cuticle protein, maker-scaffold324_size206069-snap-gene-1.25 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000007669 (supercontig:LSalAtl2s:LSalAtl2s446:41257:76039:1 gene:EMLSAG00000007669 transcript:EMLSAT00000007669 description:"augustus-LSalAtl2s446-processed-gene-2.13") HSP 1 Score: 123.25 bits (308), Expect = 1.714e-34 Identity = 90/176 (51.14%), Postives = 107/176 (60.80%), Query Frame = 0 Query: 5 ILCLTALAAVAIADDAPYRP--PQPSYKPTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE-NGYVADVKYDGEAQYPKYEPQ---SYKSEPKGYSPAPAYKPAPTPAYQPASSQAYSPAP 174 IL LA IAD P P PSYKP + P+P+YKPAP+ YQPA Y + YNYQYAV D+YS NF+ E+ D +G Y VALPDGR Q V+YT D +G+VADV+Y G YPKYEP+ SYK P Y+ APAYKPAP+PAY+PA AY PAP Sbjct: 78 ILAYVFLATTVIADSPPLVSYAPSPSYKPAPAPSXQPAPSYKPAPA--YQPA-------TYDESPKPYNYQYAVSDDYSGVNFSAEENSDAKVISGSYSVALPDGRIQTVSYTVDGYSGFVADVQYQGTPTYPKYEPKPSSSYKPAPT-YNTAPAYKPAPSPAYKPAPVPAYKPAP 243
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000012059 (supercontig:LSalAtl2s:LSalAtl2s85:1250196:1251194:1 gene:EMLSAG00000012059 transcript:EMLSAT00000012059 description:"snap-LSalAtl2s85-processed-gene-11.56") HSP 1 Score: 111.694 bits (278), Expect = 7.287e-32 Identity = 72/160 (45.00%), Postives = 96/160 (60.00%), Query Frame = 0 Query: 1 MFSKILCLTALAAVAIADDAPYRPPQPSYKPTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE-NGYVADVKYDGEAQYPKYEPQSYKSEPKGY-SPAPAYKPAP 158 MF ++ LA+V AP+ P+P+P + P P+P + PAPS Y P+Y + Y +QY V D+YS +NF+ E+ DG T G Y+VALPDGR Q V+YT D NG+VADV+Y+G YPKYEP+ +P Y SP+PAYKPAP Sbjct: 1 MFKLLVASVLLASVYGDHSAPH--------------PSPAPYHPPQPAPYHAPAPS-YHSPKYEEPAQPYAFQYGVADDYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEGTPVYPKYEPKPSPYKPAPYHSPSPAYKPAP 145
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001415 (supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12") HSP 1 Score: 108.612 bits (270), Expect = 5.536e-31 Identity = 74/155 (47.74%), Postives = 90/155 (58.06%), Query Frame = 0 Query: 6 LCLTALAAVAIADDAPYRPPQPSYKPTQSYQPAP---SPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE--NGYVADVKYDGEAQYPKYEPQSYKSEPKGYSPAPAYK 155 + L+AL AVA++ P +Y+PAP +PAYKPAP Y PAPS ++P A Y YQYAV DEY+ NF E+RDGY TNG+Y VALPDGR Q V+Y + +GYVADV Y GEA+Y Y P P Y PAP Y Sbjct: 1 MALSALLAVAMS------------APADTYRPAPYHPAPAYKPAP---YHPAPSYKEDP------AIYQYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPYHPA-----PSPYKPAPVYH 129
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005985 (supercontig:LSalAtl2s:LSalAtl2s322:1028992:1029576:1 gene:EMLSAG00000005985 transcript:EMLSAT00000005985 description:"augustus-LSalAtl2s322-processed-gene-9.11") HSP 1 Score: 105.145 bits (261), Expect = 4.764e-29 Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 0 Query: 1 MFSKILCLTALAAVAIADDAPYRPPQPSYKPTQSYQPAPSPA--YKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE-NGYVADVKYDGEAQYPKYEPQ--SYKSEPKGYSPAPAYK 155 M+ I+ L++V + AP + KP PAP+PA + P P+P + PAPS YK +Y + Y +QY V D+Y+ +NF+ E+ DG T+G Y+VALPDGR Q VTYT D NG+VADV+Y+G YPKYEP+ SYK+ +P PAYK Sbjct: 1 MYKYIVAFALLSSVYGSHHAPTPASYDAPKPATYDAPAPTPAPYHPPRPAPYHAPAPS-YKPTKYKEAPQPYAFQYGVADDYTGSNFSAEENADGKITSGSYKVALPDGRIQTVTYTVDAYNGFVADVQYEGTPVYPKYEPKPSSYKA-----APVPAYK 154
