nicotinic acetylcholine receptor subunit a6 isoform xii, maker-scaffold34_size539781-snap-gene-1.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 158.688 bits (400), Expect = 3.685e-42 Identity = 106/419 (25.30%), Postives = 204/419 (48.69%), Query Frame = 0 Query: 14 APPAGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITL--------QQIIDVN------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSAD-ERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDG--GDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEK------------SSKSLLANVLDMDDDFRPMSVAGG-VSGGYSMTASGFMRV 402 +P + N + T +L + LL Y+ PV N SD ++++ G++L + +DV+ W D L W+ S+Y N+ + +W PD+L YN+A+ E + +T+ +V H G L+VPP K+ C++D+ +P D Q C LKFGSWT ++DLA+ I + + EW ++ ++ + Y P+ Y DITF+ +++R + Y + +I+PC++ M+ F LP +S EKL L+ + ++L + +P S VP++ +++ ++++ +++V+ V+VLN + P ++R +F + L ++ I+ + + ++M E SS L + M++D +G + G + + A+G ++ Sbjct: 247 SPKSPNKKLNTRVFSARHRLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHLDINELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQTCSLKFGSWTSHANQIDLALFKNATVVEKIDFYTKDREWVVLNTTVVKNSVSYVEHPDIYADITFSFNMKRISQSYKYVIILPCLVTMLMSTCSFGLPSNSHEKLFLNGIAFIVCVLYLVYFATILPFQSSTVPILVKFYSNTVVLIGAAIVINVIVLNMTQVRKHVYP-PKFLRIIFAGPLGKCLCLDHXRHQISSTHTRLQVNNELIDMAESXQPPDLSQRRTISSNDGLTRINSMEEDENDYIFSGNDIMGEWILVAAGIEKI 664
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000001199 (supercontig:LSalAtl2s:LSalAtl2s119:5078:7517:-1 gene:EMLSAG00000001199 transcript:EMLSAT00000001199 description:"maker-LSalAtl2s119-snap-gene-0.6") HSP 1 Score: 125.946 bits (315), Expect = 2.133e-32 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 0 Query: 173 DRDGGDISSFITNGEWDLIGVPGKRSEIFYEC--CPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLL 335 + + GD S++ NGE+ L G +R+ + Y C C PY DITF I IRRR L+Y FNLI+PCVLI+ +ALL F +P +SGEK+TL ++ LLS+TVFL T+ ES+ Y+ + +V+ + + V LN HHR +E+P V+ + L + L Sbjct: 6 EGETGDTSNYQANGEFVLEGFQSQRNVVNYTCNGCDAPYPDITFTIIIRRRPLFYVFNLILPCVLINGIALLVFYVPSESGEKVTLGISALLSMTVFLMTIRESL------------YYGVSICLVSFASAMAXVTLNIHHRGIRGNEVPPSVKNIILNQLGKLF 158
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000008789 (supercontig:LSalAtl2s:LSalAtl2s546:116340:118829:1 gene:EMLSAG00000008789 transcript:EMLSAT00000008789 description:"maker-LSalAtl2s546-augustus-gene-1.9") HSP 1 Score: 72.7886 bits (177), Expect = 9.757e-15 Identity = 44/162 (27.16%), Postives = 77/162 (47.53%), Query Frame = 0 Query: 67 IDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSAD-----ERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTL 223 + ++W D L W ++ ++ +R+ +LW PD++ Y D E F N +V +G LYVP + C + C +K+GSWT+ ++L ++ +D DIS F+ + V + YECCPEPY + + + ++R+ L Sbjct: 71 VHMSWMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDITEIQEEF------NAIVYSNGKILYVPDTKLRIDCDNANLTDVWAVNECTIKYGSWTFDNDMMEL-VQFKDPVDISEFVKLCPIKTLDVMKELKLKIYECCPEPYASLDYTLKLQRKFL 225
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000000486 (supercontig:LSalAtl2s:LSalAtl2s1075:141499:142154:-1 gene:EMLSAG00000000486 transcript:EMLSAT00000000486 description:"snap_masked-LSalAtl2s1075-processed-gene-0.7") HSP 1 Score: 63.5438 bits (153), Expect = 6.694e-12 Identity = 37/134 (27.61%), Postives = 66/134 (49.25%), Query Frame = 0 Query: 42 NPLERPVVN-----ESDHLLLTFG---ITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKL 167 NP++R E L L FG + + +I + W D WN ++ ++DS+ + ++W P++++ N+ E+F + +V +G +Y+ S CK + +PF Q C LKFGSW +K+ Sbjct: 52 NPIKRNKTEIDLSLEVTSLDLNFGEGELKVDGLITLRWNDQRYKWNPEDFEDIDSIELPFSKVWSPEVILLNARVEKF--IHRQIGIVKSNGDIIYLLSMHSSSNCKPNFEKYPFGIQTCALKFGSWRNQHYKV 183
