nicotinic acetylcholine receptor subunit a6 isoform xii, maker-scaffold34_size539781-snap-gene-1.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007472 (supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-1 gene:EMLSAG00000007472 transcript:EMLSAT00000007472 description:"maker-LSalAtl2s429-augustus-gene-2.12") HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 279/376 (74.20%), Postives = 305/376 (81.12%), Query Frame = 0 Query: 150 DQHCDLKFGSWTYSGWKLDLAMKDR-DGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAG----GVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSC--------------SATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 Q D+K + + ++LDL +KD GGDISSFI NGEWDLIGVPG R E+FYECCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVT+LLSLTVF+N VS+ MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH+MP WVRT FLQW+PW+LRMNRPGKPITRK+ILMTNR+KELE+KEK+SKSLLANVLDMDDDFRPMSVAG G + G + ASGFMRVNGNPM+ P P PT+ H + +NRELQCILKELKFITNRMK+ DEEEEI+ DWKFAAMVIDRFCLITFTAFTVITT+AVLLSAPHIIVE Sbjct: 52 QQIIDVKLNN-EHRFFQLDLTLKDEGKGGDISSFIPNGEWDLIGVPGTRHELFYECCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHDMPPWVRTAFLQWLPWILRMNRPGKPITRKSILMTNRIKELELKEKTSKSLLANVLDMDDDFRPMSVAGGYGTGANSGSTPGASGFMRVNGNPMDSSGGAPVTDKAPPPPTSSPYPIHGAPSAPPPPPPPGSCTFGTGGSNRELQCILKELKFITNRMKIMDEEEEIMSDWKFAAMVIDRFCLITFTAFTVITTVAVLLSAPHIIVE 426 HSP 2 Score: 71.2478 bits (173), Expect = 1.456e-13 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 22 METICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTD 73 +ETICGY+EK+LL L++ YN L RPVV ES+ L+LTFGITLQQIIDV + Sbjct: 10 IETICGYHEKRLLFALIQNYNQLXRPVVXESEPLMLTFGITLQQIIDVKLNN 61
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10") HSP 1 Score: 403.675 bits (1036), Expect = 2.669e-137 Identity = 219/396 (55.30%), Postives = 262/396 (66.16%), Query Frame = 0 Query: 167 LDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVT-----------------------------ILLSLTVFLNTVSESMPATSDAVPLI------------STYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMS-------------VAGGVSGGY---SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIV 505 LDL ++ D G S+++ NGEW L+GVPGKR+E+FY+CCPEPY+D+TF I IRRRTLYYFFNLIVPCVLI+SMA+LGFTLPPDSGEKL+L VT ILLSLTVF VSESMPATSDA+PL+ TYFNCIM MVASSVV T+++LNYHHR A+THEMP+WVR +FLQW+PW+LRM RPG+ ITRKTILM N+MKEL++KE+SSKSLLANVLDMDDDFRP S +AGG G S T SGF G P S T+ T +REL ILKE++ IT++++ ++ I DWKFAAMV+DR CLITFT FT+I T+AVL SAPHIIV Sbjct: 71 LDLQTQN-DEGVTSTYVLNGEWALLGVPGKRNEVFYDCCPEPYLDVTFVIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPNWVRCVFLQWIPWVLRMGRPGEKITRKTILMQNKMKELDLKERSSKSLLANVLDMDDDFRPASTLPHIHPHHPSHSLAGGSGTGSTANSSTKSGFRVTPGLHQPPPPPPPPPLGNSTGDVTLGDGM-TSGIPPGIHRELSLILKEIRVITDKIREDEDTAAIENDWKFAAMVLDRLCLITFTMFTIIATVAVLFSAPHIIV 464 HSP 2 Score: 58.9214 bits (141), Expect = 1.303e-9 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDV 69 G +E++LL+DL YN LERPV NES+ L L+FG+TLQQIIDV Sbjct: 28 GPHERRLLNDLXAIYNNLERPVFNESEPLKLSFGLTLQQIIDV 70
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 278.1 bits (710), Expect = 2.784e-87 Identity = 146/337 (43.32%), Postives = 209/337 (62.02%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL--DVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGK 342 K+L DDLL YN L RPVVN SD + + + L Q+IDVN W DY + W EYG VD + + +W PD+++YN+AD F+ T T + + G ++ PP I+ S+C++D+ +FPFD+Q C +KFGSWTY G+++DL ++ + G D+S F + EWD++ VP R+ Y CC EPY+DITFNI +RR+TL+Y NLI+PC+ IS + +L F LP DSGEK + ++ILLSLTVF ++E +P TS VPL+ + M++ S+ +TVVVLN H R+ +TH M WVR +F+ +P LL M RPG+ Sbjct: 24 KRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHQEEEQGTNVVNIGVDLSEFYMSVEWDILAVPAIRNVKVYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKXNVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMAPWVRRVFIHILPRLLVMRRPGQ 360
