transcription factor gata-5, maker-scaffold346_size200932-snap-gene-1.16 (gene) Tigriopus kingsejongensis

Overview
Nametranscription factor gata-5
Unique Namemaker-scaffold346_size200932-snap-gene-1.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000003992 (supercontig:LSalAtl2s:LSalAtl2s213:422855:424673:-1 gene:EMLSAG00000003992 transcript:EMLSAT00000003992 description:"maker-LSalAtl2s213-snap-gene-4.20")

HSP 1 Score: 86.2705 bits (212), Expect = 1.196e-19
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANI 145
            CC NC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ MRKD +  R RK  + +  K       +N     + LK ++
Sbjct:  239 CCTNCGTSTTTLWRRNNDGEPVCNACGLYYKLHSVNRPLAMRKDGIQTRKRKQKSSALTKKSFKASEVNKKSSSSMLKMDL 319
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000005033 (supercontig:LSalAtl2s:LSalAtl2s261:433616:435787:-1 gene:EMLSAG00000005033 transcript:EMLSAT00000005033 description:"maker-LSalAtl2s261-augustus-gene-3.16")

HSP 1 Score: 83.5741 bits (205), Expect = 1.293e-18
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 0 
Query:   62 KDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANIPGFDANFVKLSLEGSCIESKLFDSHDNAYTKDSSQHDSSYPNGSLMF-----NEETEDDIQSSNASVTISAL-MESGFQPSQINFSHLQMPKSHKGFHKRRQQCN 244
            K++ C NC T+TTSLWRR+  GS +CNACGLY+KLHG+ RP+  RKD +  R RK     N  PK  KK  N    RA  KA                               TKD +Q  S   + + +F       +   +   S   V ++ L +  GF P+ IN S+L +P  ++ + +RR + N
Sbjct:  366 KNSECVNCFTKTTSLWRRDGSGSSICNACGLYFKLHGVDRPLQYRKDHIQTRKRK----PNSAPKSKKKCAN----RA--KA-----------------------------VTTKDPNQRKSHEASSTSIFRSPPPPPQNRQNYSQSPPQVVMTPLGLGLGFDPATINLSNLTLP--NRNYTRRRLRIN 513
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000271 (supercontig:LSalAtl2s:LSalAtl2s1041:63939:77263:1 gene:EMLSAG00000000271 transcript:EMLSAT00000000271 description:"maker-LSalAtl2s1041-snap-gene-0.35")

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-17
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVC-NRNRKDLAHSNVK-PKKCKKSLNSSPKRAPLK 142
             CANC T  T+LWRRN+ G PVCNACGLY+KLH   RP+ M+KD V   R RK  +  N + P K KKS   SP    L+
Sbjct:  393 VCANCATTKTTLWRRNNNGEPVCNACGLYYKLHRTPRPLAMKKDGVIQTRKRKPKSIVNHEHPVKVKKSQMPSPNTLELQ 472
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000008797 (supercontig:LSalAtl2s:LSalAtl2s547:87074:89043:1 gene:EMLSAG00000008797 transcript:EMLSAT00000008797 description:"maker-LSalAtl2s547-augustus-gene-0.8")

HSP 1 Score: 77.7962 bits (190), Expect = 5.696e-17
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            G+ +P+V    +       + T C+NC T  T+LWRRN  G PVCNACGLY KLH I RP+ ++KD +  RNRK
Sbjct:  206 GMNRPLVKPKRKITTTPKREGTVCSNCKTTNTTLWRRNHIGEPVCNACGLYHKLHKIARPITLKKDGIQTRNRK 279

HSP 2 Score: 56.225 bits (134), Expect = 1.775e-9
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKD 117
            C NC   +T LWRR   G  +CNACGLY+K++G+ RP+   K K+    +++
Sbjct:  174 CVNCGATSTPLWRRXGNGHYLCNACGLYYKMNGMNRPLVKPKRKITTTPKRE 225
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000540 (supercontig:LSalAtl2s:LSalAtl2s1088:53016:73480:1 gene:EMLSAG00000000540 transcript:EMLSAT00000000540 description:"maker-LSalAtl2s1088-augustus-gene-0.12")

