protein lingerer-like, maker-scaffold34_size539781-snap-gene-2.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of protein lingerer-like vs. L. salmonis genes
Match: EMLSAG00000001222 (supercontig:LSalAtl2s:LSalAtl2s11:358805:362882:-1 gene:EMLSAG00000001222 transcript:EMLSAT00000001222 description:"maker-LSalAtl2s11-snap-gene-3.11") HSP 1 Score: 197.978 bits (502), Expect = 2.441e-52 Identity = 163/391 (41.69%), Postives = 207/391 (52.94%), Query Frame = 0 Query: 290 FSGSIDTWNPSGGGGGGGGGGGSGGGSTSGAPAPTGPAKAGGTGGGGGSNKDAFDNAGNWGDDFPVAEDWVNEEYTGSLADTKVFTASSANAKGPSKRAPAASGQGPSAVGQSRSFSAA-----------LESSGSHPPAPSVTAPAPVGSGGSSYPQAIDLTTLLQKPTTQSSISSTQPSLLQYPHQPATDSLKAAVGIGSSQS----------GSGP-------DLNNYSSYQNPGGNNYAGASGSGSAFSSIKPASNGDLMSQQQRQPPPKGGPQGPGAARSRVPPPSKIPSSAVEMPGESLTRLDVQFGGMELQFGSGGNPGAQQAVNAASDAFEFNGSSLD--------ESSKYLAG--DKSAKGPHDYIGAPSAKEVNKTLSNAI 642 FSGSIDTWNPSG ++ + +NKDAFDNAGNWGDDFP AEDW NEEYTGSLADTKVFTA S G SK P+AVGQ+R SAA ++S + + S+Y Q+IDL+TLLQKP TQSS+++ P++LQ+ Q A+DSLK+ VG+ S+ S GS P DL SS Q GG +Y+ SG+ + SN +SR+PPPSKIPSSAVEMPG+SLT+LDVQFGG++LQFG+ + G +V+ + F+F G+S ESSKYL G DKS + APSAKEV K+L++ I Sbjct: 67 FSGSIDTWNPSGEN-----------------------SEQTTSKKSRNNNKDAFDNAGNWGDDFPAAEDWDNEEYTGSLADTKVFTAKST---GGSKM--------PTAVGQNRGPSAAQTSQHSPQQXQSQTSQGSSSNAASSXQQQQPQQPSTYSQSIDLSTLLQKPATQSSLTNP-PNILQF-QQHASDSLKSVVGLSSTSSQSVATSSQAQGSTPGNTSTKGDLYYGSSNQQSGG-SYSALIKSGTVGNKSHVISN-----------------------KSRLPPPSKIPSSAVEMPGDSLTKLDVQFGGLDLQFGAPTSTG-DSSVSGTNGGFDFGGTSNTSGSSSATGESSKYLGGGSDKSKLDVYS-SSAPSAKEVTKSLASKI 395
BLAST of protein lingerer-like vs. SwissProt
Match: gi|81879516|sp|Q91VX2.1|UBAP2_MOUSE (RecName: Full=Ubiquitin-associated protein 2; Short=UBAP-2; AltName: Full=Protein lingerer homolog 1; Short=mLig-1) HSP 1 Score: 90.8929 bits (224), Expect = 3.522e-17 Identity = 91/305 (29.84%), Postives = 136/305 (44.59%), Query Frame = 0 Query: 82 IQPTSEQMMIAQIIRDNAD-DIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEET-GKKKKKKQPVEENKDDWDESGAHERGDRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAAGSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNTFQANGQNGAGTGSGTASSATGTGFSGSIDTWNPSGGGGGGGGGGGSGGGSTSGAPAPTGPAKAGGTGGGGGSNKDAFDNAGNWGDDFPVAEDWVNEEYTGSLADTKVFTASSANAK 382 +Q T+EQM +AQ+I D D D EA K++Q++++TG+ +DE AL D D N+AI +LLEG ++WE GKKK + ENK++ ++ E ASR +G + GRGG+R +F+ + N +GD+P RG R G G G G F A G + + S + G + W + G G G + S S P +K ++ G W + E+W E++T L++TKVFTASSA A+ Sbjct: 32 VQATAEQMRLAQVIFDKNDSDFEA---KVKQLMEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGGKKKNFGRESSENKENREKRTERE----ASRGRGTNNRK------GRGGNR------------VREFKGE----------ENGIDCSQGDKPAERGKRARGRGFGRGRGRGTGRFSAQSM-GTFNPADYSESMSTDGCGTKLAVWEAAQNGTDEGPEGLAKSHSMSQEPP----------------SKSSYGLKGAWKNS---VEEWTTEDWTEDLSETKVFTASSAPAE 281
BLAST of protein lingerer-like vs. SwissProt
