GL22501, maker-scaffold319_size207808-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL22501 vs. L. salmonis genes
Match: EMLSAG00000003800 (supercontig:LSalAtl2s:LSalAtl2s2069:97:7472:-1 gene:EMLSAG00000003800 transcript:EMLSAT00000003800 description:"maker-LSalAtl2s2069-augustus-gene-0.7") HSP 1 Score: 191.045 bits (484), Expect = 5.277e-56 Identity = 93/134 (69.40%), Postives = 110/134 (82.09%), Query Frame = 0 Query: 96 LVPTHHA---NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 + P H QVSL L EFIVQR+YH+L++L+ELLPRK DMERKIEIFNFASRTRM+ IRLL LVKWASSASKVDKC SI+N+ ER F +TAD+ AK++R++L RA LPNF+LP+AVEILTTGSYSRVP Sbjct: 17 VAPQHQGAGGGQVSLGMLTEFIVQRTYHELSILSELLPRKEDMERKIEIFNFASRTRMLFIRLLSLVKWASSASKVDKCGSIINYLERQXRXFXETADSXAKIARDSLPRAXLPNFNLPSAVEILTTGSYSRVP 150
BLAST of GL22501 vs. SwissProt
Match: gi|26398152|sp|Q9P7Y4.2|MED14_SCHPO (RecName: Full=Mediator of RNA polymerase II transcription subunit 14; AltName: Full=Mediator complex subunit 14; AltName: Full=Mediator of RNA polymerase II complex subunit pmc1) HSP 1 Score: 59.6918 bits (143), Expect = 3.535e-9 Identity = 35/119 (29.41%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 107 LSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRV 225 L +++E +L LAE+LP +++E+K +I ++ R+R +RLL L +W + V +C ++ F + F + L + R L A L N L A++IL+TG+ R+ Sbjct: 16 LPEIVETFSHHVLQELVSLAEVLPSMSNVEKKKKILDWLLRSRAFTMRLLVLARWVHLSPSVHRCIDVVAFLQGQKFCFQNLVHVLQDI-RYQLSFARLRNSDLVTALDILSTGTSLRL 133
BLAST of GL22501 vs. SwissProt
Match: gi|75207288|sp|Q9SR02.1|MED14_ARATH (RecName: Full=Mediator of RNA polymerase II transcription subunit 14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP) HSP 1 Score: 56.225 bits (134), Expect = 5.292e-8 Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 0 Query: 133 TDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 +D E+K+ + + ++T+ ++RL L KW ++ + + F AD+L M E L +A P + +P+AVEIL TGSY R+P Sbjct: 39 SDTEKKVSLLKYVAKTQQRMLRLNALAKWCKQVPLINYFQDLGSTLSAHDICFTQAADSLFFM-HEGLQQARAPVYDVPSAVEILLTGSYQRLP 131
BLAST of GL22501 vs. SwissProt
Match: gi|218511682|sp|Q6BPK1.2|MED14_DEBHA (RecName: Full=Mediator of RNA polymerase II transcription subunit 14; AltName: Full=Mediator complex subunit 14) HSP 1 Score: 54.299 bits (129), Expect = 2.232e-7 Identity = 49/182 (26.92%), Postives = 77/182 (42.31%), Query Frame = 0 Query: 53 AAHPMLMGAGGHTPGGTSLHPAGNGA-------HTPG----GVGPALQ--VHNHSALVPTHHANQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDME----RKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEIL 217 A +L+ G P +S +P NG H G GVG L+ + + +P N + LS +++F Q +Y LT E L D E RK N R I++ LVKWASS+ + K ++N+ F L +++R + A LPN + ++E+ Sbjct: 31 AKQTLLLNMNGSYP--SSNNPISNGEPCDAKSNHLGGEMHNGVGSKLENGILKKAPDIPHITNNIIPLSNVLKFYTQEAYKQLTTAIENLSSTKDTENDSSRKKFFLNLIISLRQDFIKIYTLVKWASSSKDISKLIDLLNWFRSQDFYFEQLGYGLNELNRYS--GAKLPNSDIITSLEVF 208
BLAST of GL22501 vs. SwissProt
Match: gi|158512654|sp|A1DG38.1|MED14_NEOFI (RecName: Full=Mediator of RNA polymerase II transcription subunit 14; AltName: Full=Mediator complex subunit 14) HSP 1 Score: 53.5286 bits (127), Expect = 3.808e-7 Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0 Query: 134 DMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTG 220 ++++K+ I +FA R I+LL L +W+ A V K + NF F+D + +M R+ LV+A + N L A+EIL+ G Sbjct: 128 NVQKKLRILDFAHAKRAEFIKLLVLSQWSRRAHDVSKLIDLQNFIRSRHQAFVDALQRVGEMKRD-LVQAQVANPDLQTALEILSKG 213
BLAST of GL22501 vs. nr
