G + + + AL++ Sbjct: 31 GECYGLLGPNGAGKTTTLKMLLGLTHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAQAAHALVKPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|122978951|sp|Q1BWI2.1|NODI_BURCA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 144.436 bits (363), Expect = 3.093e-40 Identity = 73/195 (37.44%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 G+ Y LLGPNGAGK+TT+ ++ L + +G + + G + + A++++G+VPQ N + V + L+ + Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI++TTH++EEAE LC + +I G + + + AL++ Sbjct: 31 GECYGLLGPNGAGKTTTLKMLLGLAHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSRYFGMSAQAARALVAPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015174|sp|Q63TX3.2|NODI_BURPS (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 144.05 bits (362), Expect = 5.315e-40 Identity = 72/195 (36.92%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 G+ + LLGPNGAGK+TT+ ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++ Sbjct: 31 GECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015172|sp|Q62K72.2|NODI_BURMA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I >gi|124015173|sp|Q3JSQ0.2|NODI_BURP1 RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.665 bits (361), Expect = 6.232e-40 Identity = 72/195 (36.92%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 G+ + LLGPNGAGK+TT+ ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++ Sbjct: 31 GECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015176|sp|Q2SVP3.2|NODI_BURTA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.28 bits (360), Expect = 9.732e-40 Identity = 72/197 (36.55%), Postives = 117/197 (59.39%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 G+ + LLGPNGAGK+T + ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ EA+ L L K D LSGGMKRRL +ARAL++ P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++ Sbjct: 29 QPGECFGLLGPNGAGKTTALKMLLGITHPDAGSISLCGEPVPSRARHARRRVGVVPQFDNLDPDFTVRENLLVFARYFGLAAHEARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRTLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|123259958|sp|Q1LKJ2.1|NODI_RALME (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.28 bits (360), Expect = 1.046e-39 Identity = 75/184 (40.76%), Postives = 110/184 (59.78%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRG 247 G + LLGPNGAGK+TT+ ++ L SG + + G I +A+ ++G+VPQ N + V + L Y+G+ A+ R K L L + D R LSGGM+RRL +ARAL+++P LLI+DEPT G+D + R +W LK + G TI+LTTH++EEAE LC ++ +I+ G Sbjct: 28 QPGQCFGLLGPNGAGKTTTLRMLLGLTTPASGTLMLCGEPIPQRAPQARMRVGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAQIAERVPKLLEFARLESRADAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTHFMEEAERLCNHLCVIDAG 211
BLAST of abc transporter vs. SwissProt
Match: gi|81849565|sp|Q8XXY9.1|NODI_RALSO (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 140.584 bits (353), Expect = 1.870e-38 Identity = 70/183 (38.25%), Postives = 111/183 (60.66%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRG 247 +G + LLGPNGAGK+TT+ ++ + +G +++ G I A+ ++G+VPQ N + V + L Y+G+ A + R L L +K D P R LSGGM+RRL +AR+L+++P +L++DEPT G+D + R +W L+ + G TI+LTTH++EEAE LC + +I+ G Sbjct: 41 RGQCFGLLGPNGAGKTTTLRMLLGMTMPDAGTLQLCGETIPGHAHRARMRVGVVPQFDNLDPDFTVSENLQIFGRYFGLPAATIRKRMPGLLEFARLEQKADAPVRALSGGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSLLASGKTILLTTHFMEEAERLCDELCVIDNG 223
BLAST of abc transporter vs. SwissProt
Match: gi|6093521|sp|P72335.1|NODI_RHIS3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 138.658 bits (348), Expect = 5.883e-38 Identity = 79/219 (36.07%), Postives = 122/219 (55.71%), Query Frame = 0 Query: 43 LAGIALYVGINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 LAG+ G ++ G+ + LLGPNGAGKST ++ + +GK+ + G + A+K +G+VPQ N +Q V + L+ Y+G+ + K L L K D LSGGMKRRL +ARAL+++P+LL++DEPT G+D R +W L+ + +G TIILTTH++EEAE LC + ++ G + + S AL+++ Sbjct: 8 LAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEE 226
BLAST of abc transporter vs. nr
Match: gi|1149062866|ref|WP_077645810.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1146149692|gb|OOF00424.1| ABC transporter [Salinivibrio sp. IB643] >gi|1146156606|gb|OOF07005.1| ABC transporter [Salinivibrio sp. MA607] >gi|1146157294|gb|OOF07673.1| ABC transporter [Salinivibrio sp. MA440]) HSP 1 Score: 380.563 bits (976), Expect = 4.565e-130 Identity = 178/217 (82.03%), Postives = 197/217 (90.78%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKV+QI+VNQAGYYGV RA+AK RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL +IN +GITIILTTHYLEEAE LCRNIGIINRG+LVEDTSMKALL KLD ETF+LDL P ++ LE Sbjct: 29 EGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVQQIVVNQAGYYGVPRAQAKARAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSQINRQGITIILTTHYLEEAETLCRNIGIINRGQLVEDTSMKALLSKLDAETFILDLQPGHQLNALE 245
BLAST of abc transporter vs. nr
Match: gi|1149089024|ref|WP_077667350.1| (ABC transporter ATP-binding protein [Salinivibrio siamensis] >gi|1146136869|gb|OOE87876.1| ABC transporter [Salinivibrio siamensis]) HSP 1 Score: 380.178 bits (975), Expect = 5.559e-130 Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+D+ VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDSQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|1148720671|ref|WP_077456525.1| (ABC transporter ATP-binding protein [Salinivibrio kushneri] >gi|1146094242|gb|OOE46353.1| ABC transporter [Salinivibrio kushneri] >gi|1146096174|gb|OOE48194.1| ABC transporter [Salinivibrio kushneri]) HSP 1 Score: 380.178 bits (975), Expect = 6.067e-130 Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMK+LL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKSLLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|1148752003|ref|WP_077484289.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1146108772|gb|OOE60351.1| ABC transporter [Salinivibrio sp. ML323] >gi|1146117893|gb|OOE69245.1| ABC transporter [Salinivibrio sp. IB282] >gi|1146131783|gb|OOE82872.1| ABC transporter [Salinivibrio sp. PR6]) HSP 1 Score: 379.793 bits (974), Expect = 7.634e-130 Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+D+ VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDSQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|803554126|ref|WP_046074005.1| (ABC transporter ATP-binding protein [Salinivibrio sp. KP-1] >gi|802241784|gb|KKA45349.1| ABC transporter [Salinivibrio sp. KP-1]) HSP 1 Score: 379.793 bits (974), Expect = 7.976e-130 Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+D+ VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDSQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold312_size212576:46901..48406- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold312_size212576-snap-gene-0.17 ID=maker-scaffold312_size212576-snap-gene-0.17|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1506bp|location=Sequence derived from alignment at scaffold312_size212576:46901..48406- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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