HSP 1 Score: 70.4774 bits (171), Expect = 2.793e-14
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            G  +P+V            + T C+NC T  T+LWRR   G  VCNACGLY KLH   RP+ ++K+ +  RNRK
Sbjct:  228 GSNRPLVKPKNSRVSTSKREGTVCSNCKTNQTTLWRRTPSGETVCNACGLYQKLHNTPRPITLKKECIQTRNRK 301

HSP 2 Score: 54.6842 bits (130), Expect = 5.424e-9
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRP-VHMRKDKVCNRNRKDLAHSNVK 124
            C NC   +T LWRR+  G  +CNACGLY+K++G  RP V  +  +V    R+    SN K
Sbjct:  196 CVNCGATSTPLWRRDGNGHYLCNACGLYYKMNGSNRPLVKPKNSRVSTSKREGTVCSNCK 255
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000541 (supercontig:LSalAtl2s:LSalAtl2s1088:79520:96507:-1 gene:EMLSAG00000000541 transcript:EMLSAT00000000541 description:"maker-LSalAtl2s1088-augustus-gene-1.12")

HSP 1 Score: 70.0922 bits (170), Expect = 5.354e-14
Identity = 34/63 (53.97%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:   62 KDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            + T CANC T TT+LWRRN  G PVCNACGLY+KLH         KD +  RNRK    + VK
Sbjct:  392 EGTICANCKTTTTTLWRRNPNGEPVCNACGLYYKLH--------NKDGIQTRNRKLSTKTKVK 446

HSP 2 Score: 55.8398 bits (133), Expect = 2.633e-9
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            C NC    T LWRR+  G  +CNACGLY+K++G  RP+   K ++ +  R+    +N K
Sbjct:  342 CVNCGATATPLWRRDRNGHYLCNACGLYYKMNGQNRPLIKPKKRLSSTKREGTICANCK 400
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000008794 (supercontig:LSalAtl2s:LSalAtl2s547:174889:177327:-1 gene:EMLSAG00000008794 transcript:EMLSAT00000008794 description:"maker-LSalAtl2s547-snap-gene-1.11")

HSP 1 Score: 63.1586 bits (152), Expect = 1.936e-12
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:   40 IKSGVKKPVVSLWGENRGARLSKD-TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRK 107
            + +GV +P++    + R   L +  T C+NC T TT+LWRRN  G+PVCNACGLY+KLH  +     RK
Sbjct:   65 MNNGVNRPLIK--PKRRIIPLKRTGTSCSNCKTTTTTLWRRNHDGNPVCNACGLYYKLHSAEIQTRNRK 131
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000537 (supercontig:LSalAtl2s:LSalAtl2s1088:114721:116639:1 gene:EMLSAG00000000537 transcript:EMLSAT00000000537 description:"maker-LSalAtl2s1088-snap-gene-1.14")

HSP 1 Score: 58.5362 bits (140), Expect = 1.085e-10
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHG 98
            C+NCNT TT+LWRRN  G PVCNACGLY+KLHG
Sbjct:  116 CSNCNTTTTTLWRRNGTGEPVCNACGLYYKLHG 148

HSP 2 Score: 54.6842 bits (130), Expect = 1.889e-9
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            C NC   TT LWRR+  G  +CNACGLY+K++G  RP+   K K+  + R     SN 
Sbjct:   62 CVNCXATTTPLWRRDGNGHYLCNACGLYYKMNGTNRPLVKPKRKMNTQKRVGXQCSNC 119
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|1169849|sp|P43693.1|GATA6_CHICK (RecName: Full=Transcription factor GATA-6; AltName: Full=GATA-binding factor 6)

HSP 1 Score: 83.5741 bits (205), Expect = 2.055e-17
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CANC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  235 CANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRK 285

HSP 2 Score: 57.3806 bits (137), Expect = 2.218e-8
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0 
Query:   60 LSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            LS+   C NC +  T LWRR+  G+ +CNACGLY K++G+ RP+   + +V +  R  L+ +N
Sbjct:  175 LSESRECVNCGSIQTPLWRRDGTGNYLCNACGLYTKMNGLSRPLIKPQKRVPSSRRLGLSCAN 237
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|215273987|sp|Q92908.2|GATA6_HUMAN (RecName: Full=Transcription factor GATA-6; AltName: Full=GATA-binding factor 6)

HSP 1 Score: 84.3445 bits (207), Expect = 2.296e-17
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CANC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  444 CANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRK 494

