abc transporter, maker-scaffold312_size212576-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6") HSP 1 Score: 116.316 bits (290), Expect = 3.130e-31 Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFG-YDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGI---TIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 R KG Y LLGP+G+GK+T + + + SG + +FG Y DL K++G +PQ+ + + L + + +A+ K RAK + LL+L +K+ + LSGG +RR +A AL+HEP LLILDEPT GVD LRR++W L +I I TI++TTHY++EA +G++ G ++ LLK Sbjct: 52 RITKGHIYGLLGPSGSGKTTLLQCVIGKQSLDSGSILVFGEYPGTKDLGVPGKRVGYMPQDLAMYMELTIMETLEFYGRIFNMPKAKIKKRAKFLVELLELPKKKILIQK-LSGGHQRRASLAVALLHEPDLLILDEPTVGVDPVLRRNIWGHLVDICNNPIRKTTIVVTTHYVDEARQ-ANMVGMMRFGRILAQNCPSRLLK 252
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5") HSP 1 Score: 115.931 bits (289), Expect = 2.586e-29 Identity = 77/231 (33.33%), Postives = 130/231 (56.28%), Query Frame = 0 Query: 44 AGIALYVGINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAK-KQLGLVPQEFNFNQYEKVEQILVNQAGYYG----VERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEI---NEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVET 266 + +L+ G+N+ KG Y LLGP+G GK+T + +I+ SG+ KIFG D T +E +++G +PQ+ +E ++ +YG ++ ++ + RA+ + +L+L + +SGG +RR+ +A AL+HEP+LL+LDEPT GVD LR+ +W L I + K TII+TTHY+EEA +G++ G+++++ + LL+K T Sbjct: 37 SNTSLFTGLNM-------SVPKGVIYGLLGPSGCGKTTLLRVITGREKLNSGEFKIFGEDPGTVGLEVPGRRIGYMPQDLAL----YMELTILETLFFYGRLNKMQTSKIRSRAETLIEILEL-PHSGRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHLLTIVNNSSKKRTIIITTHYVEEARQ-AHIVGMLRYGKILDEDAPTKLLEKFKALT 254
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1") HSP 1 Score: 114.39 bits (285), Expect = 8.774e-29 Identity = 80/233 (34.33%), Postives = 120/233 (51.50%), Query Frame = 0 Query: 35 TEPIPMAVLAGIALYVGINILDWSFLQRAH----KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDI-DTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKE--INEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260 EP + L Y G N ++ L + +G Y LLG +G GK+T + I G+V +FG D + ++G +PQE + V + L Y +E + R L L + RD + LSGG KRR+ A AL+H+P+L ILDEPT GVD LR+S+W L + +N K TI++TTHY+EEA +IG++ G+L+ ++S + LL+ Sbjct: 21 NEPRIVVALRDACKYYGKNAMENRVLNNLNLTITEGSIYGLLGASGCGKTTVLSCIVGRKKLNKGQVTVFGGSPGDKGIGIPGNRIGYMPQEIALYKEFTVRETLKYFGRLYEMETDQIDQRIDFILKFLQITRDRDMVGK-LSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKK-TILITTHYIEEARQ-ATSIGLMRNGKLLAESSPEKLLQ 250
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 73.1738 bits (178), Expect = 9.626e-15 Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 0 Query: 63 AHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKK-YLTLLDLWEKRD----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYL 231 A G AL+GP+G GKST I +I + + G V I G DI T D + +G+V QE +Y E I + G + + +A Y + L +K D E LSGG K+R+ IARAL+ P +L+LDE ++ +D + + + L + KG T I+ H L Sbjct: 270 ASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKA-RKGRTTIIVAHRL 443
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001147 (supercontig:LSalAtl2s:LSalAtl2s118:91392:124552:1 gene:EMLSAG00000001147 transcript:EMLSAT00000001147 description:"maker-LSalAtl2s118-snap-gene-1.27") HSP 1 Score: 63.1586 bits (152), Expect = 1.958e-11 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 182 IARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELV 250 + R L+ +++ILDEPTAGVD RRS+W L + G TIILTTH+++EA++L I II+ G+L+ Sbjct: 502 VRRYLVGGSRVIILDEPTAGVDPFSRRSIWDILIRY-KTGRTIILTTHFMDEADLLGDRIAIISEGKLI 569
