nicotinic acetylcholine receptor subunit a6 isoform xii, maker-scaffold34_size539781-snap-gene-1.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007472 (supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-1 gene:EMLSAG00000007472 transcript:EMLSAT00000007472 description:"maker-LSalAtl2s429-augustus-gene-2.12") HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 279/376 (74.20%), Postives = 305/376 (81.12%), Query Frame = 0 Query: 150 DQHCDLKFGSWTYSGWKLDLAMKDR-DGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAG----GVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSC--------------SATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 Q D+K + + ++LDL +KD GGDISSFI NGEWDLIGVPG R E+FYECCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVT+LLSLTVF+N VS+ MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH+MP WVRT FLQW+PW+LRMNRPGKPITRK+ILMTNR+KELE+KEK+SKSLLANVLDMDDDFRPMSVAG G + G + ASGFMRVNGNPM+ P P PT+ H + +NRELQCILKELKFITNRMK+ DEEEEI+ DWKFAAMVIDRFCLITFTAFTVITT+AVLLSAPHIIVE Sbjct: 52 QQIIDVKLNN-EHRFFQLDLTLKDEGKGGDISSFIPNGEWDLIGVPGTRHELFYECCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHDMPPWVRTAFLQWLPWILRMNRPGKPITRKSILMTNRIKELELKEKTSKSLLANVLDMDDDFRPMSVAGGYGTGANSGSTPGASGFMRVNGNPMDSSGGAPVTDKAPPPPTSSPYPIHGAPSAPPPPPPPGSCTFGTGGSNRELQCILKELKFITNRMKIMDEEEEIMSDWKFAAMVIDRFCLITFTAFTVITTVAVLLSAPHIIVE 426 HSP 2 Score: 71.2478 bits (173), Expect = 1.456e-13 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 22 METICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTD 73 +ETICGY+EK+LL L++ YN L RPVV ES+ L+LTFGITLQQIIDV + Sbjct: 10 IETICGYHEKRLLFALIQNYNQLXRPVVXESEPLMLTFGITLQQIIDVKLNN 61
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10") HSP 1 Score: 403.675 bits (1036), Expect = 2.669e-137 Identity = 219/396 (55.30%), Postives = 262/396 (66.16%), Query Frame = 0 Query: 167 LDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVT-----------------------------ILLSLTVFLNTVSESMPATSDAVPLI------------STYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMS-------------VAGGVSGGY---SMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIV 505 LDL ++ D G S+++ NGEW L+GVPGKR+E+FY+CCPEPY+D+TF I IRRRTLYYFFNLIVPCVLI+SMA+LGFTLPPDSGEKL+L VT ILLSLTVF VSESMPATSDA+PL+ TYFNCIM MVASSVV T+++LNYHHR A+THEMP+WVR +FLQW+PW+LRM RPG+ ITRKTILM N+MKEL++KE+SSKSLLANVLDMDDDFRP S +AGG G S T SGF G P S T+ T +REL ILKE++ IT++++ ++ I DWKFAAMV+DR CLITFT FT+I T+AVL SAPHIIV Sbjct: 71 LDLQTQN-DEGVTSTYVLNGEWALLGVPGKRNEVFYDCCPEPYLDVTFVIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPNWVRCVFLQWIPWVLRMGRPGEKITRKTILMQNKMKELDLKERSSKSLLANVLDMDDDFRPASTLPHIHPHHPSHSLAGGSGTGSTANSSTKSGFRVTPGLHQPPPPPPPPPLGNSTGDVTLGDGM-TSGIPPGIHRELSLILKEIRVITDKIREDEDTAAIENDWKFAAMVLDRLCLITFTMFTIIATVAVLFSAPHIIV 464 HSP 2 Score: 58.9214 bits (141), Expect = 1.303e-9 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDV 69 G +E++LL+DL YN LERPV NES+ L L+FG+TLQQIIDV Sbjct: 28 GPHERRLLNDLXAIYNNLERPVFNESEPLKLSFGLTLQQIIDV 70
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 278.1 bits (710), Expect = 2.784e-87 Identity = 146/337 (43.32%), Postives = 209/337 (62.02%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL--DVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGK 342 K+L DDLL YN L RPVVN SD + + + L Q+IDVN W DY + W EYG VD + + +W PD+++YN+AD F+ T T + + G ++ PP I+ S+C++D+ +FPFD+Q C +KFGSWTY G+++DL ++ + G D+S F + EWD++ VP R+ Y CC EPY+DITFNI +RR+TL+Y NLI+PC+ IS + +L F LP DSGEK + ++ILLSLTVF ++E +P TS VPL+ + M++ S+ +TVVVLN H R+ +TH M WVR +F+ +P LL M RPG+ Sbjct: 24 KRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHQEEEQGTNVVNIGVDLSEFYMSVEWDILAVPAIRNVKVYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKXNVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMAPWVRRVFIHILPRLLVMRRPGQ 360
