abc transporter, maker-scaffold312_size212576-snap-gene-0.17 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001122 (supercontig:LSalAtl2s:LSalAtl2s118:125434:135666:1 gene:EMLSAG00000001122 transcript:EMLSAT00000001122 description:"maker-LSalAtl2s118-snap-gene-1.28") HSP 1 Score: 53.5286 bits (127), Expect = 2.478e-8 Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0
Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQE 121
+G+ + LLG NGAGK+TT +++ +N TSG I GY I ++ ++ LG PQE
Sbjct: 453 RGECFGLLGINGAGKTTTFKMLTGDINPTSGDAFINGYSIFNEMGRCRQSLGYCPQE 509
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003724 (supercontig:LSalAtl2s:LSalAtl2s1:3545780:3558615:1 gene:EMLSAG00000003724 transcript:EMLSAT00000003724 description:"maker-LSalAtl2s1-augustus-gene-35.19") HSP 1 Score: 53.1434 bits (126), Expect = 2.944e-8 Identity = 47/188 (25.00%), Postives = 86/188 (45.74%), Query Frame = 0
Query: 70 ALLGPNGAGKSTTIGIISSLVNKTSGKVKI-----FGYDIDTDLVEAKKQLG---LVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGEL 249
++G NG+GKST + +I ++ T G+ + FGY + + L ++ ++F + E+ Q+L G++G+ A + + +LSGG K R+ A EP LILDEPT +D+E ++ L + N +IL H M+C+ + + ++G++
Sbjct: 476 CIVGKNGSGKSTLLKLIMEEISVTDGRRIVHRNLKFGYFSQHHVDQLNMNLCPLQIMEKKFRGKKMEECRQML----GHFGISGDLAL-----------------QKTSSLSGGQKSRVAFAVLCGEEPNFLILDEPTNHLDLETIDALGHGLMKYNG---GLILVCHDERLIRMVCQELWVCSKGKI 639
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000940 (supercontig:LSalAtl2s:LSalAtl2s1166:1016:21423:-1 gene:EMLSAG00000000940 transcript:EMLSAT00000000940 description:"maker-LSalAtl2s1166-snap-gene-0.62") HSP 1 Score: 48.9062 bits (115), Expect = 8.911e-7 Identity = 53/210 (25.24%), Postives = 100/210 (47.62%), Query Frame = 0
Query: 51 GINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYD----------IDTDLVEAKKQLGLVP--------QEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDL-WEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNI 241
G ++ + LQ H G Y L+GPNG GK+T + I + + + + + ++T L +K+ L+ QE + E++ ++ ++ G ++AE K A++ L L E ++ + SGG + R+ +ARAL EP LL+LDEPT +D+ + +L+ + T+++ +H + +C +I
Sbjct: 201 GKDLFRDAKLQITH-GRRYGLVGPNGHGKTTLLRHIGTRSLQIPPNIDVLICEQEVVANEMSALETVLQSDEKRTALLKECKDLEKKQENGVDVTERLNEV-YDELRAIGADQAEPK--ARRLLAGLGFDKEMQERSTNKFSGGWRMRVSLARALYIEPTLLMLDEPTNHLDLNAVIWLDNYLQNWKK---TLLVVSHDQSFLDNICTDI 403
BLAST of abc transporter vs. SwissProt
Match: gi|549484|sp|P36879.1|YADG_ECOLI (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YadG) HSP 1 Score: 361.688 bits (927), Expect = 4.766e-125 Identity = 172/216 (79.63%), Postives = 193/216 (89.35%), Query Frame = 0
Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
GDFYALLGPNGAGKSTTIGIISSLVNKTSG+V +FGYD++ D+V AK+QLGLVPQEFNFN +E V+QI+VNQAGYYGVER EA +R++KYL LDLW KR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMW FLK++N+KG TIILTTHYLEEAEMLCRNIGII GELVE+TSMKALL KL ETF+LDLAP S + L+
Sbjct: 31 GDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSPLPKLD 246
BLAST of abc transporter vs. SwissProt
Match: gi|239938767|sp|P94440.2|YFIL_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiL) HSP 1 Score: 176.792 bits (447), Expect = 1.343e-52 Identity = 89/204 (43.63%), Postives = 129/204 (63.24%), Query Frame = 0
Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFV 268
KG+ + LLGPNGAGKSTTI +IS LV SG + + GY I + +AK+++G+VPQE + L+ YG+ EAK RA + L + L E+ + T SGGMKRR+ I ALMH+P+LLI+DEPT G+D + R + +K++NE G+T+I T+HY+EE E LC IGII++GE++ + L +L +T +
Sbjct: 26 KGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHGEAKKRAAEVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTII 229
BLAST of abc transporter vs. SwissProt
