upstream activation factor subunit uaf30, maker-scaffold338_size202645-snap-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Match: EMLSAG00000009844 (supercontig:LSalAtl2s:LSalAtl2s63:310844:311707:-1 gene:EMLSAG00000009844 transcript:EMLSAT00000009844 description:"maker-LSalAtl2s63-augustus-gene-3.13") HSP 1 Score: 145.591 bits (366), Expect = 6.508e-43 Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 0 Query: 166 EDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 ED K +K +GGGG GF KPL LS DLA IVG++ APRHEVVKQVWAYIK + LQDPKNKQFA CD+KL KVIG+ KF+CFGMAK+LK HMS Sbjct: 148 EDFKPTKAKRKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVIGETKFKCFGMAKYLKSHMS 243
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Match: EMLSAG00000001079 (supercontig:LSalAtl2s:LSalAtl2s117:677548:677954:-1 gene:EMLSAG00000001079 transcript:EMLSAT00000001079 description:"maker-LSalAtl2s117-augustus-gene-7.31") HSP 1 Score: 95.9005 bits (237), Expect = 9.205e-26 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 0 Query: 183 GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 G G K +KLS +LA +VG++ A R E +K +WAY+K HNLQDP+NKQ+ D K+ K+ G+ + R FGMAKFLK+H+S Sbjct: 4 GSGLTKTMKLSNELAXVVGKKEASRAECIKLLWAYLKKHNLQDPENKQYFTPDKKMAKIFGEDRIRAFGMAKFLKEHLS 82
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Match: EMLSAG00000002923 (supercontig:LSalAtl2s:LSalAtl2s1687:28882:29139:-1 gene:EMLSAG00000002923 transcript:EMLSAT00000002923 description:"augustus_masked-LSalAtl2s1687-processed-gene-0.0") HSP 1 Score: 93.5893 bits (231), Expect = 7.323e-25 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 0 Query: 183 GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 G G K +KLS +LA +VG++ A R E +K +WAY+K HNLQDP+NKQ+ D K+ K+ G + R FGMAKFLK+H+S Sbjct: 4 GSGLTKTMKLSNELADVVGKKEASRAECIKLLWAYLKKHNLQDPENKQYFTPDKKMAKIFGADRIRAFGMAKFLKEHIS 82
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Match: EMLSAG00000008620 (supercontig:LSalAtl2s:LSalAtl2s530:741339:741623:1 gene:EMLSAG00000008620 transcript:EMLSAT00000008620 description:"augustus_masked-LSalAtl2s530-processed-gene-7.4") HSP 1 Score: 56.9954 bits (136), Expect = 4.696e-11 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0 Query: 207 RHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 R + + +W Y+K H+LQ+ NKQF D K+ K++G+ + R FG+ K LKDH+ Sbjct: 39 RAKCIYLLWVYLKNHHLQELTNKQFFTIDKKMAKILGKDRIRSFGINKVLKDHL 92
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Match: EMLSAG00000005264 (supercontig:LSalAtl2s:LSalAtl2s2815:1325:3174:1 gene:EMLSAG00000005264 transcript:EMLSAT00000005264 description:"maker-LSalAtl2s2815-augustus-gene-0.2") HSP 1 Score: 55.0694 bits (131), Expect = 5.111e-9 Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 0 Query: 191 KLSEDLAAIVG-QESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMSPLD 264 +LS L+++ G R +VV++VW YIK NLQD K KCDDKL ++ + +F + + L HM L+ Sbjct: 323 RLSPTLSSLCGGVRKLSRRDVVRKVWVYIKKRNLQDSNRKHIVKCDDKLRELSNEDEFDYRRLFRHLDSHMFGLE 397
BLAST of upstream activation factor subunit uaf30 vs. SwissProt
Match: gi|74626867|sp|O74503.1|UAF30_SCHPO (RecName: Full=Upstream activation factor subunit spp27; AltName: Full=Upstream activation factor 27 KDa subunit; Short=p27; AltName: Full=Upstream activation factor 30 KDa subunit; Short=p30; AltName: Full=Upstream activation factor subunit uaf30) HSP 1 Score: 78.5666 bits (192), Expect = 3.981e-16 Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 0 Query: 127 AAAAKAAAAKTTPA-KTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFI-KPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 A + K + K PA KT G +A ++E +P A+ + E GE K+KR + KP+KLS LA +G E R + VK++W YIK H+LQDP +K+ CDDKL V F M K+L + M+ Sbjct: 57 APSEKESLEKQAPARKTKGKRATENGTEEGKKP-AKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYLTNLMT 192
