activating signal cointegrator 1 complex subunit 3, maker-scaffold337_size202799-snap-gene-1.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of activating signal cointegrator 1 complex subunit 3 vs. L. salmonis genes
Match: EMLSAG00000009349 (supercontig:LSalAtl2s:LSalAtl2s598:348409:357028:-1 gene:EMLSAG00000009349 transcript:EMLSAT00000009349 description:"maker-LSalAtl2s598-snap-gene-3.8") HSP 1 Score: 279.256 bits (713), Expect = 5.264e-82 Identity = 155/400 (38.75%), Postives = 233/400 (58.25%), Query Frame = 0 Query: 165 FGQTIDFRSPFDVPEPQASDPELVHLCQVAD----GAFNLRRQINFGLPSPAGPTGPAATAGAGLTYDMAWLEAKLQSAFGLQ-HPSGMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPARPAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 FGQ + F SP E D + ++L + D FNL + ++F T + + WL+ K+ +G + P GMS EF ++ ++S +SSDELQ ELFELIGFD +L+ ++ +RDE+ +S T+ + E+ A T LS ++ T RP YGCQV+V S+EE++L+KQ+ KE+++I K M ++ DE F+ + + + LA+ ++P+ S+ + R YPFVFD + K +GF+ G K+ALP GFERKD KK+EE +PA+ APVD+G++L+ I++LD+IGQ F GI+ LNRIQS+VFD+AY++++N+LVCAPTGAGKTNVA+LC+TQ I+ I NG+ Sbjct: 149 FGQQLKFSSPLKHFE----DTDNIYLDYLTDFSQLNEFNLDKSLSFNYDHVKSITNGKENNTS--FKNAKWLQEKVIQFYGKESEPLGMSIQEFCQTLLEVITSKKSSDELQNELFELIGFDRIDLISLILEYRDEVTKSERDTKRFLIRELAXATT----LSDAM-----------------TEHDKRPMYGCQVLVHSQEEKRLRKQMWKEEKKIGKAMKQMADDE-------YFEIEESKAASRAVLASTIMKPMPVLSTNNDFRKSASPQPSYPFVFDSKAVVKQTSGFIHGSKIALPVGFERKDHKKFEEVYIPASEKAPVDVGKNLIPIETLDDIGQTVFNGIESLNRIQSIVFDTAYNSSENMLVCAPTGAGKTNVALLCITQTIKNFIDNGI 514
BLAST of activating signal cointegrator 1 complex subunit 3 vs. L. salmonis genes
Match: EMLSAG00000002206 (supercontig:LSalAtl2s:LSalAtl2s1412:46883:55835:1 gene:EMLSAG00000002206 transcript:EMLSAT00000002206 description:"maker-LSalAtl2s1412-augustus-gene-0.10") HSP 1 Score: 84.3445 bits (207), Expect = 3.974e-17 Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 452 FVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 F+ + LP G RK +K YEE +PA D G L I++L Q F G + LNRIQS + D ++++N+L+CAPTGAGKTNVAML + + I + + Sbjct: 393 FMANKRCQLPEGSYRKQKKGYEEVHVPALKPKEYDQGEILTPIETLPTYAQGAFPGFKTLNRIQSKLADICLNSDENVLLCAPTGAGKTNVAMLTILREIGKRV 496
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|347595711|sp|P53327.2|SLH1_YEAST (RecName: Full=Antiviral helicase SLH1; AltName: Full=SKI2-like helicase 1) HSP 1 Score: 88.9669 bits (219), Expect = 4.686e-17 Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = 0 Query: 417 VIKESSEGERRA--PMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVD--IGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQ-NIVNG 558 V+K + + + R P + +YP VF A G K LP G R +EE +PAA A + L+ I LD + F + LN+IQS+V+ AY TN+N+L+CAPTGAGKT++A+L + I+Q ++VNG Sbjct: 191 VLKSAEDAKNRKLNPATKIIKYPHVFRKYEAGSTTAMAFAGQKFTLPVGTTRMSYNTHEEIIIPAADQASNKNYLYTKLLKISDLDHFCKTVFP-YETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFSVVNG 336
