AGAP010222-PA, maker-scaffold34_size539781-snap-gene-4.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000010866 (supercontig:LSalAtl2s:LSalAtl2s723:183342:238904:1 gene:EMLSAG00000010866 transcript:EMLSAT00000010866 description:"maker-LSalAtl2s723-augustus-gene-2.10") HSP 1 Score: 114.005 bits (284), Expect = 6.026e-31 Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 0 Query: 35 PKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 P FT + NV+ GR+A L C +++ +K+AW+RV+TQTILT++ N+I+RN R S+ H+ + WRL + V+ D+GWYMCQ+NTDPM S G+L+V+ P Sbjct: 78 PGFTADVGNVTVTAGRNAQLTCKVENLGNYKVAWVRVDTQTILTIHHNIITRNQRVSLSHHD-HKIWRLHLNRVEEQDRGWYMCQINTDPMRSKRGYLQVVVAP 180
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000003152 (supercontig:LSalAtl2s:LSalAtl2s175:708697:736864:1 gene:EMLSAG00000003152 transcript:EMLSAT00000003152 description:"maker-LSalAtl2s175-augustus-gene-7.4") HSP 1 Score: 92.8189 bits (229), Expect = 3.102e-23 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0 Query: 30 IAKDFPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 + PKF ++N++ GRDAS C + + G ++AWI+ + + IL ++++VI+ N R + HN D W L IK VK D G YMCQVN+ PM+S LEV+ P Sbjct: 17 VVDSMPKFIGKLENMTVSEGRDASFTCTVTNLGGHRVAWIKSDDKAILAIHDHVITNNERLHVTHNDKD-TWTLQIKNVKQKDTGEYMCQVNSVPMVSQIAALEVVVPP 124
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000006478 (supercontig:LSalAtl2s:LSalAtl2s354:143581:200786:1 gene:EMLSAG00000006478 transcript:EMLSAT00000006478 description:"augustus_masked-LSalAtl2s354-processed-gene-2.4") HSP 1 Score: 85.1149 bits (209), Expect = 3.334e-21 Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 9 SILLGLLVLESTWASKSDNHVIAKD----FPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 S L L + A +S+++ + +D P+F IQN+S +GRDAS C + F++ W++ +T+ I +++ VI+ N R + + + L+IK +K D G YMCQ+NTDPM+S L V+ P Sbjct: 35 SSLTAALESDGRQALRSNSNEMIEDKGLKLPQFNGHIQNISVAVGRDASFVCNVKALGKFRVGWVKSDTKAIQAIHDTVITYNPRVEVSGD-FKSTFILTIKTIKEEDAGDYMCQINTDPMLSQGATLNVMVPP 167
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000010872 (supercontig:LSalAtl2s:LSalAtl2s723:98293:163912:1 gene:EMLSAG00000010872 transcript:EMLSAT00000010872 description:"maker-LSalAtl2s723-augustus-gene-1.5") HSP 1 Score: 78.5666 bits (192), Expect = 2.480e-18 Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 0 Query: 34 FPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQG 114 P F + + NV+ IG++A L C +D+ +K+AW+RV+TQTILT++ NVI+RN R S+ + +W L I+ V+P+D+G Sbjct: 28 LPYFPEKVVNVTVTIGKNAVLKCKVDNLNNYKVAWVRVDTQTILTIHNNVITRNPRISLSRPTSN-QWFLHIQRVQPTDRG 107
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000000615 (supercontig:LSalAtl2s:LSalAtl2s109:574200:581730:-1 gene:EMLSAG00000000615 transcript:EMLSAT00000000615 description:"maker-LSalAtl2s109-augustus-gene-6.22") HSP 1 Score: 71.633 bits (174), Expect = 7.749e-16 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0 Query: 41 IQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDRE-WRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 +QN +A +G D + C + H +++AW+ + L ++ +VI+ N+R S+ H+ +RE + L +K VK SD G Y+CQ+NT P +S G L V+ P Sbjct: 12 LQNFTARVGNDVTFGCSVKHLGSYRVAWL-XSVKGTLAVHPHVITHNNRISVSHD--NRETYFLQLKNVKESDAGNYICQLNTGPPISIRGALHVVVPP 107