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 58.151 bits (139), Expect = 9.479e-10 Identity = 54/208 (25.96%), Postives = 103/208 (49.52%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEA-KKQLGLVPQE---FNFNQYEKVE--QILVNQAGYYGVER---AEAKVRA--KKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKL 262 G A++G +G+GKST + ++ G +KI Y+I+ +++ ++Q+ +VPQ+ FN + ++ + + Y V + + +R+ + YLT + E LSGG K+R+ IARA + + ++I DE T+ +D + LK + G T I+ H L + I +++ G+++E + + LL L Sbjct: 390 GKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVG------ERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS-GKTAIIIAHRLSTV-VHADEIFVLSNGKVIERGTHEELLNTL 589
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000741 (supercontig:LSalAtl2s:LSalAtl2s111:116041:261433:1 gene:EMLSAG00000000741 transcript:EMLSAT00000000741 description:"maker-LSalAtl2s111-snap-gene-2.14") HSP 1 Score: 58.151 bits (139), Expect = 1.038e-9 Identity = 60/227 (26.43%), Postives = 100/227 (44.05%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDL---------WEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTH---YLEEAEMLCRNIGIINRGELVED--TSMKALLKKLDVETFVL 269 + HK + A++GP G+GKST + + +SG + I+G ++ QE + IL+ A + K+YL +L + W RD E LSGG K R+ +AR++ E + +LD+P + VD + R ++ + T+IL TH YL +A NI ++N +ED T K L+ + D +F++ Sbjct: 446 QVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDISIYG------------KISYASQEPWIFSGTIRQNILLG-----------ASMNHKRYLKVLKVCSLEHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEADVYLLDDPLSAVDSHVGRHLYEECIKNYLSRKTVILVTHQIQYLGDAS----NIILLNTKGEIEDQGTLNKLLMSERDFTSFLV 645 HSP 2 Score: 57.7658 bits (138), Expect = 1.245e-9 Identity = 63/229 (27.51%), Postives = 104/229 (45.41%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDL---------WEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMW--TFLKEINEKGITIILTTH---YLEEAEMLCRNIGIIN-RGEL-VEDTSMKALLKKLDVETFVL 269 + HK + A++GP G+GKST + + +SG + I+G ++ QE + IL+ A + K+YL +L + W RD E LSGG K R+ +AR++ E + +LD+P + VD + R ++ K ++ K T+IL TH YL EA NI ++N +GE + T K L+ + D + F++ Sbjct: 1225 QVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDISIYG------------KISYASQEPWIFSGTIRQNILLG-----------APMNHKRYLKVLKVCSLDHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEGDVYLLDDPLSAVDSHVGRYLYEECIKKYLSRK--TVILVTHQIQYLREAN----NIILLNTKGETEAQGTLNKLLMSERDFKPFLV 1424
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 55.4546 bits (132), Expect = 6.732e-9 Identity = 58/212 (27.36%), Postives = 93/212 (43.87%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSR-----TLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGI----TIILTTH---YLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 R G A++G G+GKS+ I I + K SGKV+I K Q+ VPQE IL + Y E + L L DE LSGG ++R+ +ARA+ + + I D P + +D ++ +S++ + N GI T +L TH YL +I ++ +GE++ + + + LL+K Sbjct: 577 RIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRI------------KGQIAYVPQESWMQNTSLKNNILFGKP--YDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLN-NNTGIIKDKTRLLVTHGISYLPHVH----HIAVMLKGEIIHEGTYQELLEK 769 HSP 2 Score: 53.1434 bits (126), Expect = 3.676e-8 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQE-FNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLD--LWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIE 205 G+ ++G GAGKS+ + +V +G++ I G DI T L + ++ L ++PQE F+ + N + + V K+Y+ L L E LS G ++ + +ARAL+ K+LILDE TA VD E Sbjct: 1186 GERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLDPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWE 1329
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 55.0694 bits (131), Expect = 7.293e-9 Identity = 59/206 (28.64%), Postives = 94/206 (45.63%), Query Frame = 0 Query: 70 ALLGPNGAGKSTTIGIISSLVN-KTSGKVKIFGY---DIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAK----------KYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 AL+G +G GK+T ++ + G ++I G D+D + +G + QE +E I + E EA A Y T+L E T+SGG K+R+ IARAL+ P +LILDE T+ +D E R + L +++ KG T ++ H L + I +I++G + E + AL +K Sbjct: 465 ALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSA-IGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILG------ERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLS-KGRTSLVIAHRLSTIKN-ADVIAVIDKGVMAEIGTHAALKRK 661