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|56405304|sp|O75643.2|U520_HUMAN (RecName: Full=U5 small nuclear ribonucleoprotein 200 kDa helicase; AltName: Full=Activating signal cointegrator 1 complex subunit 3-like 1; AltName: Full=BRR2 homolog; AltName: Full=U5 snRNP-specific 200 kDa protein; Short=U5-200KD) HSP 1 Score: 87.8113 bits (216), Expect = 8.985e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 452 FVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 F+ + LP G R+ K YEE +PA P L+ ++ L + Q F+G + LNRIQS ++ +A T++NLL+CAPTGAGKTNVA++C+ + I ++I Sbjct: 422 FMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHI 525
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|476007227|sp|F1LNJ2.1|U520_RAT (RecName: Full=U5 small nuclear ribonucleoprotein 200 kDa helicase; AltName: Full=BRR2 homolog; AltName: Full=U5 snRNP-specific 200 kDa protein; Short=U5-200KD) HSP 1 Score: 87.8113 bits (216), Expect = 9.224e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 452 FVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 F+ + LP G R+ K YEE +PA P L+ ++ L + Q F+G + LNRIQS ++ +A T++NLL+CAPTGAGKTNVA++C+ + I ++I Sbjct: 422 FMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHI 525
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|81911255|sp|Q6P4T2.1|U520_MOUSE (RecName: Full=U5 small nuclear ribonucleoprotein 200 kDa helicase; AltName: Full=BRR2 homolog; AltName: Full=U5 snRNP-specific 200 kDa protein; Short=U5-200KD) HSP 1 Score: 87.8113 bits (216), Expect = 9.384e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 452 FVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 F+ + LP G R+ K YEE +PA P L+ ++ L + Q F+G + LNRIQS ++ +A T++NLL+CAPTGAGKTNVA++C+ + I ++I Sbjct: 422 FMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHI 525
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|75337873|sp|Q9SYP1.1|DEXHC_ARATH (RecName: Full=DExH-box ATP-dependent RNA helicase DExH12; AltName: Full=BRR2 homolog A; Short=AtBRR2A; AltName: Full=Pre-mRNA-splicing helicase BRR2A; AltName: Full=Protein EMBRYO DEFECTIVE 1507) HSP 1 Score: 86.2705 bits (212), Expect = 3.093e-16 Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0 Query: 457 KLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQN 554 K LP G R K Y+E +P + VD LV I + + Q FKG+Q LNR+QS V+D+A +N+L+CAPTGAGKTNVAML + Q + N Sbjct: 452 KCDLPPGSYRSHGKGYDEVHVPWV-SKKVDRNEKLVKITEMPDWAQPAFKGMQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQQLEMN 548
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|12230659|sp|Q9U2G0.1|U520_CAEEL (RecName: Full=Putative U5 small nuclear ribonucleoprotein 200 kDa helicase) HSP 1 Score: 85.5001 bits (210), Expect = 5.615e-16 Identity = 48/106 (45.28%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 452 FVQGVKLA------LPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAI 551 F QG L LP G R+ +K YEE +PA P G LV++ L + Q F G + LNRIQS + DSA + ++LL+CAPTGAGKTNVA+L + Q I Sbjct: 410 FSQGSHLMSNKRCELPDGSYRRQKKSYEEIHVPALKPRPFAEGEKLVSVSELPKWAQPAFDGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEI 515