Match: gi|124015175|sp|Q39GT7.2|NODI_BURL3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 145.206 bits (365), Expect = 1.688e-40 Identity = 74/195 (37.95%), Postives = 117/195 (60.00%), Query Frame = 0
Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260
G+ Y LLGPNGAGK+TT+ ++ L + +G + + G + + A++++G+VPQ N + V + L+ Y+G+ A K L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI++TTH++EEAE LC + +I G + + + AL++
Sbjct: 31 GECYGLLGPNGAGKTTTLKMLLGLTHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAQAAHALVKPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|122978951|sp|Q1BWI2.1|NODI_BURCA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 144.436 bits (363), Expect = 3.093e-40 Identity = 73/195 (37.44%), Postives = 118/195 (60.51%), Query Frame = 0
Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260
G+ Y LLGPNGAGK+TT+ ++ L + +G + + G + + A++++G+VPQ N + V + L+ + Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI++TTH++EEAE LC + +I G + + + AL++
Sbjct: 31 GECYGLLGPNGAGKTTTLKMLLGLAHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSRYFGMSAQAARALVAPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015174|sp|Q63TX3.2|NODI_BURPS (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 144.05 bits (362), Expect = 5.315e-40 Identity = 72/195 (36.92%), Postives = 118/195 (60.51%), Query Frame = 0
Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260
G+ + LLGPNGAGK+TT+ ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++
Sbjct: 31 GECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015172|sp|Q62K72.2|NODI_BURMA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I >gi|124015173|sp|Q3JSQ0.2|NODI_BURP1 RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.665 bits (361), Expect = 6.232e-40 Identity = 72/195 (36.92%), Postives = 118/195 (60.51%), Query Frame = 0
Query: 66 GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260
G+ + LLGPNGAGK+TT+ ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ A+ L L K D LSGGMKRRL +ARAL+++P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++
Sbjct: 31 GECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|124015176|sp|Q2SVP3.2|NODI_BURTA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.28 bits (360), Expect = 9.732e-40 Identity = 72/197 (36.55%), Postives = 117/197 (59.39%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLK 260
G+ + LLGPNGAGK+T + ++ + + +G + + G + + A++++G+VPQ N + V + L+ A Y+G+ EA+ L L K D LSGGMKRRL +ARAL++ P +L+LDEPT G+D + R MW L+ + +G TI+LTTH++EEAE LC + +I G + + + + L++
Sbjct: 29 QPGECFGLLGPNGAGKTTALKMLLGITHPDAGSISLCGEPVPSRARHARRRVGVVPQFDNLDPDFTVRENLLVFARYFGLAAHEARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRTLIE 225
BLAST of abc transporter vs. SwissProt
Match: gi|123259958|sp|Q1LKJ2.1|NODI_RALME (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 143.28 bits (360), Expect = 1.046e-39 Identity = 75/184 (40.76%), Postives = 110/184 (59.78%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRG 247
G + LLGPNGAGK+TT+ ++ L SG + + G I +A+ ++G+VPQ N + V + L Y+G+ A+ R K L L + D R LSGGM+RRL +ARAL+++P LLI+DEPT G+D + R +W LK + G TI+LTTH++EEAE LC ++ +I+ G
Sbjct: 28 QPGQCFGLLGPNGAGKTTTLRMLLGLTTPASGTLMLCGEPIPQRAPQARMRVGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAQIAERVPKLLEFARLESRADAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTHFMEEAERLCNHLCVIDAG 211
BLAST of abc transporter vs. SwissProt
Match: gi|81849565|sp|Q8XXY9.1|NODI_RALSO (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 140.584 bits (353), Expect = 1.870e-38 Identity = 70/183 (38.25%), Postives = 111/183 (60.66%), Query Frame = 0
Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRG 247