BLAST of upstream activation factor subunit uaf30 vs. SwissProt
Match: gi|74645010|sp|Q08747.1|UAF30_YEAST (RecName: Full=Upstream activation factor subunit UAF30; AltName: Full=Upstream activation factor 30 KDa subunit; Short=p30) HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-14 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0 Query: 160 AEGEKAEDE--KGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 + GE+ D KG KKK + + LS+ LA+++G+ R EVV+++WAYIK HNLQ+P NK+ CD+KL ++G K F M K L HM+ Sbjct: 92 SSGEEKNDSETKGTHVEKKKGTVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASHMT 194
BLAST of upstream activation factor subunit uaf30 vs. SwissProt
Match: gi|2497196|sp|Q05024.1|TRI1_YEAST (RecName: Full=Protein TRI1) HSP 1 Score: 65.4698 bits (158), Expect = 1.706e-11 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0 Query: 187 IKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 ++ + LS L +G E PR +VVK +W YIK H+LQ+PK+++ CD+K+ + G KK F M K L H+ Sbjct: 121 VRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHL 193
BLAST of upstream activation factor subunit uaf30 vs. SwissProt
Match: gi|73622093|sp|Q9FMT4.1|SNF12_ARATH (RecName: Full=SWI/SNF complex component SNF12 homolog) HSP 1 Score: 55.4546 bits (132), Expect = 1.156e-7 Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 0 Query: 190 LKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMSP 262 KLS L ++G E R ++ +W Y+K LQ+P + F CD L KV G++K + +++ + H+SP Sbjct: 319 FKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSP 391
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|225709960|gb|ACO10826.1| (Upstream activation factor subunit UAF30 [Caligus rogercresseyi]) HSP 1 Score: 175.252 bits (443), Expect = 1.428e-50 Identity = 120/258 (46.51%), Postives = 155/258 (60.08%), Query Frame = 0 Query: 4 IAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 ++ SELK +V AILK+ADLE+TS KKVR LE DL++RKEE+N IIQEV MD +EE +++ + + D E P K A +K + + + A+K+ KA AK+ K + ++ KPT + +K +GGGGG GF KPL LSEDLAAIVG++ APRHEVVKQVWAYIK +NLQDP NKQFA CD+KL KVIG+KKF+CFGMAK+ K+HMS Sbjct: 3 VSRSELKVRVTAILKDADLESTSAKKVRKSLEDAFDTDLSSRKEEVNAIIQEV---MDENEEEDKSEDEGGKQSSDYEPEESPAPPPKKKKAPAKKRKGNDSDSDDDNESEEEWSASKSKAKKATPAKSRKRKDSDDNSSDEDFKPTKA---------------------KRKSKGGGGGNGFTKPLNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVIGEKKFKCFGMAKYFKNHMS 236
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|936705708|ref|XP_014230817.1| (upstream activation factor subunit spp27 [Trichogramma pretiosum]) HSP 1 Score: 152.14 bits (383), Expect = 2.411e-41 Identity = 105/278 (37.77%), Postives = 156/278 (56.12%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDE------------------DDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 M++I+ EL++++ AILK+ADL +TS KKVR+Q+E L DLT RK+EI++++ + + E ++ DG + ++EE +++EE +P + K G ASK K + ++A+ + A + +P K + A K K +DSDED + +K P K+GG G G+ + LS +LA++VG + RHEVVK+VWA IK NL DPKNKQFA CDD L+KVIG K+FR FGM K+LK+H Sbjct: 1 MADISKDELRKEITAILKDADLTSTSAKKVRLQIEKKLDVDLTERKKEIDELVMDCLQE-----KQQDGKKKKAASEESEDGEEEEEEEEEEEEEEEEEEEKKPAKRGPKKGTASKRKK--GSSDDEESASDEDASDEEYSPKKVKRSAKKGAGKAGKKGKKGKNSDSDSDED--------WGKSKKATPA---KKGGAKGSGYTRAYTLSAELASLVGSKQMARHEVVKKVWAIIKERNLYDPKNKQFAICDDDLMKVIGVKRFRTFGMMKYLKNHF 260