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 54.6842 bits (130), Expect = 1.235e-8 Identity = 59/227 (25.99%), Postives = 105/227 (46.26%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRD-----EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINE--KGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK-LDVETFVLDLAPDSKVTNLED 282 ++G+ A++GP G+GKS+ +IS+L+ + K T+ VE + PQ + IL + + + ++A + ++ + D E LSGG K+R+ +ARA+ + + LD+P A VD + + ++ + N +G T IL TH L L I + GE+ E + K L++K D + + A ++K+TN D Sbjct: 1172 NRGNLIAIIGPVGSGKSS---LISALLGEMLFTSK------GTNPVEIHGSVAYTPQNAWMQNVSVKDNILFGRK--FNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLH-LVDEIYFLKDGEITEKGTYKELMEKNCDFSELISNHA-NNKITNQSD 1385 HSP 2 Score: 53.1434 bits (126), Expect = 4.403e-8 Identity = 54/201 (26.87%), Postives = 96/201 (47.76%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT-DLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRD------EPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL 259 GD ++G G+GKST + L+ SG++ I G DI L + +L ++PQ+ L +G+ + + + K+ L D ++ E +S G ++ + +ARAL+ + K+LI+DE TA VD E + + +K+ N + T++ H L+ + I +I+ G ++E S K LL Sbjct: 1778 GDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTL-----FSGTLRLNLDPFGLFKDMELIESLKHAYLQDFLKEDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKD-NFRDSTVLTIAHRLQTV-LDYSKIIVIDSGCIIEYDSPKNLL 1971
BLAST of abc transporter vs. SwissProt
Match: gi|124015177|sp|Q8KLG1.3|NODI_RHIEC (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 135.961 bits (341), Expect = 8.589e-37 Identity = 73/201 (36.32%), Postives = 113/201 (56.22%), Query Frame = 0 Query: 62 RAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKL 262 R G+ + LLGPNGAGKST +I + +GK+ + G + A+K +G+VPQ N V + L+ + Y+G+ + + L L K + LSGGMKRRL +ARAL+++P+LL++DEPT G+D R +W L+ + +G TIILTTH++EEAE LC + ++ G + + L+ +L Sbjct: 39 RVSPGECFGLLGPNGAGKSTIARMILGMTAPDAGKITVLGVPVPAQARLARKGIGVVPQFDNLEPEFTVRENLLVYSRYFGMNTRKVEAVMSSLLEFARLESKVNARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRGKTIILTTHFMEEAERLCDRLCVLEGGRSIAEGRPHDLIDEL 239
BLAST of abc transporter vs. SwissProt
Match: gi|14286141|sp|P23703.2|NODI_RHILO (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 134.42 bits (337), Expect = 5.928e-36 Identity = 73/219 (33.33%), Postives = 120/219 (54.79%), Query Frame = 0 Query: 43 LAGIALYVGINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 AG+ G I+ G+ + LLGPNGAGKST ++ + +G + + G + A++ +G+VPQ N +Q V + L+ Y+G+ +++ L L K D LSGGMKR L +ARAL+++P+L+++DEPT G+D R +W L+ + +G TIILTTH++EEAE LC + ++ +G + + +AL+ + Sbjct: 44 FAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGTITVLGVPVPARARLARRGIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRQSEAVIPSLLEFARLERKADARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDE 262
BLAST of abc transporter vs. SwissProt
Match: gi|123062938|sp|Q13ZJ1.1|NODI_BURXL (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 132.88 bits (333), Expect = 8.814e-36 Identity = 72/194 (37.11%), Postives = 115/194 (59.28%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL 259 G+ + LLGPNGAGK+TT+ ++ + +G +++ G I A+ ++G+VPQ N + V + L+ Y+G+ A+ + L L K D LSGGMKRRL +ARAL+++P +LI+DEPT G+D + R +W L+ + +G TI+LTTH++EEAE LC + +I G + + + AL+ Sbjct: 31 GECFGLLGPNGAGKTTTLRMLLGIAAPDAGTIRLCGEPIPRRARVARARVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAAQCRAMVPPLLEFARLESKADARVSELSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPSALI 224