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 272.707 bits (696), Expect = 1.108e-85 Identity = 142/347 (40.92%), Postives = 214/347 (61.67%), Query Frame = 0 Query: 18 GNTLMETICGYYE-KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRP 340 G ++C + K+L DDLL Y+ L RPV N SD L + G+ L QII ++ W DY L W +YG V + + + +W+PD+++YN+AD ++ T T V+ G ++ PP I+KS+C+ID+ +FPFD+Q C +KFGSWTY G+ +DL ++ G D+ + + EWD++ P R+E +Y CC EPY DI F + +RR++L+Y N+I+PCV IS +++L F LP DSGEK++L ++ILLSLTVF ++E +P+TS AVPL+ Y M++V SV+LT+ VLN + RT TH+M WVR F++++P L + RP Sbjct: 15 GTVYFSSVCANPDAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKGSSSEIEIGMDLQEYYISTEWDVMTAPAVRNEKYYPCCEEPYPDIIFYLTLRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPSTSIAVPLLGKYLLFTMILVTFSVMLTIGVLNVNFRTPATHKMAPWVRKTFVEFLPRFLFIRRP 361
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 262.307 bits (669), Expect = 1.088e-83 Identity = 124/281 (44.13%), Postives = 178/281 (63.35%), Query Frame = 0 Query: 68 DVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDL----AMKDRD----GGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRP 340 D W DY W+ SEYG V + + + +W+PD+++YN+AD + T T ++ +DG ++ PP IFKS+C+ID+ +FPFD Q C LKFGSW++ G+++DL + D D G D+S + N EWD++ VP +R Y CCPEPY DI F+I IRR+ L+Y NLI+PCV I +++L F LP SGEK L + IL+S T++ V E +PATS +PL+ Y M+ +A +V LT ++LN H+R TH MP WVR F+Q +P +L M P Sbjct: 8 DHEWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGFQVDLVHINSQPDNDTVSYGMDLSEYYLNVEWDILEVPAERHVKTYPCCPEPYPDIYFSIIIRRKPLFYVVNLIIPCVGIFYLSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAVTLTTIILNLHYRKPSTHRMPQWVRRTFIQRLPRILLMRVP 288
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 261.922 bits (668), Expect = 2.192e-80 Identity = 140/345 (40.58%), Postives = 222/345 (64.35%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAM-KDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKEL 358 E++L+ DL R YN L RPV N + + + FG+ Q+I+VN W DY L W+ ++YG + +R+ P ++W PD++++N+AD ++ +++NV++ DG L+VPP I++S+C ID+T+FPFD Q C +KFGSWT++G ++ L + ++D D+S + +G WD+I VP + I + P DI+F I IRR+TL+Y NLI+P VLIS + +L F LP ++GEK+TL ++ILLSL VFL VS+ +P TS +PLI+ Y +M S+++TVV++N++ R TH MP+W+R LFL+++P +L M RP K R + M + + + Sbjct: 27 EERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTGDQVSLTLYNNKDYVDLSDYWKSGTWDIIEVPAYLN-IHNDTLPTE-TDISFYITIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVVIINWNFRGPRTHSMPNWIRVLFLKYLPIVLFMRRPKKTRLRWMMEMPGQSRRI 369 HSP 2 Score: 55.8398 bits (133), Expect = 1.555e-8 Identity = 30/96 (31.25%), Postives = 45/96 (46.88%), Query Frame = 0 Query: 408 EQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 E+E Q PP + +S A + E + ++FI ++ DE +I DWKF AMV+D L F T + T+ +L+ APHI Sbjct: 528 EEEDQAQQHPPPPHHRGGRRNSDEDDGSEAFLSPEAYRATQAVEFIAEHLRNEDEYLQIREDWKFVAMVVDXXQLYVFFXVTTVGTVGILMDAPHI 623
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 235.728 bits (600), Expect = 1.294e-73 Identity = 125/333 (37.54%), Postives = 190/333 (57.06%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIH-----PK---------RLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEP-YVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQ 329 G EKK+L+ + YN LERPV + + + L+ G++L++II ++ W D+NL WNRSEY ++ ++I PK +W PD+L+YNSA F+ + N+++S++G Y+PPGI +STC+ EW+++G+P R+E Y+CC + + DIT+ I +RRRTLYY N +PCVLI+SMA+LGF PP+SGEK+TL++TIL+SLT F+N V++ P +S PL+ YF+CIM+M+ASSV+ +++V+NYHHR E +MP W R +F + Sbjct: 20 GQTEKKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQSTCE----------------------------------------------EWEVLGMPAIRTEDIYDCCKDKIFQDITYTIQLRRRTLYYLGNWTLPCVLIASMAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSSKT-PLVGIYFSCIMIMIASSVICSILVINYHHRLTEYGDMPKWFRFIFFK 305