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 272.707 bits (696), Expect = 1.108e-85 Identity = 142/347 (40.92%), Postives = 214/347 (61.67%), Query Frame = 0 Query: 18 GNTLMETICGYYE-KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRP 340 G ++C + K+L DDLL Y+ L RPV N SD L + G+ L QII ++ W DY L W +YG V + + + +W+PD+++YN+AD ++ T T V+ G ++ PP I+KS+C+ID+ +FPFD+Q C +KFGSWTY G+ +DL ++ G D+ + + EWD++ P R+E +Y CC EPY DI F + +RR++L+Y N+I+PCV IS +++L F LP DSGEK++L ++ILLSLTVF ++E +P+TS AVPL+ Y M++V SV+LT+ VLN + RT TH+M WVR F++++P L + RP Sbjct: 15 GTVYFSSVCANPDAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKGSSSEIEIGMDLQEYYISTEWDVMTAPAVRNEKYYPCCEEPYPDIIFYLTLRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPSTSIAVPLLGKYLLFTMILVTFSVMLTIGVLNVNFRTPATHKMAPWVRKTFVEFLPRFLFIRRP 361
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 262.307 bits (669), Expect = 1.088e-83 Identity = 124/281 (44.13%), Postives = 178/281 (63.35%), Query Frame = 0 Query: 68 DVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDL----AMKDRD----GGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRP 340 D W DY W+ SEYG V + + + +W+PD+++YN+AD + T T ++ +DG ++ PP IFKS+C+ID+ +FPFD Q C LKFGSW++ G+++DL + D D G D+S + N EWD++ VP +R Y CCPEPY DI F+I IRR+ L+Y NLI+PCV I +++L F LP SGEK L + IL+S T++ V E +PATS +PL+ Y M+ +A +V LT ++LN H+R TH MP WVR F+Q +P +L M P Sbjct: 8 DHEWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGFQVDLVHINSQPDNDTVSYGMDLSEYYLNVEWDILEVPAERHVKTYPCCPEPYPDIYFSIIIRRKPLFYVVNLIIPCVGIFYLSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAVTLTTIILNLHYRKPSTHRMPQWVRRTFIQRLPRILLMRVP 288
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 261.922 bits (668), Expect = 2.192e-80 Identity = 140/345 (40.58%), Postives = 222/345 (64.35%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAM-KDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKEL 358 E++L+ DL R YN L RPV N + + + FG+ Q+I+VN W DY L W+ ++YG + +R+ P ++W PD++++N+AD ++ +++NV++ DG L+VPP I++S+C ID+T+FPFD Q C +KFGSWT++G ++ L + ++D D+S + +G WD+I VP + I + P DI+F I IRR+TL+Y NLI+P VLIS + +L F LP ++GEK+TL ++ILLSL VFL VS+ +P TS +PLI+ Y +M S+++TVV++N++ R TH MP+W+R LFL+++P +L M RP K R + M + + + Sbjct: 27 EERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTGDQVSLTLYNNKDYVDLSDYWKSGTWDIIEVPAYLN-IHNDTLPTE-TDISFYITIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVVIINWNFRGPRTHSMPNWIRVLFLKYLPIVLFMRRPKKTRLRWMMEMPGQSRRI 369 HSP 2 Score: 55.8398 bits (133), Expect = 1.555e-8 Identity = 30/96 (31.25%), Postives = 45/96 (46.88%), Query Frame = 0 Query: 408 EQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 E+E Q PP + +S A + E + ++FI ++ DE +I DWKF AMV+D L F T + T+ +L+ APHI Sbjct: 528 EEEDQAQQHPPPPHHRGGRRNSDEDDGSEAFLSPEAYRATQAVEFIAEHLRNEDEYLQIREDWKFVAMVVDXXQLYVFFXVTTVGTVGILMDAPHI 623
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 235.728 bits (600), Expect = 1.294e-73 Identity = 125/333 (37.54%), Postives = 190/333 (57.06%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIH-----PK---------RLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEP-YVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQ 329 G EKK+L+ + YN LERPV + + + L+ G++L++II ++ W D+NL WNRSEY ++ ++I PK +W PD+L+YNSA F+ + N+++S++G Y+PPGI +STC+ EW+++G+P R+E Y+CC + + DIT+ I +RRRTLYY N +PCVLI+SMA+LGF PP+SGEK+TL++TIL+SLT F+N V++ P +S PL+ YF+CIM+M+ASSV+ +++V+NYHHR E +MP W R +F + Sbjct: 20 GQTEKKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQSTCE----------------------------------------------EWEVLGMPAIRTEDIYDCCKDKIFQDITYTIQLRRRTLYYLGNWTLPCVLIASMAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSSKT-PLVGIYFSCIMIMIASSVICSILVINYHHRLTEYGDMPKWFRFIFFK 305