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|1314955066|ref|XP_023178763.1| (upstream activation factor subunit spp27 [Drosophila hydei]) HSP 1 Score: 147.132 bits (370), Expect = 1.529e-39 Identity = 102/266 (38.35%), Postives = 147/266 (55.26%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAAD--DDEEPAEP-EVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGG---GGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E L L +RK+E +KI+ EV+NE ED++ D D+ + A+ DD EP+E EV + K AP + QP K K +A K + A +D+ D + E + + K K G G G GF + LS +L+A++G +S PRHEVVK+VWA IK +L DPKNKQFA CDD+L+KV+ K+FR FGM K LK H Sbjct: 1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVEGKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKH-------------------KVSAKKKRKSLNADDSGTESDAGSDSDYEV----VKKPAPKKKAAKTAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|195126905|ref|XP_002007909.1| (uncharacterized protein Dmoj_GI13202 [Drosophila mojavensis] >gi|1060224376|ref|XP_017861502.1| PREDICTED: upstream activation factor subunit spp27 [Drosophila arizonae] >gi|193919518|gb|EDW18385.1| uncharacterized protein Dmoj_GI13202 [Drosophila mojavensis]) HSP 1 Score: 146.747 bits (369), Expect = 2.042e-39 Identity = 101/263 (38.40%), Postives = 147/263 (55.89%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAAD--DDEEPAEP-EVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L L +RK+E +KI+ EV+NE ED++ D D+ + A+ DD EP+E EV + K AP + QP K K +A K + A +D+ D + E +K +K K G GF + LS +L+A++G +S PRHEVVK+VWA IK +L DPKNKQFA CDD+L+KV+ K+FR FGM K LK H Sbjct: 1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKH-------------------KVSAKKKRKSLNADDSGTESDAGSDSDYEV-VKKPAPKKKAAKSAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|225713048|gb|ACO12370.1| (YMR233W [Lepeophtheirus salmonis]) HSP 1 Score: 145.591 bits (366), Expect = 6.095e-39 Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 0 Query: 166 EDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 261 ED K +K +GGGG GF KPL LS DLA IVG++ APRHEVVKQVWAYIK + LQDPKNKQFA CD+KL KVIG+ KF+CFGMAK+LK HMS Sbjct: 148 EDFKPTKAKRKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVIGETKFKCFGMAKYLKSHMS 243
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|1062666545|ref|XP_017956466.1| (PREDICTED: upstream activation factor subunit spp27 [Drosophila navojoa]) HSP 1 Score: 145.591 bits (366), Expect = 6.230e-39 Identity = 100/263 (38.02%), Postives = 146/263 (55.51%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAAD--DDEEPAEP-EVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L L +RK+E +KI+ EV+NE ED++ D D+ + A+ DD EP+E EV + K AP + QP K K + K + A +D+ D + E +K +K K G GF + LS +L+A++G +S PRHEVVK+VWA IK +L DPKNKQFA CDD+L+KV+ K+FR FGM K LK H Sbjct: 1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKH-------------------KVSTKKKRKSLNADDSGTESDAGSDSDYEV-VKKPAPKKKAAKSAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|170058412|ref|XP_001864911.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167877491|gb|EDS40874.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 145.206 bits (365), Expect = 1.009e-38 Identity = 101/260 (38.85%), Postives = 147/260 (56.54%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 M E EL++++ ILK+A+LE T+ KKVR+QLE +LK DL+ RK+E++ ++ E +N D EE + +E+ E+ ++ +E E KK K GA +K AP +K + + ++ K +AK P + + +DSDED + + A+ + G+ +P LS +LAAI G E+ PRHEVVK+VWA IK NL DPKNKQ+A CD +L KVIG K+FR FGM K+LK H Sbjct: 1 MPEPTKDELRKEIATILKDANLEETAAKKVRLQLEDNLKCDLSQRKKEVDDLVMEYVNAQDESGEEEEQEEEAEDKSESEESEDEAPKKKGKRGAPAKRGAPASKKKKGSDSEEESEEEASDDDYKPTKGAKGSAKKGPGRKKKGGSD-SDSDEDWKKSKPAKGAKKKGAA----------KSTGYTRPYNLSPELAAICGAEALPRHEVVKKVWAIIKERNLYDPKNKQYAICDSELQKVIGVKRFRTFGMLKYLKPHF 249