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 196.438 bits (498), Expect = 4.408e-58 Identity = 136/452 (30.09%), Postives = 207/452 (45.80%), Query Frame = 0 Query: 29 YEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEE 465 + K+L DDLL YN L RPV N ++ L + G+ L Q+IDV+ W DY L W EYG V+ + + + +W+PD++++N+AD +++ T T + + G ++ PP I+KS+CKI++ WFPFD+Q CD+KFGSWTY G+++DL D++ G S+ + G I + YY L C+ I LLSLTVF ++E +P TS AVPL+ Y M++V S+ +TV VLN H R+ TH M W+R +F+ MP +L M RP + E +K +S+ L+ N D D + ++ G + T + NG EQ+ P S S A C L+ ++FI +K D++ E Sbjct: 26 HAKRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGFQVDLKHVDQEKG--SNVVKVG-------------------------------IDLKEFYYSVTL---CISI------------------------LLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPATHRMSPWMRKIFIHIMPRMLLMTRPH--------YIPRYSAEPPLKSRSNDDLMYN---QDQDSKKLNGHCGPT-----TNEDQCKKNGKD-EQDSTKPNK---------------KKSISNVA-----CALRGVEFIAQHIKNADKDNE 380
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 194.897 bits (494), Expect = 5.974e-58 Identity = 111/283 (39.22%), Postives = 158/283 (55.83%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLA-MKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVA 297 K+L DDLL YN L RPV+N +D LL+ + L Q+IDVN W DY L W+ EYG V + + +W PD+++YN+AD F+ T T + +G + PP I+KS+C+ID+ +FPFD+Q C +KFGSWTY G+++DL M + DG ++ VP + I + R+TL+Y NLI+PC+ IS + +L F LP DSGEK+TL ++IL SL VF V E +P TS VPL+ Y M++V+ Sbjct: 54 KRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHMCEVDGTNV-------------VP---------------LGIDLSEFYIRKTLFYTVNLIIPCMGISFLTVLTFYLPSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 308
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 187.193 bits (474), Expect = 5.923e-56 Identity = 99/247 (40.08%), Postives = 142/247 (57.49%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKL 254 K+L DDLL YN L PVVN S+ + + + L Q+IDVN W DY L W+ +E +V + + P+ SAD F+ T T + G + PP I+ S+C++D+ +FPFD+Q C +KFGSWTY G+++DL D G D++ F + EWD++ VP R+ +Y CC EPY+DITFN+ +RR+TL+Y NLI+PC+ IS + +L F LP DSGEK+ Sbjct: 30 KRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE-NHVYNFYLFPR-----------SADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGYQVDLRHIDEVMGKPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYXCCXEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKV 264
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113067|sp|P22770.1|ACHA7_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 469.159 bits (1206), Expect = 6.553e-161 Identity = 242/505 (47.92%), Postives = 323/505 (63.96%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNR---MKELEMKEKSSKSLL-ANVLDMDDDFRPMSVAGGVSGGYS--MTASGFM--RVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 E++ G +++KL +LL+ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR +W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C+LKFGSWTY GW LDL M++ DIS +I+NGEWDL+G+PGKR+E FYECC EPY DITF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R + +EM S + N+L + FR G+ G + T SG + R+ +P E+E + P+ P +L IL+E+++I NR + DEEE I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 19 ESLQGEFQRKLYKELLKNYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQMQE---ADISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLSSMEMNTVSGQQCSNGNMLYI--GFR------GLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGHPSEGDP------------------DLAKILEEVRYIANRFRDQDEEEAICNEWKFAASVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|2506127|sp|P36544.5|ACHA7_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 