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 196.438 bits (498), Expect = 4.408e-58 Identity = 136/452 (30.09%), Postives = 207/452 (45.80%), Query Frame = 0 Query: 29 YEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEE 465 + K+L DDLL YN L RPV N ++ L + G+ L Q+IDV+ W DY L W EYG V+ + + + +W+PD++++N+AD +++ T T + + G ++ PP I+KS+CKI++ WFPFD+Q CD+KFGSWTY G+++DL D++ G S+ + G I + YY L C+ I LLSLTVF ++E +P TS AVPL+ Y M++V S+ +TV VLN H R+ TH M W+R +F+ MP +L M RP + E +K +S+ L+ N D D + ++ G + T + NG EQ+ P S S A C L+ ++FI +K D++ E Sbjct: 26 HAKRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGFQVDLKHVDQEKG--SNVVKVG-------------------------------IDLKEFYYSVTL---CISI------------------------LLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPATHRMSPWMRKIFIHIMPRMLLMTRPH--------YIPRYSAEPPLKSRSNDDLMYN---QDQDSKKLNGHCGPT-----TNEDQCKKNGKD-EQDSTKPNK---------------KKSISNVA-----CALRGVEFIAQHIKNADKDNE 380
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 194.897 bits (494), Expect = 5.974e-58 Identity = 111/283 (39.22%), Postives = 158/283 (55.83%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLA-MKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVA 297 K+L DDLL YN L RPV+N +D LL+ + L Q+IDVN W DY L W+ EYG V + + +W PD+++YN+AD F+ T T + +G + PP I+KS+C+ID+ +FPFD+Q C +KFGSWTY G+++DL M + DG ++ VP + I + R+TL+Y NLI+PC+ IS + +L F LP DSGEK+TL ++IL SL VF V E +P TS VPL+ Y M++V+ Sbjct: 54 KRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHMCEVDGTNV-------------VP---------------LGIDLSEFYIRKTLFYTVNLIIPCMGISFLTVLTFYLPSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 308
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 187.193 bits (474), Expect = 5.923e-56 Identity = 99/247 (40.08%), Postives = 142/247 (57.49%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGG--------DISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKL 254 K+L DDLL YN L PVVN S+ + + + L Q+IDVN W DY L W+ +E +V + + P+ SAD F+ T T + G + PP I+ S+C++D+ +FPFD+Q C +KFGSWTY G+++DL D G D++ F + EWD++ VP R+ +Y CC EPY+DITFN+ +RR+TL+Y NLI+PC+ IS + +L F LP DSGEK+ Sbjct: 30 KRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE-NHVYNFYLFPR-----------SADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGYQVDLRHIDEVMGKPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYXCCXEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKV 264
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|341940173|sp|Q9R0W9.2|ACHA6_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 298.901 bits (764), Expect = 1.251e-94 Identity = 168/486 (34.57%), Postives = 261/486 (53.70%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELE-MKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLS 499 E++L L YN RPV N SD + + F + + Q+ +V+ W DY L W+ +EY ++++R+ +W PD+++YN+A F +T ++ +DG + PP IFKS+C +DIT+FPFD Q+C LKFGSWTY ++DL + D++ F N EW+++ G + +I Y CC E Y DIT++ +IRR ++Y NLI+PC+ IS + +L F LP D GEK+TL +++LLSLTVFL ++E++P+TS +PL+ Y M+ V S+V+TV VLN H+RT TH MP WV+T+FLQ P +L M +P ++ KE +K+ S + RP V G S ++ + + P +S P + HS +++ +++ ++FI MK +E E+ DWK+ AMV+DR L F V T+ + L Sbjct: 34 EEQLFHRLFAHYNRFIRPVENVSDPVTVHFELAITQLANVDEVNQIMETNLWLRHIWKDYRLRWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIG-SKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTIFLQAFPSILMMRKP-----------LDKTKEAGGVKDPKSHTK-----------RPAKVKFTHRG-----ESKLLKECHHCQKSSDIAPGKRRSSQQPARWVAENSEHS------SDVEDVIESVQFIAENMKSHNETNEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 485