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|74698435|sp|Q9UT24.1|BRR2_SCHPO (RecName: Full=Pre-mRNA-splicing factor brr2; AltName: Full=Pre-mRNA-splicing factor spp41; AltName: Full=Pre-mRNA-splicing helicase BRR2) HSP 1 Score: 85.1149 bits (209), Expect = 6.034e-16 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 0 Query: 452 FVQGVKLA------LPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 F +G +L LP G R+ K YEE +PA A + LV I L E F Q LNRIQS ++ A+ T++N+L+CAPTGAGKTNVAMLC+ +++++ Sbjct: 455 FTEGSRLMSNKAVKLPEGSFRRTGKGYEEIHVPAPNKAVLGADERLVKIKELPEWSHQAFLNTQSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILNELQKHL 564
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|74997404|sp|Q55CI8.1|HELCL_DICDI (RecName: Full=Activating signal cointegrator 1 complex subunit 3-like) HSP 1 Score: 82.0333 bits (201), Expect = 6.679e-15 Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 0 Query: 457 KLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFK--GIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQN 554 + P G +R+ K +EE +PA P + L++I+ L E ++ F+ G++ LNR+QS +FD A+ T+ NLL+ APT +GKTNVAML + I +N Sbjct: 496 EFKFPKGSKREQYKGFEEIHVPARANPPFNPNERLISIEELPEWSRLPFEESGVKSLNRVQSKLFDCAFKTDNNLLLSAPTSSGKTNVAMLTILHEIGKN 595
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|75318295|sp|O48534.1|DEXHD_ARATH (RecName: Full=DExH-box ATP-dependent RNA helicase DExH13; AltName: Full=BRR2 homolog B; Short=AtBRR2B; AltName: Full=Pre-mRNA-splicing helicase BRR2B) HSP 1 Score: 72.0182 bits (175), Expect = 7.197e-12 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 0 Query: 439 VFDGLSQTKAAAGFV-QGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNI 555 V D S GF + K LP R K+++E +P + D LV I L E Q F+G+Q LNR+QS V+ +A N+L+CAPTGAGKTNVA+L + + N+ Sbjct: 434 VMDLESLAFNQGGFTRENNKCELPDRSFRIRGKEFDEVHVPWV-SKKFDSNEKLVKISDLPEWAQPAFRGMQQLNRVQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILHQLGLNM 550
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Match: gi|731380|sp|P32639.2|BRR2_YEAST (RecName: Full=Pre-mRNA-splicing helicase BRR2; AltName: Full=Protein Snu246) HSP 1 Score: 70.4774 bits (171), Expect = 2.799e-11 Identity = 48/154 (31.17%), Postives = 81/154 (52.60%), Query Frame = 0 Query: 403 TKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQ--HLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQN 554 +KR++ + Q Q SSE +R P P + + ++ + K++LP G ++ + +Y+E +PA +D +L I SL + Q F + LN IQS VF +A+ + N+L+CAPTG+GKTN+A+L V +A+ + Sbjct: 397 SKRELDSGDDQPQ-----SSEA-KRTKFSNPAIPPVIDLEKIKFDESSKLMTVTKVSLPEGSFKRVKPQYDEIHIPAPSKPVIDY--ELKEITSLPDWCQEAFPSSETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLKALSHH 542
BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Match: gi|443683934|gb|ELT88015.1| (hypothetical protein CAPTEDRAFT_159536 [Capitella teleta]) HSP 1 Score: 237.654 bits (605), Expect = 8.903e-64 Identity = 177/567 (31.22%), Postives = 286/567 (50.44%), Query Frame = 0 Query: 10 PRLSGFLRRHSPLSGPNGAAPSLQPAGLRAERIAQRRQADRRQRDGFVAWSEV-----RQAWTDPTVAAGLR---RAIGARLGSEVASALIDDATVEVLGLVWATETFSMQFHGALKAHLGPL-TSGESQALHVLFRQALVEPALTRIQARWAARSAPSPGAPPFGQTIDFR-------SPFDVPEPQASDPELVHLCQVADGAFNLRRQINFGLPSPAGPTGPAATAGAGLTYDMAWLEAKLQSAFGLQHPS-GMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPARPAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 PRL+G LR + +S + + +P R +++QA R+ +G ++W ++ +Q T+ V LR ++ +G E +S +I+ + + + +E S L+ GP + ++A + R A P + + FG+ + F ++ + ++SD E A F+++ G + AG + + G WL K++ AFG GMS + I + LSS++S ELQ E FEL+GFD FEL+Q ++ +R +++ A D+ ++ + K GAH R + +RP G QVVVQSE+E+Q +K R+E+++ M K +E+ + FDP + +R+ AL A P+ S+G R+ P +YP+VFD ++ K ++ F+ G K+ LP GF+R++ K YEE +P + PV IGR L+ I LDEIGQ+ F G++ LNRIQSVVF++AY TN+NLL+CAPTGAGKTN+AML V ++Q++ GV Sbjct: 4 PRLTGALRAFADVSASD--SEHFEPDASAKLRKKRQQQAMRQSEEG-LSWQQLVKVIKKQRGTEEKVTRSLRDLTQSAHDIVGEEASSDVIESGSAFLFEVFCGSEHVSHHHTTKLRGMFGPFPANAATKACRAVNRIAEWIPDDVLHELLTQNSKTSVDDSTEFGKNLKFHPWKPQSSEVYEWMDEESSDEE-------AGSLFDMKYVSQGGASASAGASKESEKVGG------HWLRKKVELAFGGPETGIGMSITDVCSHIFDVLSSSKSDAELQNEFFELLGFDRFELIQEMLENRKKLI---ASAFDSAADYMLNQPSDK-------------------GAHIR--DHSRPVIGTQVVVQSEDEKQFRKLARREEKK----MGKKRDEEESQLKTLGFDPQRMKAQREAALYAAATAPMF---SQGMGRST-AAPPKYPYVFDAYAEAKQSSSFIGGSKMNLPVGFDRENNKDYEEVNIPPSDPPPVQIGRRLIPISELDEIGQVAFSGMKSLNRIQSVVFETAYKTNENLLICAPTGAGKTNIAMLTVVHELKQHLSQGV 522
BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Match: gi|1209694331|gb|OWR47441.1| (Activating signal cointegrator 1 complex subunit 3 [Danaus plexippus plexippus]) HSP 1 Score: 233.032 bits (593), Expect = 9.114e-64 Identity = 171/560 (30.54%), Postives = 262/560 (46.79%), Query Frame = 0 Query: 10 PRLSGFLRRHSPLSGPNGAAPSLQPAGLRAERIAQRRQADRRQRDGFVAWSEVRQAWTDPTVAAGLRRAIGARLGSEVASALIDDATVEVLGLVWATETFSMQFHGALKAHLGPLTSGESQALHVLFRQALVEPALTRIQARWAARSAPSPGAPPFGQTIDFRSPFDVPEPQASDPELVHLCQVADGAFNLRRQINFGLPSPAGPTGPAATAGAGLT-YDMAWLEAKLQSAFGLQHPSGMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPAR--PAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQP-------EQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 PR++ LR H+ L P P + IAQ+R ++ +E Q + L+ A G +V +I+DA V L + + ++ +L+ G ++S + + + E + Q + + +G++I +P A P L L + N + + P TA + + WLE K++ + ++ +G+S+ + I+ L+S+R++DELQ +LFEL+GFD FE ++ ++ HR E+ S PP P A ++ P P Y CQV VQSE+E+ L K VRKE+++ + SK DE+E H + R KR L +PV+ S+ P++Q QYP V+D K +AGFV G+KL LP RKD K+YEE +P AP+ +G V I LDEIGQ+ F+ I+ LNRIQSVVF +AY+TN+NLL+CAPTGAGKTN+A+L V ++Q+I N V Sbjct: 5 PRITRALRAHTQLDKPRCLKPGKDNKIIFKTSIAQKRHRTYSDIYEYIKKNEPNQIIN---LLEKLKEACKMLTG-DVTDDIINDAVVLTLKMFLDQDIVMLKHLSSLRQMFGSVSSANANKICEIVTNISNEVSDDTKQYIQTEVNDENQNVKLWGESIQCHY---IPYKPAKKP-LAKLTKKPAMDSNFVTDFSMKYTNKVQNVQPQVTANKTESKFGKVWLENKVRELY--ENSNGISSADILQSIITFLNSSRTNDELQNDLFELLGFDKFEFIEGILQHRQEITESLKVP--------------------------PPQ---PTIAEIASLLPENKMPQYLCQVSVQSEQEKMLAKLVRKEEKKAK---SKRCDDEEE----HEINIAQLRAKRIAELT----KPVVPFSTSKSNLDPILQKISYSQTKVQYPNVYDSSINAKNSAGFVSGLKLILPENAIRKDNKEYEEVVIPKNEQAPLSVGNKRVPISDLDEIGQMAFENIKELNRIQSVVFQTAYNTNENLLICAPTGAGKTNIALLTVVHQLKQHIENDV 514
BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Match: gi|998508612|ref|XP_015514689.1| (PREDICTED: activating signal cointegrator 1 complex subunit 3 [Neodiprion lecontei]) HSP 1 Score: 236.113 bits (601), Expect = 2.828e-63 Identity = 132/318 (41.51%), Postives = 187/318 (58.81%), Query Frame = 0 Query: 243 QHPSGMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPA-RPAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 ++ + M +F +IV+ L D LQTELF+L+G+++ E ++ ++ H+ KSI++ +F + + P RP GCQV+VQSE+E+QL KQ RKE++++ KI +K+E ED+ FDPV+ R KRQ AL +Q I +++ ++ E+YPFVFD +AAAGFV G K+ LP ERKD + EE +P AA +D+G + V I SLDE+GQ+ F GI+ LNRIQS+VFD+AYHTN+NLL+CAPTGAGKTNVAML V I+ +I GV Sbjct: 223 KYSAEMIYEDFGHMIVDKLKC--GGDNLQTELFDLLGYENIEFIEYVLEHQ------------------------KSIVA-----------LFTIQKTQKNNTPILRPQVGCQVIVQSEKEKQLMKQYRKEEKKLNKITNKLENGEDD--DEETFDPVELRLKRQEALMRQAMQAPILNTTQRNIFPSGIRAERYPFVFDSKLTARAAAGFVSGQKVMLPENVERKDSQLCEEVHIPVPPAAVLDVGNNPVIISSLDEVGQMAFHGIKSLNRIQSIVFDAAYHTNENLLICAPTGAGKTNVAMLTVIHQIKLHIAQGV 501
BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Match: gi|1205896096|gb|OWF45882.1| (Activating signal cointegrator 1 complex subunit 3 [Mizuhopecten yessoensis]) HSP 1 Score: 231.106 bits (588), Expect = 1.285e-61 Identity = 171/571 (29.95%), Postives = 280/571 (49.04%), Query Frame = 0 Query: 7 TDPPRLSGFLRRHSPLSGPNGAAPSLQPAGLRAER-IAQRRQAD-----------RRQRDGFVAWSEVRQAWTDPTVAAGLRRAIGARLGSEVASALIDDATVEVLGL--VWATETFSMQFHGALKAHLGPLTSGESQALHVLFRQALV---EPALTRIQARWAARSAPSPGAPPFGQTIDFRSPFDVPEPQASDPELVHLCQVADGAFNLRRQINFGLPSPAGPTGPAATAGAGLTYDMAWLEAKLQSAFGLQHPS-GMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPARPAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 ++ PRL+G +R S LS A +Q + L+ +R + +Q++ R++ D + S+++ A D + A R I +G E + ++ A + GL +T S + L+ GP + + + R+ + E A + + + FGQ I F AS L +D A + + + PA A+ YD WL+ +++ + + GM+T + + I + L S+++ ELQ +LFEL+GFD FEL++ L+ +R +++S + + R P GA + +PAYGCQV+VQ+E+ER+L KQ+R++++R K E + + ++ F+P + R++R+ AL +A + P+ + S P + E+YP V D + + + ++ FV GVKLALP F R K YEE +P A + +G V + LDEI Q+ FKG LNRIQS+VF++AY TN+NLL+CAPTGAGKTN+AML V ++Q+I GV Sbjct: 2 SNLPRLTGAIRAFSGLSASPEHATGIQQSDLQQKRHLVAEKQSNSQSWNTLCTQIRKEVDA--SGSDIKAALKDLSYCA---RNI---VGQEASLETVEGAAAFLFGLFKTATMDTVSSKEANKLRNIFGPFPASAASKACAIVRKIVSWMPEDAALLMDNQMREEAEGEASVKEFGQNIKFSCLM------ASAEYLSSSESDSDEANHRDLDLKYSDNRPAQKLKGNASQTDSSQYDAGWLQREVKKYYPTGDSALGMTTEDISSTIFDVLISSKTDQELQNDLFELLGFDRFELIENLLQNRKVVIQSSLTSDPSTR---------------------------PNGARKKGDGGNKPAYGCQVIVQTEQERKLMKQLRRDEKRFDKKGGWQEEEGEGIS----FNPQELRSQREAALKSAVMAPLFSDRS----FRPQAR-ERYPNVHDSMEEARQSSAFVGGVKLALPDSFHRSTHKLYEEVHIPHTEATSLTVGNTRVPVADLDEIAQMAFKGTVTLNRIQSMVFEAAYKTNENLLICAPTGAGKTNIAMLTVLHELKQHISQGV 522
BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Match: gi|1207946084|ref|XP_021362889.1| (activating signal cointegrator 1 complex subunit 3-like [Mizuhopecten yessoensis]) HSP 1 Score: 231.106 bits (588), Expect = 1.322e-61 Identity = 177/579 (30.57%), Postives = 279/579 (48.19%), Query Frame = 0 Query: 7 TDPPRLSGFLRRHSPLSGPNGAAPSLQPAGLRAERIAQRRQADRRQRDGFVAWSEVR-QAWTDPTVAAGLRRAIGARLGSEVASALIDDATV--EVLGLVWATETF---SMQFHGALK-AHLGPLTSGESQALHVLF-----RQALVEPALTRIQARWAARSAP-------------SPGAPPFGQTIDFRSPFDVPEPQASDPELVHLCQVADGAFNLRRQINFGLPSPAGPTGPAATAGAGLTYDMAWLEAKLQSAFGLQHPS-GMSTPEFALVIVNSLSSTRSSDELQTELFELIGFDHFELLQTLITHRDEMVRSRAQTRDAVRSEIIWAATRKSILSASIRGGHPPHCVFPLGAHGRTVEPARPAYGCQVVVQSEEERQLKKQVRKEDRRIQKIMSKIEVDEDEVTQAHVFDPVDRRTKRQVALANAQLQPVIKESSEGERRAPMVQPEQYPFVFDGLSQTKAAAGFVQGVKLALPSGFERKDEKKYEEYRLPAAGAAPVDIGRDLVAIDSLDEIGQITFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKTNVAMLCVTQAIRQNIVNGV 559 ++ PRL+G +R S LS A +Q Q+D +Q+ VA + Q+W T+ +R+ + A GS++ +AL D + ++G + ET + G K A + ++S E+ L +F A A+ R W A FGQ I F AS L +D A + + + PA A+ YD WL+ +++ + + GM+T + + I + L S+++ ELQ +LFEL+GFD FEL++ L+ +R +++S + + R P GA + +PAYGCQV+VQ+E+ER+L KQ+R++++R K E + + ++ F+P + R++R+ AL +A + P+ + S P + E+YP V D + + + ++ FV GVKLALP F R K YEE +P A + +G V + LDEI Q+ FKG LNRIQS+VF++AY TN+NLL+CAPTGAGKTN+AML V ++Q+I GV Sbjct: 2 SNLPRLTGAIRAFSGLSASPEHATGIQ-------------QSDLQQKRHLVAEKQSNSQSWN--TLCTQIRKEVDAS-GSDIKAALKDLSYCARNIVGQEASLETVEGAAAFLFGLFKTATMDTVSSKEANKLRNIFGPFPASAASKACAIVRKIVSWMPEDAALLMDNQMREEAEGEASVKEFGQNIKFSCLM------ASAEYLSSSESDSDEANHRDLDLKYSDNRPAQKLKGNASQTDSSQYDAGWLQREVKKYYPTGDSALGMTTEDISSTIFDVLISSKTDQELQNDLFELLGFDRFELIENLLQNRKVVIQSSLTSDPSTR---------------------------PNGARKKGDGGNKPAYGCQVIVQTEQERKLMKQLRRDEKRFDKKGGWQEEEGEGIS----FNPQELRSQREAALKSAVMAPLFSDRS----FRPQAR-ERYPNVHDSMEEARQSSAFVGGVKLALPDSFHRSTHKLYEEVHIPHTEATSLTVGNTRVPVADLDEIAQMAFKGTVTLNRIQSMVFEAAYKTNENLLICAPTGAGKTNIAMLTVLHELKQHISQGV 522 The following BLAST results are available for this feature:
BLAST of activating signal cointegrator 1 complex subunit 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of activating signal cointegrator 1 complex subunit 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 20
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BLAST of activating signal cointegrator 1 complex subunit 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold337_size202799:179805..181897+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold337_size202799-snap-gene-1.21 ID=maker-scaffold337_size202799-snap-gene-1.21|Name=activating signal cointegrator 1 complex subunit 3|organism=Tigriopus kingsejongensis|type=gene|length=2093bp|location=Sequence derived from alignment at scaffold337_size202799:179805..181897+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'activating signal cointegrator 1 complex subunit 3' has the following synonyms
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