unnamed protein product partial, maker-scaffold34_size539781-snap-gene-4.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 83.5741 bits (205), Expect = 4.459e-19 Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = 0 Query: 12 KAREKWLADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELGFC--TKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQK----DTEVTCTMTLESYGHRADNIVYNWKD 181 + +EK + D + GYDKR RP DGP INV +Y++ + K ++ V + R+ WND RL ++ G L + D VW+PDTF N K E ++R+ +G +L S R L CP+ + D +V C + + SYG D+++Y WK+ Sbjct: 9 RQKEKQVLDSILGTGYDKRIRPSGKNDTDGPATINVNIYLRTISRIDDVKMEYSVQVTF-REQWNDERLRYYDDTHGHLKYLTLTD---PTKVWMPDTFFRNEKEARKHE---IIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQV-CVLQIASYGWAKDDLIYLWKE 176
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 82.8037 bits (203), Expect = 1.090e-18 Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 27 YDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQHL-VVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQD-NPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 YD++ RP D P+K++V I+ +G + + L ++ Y RQ+W DPRL ++ + + +P +Q +W PDTF++N KN +L + T F+R+ DG + S R K C + + + C + + S+GH D I+YNW Sbjct: 89 YDRQIRP---QIGDSPIKVSVNFAIRSMGPVDEQKQLFLMDCYFRQYWTDPRLVYNSSKLNE-----LPMNWQXLTKIWRPDTFIINGKNSYLHK---MTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNW 235
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 75.485 bits (184), Expect = 4.088e-16 Identity = 58/208 (27.88%), Postives = 90/208 (43.27%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTK-HQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLIC-------PVSQKDTEVTCTMTLESYGHRADNIVYNWK--------DFSADSLMIDA---------VAKRTYSRAQLKFKLKK 208 GYD R RP P+ + + I ++ ++ YL Q+W D RLS S E ++ L + F + +W+PDTF N KN FL + T+ +R+ DG++ RF T L C P+ ++ CT+ +ESYG+ ++V W+ D I +A TY R L FKL++ Sbjct: 90 GYDIRLRP---NFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFSTE---EDKVLTLSGDFSEK-IWVPDTFFANDKNSFLHD---VTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQN----CTVEIESYGYTVSDVVMYWRQKPVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQR 283
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 75.485 bits (184), Expect = 4.632e-16 Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFC-TKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQD-NPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQK----DTEVTCTMTLESYGHRADNIVYNWKDFSADSLMIDAVAKRTYSRAQLKFKLKKVVSTGD 214 Y++R RP P K+ + + I +G K Q +V Y RQ W D RLS + S +P +Q N +W PDT+ +N K S+ T FLR+ DG V S R C + K D++ C + + SYG+ AD ++Y+WKD ++L I +AK T + +F L K +S + Sbjct: 494 SYNRRIRP---NFGGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSFN----ATSSVTELPLNWQILNKIWKPDTYFINGKK---SKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQ-ECPLHIGSYGYTADEVLYDWKD---NALEISTLAKATMT----QFNLMKWISQAE 670
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 68.1662 bits (165), Expect = 1.035e-13 Identity = 52/169 (30.77%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 27 YDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQH-LVVSGYLRQFWNDPRLSMSN---EVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQK----DTEVTCTMTLESYGHRADNIVYNWKDFSADSL 187 YDKR RP PVK+ + + I +G + ++ + Y RQ W D RL + EV+ L +W+PDTF++N K FL + T F+RV G V S R C ++ K DT++ C + L S+GH +++Y WK A S Sbjct: 81 YDKRIRP---KLGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERLKYNTSGVEVLALNWAFLAK-------IWVPDTFIINGKKSFLHK---ITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQI-CPLKLGSFGHSNKDLIYQWKKPKAVSF 235
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 59.3066 bits (142), Expect = 1.176e-10 Identity = 49/207 (23.67%), Postives = 83/207 (40.10%), Query Frame = 0 Query: 6 ARHFSEKAREKWLADKTV-PQGYDKRFRPPSITTEDGPVKINVTMYIQELGFCTK-HQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLL---------VPD------MFQ-----------DNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 + + + EK + D + P YDKR RP + + D + V ++++ LRQ WND RL ++++ E ++ PD +FQ + VW+ DTF N K G + ++RV +G VL S R C + + TC + + SYG ++++Y WK+ Sbjct: 36 GKEVNYRQEEKKILDSVLGPDVYDKRIRPSGLNSTDSASLVTVNIFVRSFSNIDDVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHN---ILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKE 239