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113050|sp|P23414.1|ACH1_SCHGR (RecName: Full=Acetylcholine receptor subunit alpha-L1; Flags: Precursor) HSP 1 Score: 299.286 bits (765), Expect = 5.391e-94 Identity = 149/335 (44.48%), Postives = 214/335 (63.88%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAM--------KDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGK 342 K+L DDLL YN L RPV N +D +L+ G+ L Q+ID+N W D+ W+ +EYG V + + + +W+PD+++YN+AD + T T V+ H G ++ PP IFKS+C+ID+ +FPFD Q C +KFGSWTY G ++DL K + G D+ + + EWD++GVP +R E +Y CC EPY DI FNI +RR+TL+Y NLIVPCV IS +++L F LP DSGEK+ L ++ILLS T+F +SE +P+TS A+PL+ Y M++V SVV+T++VLN H+R TH+M WVR +F++ +P LL M P + Sbjct: 28 KRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAVLHHTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHINQKYDDNKVKVGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIVPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMVLVGLSVVITIMVLNVHYRKPSTHKMAPWVRKVFIRRLPKLLLMRVPEQ 362
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113053|sp|P09480.1|ACHA2_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 297.745 bits (761), Expect = 8.130e-94 Identity = 182/510 (35.69%), Postives = 269/510 (52.75%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFR-------------------PMSVAGGVSGG----YSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLL 498 G+ E +L L YN RPV N SD +++ FG+++ Q+IDV+ W+DY L WN ++ NV S+R+ + +W+PD+++YN+AD F T T + +G +VPP I+KS+C ID+T+FPFD Q+C +KFGSWTY K+DL + D+ + +GEW +I G+ + Y+CC E Y DITF IRR L+Y NLI+PC+LIS + +L F LP D GEK+TL +++LLSLTVFL ++E +P+TS +PLI Y M+ V S+++TV VLN HHR+ TH MPHWVR+ FL ++P L M RP P+ T + + +S+ L D+DD + P V G S G YS + +G P P P S + S + R L+ + ++I + ++ D + + DWK+ AMVIDR L F ++ T+ + L Sbjct: 31 GFAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENMEHHV-DLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP--PLLLPAEGTTGQYDPPGTRLSTSRCWLET--DVDDKWEEEEEEEEEEEEEEEEEKAYPSRVPSGGSQGTQCHYSCERQA-GKASGGPA----------PQVPLKGEEVGSDQGLTLSPSILRALEGV----QYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 520
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|259016373|sp|Q60S81.3|ACH8_CAEBR (RecName: Full=Neuronal acetylcholine receptor subunit eat-2; Flags: Precursor) HSP 1 Score: 296.204 bits (757), Expect = 9.530e-94 Identity = 170/495 (34.34%), Postives = 266/495 (53.74%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRD-----GGDISSFITNGEWDLIGVPG-KRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 E +LL DL Y+P+ERPV + + + + LQQ++DV+ W DY + W+ EYGN+ S++I LW PD+L++NSA+E FD +F N+VVS+DG L+ PPGI + +C + +TWFP+D+Q C LKFGSWTY G KLDL + D D D+ ++ NGE+DLI P ++S F + E YV++ F++H++RRT+YY N I+P +LIS +LGFT+P + GEK+TL +T LS+ VFL VSE P TS+++P+I+ +F+ ++++ S+ ++++ +N +R + H M W R +FL+W+PW L M+RP D FR ++ G E+ + + Q P + +SQ + L+ ++ LK ++ +EEEE I++W+F AMVIDR L FT TT + + P++ Sbjct: 23 EYRLLKDLREGYDPMERPVSDHMKPVNVKLRLILQQLVDVDEKNQVITLVVWTQYTWNDYKMKWSPEEYGNITSLQIPFGTLWKPDILLFNSANEHFDSSFPVNMVVSNDGNVLFAPPGIMQFSCSLSMTWFPYDEQVCYLKFGSWTY-GKKLDLRIDDADLPEGHKMDLQYYVPNGEFDLISTPAFRKSTTFLD---ETYVELYFHMHLKRRTMYYGLNWIIPSILISLSNILGFTMPVECGEKVTLQITNFLSIMVFLAMVSEVAPPTSESIPIIAAFFSFAIVILGVSICVSLITVNIFYRHPKMHRMGDWTRYIFLEWLPWFLLMSRP-----------------------------------DHVFRKPKREKKKEEEEDEESNA-----GGKEEESELISQK---QQRPRLLVNSQIVMDSTIPY---LEEVIGYLKVFKAKLDDDEEEEEEILNWRFMAMVIDRASLFLFTGLIFGTTFVIFAACPNL 467
