60s ribosomal protein l44, maker-scaffold316_size209483-snap-gene-1.40 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l44
Unique Namemaker-scaffold316_size209483-snap-gene-1.40
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 60s ribosomal protein l44 vs. L. salmonis genes
Match: EMLSAG00000006936 (supercontig:LSalAtl2s:LSalAtl2s393:565159:565727:-1 gene:EMLSAG00000006936 transcript:EMLSAT00000006936 description:"maker-LSalAtl2s393-augustus-gene-5.40")

HSP 1 Score: 187.578 bits (475), Expect = 9.100e-64
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK RRTYCP   C +H+KFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC KCK+R QVPLKRTKHFELGGDKKRKGQMIQF
Sbjct:    1 MVNIPKLRRTYCP--SCNHHEKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECSKCKRRQQVPLKRTKHFELGGDKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|31340370|sp|Q9NB33.3|RL44_OCHTR (RecName: Full=60S ribosomal protein L44)

HSP 1 Score: 156.377 bits (394), Expect = 6.815e-50
Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK RRTYC   +C+ H+  KVTQYKKS+E K +QGRRRYDRKQ+GFGGQ+KPI RKKAKTTKKIVLR+EC  CK R Q PLKR KHFELGGDKKRKGQMIQF
Sbjct:    1 MVNVPKQRRTYCK--KCKVHRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|1350749|sp|P48166.2|RL36A_CAEEL (RecName: Full=Ribosomal protein rpl-36.A; AltName: Full=60S ribosomal protein L44; AltName: Full=L41)

HSP 1 Score: 154.451 bits (389), Expect = 2.990e-49
Identity = 77/106 (72.64%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRT+C   +CR H   KVTQYKK +ESKFAQGRRRYDRKQ GFGGQ+KPI RKKAKTTKKIVLR+EC +CK + Q+P+KR KHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKARRTFCDG-KCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|3122756|sp|P90702.3|RL44_BRUMA (RecName: Full=60S ribosomal protein L44)

HSP 1 Score: 150.214 bits (378), Expect = 1.692e-47
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRT+C   +CR H   KVTQYKK +ES+ AQGRRRYD KQ+GFGGQ+KPI RKKAKTTKKIVLR+EC +CK R Q+P+KR KHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKTRRTFCDG-KCRRHTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKKTRGQVIQF 105
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|47605970|sp|P61485.2|RL36A_DANRE (RecName: Full=60S ribosomal protein L36a >gi|47605971|sp|P61486.2|RL36A_TAKRU RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44 >gi|47605972|sp|P61487.2|RL36A_ICTPU RecName: Full=60S ribosomal protein L36a)

HSP 1 Score: 144.436 bits (363), Expect = 3.330e-45
Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC--QKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRTYC   +C+ HQ  KVTQYKK ++S +AQG+RRYDRKQ G+GGQ+KPI RKKAKTTKKIVLRLEC    C+ +  + +KR KHFELGGDKKRKGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|57013007|sp|Q969Q0.3|RL36L_HUMAN (RecName: Full=60S ribosomal protein L36a-like; AltName: Full=Large ribosomal subunit protein eL42-like)

HSP 1 Score: 142.895 bits (359), Expect = 1.355e-44
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC--QKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRT+C   +C  HQ  KVTQYKK ++S +AQGRRRYDRKQ G+GGQ+KPI RKKAKTTKKIVLRLEC    C+ +  + +KR KHFELGGDKKRKGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
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BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|47117720|sp|P83883.2|RL36A_RAT (RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44 >gi|47117721|sp|P83884.2|RL36A_PIG RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44 >gi|47117731|sp|P83881.2|RL36A_HUMAN RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44; AltName: Full=Cell growth-inhibiting gene 15 protein; AltName: Full=Cell migration-inducing gene 6 protein; AltName: Full=Large ribosomal subunit protein eL42 >gi|47117732|sp|P83882.2|RL36A_MOUSE RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44 >gi|108860934|sp|Q3SZ59.3|RL36A_BOVIN RecName: Full=60S ribosomal protein L36a >gi|325530233|sp|D0VWQ4.1|RL36A_CANFA RecName: Full=60S ribosomal protein L36a; AltName: Full=60S ribosomal protein L44)

