leucine-rich repeat-containing protein 55, maker-scaffold321_size207582-snap-gene-1.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000009829 (supercontig:LSalAtl2s:LSalAtl2s63:1003125:1030351:1 gene:EMLSAG00000009829 transcript:EMLSAT00000009829 description:"maker-LSalAtl2s63-augustus-gene-10.41") HSP 1 Score: 68.5514 bits (166), Expect = 6.570e-14 Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 0 Query: 73 LKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLR 196 L + LDLS+N ++ I PG L NL+ + L N + K+ D F+G T + L LS+N+ +P +AL+ LP+L N I + + L+E+ L YN IS + N F + +L+ Sbjct: 314 LSSLEYLDLSRNNIHEIIPGTFLGIGNLKGLDLSVNSLRKVEDDAFEGLTSLEYLDLSDNKISQLPSNALERLPNLKRFKAHHNTIDSISSEDFIPIQDLEELNLSYNMISQIFPNTFASLSSLK 438 HSP 2 Score: 60.077 bits (144), Expect = 4.355e-11 Identity = 40/141 (28.37%), Postives = 65/141 (46.10%), Query Frame = 0 Query: 79 LDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTF-----QGTQIHTLSLSNNE------------------------FLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFK 190 LD+S N+++ I G P L+ + L N +S D F T +HTL +S+NE F P ++ LP+L +L L N+++ + ++ A F LK + LE+N++ SVS AF+ Sbjct: 580 LDISSNKISMIKKGAFDSIPRLKTIDLSHNQLSSYKDDYFFNMYPNDTDLHTLDISHNELTYLYPESFRFHQLLERVDFSNNLFSFFPTQFMKDLPNLKTLNLRHNLLKNIDDSEFANFLSLKVLNLEHNEVESVSETAFQ 720
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000012107 (supercontig:LSalAtl2s:LSalAtl2s869:139642:146365:-1 gene:EMLSAG00000012107 transcript:EMLSAT00000012107 description:"maker-LSalAtl2s869-augustus-gene-1.6") HSP 1 Score: 61.6178 bits (148), Expect = 1.284e-11 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 0 Query: 55 KLLEIPPELLALGDSGPDLK--NFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG--TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 ++L++ LL DSG L N L L+ N L ++ + ++LDSN +S L + F + ++ L+LSNN F +P D LQ L L +L L N I+ + G + L +KL N I+++S + FKP+P ++ L Sbjct: 357 QILDLSHNLLTTLDSGTFLSQNNLHILRLNHNDLKSLHARSFDGLSVVSSINLDSNALSALEENAFLDCCSTLNDLTLSNNRFSRVP-DGLQGLDGLKTLDLGGNNIKEIHNGSFTGLRALYGLKLSSNGITNISESIFKPIPGVQVL 503 HSP 2 Score: 60.4622 bits (145), Expect = 3.568e-11 Identity = 39/134 (29.10%), Postives = 67/134 (50.00%), Query Frame = 0 Query: 73 LKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQ--------IHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 L + L+LS N L ++PPG + L ++L N + + +F ++ + L LS+N +++IP AL + L +L L N I + +N + LK + L NQ+ ++ + F P P+LREL Sbjct: 152 LDHLRSLNLSHNNLWSVPPGTFCRLSGLSTLNLSFNRLQDMHELSFSPSKRSTSCKLPLENLILSDNSYVEIPSQALSHVSKLETLELSSNAINLVQDNAFDNLRDLKYLSLANNQLIALPPHTFAPTPHLREL 285
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000009445 (supercontig:LSalAtl2s:LSalAtl2s606:34459:71415:-1 gene:EMLSAG00000009445 transcript:EMLSAT00000009445 description:"maker-LSalAtl2s606-snap-gene-0.6") HSP 1 Score: 60.077 bits (144), Expect = 4.506e-11 Identity = 39/128 (30.47%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 72 DLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 ++ + LDLS NRL +P G + PNL + L N + ++ F G ++TL +S+N+ +P D P L L L+ N+ + E L L+ + +N+I S+ F +PNLR L Sbjct: 536 NITSLKHLDLSYNRLYNLPDGVFRQLPNLVTLILSGNNMHTVSAGAFYGLNHLNTLVMSHNQLKILPRDCFGYAPRLQELELDYNLFESISE--LRALNELRTLNYNHNRIRSLKRENFLHMPNLRGL 