Match: gi|74745207|sp|Q5T6F2.1|UBAP2_HUMAN (RecName: Full=Ubiquitin-associated protein 2; Short=UBAP-2) HSP 1 Score: 77.7962 bits (190), Expect = 3.242e-13 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 82 IQPTSEQMMIAQIIRDNAD-DIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKKKK-KQPVEENKDDWDESGAHE 176 +Q T+EQM +AQ+I D D D EA K++Q++++TG+ +DE AL D D N+AI +LLEG ++WE G KKK + ENK++ ++ E Sbjct: 32 VQATAEQMRLAQVIFDKNDSDFEA---KVKQLMEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGCKKKNFAKENSENKENREKKSEKE 127
BLAST of protein lingerer-like vs. SwissProt
Match: gi|109940042|sp|Q14157.2|UBP2L_HUMAN (RecName: Full=Ubiquitin-associated protein 2-like; AltName: Full=Protein NICE-4) HSP 1 Score: 76.6406 bits (187), Expect = 7.493e-13 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 Query: 83 QPTSEQMMIAQIIRDNAD-DIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKK 156 Q T+EQ+ +AQ+I D+ D D E +K++Q+IDITG+ +DE AL D D NRAI +LLEG +WE GKKK Sbjct: 30 QATAEQIRLAQMISDHNDADFE---EKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKK 103
BLAST of protein lingerer-like vs. SwissProt
Match: gi|81895299|sp|Q80X50.1|UBP2L_MOUSE (RecName: Full=Ubiquitin-associated protein 2-like) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-13 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 Query: 83 QPTSEQMMIAQIIRDNAD-DIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKK 156 Q T+EQ+ +AQ+I D+ D D E +K++Q+IDITG+ +DE AL D D NRAI +LLEG +WE GKKK Sbjct: 30 QATAEQIRLAQMISDHNDADFE---EKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKK 103
BLAST of protein lingerer-like vs. SwissProt
Match: gi|122117218|sp|Q16VD3.1|LIG_AEDAE (RecName: Full=Protein lingerer) HSP 1 Score: 62.7734 bits (151), Expect = 1.395e-8 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 539 QGPGA--ARSRVPPPSKIPSSAVEMPGESLTR---LDVQFGGMELQFGSGGNPGAQQAVNAASDAFEFNGSSLDESSKYLAGDKSAKGP-----HDYIGAPSA 631 Q P A R+RVPPPSKIPSSAVEMPG+SL LDVQFGG++ G ++ +FN +SL++S+ SA P +DY PS Sbjct: 525 QAPTARRQRARVPPPSKIPSSAVEMPGDSLNNIGYLDVQFGGLDF--------GTDDTFDSVPVTDKFNTNSLEQSTPSSVQLPSAVQPTQSEVNDYQSKPSV 619
BLAST of protein lingerer-like vs. nr
Match: gi|1028711276|ref|XP_016660500.1| (PREDICTED: protein lingerer isoform X4 [Acyrthosiphon pisum]) HSP 1 Score: 106.301 bits (264), Expect = 1.573e-19 Identity = 111/334 (33.23%), Postives = 137/334 (41.02%), Query Frame = 0 Query: 71 HEKREYPAPPKIQPTSEQMMIAQIIRDNADDIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGGISAWEETGKKKKKKQPV--EENKDD------------WDES-------GAHERG---DRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAAGSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNT--FQANGQNGAGTGSGTASSATGTGFSGSIDTW-NPSGGGGGGGGGGGSGGGSTSGAPAPTGPAKAGGTGGGGGSNKDAFDNAGNWGDDFPVAEDWVNEEYTGSLADTKVFTAS 377 HEK K+QPT+EQ+ IA+II D E KI+QV+ IT + EDEV AL D D I+ LLEG +W TGKKKK + ++ KDD WDE+ A G +R R +G P GG R G + + + + + E G + NFR RG RRG G R G SR T FQ + G+ +GFS IDTW NP+ S K+ NWG FP EDW NEEYTGSLADTKVFT S Sbjct: 39 HEKE------KLQPTAEQLRIAKIIDLKPD--EEINNKIKQVMQITQKTEDEVVIALHDNALDIALTIDALLEGPQESWSTTGKKKKNRASSVNKKEKDDLMKNGEADGDAEWDETITQAASITAQNNGGFSERRGRGRGGRGGFTNRPRPTEGGQRFG-ESRKWRERENKENEKNLAEDGASGDNRNFRSDSRGS---RRGMNGPRYNGR-----SRGTRMFQ-----NSERGNSGPGGGNNSGFSQPIDTWFNPTAKE----------------------------------SKKE------NWGT-FPSPEDWDNEEYTGSLADTKVFTPS 309