HSP 2 Score: 56.9954 bits (136), Expect = 3.924e-8
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:   60 LSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            LS+   C NC +  T LWRR+  G  +CNACGLY K++G+ RP+   + +V +  R  L+ +N
Sbjct:  384 LSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCAN 446
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|2494686|sp|Q91678.1|GAT6A_XENLA (RecName: Full=GATA-binding factor 6-A; AltName: Full=Transcription factor xGATA-6a)

HSP 1 Score: 83.1889 bits (204), Expect = 2.960e-17
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CANC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  236 CANCHTSTTTLWRRNTEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRK 286

HSP 2 Score: 56.225 bits (134), Expect = 6.013e-8
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            C NC +  T LWRR+  G  +CNACGLY K++G+ RP+   + +V +  R  LA +N
Sbjct:  182 CVNCGSVQTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRVPSSRRIGLACAN 238
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|3183008|sp|P70005.1|GAT6B_XENLA (RecName: Full=GATA-binding factor 6-B; AltName: Full=Transcription factor xGATA-6b)

HSP 1 Score: 83.1889 bits (204), Expect = 3.078e-17
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CANC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  236 CANCHTTTTTLWRRNTEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRK 286

HSP 2 Score: 56.6102 bits (135), Expect = 4.232e-8
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            C NC +  T LWRR+  G  +CNACGLY K++G+ RP+   + +V +  R  LA +N
Sbjct:  182 CVNCGSVQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRIGLACAN 238
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|120955|sp|P17678.1|GATA1_CHICK (RecName: Full=Erythroid transcription factor; AltName: Full=Eryf1; AltName: Full=GATA-binding factor 1; Short=GATA-1; AltName: Full=NF-E1 DNA-binding protein; Short=NF-E1a)

HSP 1 Score: 82.4185 bits (202), Expect = 3.089e-17
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:   64 TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            T C+NC T TT+LWRR+  G PVCNACGLY+KLH + RP+ MRKD +  RNRK
Sbjct:  162 TVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRK 214

HSP 2 Score: 53.5286 bits (127), Expect = 3.104e-7
Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPL 141
            C NC    T LWRR+  G  +CNACGLY +L+G  RP+   K ++    R     SN     C+ S  +  +R+P+
Sbjct:  110 CVNCGATATPLWRRDGTGHYLCNACGLYHRLNGQNRPLIRPKKRLLVSKRAGTVCSN-----CQTSTTTLWRRSPM 180
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1199394354|ref|XP_021192285.1| (GATA-binding factor A-like isoform X3 [Helicoverpa armigera])

HSP 1 Score: 96.2857 bits (238), Expect = 1.286e-19
Identity = 58/145 (40.00%), Postives = 75/145 (51.72%), Query Frame = 0 
Query:    5 PAHESRRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN-VKPKK--CKKSLNSSPKRAPLKANIP 146
            P    +RP+ Y      L+R  K  T    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK     N  KP +   KK  +SSP     K +IP
Sbjct:   88 PYDALQRPTAYGADADLLTRFYKEGTVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGTKPAQDANKKDEHSSPGMDDSKQSIP 222
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|524949112|ref|XP_005074576.1| (transcription factor GATA-5 [Mesocricetus auratus])

HSP 1 Score: 95.5153 bits (236), Expect = 4.432e-19
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANIPGFDANFVKLSLEGSCIESKLFDSHDNAYTKDSSQHDSSYPNGSLMFNEETED 198
            GV +P+V        +R S   CC+NC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK        P K K S  S+   A     +P  + +   L  E S + S +F     +    SS  + S     L F  E ED
Sbjct:  229 GVNRPLVRPQKRLSSSRRS-GLCCSNCHTATTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKP-----KNPAKIKGSSGSTANTAACSPALPNTEGSATTLKAEPS-LASPVFPGPTISSQASSSPANESLAPNHLEFKFEPED 377
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|910354850|ref|XP_013181276.1| (PREDICTED: transcription factor GATA-5-like isoform X1 [Papilio xuthus])

HSP 1 Score: 94.7449 bits (234), Expect = 5.493e-19
Identity = 56/140 (40.00%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK-DLAHSNVKPKK--CKKSLNSSPKRAPLKANIP 146
            +RP  Y      L+R  K  +    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK   + S  KP +   KK  +SSP     K N+P
Sbjct:   97 QRPPAYGADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPPQDNVKKDEHSSPGIDESKPNVP 226
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|943966372|ref|XP_014365244.1| (PREDICTED: GATA-binding factor A-like [Papilio machaon])