661 HSP 2 Score: 50.447 bits (119), Expect = 8.318e-8 Identity = 52/191 (27.23%), Postives = 85/191 (44.50%), Query Frame = 0 Query: 34 VSAFCPKKCTCSPNEIVCRNQKLLEIPPEL--------LALGDSG-----PD----LKNFTKLDLSQNRLNAIPPGFLLKFP-NLQEVHLDSNGISKLAGDTFQGTQIH-------TLSLSNNEFLDIPFDALQ-SLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 +S K T S +++ N L IPP LA+ S PD L+ DLS N L +IP G + L ++L N S+L G + TL LS N ++P+ + + + L +L L+ N + + E+ G +L+ + L YN+++ +S +F+ + NLREL Sbjct: 96 LSILKKMKPTASVRDVLIVNCNLRRIPPASVLPTTLHGLAVRQSTGINFTPDDLVPLQYLKTFDLSDNALGSIPSGAVCPIKETLLHLNLAGNRFSRLEDSGVVGNKTECNLDHLITLQLSGNRLQELPYKSFKMAGHDLRTLKLDHNQVNTVTEDAFEGLDKLRLLDLSYNRLNLLSEGSFESLHNLREL 286
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000002123 (supercontig:LSalAtl2s:LSalAtl2s139:109009:110985:-1 gene:EMLSAG00000002123 transcript:EMLSAT00000002123 description:"maker-LSalAtl2s139-augustus-gene-1.27") HSP 1 Score: 59.6918 bits (143), Expect = 6.024e-11 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 0 Query: 71 PDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSV 184 P L T+L+LSQNRL +IP + PNL+ ++L +N +L + G + ++L+ N F IP +++ S P L L + N I + + L KRL + L YN I +V Sbjct: 479 PILSKITELNLSQNRLESIPESLQTQAPNLEFINLSNN---RLTTFNYYGNFLREINLTQNRFTAIP-ESMYSCPKLEILIISENKITEIDVDSLTKIKRLATLDLSYNDIKTV 588
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000009770 (supercontig:LSalAtl2s:LSalAtl2s633:151998:153807:-1 gene:EMLSAG00000009770 transcript:EMLSAT00000009770 description:"maker-LSalAtl2s633-augustus-gene-1.14") HSP 1 Score: 59.6918 bits (143), Expect = 6.051e-11 Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 0 Query: 38 CPKKCTC----SPNEIVCRNQKLLEIPPEL------LALGDSG--------PDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLIS-LGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVS 185 C + C C P E+ C N + IP +L L L D+ + LDLSQN +N I P + L ++ L N +S+L F+G + TLSL N+ ++ + SL+ L L N I N G K+LK + L +N+++S+S Sbjct: 23 CDRSCECIPKEDPMEVSCINASIHIIPQDLPPYIEFLDLKDNAIVVIESTLSHYEELISLDLSQNLINTIRPRAFSRLGTLNQLDLSRNQLSRLNALDFEGLAGLKTLSLKGNQITELHQKVFSNSVSLLEHLDLSNNQIYTFSHNVFHGLKKLKSLDLSHNRLTSMS 190
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000008016 (supercontig:LSalAtl2s:LSalAtl2s477:388792:422860:1 gene:EMLSAG00000008016 transcript:EMLSAT00000008016 description:"maker-LSalAtl2s477-augustus-gene-3.27") HSP 1 Score: 58.151 bits (139), Expect = 2.180e-10 Identity = 40/134 (29.85%), Postives = 65/134 (48.51%), Query Frame = 0 Query: 66 LGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 + ++ D+ LDLS N L I G P++ + LD N I ++ F ++ LS + N I LPSL SL + N+I+ L +N LK++ L+ N I +++ AFK +P++R L Sbjct: 622 ISEAFKDMPALKYLDLSYNHLPIIEKGTFSDLPSILSLKLDHNSIVEIVPGAFDRLWKLDKLSFTKNGLQTIKTKTFTDLPSLESLYINDNLIKSLEDNSFEDLYSLKKLYLDQNLIVNINERAFKRIPSVRYL 755 HSP 2 Score: 47.7506 bits (112), Expect = 8.144e-7 Identity = 34/114 (29.82%), Postives = 56/114 (49.12%), Query Frame = 0 Query: 72 DLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT---QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQIS 182 +LK+ ++LS+NR+ + N++++ L+ N I L+ F ++ L LS NE DIPF +S P L L L N I + LA L E+ L +N+++ Sbjct: 304 NLKSLKIINLSRNRIERFMSDAFVDSSNIEKLFLNRNKIQSLSDINFLMDTLPRLRYLELSENEIRDIPFGVFRSYPKLERLFLSGNQISQISTEGLADMPSLSELDLSHNKLN 417