HSP 1 Score: 141.354 bits (355), Expect = 4.779e-44
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC--QKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRT+C   +C  HQ  KVTQYKK ++S +AQG+RRYDRKQ G+GGQ+KPI RKKAKTTKKIVLRLEC    C+ +  + +KR KHFELGGDKKRKGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|62511104|sp|Q5R9D2.3|RL36L_PONAB (RecName: Full=60S ribosomal protein L36a-like)

HSP 1 Score: 140.969 bits (354), Expect = 6.788e-44
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC--QKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRT+C   +C  HQ  KVTQYKK ++S +AQGRRRYDRK+ G+GGQ+KPI RKKAKTTKKIVLRLEC    C+ +  + +KR KHFELGGDKKRKGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|132966|sp|P27074.2|RL44Q_CANMA (RecName: Full=60S ribosomal protein L44 Q; AltName: Full=L41; AltName: Full=L41 Q-type)

HSP 1 Score: 140.584 bits (353), Expect = 1.296e-43
Identity = 70/106 (66.04%), Postives = 82/106 (77.36%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC    CR H   KVTQYK  + S FAQG+RRYDRKQ G+GGQ+K +  KKAKTTKKIVL+LEC  CK + Q+PLKR KH ELGG+KK+KGQ +QF
Sbjct:    1 MVNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQALQF 106
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|132967|sp|P27075.2|RL44_CANTR (RecName: Full=60S ribosomal protein L44; AltName: Full=60S ribosomal protein L41)

HSP 1 Score: 140.198 bits (352), Expect = 1.310e-43
Identity = 70/106 (66.04%), Postives = 82/106 (77.36%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC    CR H   KVTQYK  + S FAQG+RRYDRKQ G+GGQ+K +  KKAKTTKKIVL+LEC  CK + Q+PLKR KH ELGG+KK+KGQ +QF
Sbjct:    1 MVNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQALQF 106
[Close]
BLAST of 60s ribosomal protein l44 vs. SwissProt
Match: gi|2500380|sp|Q96499.3|RL44_GOSHI (RecName: Full=60S ribosomal protein L44)

HSP 1 Score: 139.813 bits (351), Expect = 2.036e-43
Identity = 68/104 (65.38%), Postives = 82/104 (78.85%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMI 104
            MVN+PK+++TYC   ECR H   KVTQYKK ++S  AQG+RRYDRKQ G+GGQ+KP+  KKAKTTKKIVLRL+CQ CK   Q P+KR KHFE+GGDKK KG  +
Sbjct:    1 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 104
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BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|225708866|gb|ACO10279.1| (60S ribosomal protein L44 [Caligus rogercresseyi] >gi|225712950|gb|ACO12321.1| 60S ribosomal protein L44 [Lepeophtheirus salmonis] >gi|290462613|gb|ADD24354.1| 60S ribosomal protein L44 [Lepeophtheirus salmonis] >gi|290562671|gb|ADD38731.1| 60S ribosomal protein L44 [Lepeophtheirus salmonis])

HSP 1 Score: 187.578 bits (475), Expect = 8.523e-60
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK RRTYCP   C +H+KFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLEC KCK+R QVPLKRTKHFELGGDKKRKGQMIQF
Sbjct:    1 MVNIPKLRRTYCP--SCNHHEKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECSKCKRRQQVPLKRTKHFELGGDKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|961375814|gb|ALS04651.1| (60S ribosomal protein L44 [Pseudodiaptomus poplesia] >gi|961376124|gb|ALS04806.1| 60S ribosomal protein L44 [Pseudodiaptomus poplesia] >gi|961376412|gb|ALS04950.1| 60S ribosomal protein L44 [Pseudodiaptomus poplesia])