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|57012605|sp|Q8R493.1|ACHB4_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit beta-4; Flags: Precursor) HSP 1 Score: 296.59 bits (758), Expect = 1.074e-93 Identity = 176/488 (36.07%), Postives = 268/488 (54.92%), Query Frame = 0 Query: 30 EKKLLDDLLRA--YNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPE--PYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLL 498 E+KL+DDLL YN L RP + S + + ++L Q+I VN WTDY L WN S Y V+ +RI KR+W+PD+++YN+AD ++ + TNV+V +G ++PP I+KS CKI++ FPFD Q+C LKF SWTY ++D+ +K + F +GEWD++ +PG+R+ P+ YVD+T++ I+R+ L+Y NLI+PCVLI+S+A+L F LP D GEK+TL +++LL+LT FL +S+ +P TS +PLI Y M++V S+V TV VLN HHR+ TH M WV+ FL +P L M RPG ++ + ++++ L E +S S L G S ++ + VN P + + P + S S ++LQ L+ + FI ++ D ++ +I DWKF AMV+DR L F ++ T+ + L Sbjct: 26 EEKLMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVLYNNADGTYEVSVYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVLKS-PTAIMDDFTPSGEWDIVALPGRRT-----VNPQDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCVLNVHHRSPSTHTMASWVKECFLHKLPTFLFMKRPGLEVSPARVPHSSQL-HLTTAEATSTSAL-----------------GPSSPSNLYGNSMYFVNPVPATPKSAVSSHTAGLPRDARLRS-------SGRFRQDLQEALEGVSFIAQHLESDDRDQSVIEDWKFVAMVVDRLFLWVFVIVCILGTMGLFL 482
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301372|ref|XP_023332227.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X11 [Eurytemora affinis]) HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0 Identity = 372/490 (75.92%), Postives = 412/490 (84.08%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301368|ref|XP_023332225.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0 Identity = 371/490 (75.71%), Postives = 412/490 (84.08%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301370|ref|XP_023332226.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X10 [Eurytemora affinis]) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 367/490 (74.90%), Postives = 411/490 (83.88%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301366|ref|XP_023332224.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0 Identity = 372/505 (73.66%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301358|ref|XP_023332220.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 372/505 (73.66%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301362|ref|XP_023332222.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301352|ref|XP_023332216.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301356|ref|XP_023332218.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VS MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSAIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301364|ref|XP_023332223.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0 Identity = 367/505 (72.67%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301354|ref|XP_023332217.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0 Identity = 367/505 (72.67%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:93716..116270+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-1.8 ID=maker-scaffold34_size539781-snap-gene-1.8|Name=nicotinic acetylcholine receptor subunit a6 isoform xii|organism=Tigriopus kingsejongensis|type=gene|length=22555bp|location=Sequence derived from alignment at scaffold34_size539781:93716..116270+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit a6 isoform xii' has the following synonyms
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