463.766 bits (1192), Expect = 6.895e-159 Identity = 237/507 (46.75%), Postives = 315/507 (62.13%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I NGEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + V S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 13 AASLLHVSLQGEFQRKLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|66774011|sp|Q866A2.1|ACHA7_MACMU (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 460.685 bits (1184), Expect = 1.373e-157 Identity = 235/507 (46.35%), Postives = 314/507 (61.93%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I +GEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 13 AASLLHVSLQGEFQRKLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGMHCAPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1703074|sp|P54131.1|ACHA7_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 460.299 bits (1183), Expect = 1.684e-157 Identity = 236/507 (46.55%), Postives = 314/507 (61.93%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL DL++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DIS +I NGEWDL+GV GKRSE FYECC EPY D+TF + IRRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + S G RV +P E + P+ P +L IL+E+++I +R + DE E + +WKFAA V+DR CL+ F+ FT++ TI +L+SAP+ + Sbjct: 10 AASILHVSLQGEFQRKLYKDLVKNYNPLERPVANDSLPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMTWTDHYLQWNASEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACQHNERRCSLASVEMSAVAGPPATNGNLLYI--GFRGLDTMHCAPTPDSGVVCG--RVACSPTHDEHLLHAGQPSEGDP------------------DLAKILEEVRYIAHRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTILCTIGILMSAPNFV 491
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|146345356|sp|Q05941.2|ACHA7_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 455.292 bits (1170), Expect = 1.573e-155 Identity = 233/495 (47.07%), Postives = 311/495 (62.83%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKS--LLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 G ++++L +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DISS+I NGEWDL+G+PGKR+E FYECC EPY D+T+ + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + +N + FR + S G R+ +P E M A P+ P +L IL+E+++I NR + DE E I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 23 GEFQRRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCG--RLACSPTHDEHLMHGAHPSDGDP------------------DLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1351851|sp|P49582.1|ACHA7_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 453.751 bits (1166), Expect = 7.528e-155 Identity = 232/495 (46.87%), Postives = 310/495 (62.63%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKS--LLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 G ++++L +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DISS+I NGEWDL+G+PGKR+E FYECC EPY D+T+ + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + +N + FR + S G R+ +P E M P+ P +L IL+E+++I NR + DE E I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 23 GEFQRRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCG--RLACSPTHDEHLMHGTHPSDGDP------------------DLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1351844|sp|P48180.1|ACH1_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 442.965 bits (1138), Expect = 8.346e-151 Identity = 228/496 (45.97%), Postives = 306/496 (61.69%), Query Frame = 0 Query: 24 TICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 T+ E++L +DL+R YN LERPV N S+ + + + LQQIIDV+ W DYNL W+++EYGN+ VR ++W PD+L+YNS D FD T+QTN++V G +VPPGIFK +CKIDI WFPFD+Q C KFGSWTY G+KLDL G DIS +I+NGEW L +R+E FY+CCPEPY D+ F +H+RRRTLYY FNLI+PC+L + M LLGFTLPPD+GEK+TL +T+LLS+ FL+ VSE P TS+AVPL+ +F C M++V +S V TV VLN H+RT ETH+M W R L L W+PW+LRM RPG +T ++ K + S+SL+ N+ D+ +S A + + N + +P +S TT S Q T L I ELK +T RM GD+EE+ +WKFAAMV+DR CL FT F +++TI + SAP+++ Sbjct: 17 TLGSLQERRLYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL-QPATGGFDISEYISNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFSTK----PNRHSESLIRNI---KDNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSLGSIPSTMISSNGTTTDVSQQATLLI-------LHRIYHELKIVTKRMIEGDKEEQACNNWKFAAMVVDRLCLYVFTIFIIVSTIGIFWSAPYLV 497