HSP 1 Score: 169.088 bits (427), Expect = 1.431e-52
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC   +C  HQKFKVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILRKKAKTTKK+VL++EC  CK + Q+P+KRTKHFELGG+KKRKGQMIQF
Sbjct:    1 MVNIPKARNTYCA--KCNKHQKFKVTQYKKSAESKQAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKLVLKIECSTCKWKHQIPIKRTKHFELGGEKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|509391740|gb|AGN29651.1| (60S ribosomal protein L44 [Acartia pacifica] >gi|961375000|gb|ALS04244.1| 60S ribosomal protein L44 [Acartia pacifica] >gi|961375002|gb|ALS04245.1| 60S ribosomal protein L44 [Acartia pacifica] >gi|961375004|gb|ALS04246.1| 60S ribosomal protein L44 [Acartia pacifica])

HSP 1 Score: 167.933 bits (424), Expect = 4.890e-52
Identity = 85/106 (80.19%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPKSR TYC    C  HQK KVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILR+KAKTTKK+VLR+EC  CK + QVP+KRTKHFELGG+KKRKGQMIQ+
Sbjct:    1 MVNIPKSRNTYCA--RCNKHQKMKVTQYKKSAESKQAQGRRRYDRKQQGFGGQSKPILRRKAKTTKKLVLRIECSSCKWKHQVPIKRTKHFELGGEKKRKGQMIQY 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|1325264062|ref|XP_023334695.1| (60S ribosomal protein L44-like [Eurytemora affinis])

HSP 1 Score: 167.933 bits (424), Expect = 5.578e-52
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC   +C  HQK KVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILR+KAKTTKK+VLR+EC +CK + Q+P+KRTKHFELGG+KKRKGQMIQF
Sbjct:    1 MVNIPKARNTYCA--KCNKHQKMKVTQYKKSAESKQAQGRRRYDRKQQGFGGQSKPILRRKAKTTKKLVLRIECSQCKWKHQIPIKRTKHFELGGEKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|1325284322|ref|XP_023326864.1| (60S ribosomal protein L44-like [Eurytemora affinis])

HSP 1 Score: 167.548 bits (423), Expect = 7.845e-52
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC   +C  HQK KVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILR+KAKTTKK+VLR+EC +CK + Q+P+KRTKHFELGG+KKRKGQMIQF
Sbjct:    7 MVNIPKARNTYCA--KCNKHQKMKVTQYKKSAESKQAQGRRRYDRKQQGFGGQSKPILRRKAKTTKKLVLRIECSQCKWKHQIPIKRTKHFELGGEKKRKGQMIQF 110
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|961376892|gb|ALS05190.1| (60S ribosomal protein L44 [Tortanus dextrilobatus])

HSP 1 Score: 167.548 bits (423), Expect = 7.924e-52
Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPKSR TYC   +C  H K KVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILR+KAKTTKK+VLR+EC  CK + Q+P+KRTKHFELGG+KKRKGQMIQF
Sbjct:    1 MVNIPKSRNTYCA--KCNKHNKMKVTQYKKSAESKTAQGRRRYDRKQQGFGGQSKPILRRKAKTTKKLVLRIECSVCKWKHQIPIKRTKHFELGGEKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|961376586|gb|ALS05037.1| (60S ribosomal protein L44 [Centropages dorsispinatus])

HSP 1 Score: 163.696 bits (413), Expect = 2.538e-50
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+R TYC    C  H K KVTQYKKS ESK AQGRRRYDRKQQGFGGQSKPILR+KAKTTKK+VLR+EC  C+ + QV +KRTKHFELGG+KKRKGQMIQF
Sbjct:    1 MVNIPKARNTYCA--RCNKHNKMKVTQYKKSAESKTAQGRRRYDRKQQGFGGQSKPILRRKAKTTKKLVLRIECSVCEWKNQVAIKRTKHFELGGEKKRKGQMIQF 104
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|1191600631|gb|OTF79112.1| (60S ribosomal protein L44-like protein [Euroglyphus maynei])

HSP 1 Score: 162.925 bits (411), Expect = 4.947e-50
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PKSRRT+C   +C+ H   KVTQYKK +ES  AQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLR+EC +CK R Q+P+KR KHFE+GGDKKRKGQMIQF
Sbjct:    1 MVNVPKSRRTFCKG-KCKKHTLHKVTQYKKGKESSAAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRMECSECKTRKQIPIKRCKHFEIGGDKKRKGQMIQF 105
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|1048035066|ref|XP_017491622.1| (PREDICTED: 60S ribosomal protein L44 [Rhagoletis zephyria])