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001414 (supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11") HSP 1 Score: 102.834 bits (255), Expect = 1.278e-28 Identity = 78/166 (46.99%), Postives = 94/166 (56.63%), Query Frame = 0 Query: 2 FSKILCLTALAAVAIADDAPYRPPQPSYKPTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE--NGYVADVKYDGEAQYPKYEPQSYKSEPKGYSPAPAYKPAPTPAYQPA 165 + ++AL AVA++ AP P +P+ P+P YKPAP Y PAPS ++P A Y YQYAV DEY+ NF E+RDGY T G+Y VALPDGR Q V+Y + +GYVADV Y GEA KYEP P Y PAP Y AP P Y PA Sbjct: 1 MKSFIAVSALLAVAMS--APADPYRPAPXHPAPAPYHPAPTYKPAP---YHPAPSYKEDP------AVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEA---KYEPX--HPAPSPYKPAPVYHAAPAPVYHPA 150
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000003353 (supercontig:LSalAtl2s:LSalAtl2s1834:174757:175847:1 gene:EMLSAG00000003353 transcript:EMLSAT00000003353 description:"maker-LSalAtl2s1834-augustus-gene-0.3") HSP 1 Score: 100.523 bits (249), Expect = 2.074e-26 Identity = 62/124 (50.00%), Postives = 75/124 (60.48%), Query Frame = 0 Query: 35 YQPAPSPAYKPAPSPSYQPAPSSYKEP------EYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE--NGYVADVKYDGEAQYPKYEPQSYKSEPKGYSP 150 ++PAP Y PAP P+Y AP +K Y D A Y Y YAV D+YS NFA +E+RDGY T GEYRVALPDGRTQ+V Y + +G VADVKY+G A Y Y+P Y P +P Sbjct: 158 HRPAP---YHPAP-PTYHSAPVVHKSSPYHAAESYADTPAVYQYGYAVADDYSGTNFAANENRDGYSTYGEYRVALPDGRTQVVNYNVADAYSGTVADVKYEGTAHYDTYKPAPYHPAPHHLAP 277
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000008499 (supercontig:LSalAtl2s:LSalAtl2s524:110868:111424:-1 gene:EMLSAG00000008499 transcript:EMLSAT00000008499 description:"maker-LSalAtl2s524-augustus-gene-1.42") HSP 1 Score: 95.1301 bits (235), Expect = 1.607e-25 Identity = 64/136 (47.06%), Postives = 75/136 (55.15%), Query Frame = 0 Query: 1 MFSKILCLTALAAVAIADDAPYRPPQPSYKPTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGY-QTNGEYRVALPDGRTQIVTYTAD-ENGYVADVKYDGEAQYP 134 MF K++ L+ L A A AD PY PP P YK YQPA YK+PE P + YQY V D+Y+ F +E +D Y G Y V LPDGR Q VTY AD ENG+VADVKY+GEAQYP Sbjct: 1 MF-KLIVLSVLIAAAFADQ-PYAPPPPVYKQAPVYQPA-----------------KGYKDPELPPQ--PFAYQYGVKDDYTGAAFNKNEEQDSYGNLQGSYSVNLPDGRVQTVTYHADAENGFVADVKYEGEAQYP 115
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000000963 (supercontig:LSalAtl2s:LSalAtl2s1169:21080:22437:-1 gene:EMLSAG00000000963 transcript:EMLSAT00000000963 description:"maker-LSalAtl2s1169-snap-gene-0.17") HSP 1 Score: 98.9821 bits (245), Expect = 3.217e-25 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 0 Query: 57 SYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADENGYVADVKYDGEAQYPK---YEPQS--YKSEPKGYSPAPAYKPAPTPA 161 SY+ P Y YNY Y V D + F+H+E+RD T GEYRV LPDGR QIV+YT D NGY+ADV+Y+G+A YP+ Y+P S YKS P A YKP+PTPA Sbjct: 25 SYETPSYVVKAPVYNYNYGVNDPSYGSIFSHNENRDNLNTAGEYRVNLPDGRVQIVSYTVDGNGYLADVRYEGKAVYPEAPNYKPASAPYKSPPT----AAVYKPSPTPA 130