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|224487629|sp|A8WQK3.2|ACH1_CAEBR (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 435.647 bits (1119), Expect = 7.035e-148 Identity = 228/502 (45.42%), Postives = 302/502 (60.16%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTI-----LMTNRMKE---LEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRE---LQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIV 505 E++L +DL+R YN LERPV N S+ + + + LQQIIDV+ W DYNL W+++EYGN+ VR ++W PD+L+YNS D FD T+QTN++V G +VPPGIFK +CKIDI WFPFD+Q C KFGSWTY G+KLDL G DIS ++ NGEW L +R+E FY+CCPEPY D+ F +H+RRRTLYY FNLI+PC+L + M LLGFTLPPD+GEK+TL +T+LLS+ FL+ VSE P TS+AVPL+ +F C M++V +S V TV VLN H+RT ETH+M W R L L W+PW+LRM RPG +T ++ NR E +K+ AN D D + VS G +T+ G + P+TM SS + + L I ELK +T RM GD+EE+ +WKFAAMV+DR CL FT F + +TI + SAP+++ Sbjct: 23 ERRLYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWKDYNLVWDQAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSSGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL-QPATGGFDISEYLPNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFASKPNRHSESLIRNIKDNEHSLSRANSFDADCRLNQYIMTQSVSNG--LTSMGSI----------------------PSTMISSTNGALTDVSQQATLLILHRIYHELKIVTKRMIEGDKEEQASNNWKFAAMVVDRLCLYVFTIFIIASTIGIFWSAPYLVA 499
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|91208254|sp|Q494W8.1|CRFM7_HUMAN (RecName: Full=CHRNA7-FAM7A fusion protein; AltName: Full=CHRNA7-DR1; AltName: Full=D-10) HSP 1 Score: 385.956 bits (990), Expect = 1.391e-129 Identity = 195/402 (48.51%), Postives = 252/402 (62.69%), Query Frame = 0 Query: 107 ADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 ADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I NGEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + V S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 28 ADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 404
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor) HSP 1 Score: 325.479 bits (833), Expect = 6.762e-104 Identity = 188/510 (36.86%), Postives = 286/510 (56.08%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLA----MKDRD-----GGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMK-ELEMKEKSSKSLLANVLDMD------DDFRPMS---VAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANR---ELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 K+L DDLL YN L RPV N +D +L+ G+ L Q+ID+N W D+ W+ SEYG V + + + +W+PD+++YN+AD + T T ++ + G ++ PP IFKS+C+ID+ +FPFD Q C +KFGSWTY G ++DL D+D G D+ + + EWD++GVP +R E +Y CC EPY DI FNI +RR+TL+Y NLI+PCV IS +++L F LP DSGEK+ L ++ILLS T+F +SE +P+TS A+PL+ Y M++V SVV+T+++LN H+R TH+M W+R+ F++ +P LL M P K + R L N++ L+ + L + + M+ D R M AGG +G + TA+ R +G + + P+ ++ + S A + EL+ + + FI + M+ DE DW F AMV+DR L F +++ T +L AP + Sbjct: 46 KRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVP-KDLLRD--LAANKINYGLKFSKTKFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATN--RFSGLVGALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSL 550