HSP 1 Score: 162.925 bits (411), Expect = 5.582e-50
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVN+PK+RRTYC   +C+ H   KVTQYKK +ES  AQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLR+EC +CK R Q+P+KR KHFE+GGDKKRKGQMIQF
Sbjct:    1 MVNVPKTRRTYCKG-KCKKHTLHKVTQYKKGKESNAAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRMECSECKARKQLPIKRCKHFEIGGDKKRKGQMIQF 105
[Close]
BLAST of 60s ribosomal protein l44 vs. nr
Match: gi|457867029|emb|CCQ18625.1| (60S ribosomal protein L44 [Sycon ciliatum])

HSP 1 Score: 161.77 bits (408), Expect = 1.463e-49
Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MVNIPKSRRTYCPYLECRNHQKFKVTQYKKSQESKFAQGRRRYDRKQQGFGGQSKPILRKKAKTTKKIVLRLECQKCKKRIQVPLKRTKHFELGGDKKRKGQMIQF 106
            MVNIPK+RRT+CP  +C+ H   KVTQYKK ++S FAQG+RRYDRKQ+GFGGQ+KP+  KKAKTTKKIVL+LEC  CK+R Q+P+KR KHFELGGDKKRKGQMIQF
Sbjct:    1 MVNIPKTRRTHCPAAKCKKHTLHKVTQYKKGKDSLFAQGKRRYDRKQRGFGGQTKPVFHKKAKTTKKIVLKLECTVCKQRRQLPIKRCKHFELGGDKKRKGQMIQF 106
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l44 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000069369.100e-6490.57supercontig:LSalAtl2s:LSalAtl2s393:565159:565727:-... [more]
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BLAST of 60s ribosomal protein l44 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|31340370|sp|Q9NB33.3|RL44_OCHTR6.815e-5076.42RecName: Full=60S ribosomal protein L44[more]
gi|1350749|sp|P48166.2|RL36A_CAEEL2.990e-4972.64RecName: Full=Ribosomal protein rpl-36.A; AltName:... [more]
gi|3122756|sp|P90702.3|RL44_BRUMA1.692e-4770.75RecName: Full=60S ribosomal protein L44[more]
gi|47605970|sp|P61485.2|RL36A_DANRE3.330e-4568.52RecName: Full=60S ribosomal protein L36a >gi|47605... [more]
gi|57013007|sp|Q969Q0.3|RL36L_HUMAN1.355e-4468.52RecName: Full=60S ribosomal protein L36a-like; Alt... [more]
gi|47117720|sp|P83883.2|RL36A_RAT4.779e-4467.59RecName: Full=60S ribosomal protein L36a; AltName:... [more]
gi|62511104|sp|Q5R9D2.3|RL36L_PONAB6.788e-4467.59RecName: Full=60S ribosomal protein L36a-like[more]
gi|132966|sp|P27074.2|RL44Q_CANMA1.296e-4366.04RecName: Full=60S ribosomal protein L44 Q; AltName... [more]
gi|132967|sp|P27075.2|RL44_CANTR1.310e-4366.04RecName: Full=60S ribosomal protein L44; AltName: ... [more]
gi|2500380|sp|Q96499.3|RL44_GOSHI2.036e-4365.38RecName: Full=60S ribosomal protein L44[more]