Match: gi|1325281068|ref|XP_023325206.1| (mediator of RNA polymerase II transcription subunit 14-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 210.69 bits (535), Expect = 4.865e-59 Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 0 Query: 81 PGGVGPALQVHNHSALVPTHHANQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 PGG+ ++ H P H QVSLS LI+ +QR+YH+LT+LAELLPRKTDMERK+EIFNFASRTRM+ IRLL LVKWASSASKVDKC +IM F E+ + IF+DTAD LA+M+RETLVRATLPNFHLPAA EILTTG Y+R+P Sbjct: 11 PGGM--MMETHQQ----PHHQPGQVSLSVLIDMFIQRTYHELTILAELLPRKTDMERKVEIFNFASRTRMLFIRLLALVKWASSASKVDKCNNIMMFLEKQSSIFLDTADQLARMARETLVRATLPNFHLPAAAEILTTGGYTRLP 150
BLAST of GL22501 vs. nr
Match: gi|1325281066|ref|XP_023325205.1| (mediator of RNA polymerase II transcription subunit 14-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 210.69 bits (535), Expect = 6.265e-59 Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 0 Query: 81 PGGVGPALQVHNHSALVPTHHANQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 PGG+ ++ H P H QVSLS LI+ +QR+YH+LT+LAELLPRKTDMERK+EIFNFASRTRM+ IRLL LVKWASSASKVDKC +IM F E+ + IF+DTAD LA+M+RETLVRATLPNFHLPAA EILTTG Y+R+P Sbjct: 11 PGGM--MMETHQQ----PHHQPGQVSLSVLIDMFIQRTYHELTILAELLPRKTDMERKVEIFNFASRTRMLFIRLLALVKWASSASKVDKCNNIMMFLEKQSSIFLDTADQLARMARETLVRATLPNFHLPAAAEILTTGGYTRLP 150
BLAST of GL22501 vs. nr
Match: gi|1108467014|emb|CRL04324.1| (CLUMA_CG017419, isoform A [Clunio marinus]) HSP 1 Score: 199.904 bits (507), Expect = 3.315e-55 Identity = 92/130 (70.77%), Postives = 112/130 (86.15%), Query Frame = 0 Query: 97 VPTHHANQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 +P + +SLS LI+FIVQR+YHDLTVLAELLPRKTDMERKIEI+NFA+RTR + IRLL LVKWA+SASKVDK A IMNF E+ + +F++TAD L KM+RETLV A LP+FH+PAAVE+LTTGSY+R+P Sbjct: 18 IPANQGGSISLSMLIDFIVQRTYHDLTVLAELLPRKTDMERKIEIYNFAARTRQLFIRLLALVKWANSASKVDKSALIMNFLEKQSMLFVETADLLTKMARETLVHARLPSFHIPAAVEVLTTGSYNRLP 147
BLAST of GL22501 vs. nr
Match: gi|1285031408|ref|XP_023028052.1| (mediator of RNA polymerase II transcription subunit 14-like [Leptinotarsa decemlineata]) HSP 1 Score: 191.045 bits (484), Expect = 3.817e-55 Identity = 85/122 (69.67%), Postives = 110/122 (90.16%), Query Frame = 0 Query: 105 VSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 +SL+ LI+FIVQR+YH+LTVLAELLPRKTDMERKIEI+NF++RTR + +RLL LVKWA+SASKV+K A IMNF ++ + +F++TAD LA+M+RETLV+A LPNFH+PAAVE+LTTG+Y R+P Sbjct: 34 MSLAMLIDFIVQRTYHELTVLAELLPRKTDMERKIEIYNFSTRTRQLFVRLLALVKWANSASKVEKSARIMNFLDKQSLLFVETADMLARMARETLVQARLPNFHIPAAVEVLTTGTYGRLP 155
BLAST of GL22501 vs. nr
Match: gi|195167689|ref|XP_002024665.1| (GL22501 [Drosophila persimilis] >gi|194108070|gb|EDW30113.1| GL22501 [Drosophila persimilis]) HSP 1 Score: 184.496 bits (467), Expect = 6.116e-54 Identity = 83/124 (66.94%), Postives = 107/124 (86.29%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +S+S LI+FI+QR+YH+LTVLAELLPRKTDMERKIEI+N+A+RTR + RL LVKW +S SKVDK + IM+F ++ +F++TAD LA+MSRETLVRA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 29 NTMSMSMLIDFIIQRTYHELTVLAELLPRKTDMERKIEIYNYAARTRHLFTRLNALVKWGNSVSKVDKSSQIMSFLDKQNMLFVETADMLARMSRETLVRARLPNFHIPAAVEVLTTGTYNRLP 152
BLAST of GL22501 vs. nr
Match: gi|1048017401|ref|XP_017469746.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Rhagoletis zephyria]) HSP 1 Score: 195.667 bits (496), Expect = 1.122e-53 Identity = 86/124 (69.35%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +SL+ LI+FI+QR+YHDLTVLAELLPRKTDMERKIEI+NF++RTR + IRL+ LVKWA+S SKVDK A+IM+F ++ +F++TAD LA+MSRETL+RA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 31 NTISLAVLIDFIIQRTYHDLTVLAELLPRKTDMERKIEIYNFSARTRQLFIRLIALVKWANSVSKVDKSANIMSFLDKQNMLFIETADMLARMSRETLIRARLPNFHIPAAVEVLTTGTYNRLP 154
BLAST of GL22501 vs. nr
Match: gi|498934573|ref|XP_004519909.1| (mediator of RNA polymerase II transcription subunit 14 [Ceratitis capitata]) HSP 1 Score: 195.282 bits (495), Expect = 1.284e-53 Identity = 86/124 (69.35%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +SL+ LI+FI+QR+YHDLTVLAELLPRKTDMERKIEI+NF++RTR + IRL+ LVKWA+S SKVDK A+IM+F ++ +F++TAD LA+MSRETL+RA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 31 NTISLAVLIDFIIQRTYHDLTVLAELLPRKTDMERKIEIYNFSARTRQLFIRLIALVKWANSVSKVDKSANIMSFLDKQNMLFIETADMLARMSRETLIRARLPNFHIPAAVEVLTTGTYNRLP 154