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|1061130008|ref|XP_017889682.1| (PREDICTED: upstream activation factor subunit spp27 [Ceratina calcarata]) HSP 1 Score: 144.05 bits (362), Expect = 3.242e-38 Identity = 99/269 (36.80%), Postives = 149/269 (55.39%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGGGGG---------FIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 M++I+ EL++++ AILK+ADL T S KKVR+Q+E L DLT RK+E++ ++ E + E + DG + ++ A ++ E E E ++ + + AK PAK K + A+ A+ + +P K K + + ++ + ED K KK +GGG G + + + LS +LAA+VG E RHEVVK++W+ IK NL DPKNKQ+A CDD+LLKVIG K+FR FGM K+LK+H Sbjct: 1 MADISNEELRKEITAILKDADLTTMSAKKVRLQIEGKLDIDLTERKKEVDTLVMECLQE------KQDGAKKKKKTASEESEDGEEEEEEGSEEEEEEEEKKPAKRSPAKKPVNKRKKGSSDDEESASDDDASDEEYSPKKAKATPKKGKPGKKGKKKGSDSDSDEDW---GKNKKAQGGGAKRGASGGKGKGGYTRAITLSPELAAVVGAEQMARHEVVKKIWSIIKERNLYDPKNKQYAICDDELLKVIGVKRFRTFGMMKYLKNHF 260
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|195377146|ref|XP_002047353.1| (uncharacterized protein Dvir_GJ11979 [Drosophila virilis] >gi|194154511|gb|EDW69695.1| uncharacterized protein Dvir_GJ11979 [Drosophila virilis]) HSP 1 Score: 143.28 bits (360), Expect = 4.824e-38 Identity = 96/264 (36.36%), Postives = 143/264 (54.17%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEAD---GDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEA-EGEKAEDEKGEPKPKKKRGGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L L +RK+E +KI+ EV+NE E+++ D G + D E DD + E EV + K AP + QP K K +A K + A +D+ D + E + + + + G GF + LS +L+A++G +S PRHEVVK+VWA IK +L DPKNKQFA CDD+L+KV+ K+FR FGM K LK H Sbjct: 1 MSDISSTQLRSEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEEDDDDEDDGKDPDAEPQDDSDPSEEDEVASSSEEEKKKKPAPKKRPQPTKH-------------------KLSAKKKRKSLNADDSGTESDAGSDSDYEVVKKPAPKKKAAKSAGSGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 245
BLAST of upstream activation factor subunit uaf30 vs. nr
Match: gi|1189083042|ref|XP_020809770.1| (upstream activation factor subunit spp27 [Drosophila serrata] >gi|1189083044|ref|XP_020809771.1| upstream activation factor subunit spp27 [Drosophila serrata]) HSP 1 Score: 139.428 bits (350), Expect = 1.215e-36 Identity = 97/263 (36.88%), Postives = 145/263 (55.13%), Query Frame = 0 Query: 1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAAAAKTTPAKTAGAKAKPTDSDEDDEPEAEGEKAEDEKGEPKPKKKRGGGG---GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 260 MS+I+ +L+R+++++LK+ADL T S K+VR Q+E L L RK+E ++I+ +V+NE E+++ + D D +A DDE E + +N ++S+ + A+ K P + P K KT A +G T+SD + + E K K + K G GF + LS +L+A++G S PRHEVVK+VWA IK +L DPKNKQFA CDD+L+KV+ ++FR FGM K LK H Sbjct: 1 MSDISSEDLRREIQSVLKDADLSTISAKRVREQVEGKLNCSLLNRKKEFDRIVMDVINEQQDEEDDEEDDGKDPDADPDDES----ESSEVENMSSSE--------EEAQKQKKKPGPKKRTQPIKHKTGPKKKRKTLNADDSG-----TESDAGSDSDYEVVKKPAAKKKAKSSGTTASGAARKSTGFTRAYNLSPELSALMGAPSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFRTFGMLKHLKPHF 246 The following BLAST results are available for this feature:
BLAST of upstream activation factor subunit uaf30 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of upstream activation factor subunit uaf30 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 4
BLAST of upstream activation factor subunit uaf30 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold338_size202645:166743..167972+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold338_size202645-snap-gene-1.16 ID=maker-scaffold338_size202645-snap-gene-1.16|Name=upstream activation factor subunit uaf30|organism=Tigriopus kingsejongensis|type=gene|length=1230bp|location=Sequence derived from alignment at scaffold338_size202645:166743..167972+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'upstream activation factor subunit uaf30' has the following synonyms
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