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000001191 (supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 gene:EMLSAG00000001191 transcript:EMLSAT00000001191 description:"augustus_masked-LSalAtl2s119-processed-gene-0.1") HSP 1 Score: 60.8474 bits (146), Expect = 1.235e-11 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 0 Query: 25 ICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNS 106 + G YE +L LL Y P PV N S L ++ G++L IIDV+ W D +L WN S++G + ++R+ R+W PD+++YN Sbjct: 9 LGGEYEYRLTKYLLSNYEPSVLPVENSSTPLDVSLGVSLHHIIDVDEKNQIITTNCWITQTWRDTHLTWNASDFGGIRTIRLPFDRVWRPDIILYNK 105
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000009437 (supercontig:LSalAtl2s:LSalAtl2s603:238594:257708:1 gene:EMLSAG00000009437 transcript:EMLSAT00000009437 description:"snap_masked-LSalAtl2s603-processed-gene-2.4") HSP 1 Score: 58.151 bits (139), Expect = 1.957e-10 Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0 Query: 106 SADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKL 167 AD+ ++ +V H+G + PP F+STC +D+ +FPFDDQ C LK GSW + G+ + Sbjct: 30 GADDFSTEYMRSLALVEHNGLVFWPPPTKFRSTCPVDVAFFPFDDQICMLKLGSWIHDGFSI 91
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000003233 (supercontig:LSalAtl2s:LSalAtl2s178:159770:165601:1 gene:EMLSAG00000003233 transcript:EMLSAT00000003233 description:"augustus_masked-LSalAtl2s178-processed-gene-1.1") HSP 1 Score: 58.151 bits (139), Expect = 9.022e-10 Identity = 55/212 (25.94%), Postives = 92/212 (43.40%), Query Frame = 0 Query: 29 YEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQI-------------IDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSAD-ERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWD-----LIGVPGKRSEIFYECCPEPYVDITFNIHIRRR 221 Y +KL +++L+ YNP RP + +TFGI+ + +NW D L WN S V+S+ + +W PD++ + D +D + V V +G L+VP FK C C+++FGSWTY ++L GG S + ++D ++ R E P+ YV + F++ + +R Sbjct: 28 YVQKLTNEVLKDYNPAARPNDLNGNIGNVTFGISPTCLNLRYYGLVFGNIWYKINWYDPRLTWNSSS--GVESLSLPNDLIWKPDIVPFFGRDGTHYDSKYP--VKVFPNGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNLNF---FGGKASVDTSTYDFDFCPTKILQSTATRKVKKIEGYPKSYVSLIFHLKLVKR 232
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000011250 (supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 gene:EMLSAG00000011250 transcript:EMLSAT00000011250 description:"maker-LSalAtl2s76-augustus-gene-0.8") HSP 1 Score: 55.4546 bits (132), Expect = 1.193e-8 Identity = 55/237 (23.21%), Postives = 99/237 (41.77%), Query Frame = 0 Query: 39 RAYNPLERPVVNESDHLLLTFGITLQQIIDVNW--------TDYNLGWNRSEYGNVDS--------VRIHPK---RLWVPDLLMYNSADERFDGTF--QTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPG--KRSEIFYECCP--EPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDS 250 + Y+ E P V LL+ F I L+ ++ V+ T L W + S V +PK W+PD+ + S R F ++ V +D Y F C++D FP D+Q C++KF S+ ++ +L + K + +I+ I+ ++D+ + I+ P +V + IH+RR Y+ +P ++ +A L + P+S Sbjct: 38 KDYSIHEAPRVYADKPLLVNFSINLRNVLSVDEKQQIITLETSLRLYWEDPRIAVLPSALSESRNYVTFNPKVAEYFWIPDIFIDKSKAVRVPTYFVKPASLRVYNDSTVRYSSRLNFDVACEMDFHRFPVDEQLCEIKFESFGFTTEQLMFSWK-KGSSNINQNISLAQFDMNKSLNCLYFTHIYNTSHPFMSIFVGLIMKIHLRREIGYHIVQTYIPSMIFVFVAWLSLFISPES 273
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000002956 (supercontig:LSalAtl2s:LSalAtl2s16:329273:348776:1 gene:EMLSAG00000002956 transcript:EMLSAT00000002956 description:"maker-LSalAtl2s16-augustus-gene-3.6") HSP 1 Score: 48.9062 bits (115), Expect = 4.583e-8 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0 Query: 293 MMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMT 352 M++ S+ +TVVVLN H RT +TH M W+R +F+ +P LL M RP + + ++T Sbjct: 1 MILDTFSICVTVVVLNVHFRTPQTHTMAPWIRRVFIHILPRLLVMRRPHYDLDKHRYVLT 60