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000004920 (supercontig:LSalAtl2s:LSalAtl2s259:1063168:1099810:-1 gene:EMLSAG00000004920 transcript:EMLSAT00000004920 description:"maker-LSalAtl2s259-augustus-gene-11.12") HSP 1 Score: 58.151 bits (139), Expect = 2.074e-10 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 102 VWIPDTFVVNSKNG-FLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQK----DTEVTCTMTLESYGHRADNIVYNWK 180 VW+PDTF N K G F + P ++RV +G +L S R L CP+S + DT+ TC + + SYG D++VYNWK Sbjct: 7 VWMPDTFFRNEKEGKFHNIIQPNL----YIRVFPNGDILYSIRISLTLSCPMSLELFPLDTQ-TCFLRVASYGWTVDDVVYNWK 85
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000002530 (supercontig:LSalAtl2s:LSalAtl2s14:125553:213163:-1 gene:EMLSAG00000002530 transcript:EMLSAT00000002530 description:"maker-LSalAtl2s14-augustus-gene-3.12") HSP 1 Score: 55.0694 bits (131), Expect = 2.237e-9 Identity = 50/181 (27.62%), Postives = 75/181 (41.44%), Query Frame = 0 Query: 4 TEARHFSEKAREKWLADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNG-FLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWK 180 +E + E+ ++K L + YD R RP D I V +YI+ + +L L E I K L + D VW+PDTF N K G F + P ++R+ +G VL S R L CP++ K + C++ + SYG D++ Y WK Sbjct: 13 SEGQSIIERKKKKILDNILGKDVYDNRIRPSGRNGTDTATIIVVNLYIRSFAKIDDVKMFKTKMFL--------LKECRE-IAKIKYLTMTDA---KKVWMPDTFFRNEKEGRFHNILVPNV----YIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTDDLQYIWK 177
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000010666 (supercontig:LSalAtl2s:LSalAtl2s706:296770:341480:-1 gene:EMLSAG00000010666 transcript:EMLSAT00000010666 description:"maker-LSalAtl2s706-snap-gene-3.11") HSP 1 Score: 53.1434 bits (126), Expect = 5.775e-9 Identity = 35/106 (33.02%), Postives = 46/106 (43.40%), Query Frame = 0 Query: 54 LGFCTKHQHLVVSG---------YLRQFWNDPRLSMSNE------VIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRF 144 L F T Q + +G Y RQFW DPRLS + V+G E L +W+PDTF VN K + + T FLR++ G +L S F Sbjct: 109 LSFPTPRQRTLFNGNTKDFTLDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRL---------IWVPDTFFVNEKTAYFHK---ATTENQFLRILHTGEILRSISF 202
BLAST of unnamed protein product partial vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5") HSP 1 Score: 51.6026 bits (122), Expect = 4.660e-8 Identity = 35/124 (28.23%), Postives = 51/124 (41.13%), Query Frame = 0 Query: 68 YLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDN-----PVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFS 183 Y RQ+W RLS + + + L D N +W PDT+ NG S T+ LR+ G + S R K CP+ K + +C + L SY + D + Y W+ S Sbjct: 4 YFRQYWRXERLSFTG--LKNNTHHLKIDQLSLNVKMLEKIWKPDTYF---HNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSS 122
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 84.7297 bits (208), Expect = 6.068e-18 Identity = 53/160 (33.12%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV + ++I G V+ +LRQ WNDPRL+ S +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W+D Sbjct: 56 GYDARIRP---NFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQD 205
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 84.7297 bits (208), Expect = 6.555e-18 Identity = 53/160 (33.12%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV + ++I G V+ +LRQ WNDPRL+ S +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W+D Sbjct: 56 GYDARIRP---NFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQD 205
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 84.7297 bits (208), Expect = 6.555e-18 Identity = 53/160 (33.12%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV + ++I G V+ +LRQ WNDPRL+ S +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W+D Sbjct: 56 GYDARIRP---NFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQD 205
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 82.0333 bits (201), Expect = 5.317e-17 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV ++ ++I G V+ +LRQ WNDPRL+ NE +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W++ Sbjct: 51 GYDARIRP---NFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAY-NEY-PDDSLDLDPSML--DSIWKPDLFFANEKGAHFHE---ITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE 200
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 82.0333 bits (201), Expect = 5.799e-17 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV ++ ++I G V+ +LRQ WNDPRL+ NE +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W++ Sbjct: 51 GYDARIRP---NFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAY-NEY-PDDSLDLDPSML--DSIWKPDLFFANEKGAHFHE---ITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE 200