+G + LLGPNGAGK+TT+ ++ + +G +++ G I A+ ++G+VPQ N + V + L Y+G+ A + R L L +K D P R LSGGM+RRL +AR+L+++P +L++DEPT G+D + R +W L+ + G TI+LTTH++EEAE LC + +I+ G
Sbjct: 41 RGQCFGLLGPNGAGKTTTLRMLLGMTMPDAGTLQLCGETIPGHAHRARMRVGVVPQFDNLDPDFTVSENLQIFGRYFGLPAATIRKRMPGLLEFARLEQKADAPVRALSGGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSLLASGKTILLTTHFMEEAERLCDELCVIDNG 223
BLAST of abc transporter vs. SwissProt
Match: gi|6093521|sp|P72335.1|NODI_RHIS3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I) HSP 1 Score: 138.658 bits (348), Expect = 5.883e-38 Identity = 79/219 (36.07%), Postives = 122/219 (55.71%), Query Frame = 0
Query: 43 LAGIALYVGINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKK 261
LAG+ G ++ G+ + LLGPNGAGKST ++ + +GK+ + G + A+K +G+VPQ N +Q V + L+ Y+G+ + K L L K D LSGGMKRRL +ARAL+++P+LL++DEPT G+D R +W L+ + +G TIILTTH++EEAE LC + ++ G + + S AL+++
Sbjct: 8 LAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEE 226
BLAST of abc transporter vs. nr
Match: gi|515575573|ref|WP_017008346.1| (MULTISPECIES: ABC transporter ATP-binding protein [Enterovibrio] >gi|1067382559|gb|OEE58198.1| ABC transporter [Enterovibrio calviensis FF-85] >gi|1098365199|emb|SFQ31249.1| ABC-2 type transport system ATP-binding protein [Enterovibrio norvegicus DSM 15893]) HSP 1 Score: 437.573 bits (1124), Expect = 1.592e-152 Identity = 211/219 (96.35%), Postives = 217/219 (99.09%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282
+GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQIL+NQAGYYGVERAEAKVRAKKYL+LLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEIN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVT+LE+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILLNQAGYYGVERAEAKVRAKKYLSLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINAQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTHLEN 246
BLAST of abc transporter vs. nr
Match: gi|515581847|ref|WP_017014573.1| (MULTISPECIES: ABC transporter ATP-binding protein [Enterovibrio] >gi|1067488586|gb|OEF57387.1| ABC transporter [Enterovibrio calviensis 1F-211] >gi|1067492510|gb|OEF61120.1| ABC transporter [Enterovibrio calviensis 1F-230] >gi|1326569504|gb|PMH63920.1| ABC transporter [Enterovibrio norvegicus] >gi|1326645894|gb|PMI34528.1| ABC transporter [Enterovibrio norvegicus] >gi|1326648849|gb|PMI37275.1| ABC transporter [Enterovibrio norvegicus] >gi|1327181079|gb|PMN46005.1| ABC transporter [Enterovibrio norvegicus] >gi|1327229301|gb|PMN92977.1| ABC transporter [Enterovibrio norvegicus]) HSP 1 Score: 437.187 bits (1123), Expect = 1.806e-152 Identity = 211/219 (96.35%), Postives = 217/219 (99.09%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282
+GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQIL+NQAGYYGVERAEAKVRAKKYL+LLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEIN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVT+LE+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILLNQAGYYGVERAEAKVRAKKYLSLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINAQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTHLEN 246
BLAST of abc transporter vs. nr
Match: gi|1330119664|ref|WP_102318496.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1327007141|gb|PML77564.1| ABC transporter [Enterovibrio norvegicus] >gi|1327204231|gb|PMN68554.1| ABC transporter [Enterovibrio norvegicus]) HSP 1 Score: 435.647 bits (1119), Expect = 7.061e-152 Identity = 210/219 (95.89%), Postives = 217/219 (99.09%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282
+GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQIL+NQAGYYGVERAEAKVRAKKYL+LLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLK+IN +GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVT+LE+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILLNQAGYYGVERAEAKVRAKKYLSLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKDINAQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTHLEN 246