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Match: EMLSAG00000006143 (supercontig:LSalAtl2s:LSalAtl2s335:560568:612257:-1 gene:EMLSAG00000006143 transcript:EMLSAT00000006143 description:"maker-LSalAtl2s335-augustus-gene-5.8") HSP 1 Score: 48.9062 bits (115), Expect = 5.280e-7 Identity = 30/130 (23.08%), Postives = 53/130 (40.77%), Query Frame = 0 Query: 374 DMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 D +D+F P+ V + + N N + P PY + + +CS ++ C+ FI + +E ++ DWK+ AMV+DR L FT ++ T ++ AP + Sbjct: 28 DEEDEFNPIDVRSISADDDDLGGLSSPLGNNNXLHSXXTGPPLISPPPYEREVNNPFDHSNCSKNLHKSCACV----NFIAEHTRAKEEATKVKEDWKYVAMVLDRLFLWIFTLAVLVGTAGIIXQAPSL 153
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113067|sp|P22770.1|ACHA7_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 469.159 bits (1206), Expect = 6.553e-161 Identity = 242/505 (47.92%), Postives = 323/505 (63.96%), Query Frame = 0 Query: 23 ETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNR---MKELEMKEKSSKSLL-ANVLDMDDDFRPMSVAGGVSGGYS--MTASGFM--RVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 E++ G +++KL +LL+ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR +W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C+LKFGSWTY GW LDL M++ DIS +I+NGEWDL+G+PGKR+E FYECC EPY DITF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R + +EM S + N+L + FR G+ G + T SG + R+ +P E+E + P+ P +L IL+E+++I NR + DEEE I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 19 ESLQGEFQRKLYKELLKNYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQMQE---ADISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLSSMEMNTVSGQQCSNGNMLYI--GFR------GLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGHPSEGDP------------------DLAKILEEVRYIANRFRDQDEEEAICNEWKFAASVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|2506127|sp|P36544.5|ACHA7_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 463.766 bits (1192), Expect = 6.895e-159 Identity = 237/507 (46.75%), Postives = 315/507 (62.13%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I NGEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + V S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 13 AASLLHVSLQGEFQRKLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|66774011|sp|Q866A2.1|ACHA7_MACMU (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 460.685 bits (1184), Expect = 1.373e-157 Identity = 235/507 (46.35%), Postives = 314/507 (61.93%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I +GEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 13 AASLLHVSLQGEFQRKLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGMHCAPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1703074|sp|P54131.1|ACHA7_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 460.299 bits (1183), Expect = 1.684e-157 Identity = 236/507 (46.55%), Postives = 314/507 (61.93%), Query Frame = 0 Query: 17 AGNTLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 A + L ++ G +++KL DL++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DIS +I NGEWDL+GV GKRSE FYECC EPY D+TF + IRRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + S G RV +P E + P+ P +L IL+E+++I +R + DE E + +WKFAA V+DR CL+ F+ FT++ TI +L+SAP+ + Sbjct: 10 AASILHVSLQGEFQRKLYKDLVKNYNPLERPVANDSLPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMTWTDHYLQWNASEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACQHNERRCSLASVEMSAVAGPPATNGNLLYI--GFRGLDTMHCAPTPDSGVVCG--RVACSPTHDEHLLHAGQPSEGDP------------------DLAKILEEVRYIAHRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTILCTIGILMSAPNFV 491