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000004844 (supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2") HSP 1 Score: 95.1301 bits (235), Expect = 1.114e-24 Identity = 77/185 (41.62%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 5 ILCLTALAAVAIADDAPYRPPQ-----PSY----KPTQSYQPAP------SPAY-------KPAPSPS---------YQPAPSSYKEP---EYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE--NGYVADVKYDGEAQYPKYEPQSYKSEPKGYSPAPA 153 + ++ L AV AD + ++ Q PS+ KP S++ A SP Y KPAP S Y PAP+ +K P E D A Y Y YAV D+Y+ NFA +E+RDGY T GEYRV LPDGRTQIV Y + +GYVADVKY+G+A Y Y+P + Y P PA Sbjct: 55 FITISTLLAVVSADQSSHQTIQHGHSAPSHTSLHKPHGSHRHAVHVPVHQSPPYHSSPILXKPAPYHSVPIVHQPTPYHPAPT-HKSPYHAESYDTPAVYQYGYAVADDYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYVADVKYEGQAHYDTYKP---VHKHASYHPTPA 235
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000012577 (supercontig:LSalAtl2s:LSalAtl2s937:136997:140196:1 gene:EMLSAG00000012577 transcript:EMLSAT00000012577 description:"augustus-LSalAtl2s937-processed-gene-0.11") HSP 1 Score: 92.8189 bits (229), Expect = 1.717e-24 Identity = 53/90 (58.89%), Postives = 61/90 (67.78%), Query Frame = 0 Query: 72 YQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE--NGYVADVKYDGEAQYPKYEPQSYKSEPKGYSPAPAYKPAPT 159 YQYAV DEY+ NF E+RDGY TNG+Y VALPDGR Q V+Y + +GYVADV Y GE P+Y P YKS P Y PAP Y+PAP Sbjct: 81 YQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGE---PQYAP--YKSAP-AYKPAPVYRPAPV 164
BLAST of cuticle protein vs. SwissProt
Match: gi|75026432|sp|Q9V7U0.1|RESIL_DROME (RecName: Full=Pro-resilin; Flags: Precursor) HSP 1 Score: 70.8626 bits (172), Expect = 1.425e-13 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 0 Query: 65 DHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADENGYVADVKYDGEAQ 132 D AKY + Y V D S +F HSE RDG T G+Y V LPDGR QIV Y AD+ GY ++Y+G+A Sbjct: 340 DEPAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEADQQGYRPQIRYEGDAN 407
BLAST of cuticle protein vs. nr
Match: gi|321472827|gb|EFX83796.1| (hypothetical protein DAPPUDRAFT_239749 [Daphnia pulex]) HSP 1 Score: 100.523 bits (249), Expect = 1.524e-23 Identity = 80/170 (47.06%), Postives = 96/170 (56.47%), Query Frame = 0 Query: 4 KILCLTALAAVAIADDAPYRPPQ--PSYKPTQSYQPAPSPAYKPAPSPSYQ-PAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADENGYVADVKYDGEAQYPKYEPQSYKSEPKGYSPAPAYKP-APT---PAYQPAS 166 K LTAL AV AD YR + P Y+ +PAYK Y+ P P Y++ +AV D Y N++ HS+S DG T G YRV LPDGRTQIVTY AD GYVADVKY GEA+YP+Y +YK+ YS APAYKP APT PAY+P + Sbjct: 2 KFFILTALFAVVAADS--YRSAEYAPKYE---------APAYKSTYEAKYETPQP--------------YDFSWAVNDYY--NDYEHSKSSDGKVTTGSYRVVLPDGRTQIVTYKADSYGYVADVKYTGEAKYPEYVANNYKAT--TYS-APAYKPTAPTYSAPAYKPTA 141
BLAST of cuticle protein vs. nr