BLAST of abc transporter vs. nr
Match: gi|654555657|ref|WP_028023051.1| (ABC transporter ATP-binding protein [Enterovibrio calviensis]) HSP 1 Score: 434.876 bits (1117), Expect = 1.714e-151 Identity = 209/219 (95.43%), Postives = 216/219 (98.63%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282
+GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQIL+NQAGYYGVERAEAKVRAKKYL+LLDLWEKRDEPSRTLSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMWTFLK INE+GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDS+VT LE+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILLNQAGYYGVERAEAKVRAKKYLSLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRRSMWTFLKGINEQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSQVTQLEN 246
BLAST of abc transporter vs. nr
Match: gi|515527478|ref|WP_016960710.1| (ABC transporter ATP-binding protein [Enterovibrio norvegicus] >gi|1067382214|gb|OEE57879.1| ABC transporter [Enterovibrio norvegicus FF-454] >gi|1067395486|gb|OEE70517.1| ABC transporter [Enterovibrio norvegicus FF-33] >gi|1067406190|gb|OEE80099.1| ABC transporter [Enterovibrio norvegicus FF-162]) HSP 1 Score: 432.565 bits (1111), Expect = 1.467e-150 Identity = 208/219 (94.98%), Postives = 216/219 (98.63%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLED 282
+GDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDT LV+AK+QLGLVPQEFNFNQYEKVEQIL+NQAGYYGV+RAEAKVR+KKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINE+GITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVT LE+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTHLVDAKRQLGLVPQEFNFNQYEKVEQILLNQAGYYGVDRAEAKVRSKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEQGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTKLEN 246
BLAST of abc transporter vs. nr
Match: gi|488493992|ref|WP_002537436.1| (MULTISPECIES: ABC transporter ATP-binding protein [Grimontia] >gi|486373633|gb|EOD80491.1| ABC-type multidrug transport system, ATPase component [Grimontia indica] >gi|808151909|gb|KKD60361.1| ABC transporter [Grimontia sp. AD028]) HSP 1 Score: 412.149 bits (1058), Expect = 1.543e-142 Identity = 197/217 (90.78%), Postives = 209/217 (96.31%), Query Frame = 0
Query: 65 KGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
+GDFYALLGPNGAGKSTTIGI+SSLVNKTSGKVKIFGYDIDT LVEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGVER EAK RAKKYLT LDLWEKR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFL+EIN++GITIILTTHYLEEAEMLCRNIGIINRGEL+EDTSMKALLKKLDVETFVLDLAPDS V +LE
Sbjct: 29 EGDFYALLGPNGAGKSTTIGIVSSLVNKTSGKVKIFGYDIDTQLVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVEREEAKRRAKKYLTQLDLWEKRNESARNLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLQEINKQGITIILTTHYLEEAEMLCRNIGIINRGELIEDTSMKALLKKLDVETFVLDLAPDSSVKSLE 245
BLAST of abc transporter vs. nr
Match: gi|1011847384|ref|WP_062666072.1| (ABC transporter ATP-binding protein [Grimontia celer] >gi|1003043050|emb|CZF83605.1| Daunorubicin/doxorubicin resistance ATP-binding protein DrrA [Grimontia celer]) HSP 1 Score: 411.764 bits (1057), Expect = 1.879e-142 Identity = 196/218 (89.91%), Postives = 209/218 (95.87%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
+GDFYALLGPNGAGKSTTIGI+SSLVNKTSGKVKIFGYDIDT LVEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGVER EAK RAKKYLT LDLWEKR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFL+EIN++GITIILTTHYLEEAEMLCRNIGIINRGEL+EDTSMKALLKKLDVETF+LDLAPDS V +LE