BLAST of protein lingerer-like vs. nr
Match: gi|641666744|ref|XP_008183838.1| (PREDICTED: protein lingerer isoform X3 [Acyrthosiphon pisum]) HSP 1 Score: 106.301 bits (264), Expect = 1.805e-19 Identity = 111/334 (33.23%), Postives = 137/334 (41.02%), Query Frame = 0 Query: 71 HEKREYPAPPKIQPTSEQMMIAQIIRDNADDIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGGISAWEETGKKKKKKQPV--EENKDD------------WDES-------GAHERG---DRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAAGSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNT--FQANGQNGAGTGSGTASSATGTGFSGSIDTW-NPSGGGGGGGGGGGSGGGSTSGAPAPTGPAKAGGTGGGGGSNKDAFDNAGNWGDDFPVAEDWVNEEYTGSLADTKVFTAS 377 HEK K+QPT+EQ+ IA+II D E KI+QV+ IT + EDEV AL D D I+ LLEG +W TGKKKK + ++ KDD WDE+ A G +R R +G P GG R G + + + + + E G + NFR RG RRG G R G SR T FQ + G+ +GFS IDTW NP+ S K+ NWG FP EDW NEEYTGSLADTKVFT S Sbjct: 39 HEKE------KLQPTAEQLRIAKIIDLKPD--EEINNKIKQVMQITQKTEDEVVIALHDNALDIALTIDALLEGPQESWSTTGKKKKNRASSVNKKEKDDLMKNGEADGDAEWDETITQAASITAQNNGGFSERRGRGRGGRGGFTNRPRPTEGGQRFG-ESRKWRERENKENEKNLAEDGASGDNRNFRSDSRGS---RRGMNGPRYNGR-----SRGTRMFQ-----NSERGNSGPGGGNNSGFSQPIDTWFNPTAKE----------------------------------SKKE------NWGT-FPSPEDWDNEEYTGSLADTKVFTPS 309
BLAST of protein lingerer-like vs. nr
Match: gi|1110926146|ref|XP_019206452.1| (PREDICTED: ubiquitin-associated protein 2-like isoform X4 [Oreochromis niloticus]) HSP 1 Score: 103.99 bits (258), Expect = 8.871e-19 Identity = 106/309 (34.30%), Postives = 143/309 (46.28%), Query Frame = 0 Query: 83 QPTSEQMMIAQIIRDNADDIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKK----KKKQPVEENKDDWDESGAHERGDRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAA--GSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNTFQANGQNGAGTGSGTASSATGTGFSGSIDTWNPSGGGGGGGGGGGSGGGST---SGAPAPTGPAKAGGTGGGGGSNKDAFDNA-GNWGDDFPVAEDWVNEEYTGSLADTKVFTASSA 379 Q T+EQ+ +AQ+I D+ DD E +K++Q+IDITG+++DE AL D D NRAI +LLEG +WE GKKK +K+ E D+ E+ E+G K R R G P GRG SRG G Q + L+GG A RG R + G GR GG R + Q GQN G A GS T+NP+ GGGST +G+ A+ + G G + FD+A G W E+W E++ L++TK+FTASS Sbjct: 32 QATAEQIRLAQMISDHNDDFE---EKVKQLIDITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETSQAETGDEGKEN--REKGGE----KDAARRRGGAPRKGRGASRGREFRG----------QENGLDGGKAGVAGRGAERGRRGRGRGRGAVGASGRRGG-------RFSAQGMGQNDKGPRYDIA---------GSRRTFNPADYAEPAQTEENYGGGSTWNNTGSVELEEGARLEYSAGEGTNYPPKFDSAPGAWRS---ATEEWGTEDWNEDLSETKIFTASSV 302
BLAST of protein lingerer-like vs. nr