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|146345356|sp|Q05941.2|ACHA7_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 455.292 bits (1170), Expect = 1.573e-155 Identity = 233/495 (47.07%), Postives = 311/495 (62.83%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKS--LLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 G ++++L +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DISS+I NGEWDL+G+PGKR+E FYECC EPY D+T+ + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + +N + FR + S G R+ +P E M A P+ P +L IL+E+++I NR + DE E I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 23 GEFQRRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCG--RLACSPTHDEHLMHGAHPSDGDP------------------DLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1351851|sp|P49582.1|ACHA7_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 453.751 bits (1166), Expect = 7.528e-155 Identity = 232/495 (46.87%), Postives = 310/495 (62.63%), Query Frame = 0 Query: 27 GYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKS--LLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 G ++++L +L++ YNPLERPV N+S L + F ++L QI+DV+ WTD+ L WN SEY V +VR ++W PD+L+YNSADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD Q C LKFGSW+Y GW LDL M++ DISS+I NGEWDL+G+PGKR+E FYECC EPY D+T+ + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + +N + FR + S G R+ +P E M P+ P +L IL+E+++I NR + DE E I +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 23 GEFQRRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQE---ADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCG--RLACSPTHDEHLMHGTHPSDGDP------------------DLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|1351844|sp|P48180.1|ACH1_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 442.965 bits (1138), Expect = 8.346e-151 Identity = 228/496 (45.97%), Postives = 306/496 (61.69%), Query Frame = 0 Query: 24 TICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 T+ E++L +DL+R YN LERPV N S+ + + + LQQIIDV+ W DYNL W+++EYGN+ VR ++W PD+L+YNS D FD T+QTN++V G +VPPGIFK +CKIDI WFPFD+Q C KFGSWTY G+KLDL G DIS +I+NGEW L +R+E FY+CCPEPY D+ F +H+RRRTLYY FNLI+PC+L + M LLGFTLPPD+GEK+TL +T+LLS+ FL+ VSE P TS+AVPL+ +F C M++V +S V TV VLN H+RT ETH+M W R L L W+PW+LRM RPG +T ++ K + S+SL+ N+ D+ +S A + + N + +P +S TT S Q T L I ELK +T RM GD+EE+ +WKFAAMV+DR CL FT F +++TI + SAP+++ Sbjct: 17 TLGSLQERRLYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL-QPATGGFDISEYISNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFSTK----PNRHSESLIRNI---KDNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSLGSIPSTMISSNGTTTDVSQQATLLI-------LHRIYHELKIVTKRMIEGDKEEQACNNWKFAAMVVDRLCLYVFTIFIIVSTIGIFWSAPYLV 497
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|224487629|sp|A8WQK3.2|ACH1_CAEBR (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 435.647 bits (1119), Expect = 7.035e-148 Identity = 228/502 (45.42%), Postives = 302/502 (60.16%), Query Frame = 0 Query: 30 EKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTI-----LMTNRMKE---LEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRE---LQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIV 505 E++L +DL+R YN LERPV N S+ + + + LQQIIDV+ W DYNL W+++EYGN+ VR ++W PD+L+YNS D FD T+QTN++V G +VPPGIFK +CKIDI WFPFD+Q C KFGSWTY G+KLDL G DIS ++ NGEW L +R+E FY+CCPEPY D+ F +H+RRRTLYY FNLI+PC+L + M LLGFTLPPD+GEK+TL +T+LLS+ FL+ VSE P TS+AVPL+ +F C M++V +S V TV VLN H+RT ETH+M W R L L W+PW+LRM RPG +T ++ NR E +K+ AN D D + VS G +T+ G + P+TM SS + + L I ELK +T RM GD+EE+ +WKFAAMV+DR CL FT F + +TI + SAP+++ Sbjct: 23 ERRLYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWKDYNLVWDQAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSSGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL-QPATGGFDISEYLPNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFASKPNRHSESLIRNIKDNEHSLSRANSFDADCRLNQYIMTQSVSNG--LTSMGSI----------------------PSTMISSTNGALTDVSQQATLLILHRIYHELKIVTKRMIEGDKEEQASNNWKFAAMVVDRLCLYVFTIFIIASTIGIFWSAPYLVA 499