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000005941 (supercontig:LSalAtl2s:LSalAtl2s320:233500:240119:1 gene:EMLSAG00000005941 transcript:EMLSAT00000005941 description:"snap-LSalAtl2s320-processed-gene-2.41") HSP 1 Score: 67.781 bits (164), Expect = 9.091e-16 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0 Query: 49 GRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLG 136 GRD + + Q + WI+ QTILT+++ VI+ N R + H+ R W L I++V+ SD+G YMCQ+NT M G + VLG Sbjct: 19 GRDKEKDKEKEMYQEPVVGWIKAGDQTILTLHKRVITHNSRIHVTHDE-HRTWNLHIRQVQESDKGCYMCQINTAIMKKQLGCINVLG 105
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000003423 (supercontig:LSalAtl2s:LSalAtl2s188:230157:231297:-1 gene:EMLSAG00000003423 transcript:EMLSAT00000003423 description:"augustus_masked-LSalAtl2s188-processed-gene-3.2") HSP 1 Score: 68.1662 bits (165), Expect = 1.098e-14 Identity = 34/106 (32.08%), Postives = 57/106 (53.77%), Query Frame = 0 Query: 43 NVSAVIGRDASLNCFIDH-AQGFKIAWIRVETQTILTMNENVISRNHRFSIDH--NVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTPSDYWSMG 145 N++ +G A L C +D+ + +++W+R ++L++ + S + RFS+ H + W L IK+V D GWY CQVNT+P +S +L V+ W G Sbjct: 43 NITVSVGEAAHLPCLVDNLGEHTQVSWLRGRDTSVLSVGLHTFSSDSRFSVLHVPQLKGTYWNLEIKDVSIRDGGWYDCQVNTEPKVSNKTYLNVIKDRKKSWIQG 148
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000004676 (supercontig:LSalAtl2s:LSalAtl2s244:183507:188860:-1 gene:EMLSAG00000004676 transcript:EMLSAT00000004676 description:"maker-LSalAtl2s244-augustus-gene-1.13") HSP 1 Score: 67.781 bits (164), Expect = 2.901e-14 Identity = 33/107 (30.84%), Postives = 59/107 (55.14%), Query Frame = 0 Query: 34 FPKFTQP-IQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTPS 139 FP F + ++ +S +G++A L+C I + ++W+R ILT+ + + RF + RE+ L IK V+ D+GWY CQ+++ P++ FL+V+ S Sbjct: 902 FPSFDEKSLKKISVPLGQNALLSCKIQDRLNYTLSWLRTSDLHILTVESYTFTSDERFRGIYQPGIREYLLQIKHVRKEDRGWYECQMSSKPILRLQLFLDVINDES 1008
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000006529 (supercontig:LSalAtl2s:LSalAtl2s357:315785:319090:1 gene:EMLSAG00000006529 transcript:EMLSAT00000006529 description:"snap-LSalAtl2s357-processed-gene-3.33") HSP 1 Score: 62.003 bits (149), Expect = 5.617e-14 Identity = 27/71 (38.03%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 64 FKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDRE-WRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLE 133 F++AW+R +++ IL ++ ++++ N R S+ HN W L IK ++ +D G YMCQ+NT+PM S L+ Sbjct: 3 FQLAWLRSDSKAILAIHNHMVTNNPRMSVGHNDXGHNSWTLEIKNLQRNDSGNYMCQINTEPMTSQRSSLQ 73
BLAST of AGAP010222-PA vs. L. salmonis genes
Match: EMLSAG00000011972 (supercontig:LSalAtl2s:LSalAtl2s850:6395:172647:1 gene:EMLSAG00000011972 transcript:EMLSAT00000011972 description:"maker-LSalAtl2s850-augustus-gene-0.13") HSP 1 Score: 63.1586 bits (152), Expect = 8.517e-14 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 10 ILLGLLVLESTWA----SKSDNHVIAKDF--PKFT-QPIQNVSAVIGRDASLNCFIDH-AQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQV 120 ++LG+L+L S A S +D+ + +D P F P NVSA+I A L C + + + + W+R ILT+ E + + RFS HNV EW L IK V+ D G Y CQ+ Sbjct: 10 LILGVLILCSDTARPLLSHNDDVSLTEDEEEPYFDGSPPSNVSALIDNTAFLTCIVKNLGKAKTVTWLRHRDVHILTVGEYTYTTDERFSAKHNVDTNEWVLVIKYVQERDAGIYECQI 128
BLAST of AGAP010222-PA vs. nr
Match: gi|1098691684|ref|XP_018803237.1| (PREDICTED: protein CEPU-1-like, partial [Bactrocera latifrons]) HSP 1 Score: 133.65 bits (335), Expect = 7.888e-35 Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 0 Query: 32 KDFPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 KD PKF +P+QNV+ +GR+A L C +D+ Q +KIAW+RV+TQTILT+ +VI++N+R SI H R W L I++VK +D+GWYMCQVNTDPM S G+L+V+ P Sbjct: 41 KDLPKFGEPLQNVTVPVGREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNNRMSITH-ADKRAWILRIRDVKEADKGWYMCQVNTDPMKSQVGYLDVVVPP 146