Match: gi|1110926137|ref|XP_019206448.1| (PREDICTED: ubiquitin-associated protein 2-like isoform X1 [Oreochromis niloticus] >gi|1110926139|ref|XP_019206449.1| PREDICTED: ubiquitin-associated protein 2-like isoform X1 [Oreochromis niloticus] >gi|1110926141|ref|XP_019206450.1| PREDICTED: ubiquitin-associated protein 2-like isoform X1 [Oreochromis niloticus]) HSP 1 Score: 103.605 bits (257), Expect = 1.317e-18 Identity = 106/309 (34.30%), Postives = 143/309 (46.28%), Query Frame = 0 Query: 83 QPTSEQMMIAQIIRDNADDIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKK----KKKQPVEENKDDWDESGAHERGDRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAA--GSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNTFQANGQNGAGTGSGTASSATGTGFSGSIDTWNPSGGGGGGGGGGGSGGGST---SGAPAPTGPAKAGGTGGGGGSNKDAFDNA-GNWGDDFPVAEDWVNEEYTGSLADTKVFTASSA 379 Q T+EQ+ +AQ+I D+ DD E +K++Q+IDITG+++DE AL D D NRAI +LLEG +WE GKKK +K+ E D+ E+ E+G K R R G P GRG SRG G Q + L+GG A RG R + G GR GG R + Q GQN G A GS T+NP+ GGGST +G+ A+ + G G + FD+A G W E+W E++ L++TK+FTASS Sbjct: 32 QATAEQIRLAQMISDHNDDFE---EKVKQLIDITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETSQAETGDEGKEN--REKGGE----KDAARRRGGAPRKGRGASRGREFRG----------QENGLDGGKAGVAGRGAERGRRGRGRGRGAVGASGRRGG-------RFSAQGMGQNDKGPRYDIA---------GSRRTFNPADYAEPAQTEENYGGGSTWNNTGSVELEEGARLEYSAGEGTNYPPKFDSAPGAWRS---ATEEWGTEDWNEDLSETKIFTASSV 302
BLAST of protein lingerer-like vs. nr
Match: gi|542239503|ref|XP_005457306.1| (PREDICTED: ubiquitin-associated protein 2-like isoform X2 [Oreochromis niloticus]) HSP 1 Score: 103.219 bits (256), Expect = 1.735e-18 Identity = 106/309 (34.30%), Postives = 143/309 (46.28%), Query Frame = 0 Query: 83 QPTSEQMMIAQIIRDNADDIEAQKKKIQQVIDITGREEDEVATALFDAGWDQNRAIELLLEGG--ISAWEETGKKK----KKKQPVEENKDDWDESGAHERGDRASRPKGPPRLRRGGPGGGRGGSRGGPGGGQGGPSGSSDFQSDSLEGGPAAA--GSNFRGGRRGDQPPRRGGRGGRGGGGTGSGPSRNTFQANGQNGAGTGSGTASSATGTGFSGSIDTWNPSGGGGGGGGGGGSGGGST---SGAPAPTGPAKAGGTGGGGGSNKDAFDNA-GNWGDDFPVAEDWVNEEYTGSLADTKVFTASSA 379 Q T+EQ+ +AQ+I D+ DD E +K++Q+IDITG+++DE AL D D NRAI +LLEG +WE GKKK +K+ E D+ E+ E+G K R R G P GRG SRG G Q + L+GG A RG R + G GR GG R + Q GQN G A GS T+NP+ GGGST +G+ A+ + G G + FD+A G W E+W E++ L++TK+FTASS Sbjct: 32 QATAEQIRLAQMISDHNDDFE---EKVKQLIDITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETSQAETGDEGKEN--REKGGE----KDAARRRGGAPRKGRGASRGREFRG----------QENGLDGGKAGVAGRGAERGRRGRGRGRGAVGASGRRGG-------RFSAQGMGQNDKGPRYDIA---------GSRRTFNPADYAEPAQTEENYGGGSTWNNTGSVELEEGARLEYSAGEGTNYPPKFDSAPGAWRS---ATEEWGTEDWNEDLSETKIFTASSV 302 The following BLAST results are available for this feature:
BLAST of protein lingerer-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of protein lingerer-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of protein lingerer-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:229796..236840- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-2.9 ID=maker-scaffold34_size539781-snap-gene-2.9|Name=protein lingerer-like|organism=Tigriopus kingsejongensis|type=gene|length=7045bp|location=Sequence derived from alignment at scaffold34_size539781:229796..236840- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'protein lingerer-like' has the following synonyms
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