BLAST of abc transporter vs. SwissProt
Match: gi|71164822|sp|P0A9U1.1|YBHF_ECOLI (RecName: Full=Probable multidrug ABC transporter ATP-binding protein YbhF >gi|71164823|sp|P0A9U2.1|YBHF_SHIFL RecName: Full=Probable multidrug ABC transporter ATP-binding protein YbhF) HSP 1 Score: 136.346 bits (342), Expect = 3.124e-35 Identity = 71/186 (38.17%), Postives = 109/186 (58.60%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELV 250 +G+ + LLGPNGAGKSTT ++ L+ TSG+ + G D+ +A++ LG + Q+F+ VEQ L +G YG+ + + L + L G K+RL +A +LMHEP +L LDEPT+GVD RR W + + EKG+T+++TTH+++EAE C IG++ RG+L+ Sbjct: 354 RGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAE-YCDRIGLVYRGKLI 538 HSP 2 Score: 114.39 bits (285), Expect = 1.842e-27 Identity = 70/209 (33.49%), Postives = 115/209 (55.02%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSR---TLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVL 269 H G L+GP+GAGK+T + +++ L+ SG + G+D + LG +PQ+F YE + ++ N Y + + R + + LL+ R LSGGMK++L +A L+ EPK+L+LDEP GVD RR +W + E+ +G+ I+ +T YL+EAE CR++ ++N GEL+ KAL + + +F++ Sbjct: 31 HAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGL--YEDL-TVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQ-CRDVLLMNEGELLYQGEPKALTQTMAGRSFLM 235
BLAST of abc transporter vs. SwissProt
Match: gi|124015178|sp|Q1M7W6.2|NODI_RHIL3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 131.339 bits (329), Expect = 3.881e-35 Identity = 82/226 (36.28%), Postives = 127/226 (56.19%), Query Frame = 0 Query: 39 PMAV-LAGIALYVGINIL--DWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 P+A+ LAG++ G I+ D SF A G+ + LLGPNGAGKST +I + + + GK+ + G + A+ ++G+V Q N + V + L+ Y+ + E + L L K + LSGGMKRRL +ARAL+++P+LLILDEPT G+D R +W L+ + +G TI+LTTH +EEAE LC + ++ G + + AL+++ Sbjct: 10 PVAIDLAGVSKSYGGKIVVNDLSFTIAA--GECFGLLGPNGAGKSTITRMILGMTSPSVGKITVLGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIETVIPSLLEFARLESKANTRVADLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEE 233
BLAST of abc transporter vs. SwissProt
Match: gi|85700402|sp|Q99758.2|ABCA3_HUMAN (RecName: Full=ATP-binding cassette sub-family A member 3; AltName: Full=ABC-C transporter; AltName: Full=ATP-binding cassette transporter 3; Short=ATP-binding cassette 3) HSP 1 Score: 135.961 bits (341), Expect = 1.067e-34 Identity = 76/186 (40.86%), Postives = 114/186 (61.29%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGEL 249 ++G LLG NGAGK+TT+ +++ L TSG+ I GY+I D+V+ +K LGL PQ V + L A G+ R + K+ L ++ L +K + SR LSGGM+R+L I AL+ K+LILDEPT+G+D RR++W L+ + TI+LTTH+++EA++L I I+ +GEL Sbjct: 557 YEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR-QKSDRTIVLTTHFMDEADLLGDRIAIMAKGEL 741 HSP 2 Score: 107.842 bits (268), Expect = 4.804e-25 Identity = 62/186 (33.33%), Postives = 100/186 (53.76%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGEL 249 KG+ + LLG NGAGK+TT +++ + TSG + G+ I +D+ + ++++G PQ + ++LV A G+ + L L L ++ RT SGG KR+L AL+ EP ++ LDEP+ G+D RR +W + E G II+T+H +EE E LC + I+ +G+ Sbjct: 1407 QKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSHSMEECEALCTRLAIMVQGQF 1592
BLAST of abc transporter vs. SwissProt
Match: gi|29840794|sp|P26050.2|NODI_BRADU (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 129.798 bits (325), Expect = 1.339e-34 Identity = 77/225 (34.22%), Postives = 123/225 (54.67%), Query Frame = 0 Query: 40 MAV-LAGIALYVGINIL--DWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261 MA+ L G+ G ++ D SF +G+ + LLGPNGAGKST ++ +++ GK+ + + + A+ ++G+VPQ N V + L+ Y+G+ + L L K D LSGGMKRRL +ARAL+++P LL++DEPT G+D R +W L+ + +G TI+LTTH++EEAE LC + ++ G + + AL+ + Sbjct: 6 MAIDLVGVRKSFGDKVIVNDLSF--SVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLDEPVPSRARAARVRVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDE 228