HSP 1 Score: 93.9745 bits (232), Expect = 1.016e-18
Identity = 56/140 (40.00%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK-DLAHSNVKPKK--CKKSLNSSPKRAPLKANIP 146
            +RP  Y      L+R  K  +    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK   + S  KP +   KK  +SSP     K N+P
Sbjct:   97 QRPPAYGADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPPQDNAKKDDHSSPGIDESKPNVP 226
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1274118506|ref|XP_022819744.1| (transcription factor GATA-4-like isoform X2 [Spodoptera litura])

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            +RP+ Y      L+R  K  T    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK
Sbjct:   93 QRPTAYGADADLLTRFYKEGTVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRK 189
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|157169241|gb|ABV25955.1| (GATA-binding transcription factor B2, partial [Capitella teleta])

HSP 1 Score: 92.0485 bits (227), Expect = 2.092e-18
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   40 IKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            + SG  KPV+   G  R         CANC+T TT+LWRRN++G PVCNACGLY+KLHG+ RP+ M+K+ +  R RK
Sbjct:  102 VMSGFAKPVMKTSGGRRSVSRRVGLSCANCHTSTTTLWRRNNEGEPVCNACGLYFKLHGVNRPMSMKKEGIQTRKRK 178
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1276822401|gb|PIO60070.1| (GATA zinc finger, partial [Teladorsagia circumcincta])

HSP 1 Score: 87.4261 bits (215), Expect = 2.720e-18
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPL 141
            C NCNT TT+LWRRN  G PVCNACGLY+KLH ++RP+ M+KD +  RNRK ++    KPK  + +   S K AP+
Sbjct:   10 CVNCNTNTTTLWRRNGGGEPVCNACGLYYKLHQVERPLTMKKDGIQTRNRK-MSTKGKKPKTEEPNTWGSMKTAPM 84
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|645021119|ref|XP_008207460.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X3 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.714e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  558 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 628
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1032764792|ref|XP_016841133.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X1 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.758e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  563 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 633
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1032764797|ref|XP_016841135.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X4 [Nasonia vitripennis] >gi|1032764799|ref|XP_016841136.1| PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X4 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.954e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  549 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 619
The following BLAST results are available for this feature:
BLAST of transcription factor gata-5 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 8
Match NameE-valueIdentityDescription
EMLSAG000000039921.196e-1946.91supercontig:LSalAtl2s:LSalAtl2s213:422855:424673:-... [more]
EMLSAG000000050331.293e-1833.33supercontig:LSalAtl2s:LSalAtl2s261:433616:435787:-... [more]
EMLSAG000000002712.709e-1752.50supercontig:LSalAtl2s:LSalAtl2s1041:63939:77263:1 ... [more]
EMLSAG000000087975.696e-1748.65supercontig:LSalAtl2s:LSalAtl2s547:87074:89043:1 g... [more]
EMLSAG000000005402.793e-1443.24supercontig:LSalAtl2s:LSalAtl2s1088:53016:73480:1 ... [more]
EMLSAG000000005415.354e-1453.97supercontig:LSalAtl2s:LSalAtl2s1088:79520:96507:-1... [more]
EMLSAG000000087941.936e-1246.38supercontig:LSalAtl2s:LSalAtl2s547:174889:177327:-... [more]
EMLSAG000000005371.085e-1078.79supercontig:LSalAtl2s:LSalAtl2s1088:114721:116639:... [more]
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BLAST of transcription factor gata-5 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1169849|sp|P43693.1|GATA6_CHICK2.055e-1764.71RecName: Full=Transcription factor GATA-6; AltName... [more]
gi|215273987|sp|Q92908.2|GATA6_HUMAN2.296e-1764.71RecName: Full=Transcription factor GATA-6; AltName... [more]
gi|2494686|sp|Q91678.1|GAT6A_XENLA2.960e-1764.71RecName: Full=GATA-binding factor 6-A; AltName: Fu... [more]
gi|3183008|sp|P70005.1|GAT6B_XENLA3.078e-1764.71RecName: Full=GATA-binding factor 6-B; AltName: Fu... [more]
gi|120955|sp|P17678.1|GATA1_CHICK3.089e-1764.15RecName: Full=Erythroid transcription factor; AltN... [more]