BLAST of AGAP010222-PA vs. nr
Match: gi|1036896164|ref|XP_017047918.1| (PREDICTED: lachesin isoform X3 [Drosophila ficusphila]) HSP 1 Score: 132.88 bits (333), Expect = 1.044e-34 Identity = 60/122 (49.18%), Postives = 89/122 (72.95%), Query Frame = 0 Query: 17 LESTWASKSDNHVIAKDFPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 L+S ++ D+ DFP+F +PI NV+ +GRDA + C +++ +G+K+AW+RV+TQTIL+++ NVIS+N R S+ +N R W L IKEV+ +D+GWYMCQVNTDPM S G+L+V+ P Sbjct: 57 LDSQQTAQEDS-----DFPRFAEPIANVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYND-HRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGYLQVVVPP 172
BLAST of AGAP010222-PA vs. nr
Match: gi|668449920|gb|KFB39268.1| (AGAP008778-PA-like protein [Anopheles sinensis]) HSP 1 Score: 131.339 bits (329), Expect = 1.074e-34 Identity = 58/111 (52.25%), Postives = 84/111 (75.68%), Query Frame = 0 Query: 34 FPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTPSDYWSM 144 FP+F +PI N++ IGRDA L C +D+ +G+K+AW+RV+TQTIL+++ NVI++N R S+ +N R W L I+EV+ +D+GWYMCQVNTDPM S G+L+V+ P+ SM Sbjct: 21 FPRFAEPIPNITVTIGRDALLACVVDNLKGYKVAWVRVDTQTILSIHHNVITQNPRISLTYND-HRSWYLHIREVEENDRGWYMCQVNTDPMRSRKGYLQVVVPPAIVESM 130
BLAST of AGAP010222-PA vs. nr
Match: gi|1060188815|ref|XP_017834895.1| (PREDICTED: uncharacterized protein LOC108594271 isoform X2 [Drosophila busckii]) HSP 1 Score: 135.961 bits (341), Expect = 1.089e-34 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 0 Query: 16 VLESTWASKSDNHVIAKDFPKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTP 138 +LE + N + KD PKF +P+QNV+ + R+A L C +D+ Q +KIAW+RV+TQTILT+ +VI++NHR SI H R W L I++VK SD+GWYMCQ+NTDPM S G+L+V+ P Sbjct: 115 LLEDIREDTAINTIPEKDLPKFGEPLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITH-AEKRAWILRIRDVKESDKGWYMCQINTDPMKSQVGYLDVVVPP 236
BLAST of AGAP010222-PA vs. nr
Match: gi|158293571|ref|XP_314904.3| (AGAP008778-PA, partial [Anopheles gambiae str. PEST] >gi|157016773|gb|EAA10108.3| AGAP008778-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-34 Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = 0 Query: 35 PKFTQPIQNVSAVIGRDASLNCFIDHAQGFKIAWIRVETQTILTMNENVISRNHRFSIDHNVLDREWRLSIKEVKPSDQGWYMCQVNTDPMMSTTGFLEVLGTPSDYWSM 144 P+F +PI N++ IGRDA L C +D+ +G+K+AW+RV+TQTIL+++ NVI++N R S+ +N R W L I+EV+ SD+GWYMCQVNTDPM S G+L+V+ P+ SM Sbjct: 1 PRFAEPIPNITVTIGRDALLACVVDNLKGYKVAWVRVDTQTILSIHHNVITQNPRISLTYN-DHRSWYLHIREVEESDRGWYMCQVNTDPMRSRKGYLQVVVPPAIIESM 109 The following BLAST results are available for this feature:
BLAST of AGAP010222-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of AGAP010222-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of AGAP010222-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:443339..449726+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-4.17 ID=maker-scaffold34_size539781-snap-gene-4.17|Name=AGAP010222-PA|organism=Tigriopus kingsejongensis|type=gene|length=6388bp|location=Sequence derived from alignment at scaffold34_size539781:443339..449726+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP010222-PA' has the following synonyms
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