BLAST of abc transporter vs. SwissProt
Match: gi|123760166|sp|Q46YX6.1|NODI_CUPPJ (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 130.183 bits (326), Expect = 1.558e-34 Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 0 Query: 52 INILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRG 247 +N LD + H+G + LLGPNGAGK+TT+ ++ L G + + G I +A+ ++G+VPQ N + V + L Y+G+ A + R L L + + R LSGGM+RRL +ARAL+++P LLI+DEPT G+D + R +W LK + G TI+LTTH++EEAE LC + +I+ G Sbjct: 42 VNDLDL----QVHRGQCFGLLGPNGAGKTTTLRLLLGLTTPAGGSLTLCGEPIPERAPQARMRVGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAVIERRVPALLEFARLENRANAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTILLTTHFMEEAERLCNYLCVIDGG 233
BLAST of abc transporter vs. SwissProt
Match: gi|338817896|sp|Q8R420.3|ABCA3_MOUSE (RecName: Full=ATP-binding cassette sub-family A member 3) HSP 1 Score: 134.806 bits (338), Expect = 2.967e-34 Identity = 75/186 (40.32%), Postives = 113/186 (60.75%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGEL 249 ++G LLG NGAGK+TT+ +++ L TSG I GY+I D+ + +K LGL PQ V + L A G+ + K+ L +L L +KRD S+ LSGGMKR+L I AL+ K+L+LDEPT+G+D RR++W L++ + T++LTTH+++EA++L I I+ +GEL Sbjct: 557 YEGQITVLLGHNGAGKTTTMSLLTGLFPPTSGHAYIHGYEISQDMAQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHILSLEDKRDLRSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQ-QKSDRTVLLTTHFMDEADLLGDRIAILAKGEL 741 HSP 2 Score: 107.071 bits (266), Expect = 9.070e-25 Identity = 61/186 (32.80%), Postives = 99/186 (53.23%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGEL 249 KG+ + LLG NGAGK+TT +++ TSG + GY I +D+ + ++++G PQ + ++LV A G+ + L L L ++ +T SGG KR+L AL+ EP ++ LDEP+ G+D RR +W + E G I++T+H +EE E LC + I+ +G+ Sbjct: 1407 QKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFVGGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLINACVENTLRGLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECEALCTRLAIMVQGQF 1592
BLAST of abc transporter vs. SwissProt
Match: gi|124106285|sp|O52618.3|NODI_RHIME (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 129.413 bits (324), Expect = 3.546e-34 Identity = 70/187 (37.43%), Postives = 107/187 (57.22%), Query Frame = 0 Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVED 252 G+ + LLGPNGAGKST +I + +G++ + G + + A+ ++G+VPQ N + V + L+ Y+ + E + L L K D LSGGMKRRL +ARAL+++P+LLILDEPT G+D R +W L+ + +G TI+LTTH +EEAE LC + ++ G + + Sbjct: 62 GECFGLLGPNGAGKSTITRMILGMTTPGTGEITVLGVPVPSRARLARMRIGVVPQFDNLDLEFTVRENLLVFGRYFRMSTREIEAVIPSLLEFARLENKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAERLCDRLCVLEAGHKIAE 248
BLAST of abc transporter vs. nr
Match: gi|1248116042|ref|WP_096618639.1| (ABC transporter ATP-binding protein [bacterium symbiont of Cryptopsaras couesii] >gi|1247077828|gb|ATF08677.1| ABC-type multidrug transport system, ATPase component [bacterium symbiont of Cryptopsaras couesii]) HSP 1 Score: 394.045 bits (1011), Expect = 1.662e-135 Identity = 185/218 (84.86%), Postives = 205/218 (94.04%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282 +GDFYALLGPNGAGKST IGIISSLVNKTSG VKIFGYDID DLVEAKKQLGLVPQEFNFNQYEKV+QIL+NQAGYYGV+R A+VRAKKYL+LLDLWEKR+EPS+TLSGGMKRRLM+ARALMHEPKLLILDEPTAGVDIELRRSMWTFLK++NE GITIILTTHYLEEAE LCRNIGIINRGEL+EDTS+ LLKK+++ETF+LD+AP S+V L + Sbjct: 29 QGDFYALLGPNGAGKSTLIGIISSLVNKTSGNVKIFGYDIDIDLVEAKKQLGLVPQEFNFNQYEKVQQILLNQAGYYGVDRDTARVRAKKYLSLLDLWEKRNEPSKTLSGGMKRRLMLARALMHEPKLLILDEPTAGVDIELRRSMWTFLKDMNESGITIILTTHYLEEAETLCRNIGIINRGELIEDTSITLLLKKINIETFLLDVAPHSQVVTLNN 246