BLAST of GL22501 vs. nr
Match: gi|929377657|ref|XP_014099068.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Bactrocera oleae]) HSP 1 Score: 195.282 bits (495), Expect = 1.361e-53 Identity = 86/124 (69.35%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +SL+ LI+FI+QR+YHDLTVLAELLPRKTDMERKIEI+NF++RTR + IRL+ LVKWA+S SKVDK A+IM+F ++ +F++TAD LA+MSRETL+RA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 31 NTISLAVLIDFIIQRTYHDLTVLAELLPRKTDMERKIEIYNFSARTRQLFIRLISLVKWANSVSKVDKSANIMSFLDKQNMLFIETADMLARMSRETLIRARLPNFHIPAAVEVLTTGTYNRLP 154
BLAST of GL22501 vs. nr
Match: gi|1098655499|ref|XP_018791654.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X1 [Bactrocera latifrons] >gi|1098655503|ref|XP_018791655.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X1 [Bactrocera latifrons] >gi|1098655506|ref|XP_018791656.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X2 [Bactrocera latifrons] >gi|1098655509|ref|XP_018791658.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X3 [Bactrocera latifrons] >gi|1098655511|ref|XP_018791659.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X4 [Bactrocera latifrons] >gi|1098655515|ref|XP_018791660.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X5 [Bactrocera latifrons]) HSP 1 Score: 195.282 bits (495), Expect = 1.401e-53 Identity = 86/124 (69.35%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +SL+ LI+FI+QR+YHDLTVLAELLPRKTDMERKIEI+NF++RTR + IRL+ LVKWA+S SKVDK A+IM+F ++ +F++TAD LA+MSRETL+RA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 31 NTISLAVLIDFIIQRTYHDLTVLAELLPRKTDMERKIEIYNFSARTRQLFIRLISLVKWANSVSKVDKSANIMSFLDKQNMLFIETADMLARMSRETLIRARLPNFHIPAAVEVLTTGTYNRLP 154
BLAST of GL22501 vs. nr
Match: gi|751783231|ref|XP_011200853.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Bactrocera dorsalis] >gi|1132381169|ref|XP_019845177.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Bactrocera dorsalis] >gi|1132381172|ref|XP_019845178.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Bactrocera dorsalis] >gi|1132381174|ref|XP_019845179.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Bactrocera dorsalis]) HSP 1 Score: 195.282 bits (495), Expect = 1.470e-53 Identity = 86/124 (69.35%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 103 NQVSLSQLIEFIVQRSYHDLTVLAELLPRKTDMERKIEIFNFASRTRMILIRLLGLVKWASSASKVDKCASIMNFCERSAGIFMDTADALAKMSRETLVRATLPNFHLPAAVEILTTGSYSRVP 226 N +SL+ LI+FI+QR+YHDLTVLAELLPRKTDMERKIEI+NF++RTR + IRL+ LVKWA+S SKVDK A+IM+F ++ +F++TAD LA+MSRETL+RA LPNFH+PAAVE+LTTG+Y+R+P Sbjct: 31 NTISLAVLIDFIIQRTYHDLTVLAELLPRKTDMERKIEIYNFSARTRQLFIRLISLVKWANSVSKVDKSANIMSFLDKQNMLFIETADMLARMSRETLIRARLPNFHIPAAVEVLTTGTYNRLP 154 The following BLAST results are available for this feature:
BLAST of GL22501 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of GL22501 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 14
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BLAST of GL22501 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold319_size207808:29827..31644- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold319_size207808-snap-gene-0.23 ID=maker-scaffold319_size207808-snap-gene-0.23|Name=GL22501|organism=Tigriopus kingsejongensis|type=gene|length=1818bp|location=Sequence derived from alignment at scaffold319_size207808:29827..31644- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL22501' has the following synonyms
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