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|801391749|ref|XP_012057749.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7 [Atta cephalotes] >gi|1068404315|ref|XP_018049498.1| PREDICTED: neuronal acetylcholine receptor subunit alpha-7 [Atta colombica]) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 326/500 (65.20%), Postives = 385/500 (77.00%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGY-SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 E++CG +EK+LL+ LL YN LERPV NES+ L + FGITLQQIIDV+ WTDYNL WN SEYG V +RI P +LW PD+LMYNSADE FDGT+QTNVVV+H+G CLYVPPGIFKSTCKIDITWFPFDDQHCD+KFGSWTY G +LDL + ++GGD+S FI NGEW LIG+PGK++ + Y+CCPEPYVD+TF I IRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVFLN V+ESMP TSDAVPLI +YFNCIM MVASSVVLTV+VLNYHHR+ + + MP+W + +FLQW+P +LRM+RPGK IT+KTILM+NRMKELE++E+SSKSLLANVLD+DDDFR + A + GY S +A G P S P T+ + + S REL ILKEL+FIT+RMK DE++EII DWKFAAMV+DR CL FT FTV+ T+ +L APHIIV+ Sbjct: 54 ESLCGRHEKRLLNHLLANYNTLERPVANESEPLEVRFGITLQQIIDVDEKNQILTTNAWLKLEWTDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSQEGGDLSDFIMNGEWYLIGMPGKKNTLIYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNYHHRSPDRYVMPNWTKVVFLQWLPCVLRMSRPGKKITKKTILMSNRMKELELQERSSKSLLANVLDIDDDFRHGNSAANPASGYISRSAYG------------------TPLSTRPATVEETSASLPLSG-MQRELHTILKELQFITSRMKKSDEDDEIISDWKFAAMVVDRLCLFVFTLFTVLATVVILCRAPHIIVQ 534
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|746870395|ref|XP_011066380.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X1 [Acromyrmex echinatior] >gi|746870397|ref|XP_011066381.1| PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X1 [Acromyrmex echinatior]) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 326/500 (65.20%), Postives = 385/500 (77.00%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGY-SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 E++CG +EK+LL+ LL YN LERPV NES+ L + FGITLQQIIDV+ WTDYNL WN SEYG V +RI P +LW PD+LMYNSADE FDGT+QTNVVV+H+G CLYVPPGIFKSTCKIDITWFPFDDQHCD+KFGSWTY G +LDL + ++GGD+S FI NGEW LIG+PGK++ + Y+CCPEPYVD+TF I IRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVFLN V+ESMP TSDAVPLI +YFNCIM MVASSVVLTV+VLNYHHR+ + + MP+W + +FLQW+P +LRM+RPGK IT+KTILM+NRMKELE++E+SSKSLLANVLD+DDDFR + A + GY S +A G P S P T+ + + S REL ILKEL+FIT+RMK DE++EII DWKFAAMV+DR CL FT FTV+ T+ +L APHIIV+ Sbjct: 54 ESLCGRHEKRLLNHLLANYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWTDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSQEGGDLSDFIMNGEWYLIGMPGKKNTLIYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNYHHRSPDRYVMPNWTKIVFLQWLPCVLRMSRPGKKITKKTILMSNRMKELELQERSSKSLLANVLDIDDDFRHGNSAANPASGYISRSAYG------------------TPLSTRPATVEETSASLPLSG-MQRELHTILKELQFITSRMKKSDEDDEIISDWKFAAMVVDRLCLFVFTLFTVLATVVILCRAPHIIVQ 534
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|815798553|ref|XP_012219894.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Linepithema humile] >gi|815798555|ref|XP_012219895.1| PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Linepithema humile]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 326/500 (65.20%), Postives = 385/500 (77.00%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGY-SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 E++CG +EK+LL+ LL YN LERPV NES+ L + FGITLQQIIDV+ WTDYNL WN SEYG V +RI P +LW PD+LMYNSADE FDGT+QTNVVV+H+G CLYVPPGIFKSTCKIDITWFPFDDQHCD+KFGSWTY G +LDL + +GGD+S FI NGEW LIG+PGK++ I Y+CCPEPYVD+TF I IRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVFLN V+ESMP TSDAVPLI +YFNCIM MVASSVVLTV+VLNYHHR+ + + MP+WV+ +FLQW+P +LRM+RPGK IT+KTILM+NRMKELE++E+SSKSLLANVLD+DDDFR + A + GY S +A G P S P T+ + + S +EL ILKEL+FIT+RMK DE++E+I DWKFAAMV+DR CL FT FTV+ T+ +L APHIIV+ Sbjct: 35 ESLCGRHEKRLLNHLLANYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWTDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSEEGGDLSDFIMNGEWYLIGMPGKKNTIMYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNYHHRSPDRYVMPNWVKIVFLQWLPCVLRMSRPGKKITKKTILMSNRMKELELQERSSKSLLANVLDIDDDFRHGNSAANPASGYISRSAYG------------------TPLSARPATVEETSASLPLSG-MQKELHTILKELQFITSRMKKADEDDEVISDWKFAAMVVDRLCLFIFTLFTVLATVVILCRAPHIIVQ 515