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BLAST of transcription factor gata-5 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1199394354|ref|XP_021192285.1|1.286e-1940.00GATA-binding factor A-like isoform X3 [Helicoverpa... [more]
gi|524949112|ref|XP_005074576.1|4.432e-1937.82transcription factor GATA-5 [Mesocricetus auratus][more]
gi|910354850|ref|XP_013181276.1|5.493e-1940.00PREDICTED: transcription factor GATA-5-like isofor... [more]
gi|943966372|ref|XP_014365244.1|1.016e-1840.00PREDICTED: GATA-binding factor A-like [Papilio mac... [more]
gi|1274118506|ref|XP_022819744.1|1.482e-1842.99transcription factor GATA-4-like isoform X2 [Spodo... [more]
gi|157169241|gb|ABV25955.1|2.092e-1851.95GATA-binding transcription factor B2, partial [Cap... [more]
gi|1276822401|gb|PIO60070.1|2.720e-1853.95GATA zinc finger, partial [Teladorsagia circumcinc... [more]
gi|645021119|ref|XP_008207460.1|3.714e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]
gi|1032764792|ref|XP_016841133.1|3.758e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]
gi|1032764797|ref|XP_016841135.1|3.954e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold346_size200932supercontigscaffold346_size200932:154144..155133 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold346_size200932-snap-gene-1.16-mRNA-1maker-scaffold346_size200932-snap-gene-1.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold346_size200932:154144..155133+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold346_size200932-snap-gene-1.16 ID=maker-scaffold346_size200932-snap-gene-1.16|Name=transcription factor gata-5|organism=Tigriopus kingsejongensis|type=gene|length=990bp|location=Sequence derived from alignment at scaffold346_size200932:154144..155133+ (Tigriopus kingsejongensis)
ATGGTGGCCCAACCAGCTCACGAGTCTCGAAGACCTTCCCTGTACGATAC
TTCCGAGGGTGACTTGAGTCGGCGGCTCAAACCCACCACCACCACCGGCA
CATTGGGGGGTCCTGGCATCAAATCCGGAGTGAAGAAACCAGTGGTGAGT
CTGTGGGGCGAGGTGGTTTGAGTTCCCTTACAATCAGGGATCTAACGGAT
TGGTTGGATATTTCCAGAACCGTGGAGCGCGCTTGAGCAAAGATACGTGC
TGTGCGAATTGTAATACTCAGACCACCTCTCTGTGGCGACGGAACAGCCA
AGGGTCACCCGTGTGCAACGCCTGCGGGCTTTATTGGAAGCTCCACGGCA
TCCAGCGACCGGTTCATATGCGCAAGGACAAGGTCTGCAATCGCAACCGC
AAGGACCTCGCTCATTCTAATGTGAAGCCCAAGAAGTGCAAAAAAAGTCT
GAATTCCAGCCCCAAGAGGGCGCCACTCAAAGGTAAAGAGAACTGTCCTC
AATCGTCCTCCGTGTTGTCCTTGCTCCTGTGCTGTCCATCGATCCTTCCC
ACGTCCACCATGTGTGCTATTCCACCAGCTTCGCTTGAACACAGCTTCCA
ACTCTTGCAGACCTGTGAATGAAGAATCTCATTCCTATTACTTCCTTCCC
CCGATCAGCCAACATCCCCGGGTTCGACGCAAACTTTGTGAAACTGTCGC
TAGAGGGCAGCTGCATCGAATCCAAATTATTTGATAGCCATGACAATGCC
TATACCAAAGACTCCTCACAACACGACTCTAGTTACCCCAATGGCTCGCT
AATGTTCAATGAAGAGACTGAAGACGACATTCAGTCCAGCAATGCGAGTG
TCACTATCTCGGCTTTGATGGAAAGCGGCTTCCAGCCTTCGCAAATCAAC
TTTTCTCATCTGCAAATGCCAAAAAGTCACAAAGGGTTCCACAAAAGAAG
ACAGCAATGCAACAGTATGAACAACAACCACGCCAACTGA
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Synonyms
The feature 'transcription factor gata-5' has the following synonyms
Synonym
Tk04303
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