Match: gi|1325282287|ref|XP_023325837.1| (cuticle protein 21-like [Eurytemora affinis]) HSP 1 Score: 102.449 bits (254), Expect = 1.728e-23 Identity = 67/138 (48.55%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 22 YRPPQPSYKPT---QSYQPAPSPA-YKPAPSPS-YQPAPSS-------------------YKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADE-NGYVADVKYDGEAQYP 134 YRP Y+P Y+PAP+P YK AP+P YQ AP+S Y EP Y D +A YN++YAVLD+ S NNF H ESR+G T G+Y VALPDGR Q VTYT + +GYV V+Y G AQYP Sbjct: 101 YRPAPVVYRPAPAPVVYRPAPAPVVYKSAPAPVVYQAAPASVVYQSAPAPVAYKSAPARAYAEPAYNDADAVYNWEYAVLDDPSYNNFGHKESRNGLNTEGKYYVALPDGRLQTVTYTVNGYDGYVPVVEYSGAAQYP 238
BLAST of cuticle protein vs. nr
Match: gi|321472705|gb|EFX83674.1| (hypothetical protein DAPPUDRAFT_239811 [Daphnia pulex]) HSP 1 Score: 103.99 bits (258), Expect = 2.183e-23 Identity = 67/147 (45.58%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 4 KILCLTALAAVAIADDAPYRP---------PQPSYK-PTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADENGYVADVKYDGEAQYPKYEPQS 140 ++L L A+ AVA A P P P P Y P +Y+ AP+PAY+ +P YQP P Y++++AV D S N+++HSES DG G Y V LPDGRTQIVTY AD GYVADVKY GEA+YP+Y+P + Sbjct: 2 QVLILAAILAVASATSPPVSPAPVYPAPVYPAPVYSVPVTTYE-APAPAYQ---APVYQPQP--------------YSFEWAVKDVESYNDYSHSESSDGKTVIGSYSVVLPDGRTQIVTYRADSYGYVADVKYVGEARYPEYKPNT 130
BLAST of cuticle protein vs. nr
Match: gi|321475516|gb|EFX86479.1| (hypothetical protein DAPPUDRAFT_313061 [Daphnia pulex]) HSP 1 Score: 100.908 bits (250), Expect = 3.110e-23 Identity = 71/153 (46.41%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 5 ILCLTALAAVAIADD------APYRPPQPSYKPTQSYQPAPSPAYKPAPSPSYQPAPSSYKEPEYP------DHEAKYNYQYAVLDEYSNNNFAHSESRD--GYQTNGEYRVALPDGRTQIVTYTADE-NGYVADVKYDGEAQYPKYEPQSYK 142 +C+ +A +A+ AP P PSY P SY P P+Y P PSY PA Y +P YP D YN+++AV D+YSNNN+ H E+ D GY T G Y V LPDGR Q V Y AD+ GYVADVKY+GEAQ+P+ +P YK Sbjct: 4 FICVVLIAFIAVNGQSYPKKPAPAYPSYPSY-PKPSYPSYPKPSYPSYPKPSYSPA--DYAKPAYPTYPQTYDAPMPYNFEWAVKDDYSNNNYNHQETGDDKGYVT-GSYSVDLPDGRKQTVEYKADDYTGYVADVKYEGEAQFPESKPAPYK 152
BLAST of cuticle protein vs. nr
Match: gi|321472707|gb|EFX83676.1| (hypothetical protein DAPPUDRAFT_223263 [Daphnia pulex]) HSP 1 Score: 101.679 bits (252), Expect = 3.333e-23 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0 Query: 56 SSYKEPEYPDHEAKYNYQYAVLDEYSNNNFAHSESRDGYQTNGEYRVALPDGRTQIVTYTADENGYVADVKYDGEAQYPKYEPQS----YKSEPKGYSP--APAYK 155 ++YK PEYP Y++++AV D S N+++HSES DG T+G YRV LPDGRTQIVTY D GYVA+V+Y+GEA+YP+Y+P + YK+ P Y AP YK Sbjct: 23 AAYKTPEYPAQ--PYSFEWAVKDAESYNDYSHSESSDGKVTSGSYRVVLPDGRTQIVTYKDDSYGYVAEVRYEGEARYPEYKPATSYPAYKASPVVYKAPEAPVYK 126 The following BLAST results are available for this feature:
BLAST of cuticle protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cuticle protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of cuticle protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold324_size206069:98629..99775+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold324_size206069-snap-gene-1.25 ID=maker-scaffold324_size206069-snap-gene-1.25|Name=cuticle protein|organism=Tigriopus kingsejongensis|type=gene|length=1147bp|location=Sequence derived from alignment at scaffold324_size206069:98629..99775+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein' has the following synonyms
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