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|752872403|ref|XP_011253437.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X2 [Camponotus floridanus] >gi|752872407|ref|XP_011253439.1| PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X2 [Camponotus floridanus] >gi|752872409|ref|XP_011253441.1| PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X2 [Camponotus floridanus]) HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0 Identity = 326/500 (65.20%), Postives = 385/500 (77.00%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGY-SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 E++CG +EK+LL+ LL YN LERPV NES+ L + FGITLQQIIDV+ WTDYNL WN +EYG V +RI P +LW PD+LMYNSADE FDGT+QTNVVV+H+G CLYVPPGIFKSTCKIDITWFPFDDQHCD+KFGSWTY G +LDL + +GGD+S FI NGEW LIG+PGK++ I Y+CCPEPYVD+TF I IRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVFLN V+ESMP TSDAVPLI +YFNCIM MVASSVVLTV+VLNYHHR+ + + MP+WV+ LFLQW+P +LRM+RPGK IT+KTILM+NRMKELE++E+SSKSLLANVLD+DDDFR + A + GY S +A G P S P T+ + + S +EL ILKEL+FIT+RMK DE++E+I DWKFAAMV+DR CL FT FTV+ T+ +L APHIIV+ Sbjct: 35 ESLCGRHEKRLLNHLLANYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWTDYNLQWNETEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSEEGGDLSDFIMNGEWYLIGMPGKKNTIMYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNYHHRSPDRYVMPNWVKILFLQWLPCVLRMSRPGKKITKKTILMSNRMKELELQERSSKSLLANVLDIDDDFRHGNSAANPASGYISRSAYG------------------TPLSTRPATVEETSASLPLSG-MQKELHTILKELQFITSRMKKADEDDEVISDWKFAAMVVDRLCLFIFTLFTVLATVVILCRAPHIIVQ 515
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|752872401|ref|XP_011253436.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7 isoform X1 [Camponotus floridanus]) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 326/500 (65.20%), Postives = 385/500 (77.00%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGY-SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 E++CG +EK+LL+ LL YN LERPV NES+ L + FGITLQQIIDV+ WTDYNL WN +EYG V +RI P +LW PD+LMYNSADE FDGT+QTNVVV+H+G CLYVPPGIFKSTCKIDITWFPFDDQHCD+KFGSWTY G +LDL + +GGD+S FI NGEW LIG+PGK++ I Y+CCPEPYVD+TF I IRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVFLN V+ESMP TSDAVPLI +YFNCIM MVASSVVLTV+VLNYHHR+ + + MP+WV+ LFLQW+P +LRM+RPGK IT+KTILM+NRMKELE++E+SSKSLLANVLD+DDDFR + A + GY S +A G P S P T+ + + S +EL ILKEL+FIT+RMK DE++E+I DWKFAAMV+DR CL FT FTV+ T+ +L APHIIV+ Sbjct: 37 ESLCGRHEKRLLNHLLANYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWTDYNLQWNETEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSEEGGDLSDFIMNGEWYLIGMPGKKNTIMYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVVLTVLVLNYHHRSPDRYVMPNWVKILFLQWLPCVLRMSRPGKKITKKTILMSNRMKELELQERSSKSLLANVLDIDDDFRHGNSAANPASGYISRSAYG------------------TPLSTRPATVEETSASLPLSG-MQKELHTILKELQFITSRMKKADEDDEVISDWKFAAMVVDRLCLFIFTLFTVLATVVILCRAPHIIVQ 517 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
Pagesback to top
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:93716..116270+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-1.8 ID=maker-scaffold34_size539781-snap-gene-1.8|Name=nicotinic acetylcholine receptor subunit a6 isoform xii|organism=Tigriopus kingsejongensis|type=gene|length=22555bp|location=Sequence derived from alignment at scaffold34_size539781:93716..116270+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit a6 isoform xii' has the following synonyms
Add to Basket
|