BLAST of abc transporter vs. nr
Match: gi|1255102654|ref|WP_097357308.1| (ABC transporter ATP-binding protein [bacterium symbiont of Melanocetus johnsonii] >gi|1249823163|gb|PCS21556.1| ABC-type multidrug transport system, ATPase component [bacterium symbiont of Melanocetus johnsonii]) HSP 1 Score: 386.341 bits (991), Expect = 2.611e-132 Identity = 179/217 (82.49%), Postives = 204/217 (94.01%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 KGDFYALLGPNGAGKSTTIGII SLV KTSGKV+IFG+DIDTDL++AK+QLGLVPQEFNFNQ+EKVE ILVNQAGYYG+ER EAK RAKKYL+ LDLWEKRD+ + LSGGMKR+LMIARALMH+PKLL+LDEPTAG+DIELRRSMW FLKEIN++G+TIILTTHYLEEAE+LCRNIGIINRG L+EDT+MK LLKKLDVETF+LDLAP+SKV +++ Sbjct: 29 KGDFYALLGPNGAGKSTTIGIICSLVRKTSGKVRIFGHDIDTDLIQAKRQLGLVPQEFNFNQFEKVEHILVNQAGYYGIEREEAKRRAKKYLSQLDLWEKRDKQAFNLSGGMKRQLMIARALMHDPKLLVLDEPTAGIDIELRRSMWVFLKEINQRGVTIILTTHYLEEAEILCRNIGIINRGILIEDTTMKDLLKKLDVETFILDLAPESKVVHIK 245
BLAST of abc transporter vs. nr
Match: gi|1149328522|ref|WP_077764986.1| (ABC transporter ATP-binding protein [Salinivibrio sp. PR5] >gi|1146162586|gb|OOF12581.1| ABC transporter [Salinivibrio sp. PR5]) HSP 1 Score: 385.571 bits (989), Expect = 4.367e-132 Identity = 182/217 (83.87%), Postives = 199/217 (91.71%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKV+QI+VNQAGYYGV RA+AK RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ LE Sbjct: 29 EGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVQQIVVNQAGYYGVPRAQAKERAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSEINRQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLE 245
BLAST of abc transporter vs. nr
Match: gi|1068517906|ref|WP_069586432.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1063003625|gb|ODQ01817.1| ABC transporter [Salinivibrio sp. DV] >gi|1146166680|gb|OOF16486.1| ABC transporter [Salinivibrio sp. PR919] >gi|1146168845|gb|OOF18583.1| ABC transporter [Salinivibrio sp. PR932] >gi|1146174762|gb|OOF24328.1| ABC transporter [Salinivibrio sp. IB574] >gi|1146176600|gb|OOF26119.1| ABC transporter [Salinivibrio proteolyticus] >gi|1146182165|gb|OOF31477.1| ABC transporter [Salinivibrio costicola subsp. vallismortis] >gi|1246519676|gb|PCE68888.1| ABC transporter ATP-binding protein [Salinivibrio sp. YCSC6]) HSP 1 Score: 385.571 bits (989), Expect = 4.415e-132 Identity = 182/217 (83.87%), Postives = 199/217 (91.71%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKV+QI+VNQAGYYGV RA+AK RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ LE Sbjct: 29 EGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVQQIVVNQAGYYGVPRAQAKERAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSEINRQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLE 245
BLAST of abc transporter vs. nr
Match: gi|1148719476|ref|WP_077455330.1| (ABC transporter ATP-binding protein [Salinivibrio sp. IB872] >gi|1146179411|gb|OOF28848.1| ABC transporter [Salinivibrio sp. IB872]) HSP 1 Score: 384.03 bits (985), Expect = 2.065e-131 Identity = 181/217 (83.41%), Postives = 199/217 (91.71%), Query Frame = 0 Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKV+QI+VNQAGYYGV RA+AK RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 29 EGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVQQIVVNQAGYYGVPRAQAKERAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSEINRQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|1148857521|ref|WP_077578737.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1146115530|gb|OOE66902.1| ABC transporter [Salinivibrio sp. IB868] >gi|1146124549|gb|OOE75774.1| ABC transporter [Salinivibrio sp. IB870]) HSP 1 Score: 382.874 bits (982), Expect = 6.372e-131 Identity = 181/218 (83.03%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ LE Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLE 245