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|91208254|sp|Q494W8.1|CRFM7_HUMAN (RecName: Full=CHRNA7-FAM7A fusion protein; AltName: Full=CHRNA7-DR1; AltName: Full=D-10) HSP 1 Score: 385.956 bits (990), Expect = 1.391e-129 Identity = 195/402 (48.51%), Postives = 252/402 (62.69%), Query Frame = 0 Query: 107 ADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSS----KSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHII 504 ADERFD TF TNV+V+ G C Y+PPGIFKS+C ID+ WFPFD QHC LKFGSW+Y GW LDL M++ DIS +I NGEWDL+G+PGKRSE FYECC EPY D+TF + +RRRTLYY NL++PCVLIS++ALL F LP DSGEK++L +T+LLSLTVF+ V+E MPATSD+VPLI+ YF M++V SVV+TV+VL YHH + +MP W R + L W W LRM RPG+ R R L E S+ + N+L + FR + V S G M + E + Q P P +L IL+E+++I NR + DE E + +WKFAA V+DR CL+ F+ FT+I TI +L+SAP+ + Sbjct: 28 ADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQE---ADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYI--GFRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDP--------------------DLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 404
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor) HSP 1 Score: 325.479 bits (833), Expect = 6.762e-104 Identity = 188/510 (36.86%), Postives = 286/510 (56.08%), Query Frame = 0 Query: 31 KKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLA----MKDRD-----GGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMK-ELEMKEKSSKSLLANVLDMD------DDFRPMS---VAGGVSGGYSMTASGFMRVNGNPMEQEKYMPQAPPTSPYPTTMASSQHTHSCSATANR---ELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHI 503 K+L DDLL YN L RPV N +D +L+ G+ L Q+ID+N W D+ W+ SEYG V + + + +W+PD+++YN+AD + T T ++ + G ++ PP IFKS+C+ID+ +FPFD Q C +KFGSWTY G ++DL D+D G D+ + + EWD++GVP +R E +Y CC EPY DI FNI +RR+TL+Y NLI+PCV IS +++L F LP DSGEK+ L ++ILLS T+F +SE +P+TS A+PL+ Y M++V SVV+T+++LN H+R TH+M W+R+ F++ +P LL M P K + R L N++ L+ + L + + M+ D R M AGG +G + TA+ R +G + + P+ ++ + S A + EL+ + + FI + M+ DE DW F AMV+DR L F +++ T +L AP + Sbjct: 46 KRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVP-KDLLRD--LAANKINYGLKFSKTKFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATN--RFSGLVGALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSL 550
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301372|ref|XP_023332227.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X11 [Eurytemora affinis]) HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0 Identity = 372/490 (75.92%), Postives = 412/490 (84.08%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301368|ref|XP_023332225.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0 Identity = 371/490 (75.71%), Postives = 412/490 (84.08%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301370|ref|XP_023332226.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X10 [Eurytemora affinis]) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 367/490 (74.90%), Postives = 411/490 (83.88%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVNWTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 481