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000008764 (supercontig:LSalAtl2s:LSalAtl2s543:55755:60198:-1 gene:EMLSAG00000008764 transcript:EMLSAT00000008764 description:"maker-LSalAtl2s543-augustus-gene-0.22") HSP 1 Score: 56.6102 bits (135), Expect = 6.428e-10 Identity = 41/125 (32.80%), Postives = 58/125 (46.40%), Query Frame = 0 Query: 75 NFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 N L LS+N L I L +L+ + LD N I L TF+ T++ L L+NN +P +A L +LI L L N+I + G LK +++ N +S V AFK L L Sbjct: 363 NLVILTLSRNELETIQYKTLEGLTHLESLFLDHNKIHSLQSGTFENCTRLQKLKLNNNYLTQVP-NAFHDLEALIYLDLSSNVIGVIKRESFKGLGELKTLRIANNGLSRVGEGAFKDTSQLMHL 486 HSP 2 Score: 47.7506 bits (112), Expect = 6.319e-7 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = 0 Query: 69 SGPDLKNFTKLD---LSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKP 191 SG +N + L+ L N + +I PG + P+L + + +NG+ L D FQG + L LS+N + +P D + L L SL + N + + N + LK + L N S+ N KP Sbjct: 183 SGKYCQNISSLESLILKGNSIQSISPGAISALPSLLSLDISNNGLRVLVNDAFQGLGNLKFLDLSHNALVALPPDIFKGLSKLESLSIGNNSLGTIDINVFSNLGSLKSLNLSGN---SLDENWLKP 306
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000003184 (supercontig:LSalAtl2s:LSalAtl2s176:575372:647076:1 gene:EMLSAG00000003184 transcript:EMLSAT00000003184 description:"augustus_masked-LSalAtl2s176-processed-gene-6.1") HSP 1 Score: 56.225 bits (134), Expect = 9.049e-10 Identity = 41/135 (30.37%), Postives = 60/135 (44.44%), Query Frame = 0 Query: 37 FCPKKCTCSPNEIVCRNQKLLEIPPEL------LAL---------GDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQ-IHTLSLSNNEFLDIPFDALQSLPSLISLGLERN 155 +CP +CTC+ + C + KL EIP L L L D LK+ ++LDLS N++N +PP L + + N + + D F G + + LSL N+ IP A S+ L L N Sbjct: 114 YCPPECTCTGTIVRCSHAKLTEIPEGLPRETSELYLDVNDIHSINSDRLKHLKSLSRLDLSNNKINVLPPVIFANLTRLATLIVSYNKLQCIQEDAFAGLKNLRILSLHGNDISTIPEKAFTHTSSITHLALGSN 248
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000006098 (supercontig:LSalAtl2s:LSalAtl2s330:308623:312741:-1 gene:EMLSAG00000006098 transcript:EMLSAT00000006098 description:"maker-LSalAtl2s330-augustus-gene-2.9") HSP 1 Score: 55.4546 bits (132), Expect = 1.399e-9 Identity = 37/127 (29.13%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 74 KNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFK-PVPNLREL 198 K K++ ++NR++ I + P+L+ ++L++N ++ + D F+ + L LS N F+ IP + + SLI+L L + L G L+++KL N++ S+ A + VPNL EL Sbjct: 158 KRLQKINFARNRISRISNTSFVDLPDLRILNLENNLLTSIPTDAFKPLVDLAELYLSGNPFISIPDGSFATFRSLIALDLSSCRLTSLSIGSFQGLGTLRKLKLSDNELKSIPDGAIRDSVPNLEEL 284
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Match: EMLSAG00000003873 (supercontig:LSalAtl2s:LSalAtl2s2103:8079:11261:1 gene:EMLSAG00000003873 transcript:EMLSAT00000003873 description:"maker-LSalAtl2s2103-snap-gene-0.5") HSP 1 Score: 53.5286 bits (127), Expect = 5.026e-9 Identity = 39/152 (25.66%), Postives = 73/152 (48.03%), Query Frame = 0 Query: 72 DLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTF--------------QGTQIH------------TLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGF-KRLKEIKLEYNQISSVSVNAFKPVPNLR 196 +LKN +LDLS+N+++ I G L + L+ N I+ L + F Q +QIH +L+L+ N+ + P +AL+ L L +L ++ N + + EN GF + ++ + + N I+++ AF+ + +L Sbjct: 10 NLKNLDRLDLSENKIDEIHAGEFYGLEKLDTLILNDNQITALTENNFEDLDGLTSLYLDRNQISQIHENAFIGLEENLQSLTLTGNKLTEFPSEALRKLHQLTTLHIDDNSVTTIYENSFQGFGEHIRNLWFQNNHINNIPAPAFQYLHSLE 161
BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Match: gi|519668670|sp|Q9Z2H4.2|LGR4_RAT (RecName: Full=Leucine-rich repeat-containing G-protein coupled receptor 4; AltName: Full=G-protein coupled receptor 48; Flags: Precursor) HSP 1 Score: 67.0106 bits (162), Expect = 6.407e-12 Identity = 45/163 (27.61%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 38 CPKKCTCSPNEIV-CRNQKLLEIPPELLALGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 C C+C + V C + L +P L A + LD+S N + +P FP L+E+ L N +S + G ++ L+L NN+ +P +A+ L +L SL L+ N I + E+ G +L+ + L+ N ++ V V +P L+ L Sbjct: 29 CAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQA---------LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQAL 182 HSP 2 Score: 59.3066 bits (142), Expect = 2.869e-9 Identity = 39/127 (30.71%), Postives = 62/127 (48.82%), Query Frame = 0 Query: 73 LKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 LK L L N+L +P + LQ + LD+N I+ + D+F+G Q+ L L +N ++P L +LP+L +L L N I + + L + L N+I S+S + F + NL L Sbjct: 104 LKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETL 230
BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Match: gi|68052341|sp|Q86VH5.2|LRRT3_HUMAN (RecName: Full=Leucine-rich repeat transmembrane neuronal protein 3; Flags: Precursor >gi|68052376|sp|Q9BGP6.1|LRRT3_MACFA RecName: Full=Leucine-rich repeat transmembrane neuronal protein 3; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 9.217e-12 Identity = 65/225 (28.89%), Postives = 91/225 (40.44%), Query Frame = 0 Query: 14 SQIGWAIRSYFLLWLLTATHVSAFCPKKCTCSPNEIVCRNQKLLEIPPELLA--LG-------------DSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-----------QIHTLS--------------LSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 S + I LL +L++ CPK C C + C +QKL EIP + A LG + L T L L N ++ I L+E+ L SN IS +TF+ Q+H+L L +N IP Q +L L L N IR L N AG RLKE+ LE+NQ S +++ F + +L+ L Sbjct: 12 SAVALVIAPTVLLTMLSSAERG--CPKGCRCEGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNL 234
BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Match: gi|182662398|sp|A4IIW9.1|LIGO1_XENTR (RecName: Full=Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 1.075e-11 Identity = 45/164 (27.44%), Postives = 79/164 (48.17%), Query Frame = 0 Query: 38 CPKKCTCSPNE--IVCRNQKLLEIPPELLALGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CP++C CSP + ++C ++ L++P + + LDLS+NR+ A+ FP L+E+ L+ N +S + F G + +L L +N IP L +L L + N I L ++ LK +++ N + +S AF+ + +L EL Sbjct: 28 CPQRCDCSPQDRSVLCHRKRYLDVPEGIPT---------DTRLLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEEL 182
BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Match: gi|45477223|sp|Q9WVC1.3|SLIT2_RAT (RecName: Full=Slit homolog 2 protein; Short=Slit-2; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 1.189e-11 Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 0 Query: 38 CPKKCTCSPNEIVCRNQKLLEIPPELLALGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQ-IHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAF 189 CP CTCS N + CR + L EIP L P+ T++ L QN + IPPG + L+ + L +N IS+LA D FQG + +++L L N+ ++P + L SL L L N I L + L + L N++ +V+ F Sbjct: 277 CPIACTCSNNIVDCRGKGLTEIPTNL-------PE--TITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420 HSP 2 Score: 65.4698 bits (158), Expect = 1.823e-11 Identity = 46/163 (28.22%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 38 CPKKCTCSPNEIVCRNQKLLEIPPELLALGDSGPDLKNFTKLDLSQNRLNAI-PPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQ-IHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CP+KC C + C NQKL +IP D P +L L+ N + G K P L++++L +N I+ + F+G ++ + L++N ++ + L SL +L L N I +G + G ++ + L NQI++V+ AF + +L L Sbjct: 502 CPEKCRCEGTTVDCSNQKLNKIP-------DHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTL 655
BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Match: gi|68052348|sp|Q8BZ81.2|LRRT3_MOUSE (RecName: Full=Leucine-rich repeat transmembrane neuronal protein 3; Flags: Precursor) HSP 1 Score: 65.855 bits (159), Expect = 1.262e-11 Identity = 60/201 (29.85%), Postives = 82/201 (40.80%), Query Frame = 0 Query: 38 CPKKCTCSPNEIVCRNQKLLEIPPELLA--LG-------------DSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-----------QIHTLS--------------LSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CPK C C + C +QKL EIP + A LG + L T L L N ++ I L+E+ L SN IS +TF+ Q+H+L L +N IP Q +L L L N IR L N AG RLKE+ LE+NQ S +++ F + +L+ L Sbjct: 34 CPKGCRCEGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNL 234
BLAST of leucine-rich repeat-containing protein 55 vs. nr
Match: gi|1126190934|ref|XP_019628404.1| (PREDICTED: chondroadherin-like protein [Branchiostoma belcheri]) HSP 1 Score: 82.8037 bits (203), Expect = 5.062e-15 Identity = 61/175 (34.86%), Postives = 85/175 (48.57%), Query Frame = 0 Query: 25 LLWLLTATHVSAFCPKKCTCSPNEIVCRNQKLLEIPPELLALGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQG-TQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 LL+LL S CP++C C + + C + L EIP L P+ + T LDL N L + G P L +HLDS I ++ F ++H L LS N +P ALQ +P+L L L NII + N G L I+L+YNQI S+ + F + LR+L Sbjct: 10 LLFLLAHNFGSDACPEQCACL-SYVNCMGRALTEIPEGL-------PN--DTTTLDLRLNNLGRLAEGMFTAVPKLIYLHLDSTNIHEIHDFAFINLNRLHHLYLSQNSLSTVPCAALQVIPNLTHLRLSGNIISTIPPNCFEGIHNLYGIELDYNQIQSLHEDTFAGLHELRDL 174
BLAST of leucine-rich repeat-containing protein 55 vs. nr
Match: gi|961007256|ref|XP_014819647.1| (PREDICTED: chondroadherin-like protein [Calidris pugnax]) HSP 1 Score: 83.1889 bits (204), Expect = 5.232e-15 Identity = 62/179 (34.64%), Postives = 83/179 (46.37%), Query Frame = 0 Query: 38 CPKKCTCSP--NEIVCRNQKLLEIP---PELLALGD------------SGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CP+ C+CSP + C N+ L EIP P L D S P LK L L + + PG L NL ++L N +S LA F+G ++ L L +N F +P Q LP+LISL L+ N IR L E LAG L+ + L N I ++ A P L +L Sbjct: 369 CPQGCSCSPAFHHGSCENRDLREIPRGFPGDTRLLDLRRNTFRVVPPGSFPGLKELVSLHLQSCGIKVLQPGALRGLENLVYLYLTDNHLSTLAATAFEGAPRLAYLDLDHNTFTHLPAGTFQLLPNLISLHLQHNTIRELAEGDLAGAGGLRWLYLAGNAIKRIAPTALVPTKMLEKL 547
BLAST of leucine-rich repeat-containing protein 55 vs. nr