Sbjct: 28 EEGDFYALLGPNGAGKSTTIGIVSSLVNKTSGKVKIFGYDIDTQLVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVEREEAKRRAKKYLTQLDLWEKRNESARNLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLQEINKQGITIILTTHYLEEAEMLCRNIGIINRGELIEDTSMKALLKKLDVETFILDLAPDSSVKSLE 245
BLAST of abc transporter vs. nr
Match: gi|1011888643|ref|WP_062705374.1| (ABC transporter ATP-binding protein [Grimontia marina] >gi|1003051745|emb|CZF78167.1| Daunorubicin/doxorubicin resistance ATP-binding protein DrrA [Grimontia marina]) HSP 1 Score: 409.453 bits (1051), Expect = 1.715e-141 Identity = 195/218 (89.45%), Postives = 209/218 (95.87%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
+GDFYALLGPNGAGKSTTIGI+SSLVNKTSGKVKIFG+DIDT LVEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGVER EAK RA+KYLT LDLWEKR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFL+EIN++GITIILTTHYLEEAEMLCRNIGIINRGEL+EDTSMKALLKKLDVETFVLDLAPDS V +LE
Sbjct: 28 EEGDFYALLGPNGAGKSTTIGIVSSLVNKTSGKVKIFGFDIDTQLVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVEREEAKRRARKYLTQLDLWEKRNESARNLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLQEINKQGITIILTTHYLEEAEMLCRNIGIINRGELIEDTSMKALLKKLDVETFVLDLAPDSSVKSLE 245
BLAST of abc transporter vs. nr
Match: gi|1154843031|ref|WP_078750851.1| (ABC transporter ATP-binding protein [Enterovibrio nigricans] >gi|1152209013|emb|SKA45163.1| ABC-2 type transport system ATP-binding protein [Enterovibrio nigricans DSM 22720]) HSP 1 Score: 406.371 bits (1043), Expect = 2.677e-140 Identity = 191/218 (87.61%), Postives = 208/218 (95.41%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
+GDFYALLGPNGAGKSTTIGII SLVNKT+G VKIFGYDIDT LVEAK+QLGLVPQEFNFNQYEKVEQI+VNQAGYYGVER EAK RAKKYLT+LDLWEKRD+P++ LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMW+FL+EIN++GITIILTTHYLEEAEMLCRNIGIINRGEL+E+TSMKALL+KLDVETFVLDLAP+S V L+
Sbjct: 28 QQGDFYALLGPNGAGKSTTIGIICSLVNKTAGSVKIFGYDIDTHLVEAKRQLGLVPQEFNFNQYEKVEQIVVNQAGYYGVERLEAKARAKKYLTMLDLWEKRDQPAKALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWSFLREINQQGITIILTTHYLEEAEMLCRNIGIINRGELIENTSMKALLQKLDVETFVLDLAPNSTVRALD 245
BLAST of abc transporter vs. nr
Match: gi|491644543|ref|WP_005502070.1| (ABC transporter ATP-binding protein [Grimontia hollisae] >gi|262222191|gb|EEY73503.1| ABC-type multidrug transport system ATPase component [Grimontia hollisae CIP 101886] >gi|991861912|gb|AMG30203.1| ABC transporter ATP-binding protein [Grimontia hollisae]) HSP 1 Score: 405.216 bits (1040), Expect = 8.355e-140 Identity = 191/218 (87.61%), Postives = 210/218 (96.33%), Query Frame = 0
Query: 64 HKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIFGYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKVRAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELVEDTSMKALLKKLDVETFVLDLAPDSKVTNLE 281
+GDFYALLGPNGAGKSTTIGI+SSLVNKT+GKVKIFGYDIDTDLVEAKKQ+GLVPQEFNFNQ+EKVEQI+VNQAGYYGVER EAK RA+KYL+ LDLW+KR+E +R LSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFL++IN++GITIILTTHYLEEAEMLCRNIGIINRGEL+EDTSMKALLKKLDVETF+LDL PDS+V +LE
Sbjct: 28 QEGDFYALLGPNGAGKSTTIGILSSLVNKTAGKVKIFGYDIDTDLVEAKKQIGLVPQEFNFNQFEKVEQIVVNQAGYYGVERDEAKRRARKYLSQLDLWDKRNESARNLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLQDINKQGITIILTTHYLEEAEMLCRNIGIINRGELIEDTSMKALLKKLDVETFILDLVPDSRVEHLE 245 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold312_size212576:46901..48406- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold312_size212576-snap-gene-0.17 ID=maker-scaffold312_size212576-snap-gene-0.17|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1506bp|location=Sequence derived from alignment at scaffold312_size212576:46901..48406- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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