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301366|ref|XP_023332224.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0 Identity = 372/505 (73.66%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301358|ref|XP_023332220.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 372/505 (73.66%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSEIMPITSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301362|ref|XP_023332222.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301352|ref|XP_023332216.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 413/505 (81.78%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF++ VSE MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMSMVSEIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301356|ref|XP_023332218.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 371/505 (73.47%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF+N VS MP TSDAVPLI TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFMNMVSAIMPNTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301364|ref|XP_023332223.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0 Identity = 367/505 (72.67%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQVLTSTLWLNVEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Match: gi|1325301354|ref|XP_023332217.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0 Identity = 367/505 (72.67%), Postives = 412/505 (81.58%), Query Frame = 0 Query: 20 TLMETICGYYEKKLLDDLLRAYNPLERPVVNESDHLLLTFGITLQQIIDVN---------------WTDYNLGWNRSEYGNVDSVRIHPKRLWVPDLLMYNSADERFDGTFQTNVVVSHDGGCLYVPPGIFKSTCKIDITWFPFDDQHCDLKFGSWTYSGWKLDLAMKDRDGGDISSFITNGEWDLIGVPGKRSEIFYECCPEPYVDITFNIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTILLSLTVFLNTVSESMPATSDAVPLISTYFNCIMMMVASSVVLTVVVLNYHHRTAETHEMPHWVRTLFLQWMPWLLRMNRPGKPITRKTILMTNRMKELEMKEKSSKSLLANVLDMDDDFRPMSVAGGVSGGYSMTASGFMRVNGNPMEQ---EKYMPQAPPTSPYPTTMASSQHTHSCSATANRELQCILKELKFITNRMKVGDEEEEIIMDWKFAAMVIDRFCLITFTAFTVITTIAVLLSAPHIIVE 506 T ++I G EK+LL +L+ Y+ L RPV+NES+ LLLTFG+TLQQIIDV+ W DY L WN+SE+ VDSVRIHPK LW PDLLMYNSADE+FDGTFQTNVVVS DG CLYVPPGIFKSTCKIDITWFPFDDQ CDLKFGSWTYSGWKLDL +K DGGDISSFI NGEWDLIGVPGK++ + Y+CCPEPYVDITF IHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTL VTILLSLTVF N V+E++P SDA+PL+ TYFNCIMMMVASSVVLTVVVLNYHHRTAETH MP WVR++FLQW+PW+LRMNRP K ITRKTI+M NRMKELEMKEK+SKSLLANVLD+DDDFRP+SV G GFMRVNGNPME + PP +P P SC+++ RELQCILKE++++TNR+++ D+EEEI+ DWKFAAMVIDRFCLITFT FTVITTIAVLLSAPHIIVE Sbjct: 13 TFKDSIGGPQEKRLLKNLMTDYSTLNRPVLNESEALLLTFGVTLQQIIDVDEKNQLLITCLWLNLEWEDYQLKWNKSEFDGVDSVRIHPKFLWTPDLLMYNSADEQFDGTFQTNVVVSSDGKCLYVPPGIFKSTCKIDITWFPFDDQLCDLKFGSWTYSGWKLDLQLKQDDGGDISSFIKNGEWDLIGVPGKKNSVTYDCCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFHNIVAEALPRVSDAMPLLGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHVMPMWVRSVFLQWLPWVLRMNRPKKKITRKTIMMNNRMKELEMKEKASKSLLANVLDIDDDFRPLSVGG-----------GFMRVNGNPMENNVGHNHNHVQPPATPLPQG--------SCASS--RELQCILKEIRYMTNRLRMRDDEEEIVSDWKFAAMVIDRFCLITFTTFTVITTIAVLLSAPHIIVE 496 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit a6 isoform xii vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:93716..116270+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-1.8 ID=maker-scaffold34_size539781-snap-gene-1.8|Name=nicotinic acetylcholine receptor subunit a6 isoform xii|organism=Tigriopus kingsejongensis|type=gene|length=22555bp|location=Sequence derived from alignment at scaffold34_size539781:93716..116270+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit a6 isoform xii' has the following synonyms
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