BLAST of abc transporter vs. nr
Match: gi|647295131|ref|WP_025739397.1| (ABC transporter ATP-binding protein [Salinivibrio socompensis]) HSP 1 Score: 382.104 bits (980), Expect = 9.979e-131 Identity = 180/217 (82.95%), Postives = 197/217 (90.78%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNL 280 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV RA+AK RAKKYL+ LDLW+KR+EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL +IN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K+ L Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRAQAKERAKKYLSQLDLWDKRNEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSQINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLSKLDAETFILDLQPGHKLNAL 244
BLAST of abc transporter vs. nr
Match: gi|1148894075|ref|WP_077606104.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1146125203|gb|OOE76416.1| ABC transporter [Salinivibrio sp. ML290] >gi|1146130178|gb|OOE81284.1| ABC transporter [Salinivibrio sp. ML198]) HSP 1 Score: 381.333 bits (978), Expect = 1.903e-130 Identity = 180/218 (82.57%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLSEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|1063262839|ref|WP_069363390.1| (MULTISPECIES: ABC transporter ATP-binding protein [Salinivibrio] >gi|1062997292|gb|ODP95671.1| ABC transporter [Salinivibrio sp. BNH] >gi|1146083735|gb|OOE36266.1| ABC transporter [Salinivibrio kushneri] >gi|1146084136|gb|OOE36660.1| ABC transporter [Salinivibrio kushneri] >gi|1146088012|gb|OOE40373.1| ABC transporter [Salinivibrio kushneri] >gi|1146101540|gb|OOE53360.1| ABC transporter [Salinivibrio kushneri] >gi|1146102959|gb|OOE54757.1| ABC transporter [Salinivibrio kushneri] >gi|1146103871|gb|OOE55642.1| ABC transporter [Salinivibrio kushneri] >gi|1146111067|gb|OOE62563.1| ABC transporter [Salinivibrio kushneri] >gi|1146119335|gb|OOE70675.1| ABC transporter [Salinivibrio kushneri]) HSP 1 Score: 380.948 bits (977), Expect = 2.642e-130 Identity = 180/218 (82.57%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+DT VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ L+ Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDTQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLQPGHKLSTLD 245
BLAST of abc transporter vs. nr
Match: gi|1149336411|ref|WP_077771190.1| (ABC transporter ATP-binding protein [Salinivibrio sharmensis] >gi|1146139216|gb|OOE90187.1| ABC transporter [Salinivibrio sharmensis]) HSP 1 Score: 380.948 bits (977), Expect = 3.288e-130 Identity = 180/218 (82.57%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281 +GDFYALLGPNGAGKSTTIGI+SSLVNKT G+V IFGYD+D+ VEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGV R +AK+RAKKYL+ LDLW+KR EP+R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL EIN +GITIILTTHYLEEAE LCRNIGIINRGELVEDTSMKALL KLD ETF+LDL P K++ LE Sbjct: 28 EEGDFYALLGPNGAGKSTTIGILSSLVNKTQGQVSIFGYDLDSQKVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVPRDQAKLRAKKYLSQLDLWDKRHEPARNLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWDFLTEINRQGITIILTTHYLEEAETLCRNIGIINRGELVEDTSMKALLAKLDAETFILDLKPGHKLSTLE 245 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold312_size212576:46901..48406- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold312_size212576-snap-gene-0.17 ID=maker-scaffold312_size212576-snap-gene-0.17|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1506bp|location=Sequence derived from alignment at scaffold312_size212576:46901..48406- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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