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BLAST of 60s ribosomal protein l44 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225708866|gb|ACO10279.1|8.523e-6090.5760S ribosomal protein L44 [Caligus rogercresseyi] ... [more]
gi|961375814|gb|ALS04651.1|1.431e-5280.1960S ribosomal protein L44 [Pseudodiaptomus poplesi... [more]
gi|509391740|gb|AGN29651.1|4.890e-5280.1960S ribosomal protein L44 [Acartia pacifica] >gi|9... [more]
gi|1325264062|ref|XP_023334695.1|5.578e-5279.2560S ribosomal protein L44-like [Eurytemora affinis... [more]
gi|1325284322|ref|XP_023326864.1|7.845e-5279.2560S ribosomal protein L44-like [Eurytemora affinis... [more]
gi|961376892|gb|ALS05190.1|7.924e-5279.2560S ribosomal protein L44 [Tortanus dextrilobatus][more]
gi|961376586|gb|ALS05037.1|2.538e-5077.3660S ribosomal protein L44 [Centropages dorsispinat... [more]
gi|1191600631|gb|OTF79112.1|4.947e-5077.3660S ribosomal protein L44-like protein [Euroglyphu... [more]
gi|1048035066|ref|XP_017491622.1|5.582e-5077.36PREDICTED: 60S ribosomal protein L44 [Rhagoletis z... [more]
gi|457867029|emb|CCQ18625.1|1.463e-4973.5860S ribosomal protein L44 [Sycon ciliatum][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold316_size209483supercontigscaffold316_size209483:154436..155582 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold316_size209483-snap-gene-1.40-mRNA-1maker-scaffold316_size209483-snap-gene-1.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold316_size209483:154436..155582-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold316_size209483-snap-gene-1.40 ID=maker-scaffold316_size209483-snap-gene-1.40|Name=60s ribosomal protein l44|organism=Tigriopus kingsejongensis|type=gene|length=1147bp|location=Sequence derived from alignment at scaffold316_size209483:154436..155582- (Tigriopus kingsejongensis)
CGCCAGCGGGGGGTTCGAGAGCTTCGTCGGCCAGGTTGCGTGAGCCGCGA
GGTTGCGCGAGCTCAACTATGTTCCGAAGCGCGTCGGATTCGACATTGAG
AATGTGACATCAGCTGGACAACTCCAGCGATCGTTCTTTCCCTTTCCGGC
CCTGCTAGAGCTGAGAGAACAAAAATGGTGAGTCTGAGCGTGGCTAAATC
CGCCCATATCTTGCCAAAGCGTTGAGTACGATCCTCCGTCCCCCCAGGGA
GGCTCGACAATTAACCTTTGGCCTAGTAACGCCCTCGATTTCCATGTCCG
CCGGGTCCCATCCATGACTTGGGCGGACTTCCAGATTGAGGCACACGACG
GCTCGCCGAGCTTGGCCCCCTTCCCGCCCCGCCGGACGAACGGTAGCTCA
TGCTCGTGATGCCTTACTTTTCTAGGTGAACATTCCCAAATCCCGCCGGA
CTTACTGTCCGTACCTCGAGTGCCGGAACCACCAGAAGTTCAAGGTGACC
CAATACAAGAAGTCGCAAGAGTCCAAGTTCGCTCAGGGCCGAAGGCGTTA
CGACCGGAAGCAGCAAGGTTTCGGAGGTCAATCCAAGCCCATCCTCCGTA
AGAAGGTAAGAGTCCCAAGCCTGCCCGAGCTACGGGTTGGCCGGATGAAG
TCCGATCTCGTGGACGGAGACGGCCCACGCGGGCCAGGAGGCTTCCTAGT
CCCAGGAGTTAAGCCCAGAGGTGGCGAGCCCCAGGCACAGGGCCAGGGGG
TGATCGGGATGCGGTGTTCGGGATGCGGTGTTCGGGATGCGGTGTCTGGT
CGCTAACGAAGGCCTTTTCTCCTTGCAGGCGAAGACCACCAAGAAGATTG
TGCTCCGTCTCGAGTGTCAAAAGTGCAAGAAGAGGATCCAGGTCCCCTTG
AAGCGCACCAAGCATTTCGAGTTGGGTGGCGACAAGAAGCGCAAGGGCCA
GATGATCCAGTTCTAGGTCGTCCCAACCCCTACATTGCTATACTGTTGTC
CCCGCCCCGGTCGTGCCCCGAGTCACTTGGTCCACGAGACGCGTCATCTG
CCTCCCGGATTGACCGTGGCCATCGTCTGTCCCGTGATGGGCGGGCGCGA
TCTCGGTCGCCTGATGTGTGTCCAATAAAACAAAAAAAAACAAAAAA
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Synonyms
The feature '60s ribosomal protein l44' has the following synonyms
Synonym
Tk05943
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