Match: gi|705669162|ref|XP_010114384.1| (PREDICTED: chondroadherin-like protein [Chlamydotis macqueenii]) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-15 Identity = 63/181 (34.81%), Postives = 85/181 (46.96%), Query Frame = 0 Query: 35 SAFCPKKCTCSPN--EIVCRNQKLLEIP---PELLALGD------------SGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGTQIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 S CP+ CTCSP+ C N+ L EIP PE L D + LK L L + A+ PG L +L ++L +N +S LA F+G L+L N F +P A Q LP+LISL L+ N IR L E L G + L+ + L N I ++ A P L +L Sbjct: 368 SGQCPRGCTCSPDFRHGSCENRDLREIPQGFPENTRLLDLRRNAFRTVPPGAFSGLKELVSLHLQSCGIEALRPGALQGLESLVYLYLTNNRLSTLAAAAFEGAP--RLALDRNTFTHLPVGAFQLLPNLISLHLQHNAIRELVEGDLVGARGLRWLYLAENAIRHIAPGALAPAKMLEKL 546
BLAST of leucine-rich repeat-containing protein 55 vs. nr
Match: gi|557290283|ref|XP_006027749.1| (PREDICTED: chondroadherin-like protein [Alligator sinensis]) HSP 1 Score: 82.8037 bits (203), Expect = 6.054e-15 Identity = 62/179 (34.64%), Postives = 87/179 (48.60%), Query Frame = 0 Query: 38 CPKKCTCSPN--EIVCRNQKLLEIPP------ELL---------ALGDSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CP+ C+CSP+ C N+ L +IP +LL L S P LKN L L ++ + PG L L ++L +N IS + F+G Q+ L L +N F +P LP+LISL L+ N I L ++ LAG K+L+ + L N IS VS A P L +L Sbjct: 375 CPEACSCSPDFQHSNCDNKGLQKIPKGFPGNTQLLDLRRNEFHSILKASFPGLKNLVSLHLQSCKIAELQPGALQGLKKLVYLYLSNNDISAIEAAAFEGAPQLTYLYLDHNRFTRMPRGTFSRLPNLISLHLQHNSISQLSDSDLAGAKQLRWLYLTGNSISQVSPTALGPAKMLEKL 553
BLAST of leucine-rich repeat-containing protein 55 vs. nr
Match: gi|1062847334|ref|XP_008929770.2| (PREDICTED: chondroadherin-like protein [Manacus vitellinus]) HSP 1 Score: 82.8037 bits (203), Expect = 6.098e-15 Identity = 62/179 (34.64%), Postives = 84/179 (46.93%), Query Frame = 0 Query: 38 CPKKCTCSPN--EIVCRNQKLLEIPPE------LLALG---------DSGPDLKNFTKLDLSQNRLNAIPPGFLLKFPNLQEVHLDSNGISKLAGDTFQGT-QIHTLSLSNNEFLDIPFDALQSLPSLISLGLERNIIRGLGENRLAGFKRLKEIKLEYNQISSVSVNAFKPVPNLREL 198 CP+ C CSP+ C N+ L EIP + LL L D+ P L+ L L + A+ PG L +L ++L N +S LA F+G Q+ L L N F +P A Q LP+LISL L N I L E LAG + L+ + L N I ++ A P L +L Sbjct: 369 CPQGCVCSPDFHHGSCENRNLQEIPRDFPRDTRLLDLRRNTFRTVPPDAFPGLEELVSLHLQSCSIRALQPGALRGLESLVYLYLTDNRLSTLAAAAFEGAPQLAYLDLDRNAFTRMPAGAFQLLPNLISLHLRHNAIGELAEGDLAGARGLRWLYLTGNAIRHIAPAALAPAKMLEKL 547 The following BLAST results are available for this feature:
BLAST of leucine-rich repeat-containing protein 55 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 19
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BLAST of leucine-rich repeat-containing protein 55 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of leucine-rich repeat-containing protein 55 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold321_size207582:92895..98736+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold321_size207582-snap-gene-1.24 ID=maker-scaffold321_size207582-snap-gene-1.24|Name=leucine-rich repeat-containing protein 55|organism=Tigriopus kingsejongensis|type=gene|length=5842bp|location=Sequence derived from alignment at scaffold321_size207582:92895..98736+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'leucine-rich repeat-containing protein 55' has the following synonyms
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