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 82.0333 bits (201), Expect = 6.203e-17 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV ++ ++I G V+ +LRQ WNDPRL+ NE +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W++ Sbjct: 51 GYDARIRP---NFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAY-NEY-PDDSLDLDPSML--DSIWKPDLFFANEKGAHFHE---ITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE 200
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 81.6481 bits (200), Expect = 6.509e-17 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV ++ ++I G V+ +LRQ WNDPRL+ NE +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W++ Sbjct: 51 GYDARIRP---NFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAY-NEY-PDDSLDLDPSML--DSIWKPDLFFANEKGAHFHE---ITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE 200
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 81.2629 bits (199), Expect = 1.040e-16 Identity = 53/158 (33.54%), Postives = 77/158 (48.73%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKH-QHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 GYD R RP + PV + ++I G T+ V+ +LRQ WNDPRL+ +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TCTM LES+G+ +++++ W Sbjct: 56 GYDARIRP---NFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYRE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEW 203
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 80.4925 bits (197), Expect = 1.586e-16 Identity = 52/160 (32.50%), Postives = 76/160 (47.50%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 GYD R RP + PV + ++I G V+ +LRQ WNDPRL+ S +S L P M + +W PD F N K E T LR+ +G+VL S R L CP+ K+ + TC M LES+G+ +++++ W + Sbjct: 47 GYDARIRP---NFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDE 196
BLAST of unnamed protein product partial vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 79.337 bits (194), Expect = 4.750e-16 Identity = 54/158 (34.18%), Postives = 79/158 (50.00%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKH-QHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 GYD R RP + PV + ++I G T+ V+ +LRQ WND RL+ S +S L P M + +W PD F N K + D TT + LR+ +G VL S R L CP+ K+ + TCTM LES+G+ +++++ W Sbjct: 57 GYDARIRP---NFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGA--NFHDVTTDNK-LLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEW 204
BLAST of unnamed protein product partial vs. nr
Match: gi|313849050|dbj|BAJ41377.1| (GABA receptor [Tetranychus urticae]) HSP 1 Score: 88.9669 bits (219), Expect = 8.290e-17 Identity = 58/163 (35.58%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQH-LVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSA 184 GYDKR RP PVK+ VTM+I + ++ Q Y RQ W D RLS S +LV D +W+PDTF N K + E T +FLR+ DG VL S R CP++ + + C + +ESYG+ +I+YNW D +A Sbjct: 74 GYDKRVRP---NYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKAR--HGISQILVDAEVADK-IWVPDTFFANEKQAYFHE---ATTKNTFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENA 227
BLAST of unnamed protein product partial vs. nr
Match: gi|441430522|gb|AGC31411.1| (GABA-gated chloride channel 1 subunit, partial [Tetranychus urticae] >gi|441430524|gb|AGC31412.1| GABA-gated chloride channel 1 subunit, partial [Tetranychus urticae]) HSP 1 Score: 88.9669 bits (219), Expect = 8.575e-17 Identity = 58/163 (35.58%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQH-LVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSA 184 GYDKR RP PVK+ VTM+I + ++ Q Y RQ W D RLS S +LV D +W+PDTF N K + E T +FLR+ DG VL S R CP++ + + C + +ESYG+ +I+YNW D +A Sbjct: 59 GYDKRVRP---NYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKAR--HGISQILVDAEVADK-IWVPDTFFANEKQAYFHE---ATTKNTFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENA 212
BLAST of unnamed protein product partial vs. nr
Match: gi|597867023|gb|EYC16415.1| (hypothetical protein Y032_0033g2643 [Ancylostoma ceylanicum]) HSP 1 Score: 88.5817 bits (218), Expect = 8.726e-17 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 4 TEARHFSEKAREKW--LADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELGFCTK-HQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSADSLMIDAVAKRTYSRAQLKFKLKKVVSTGDG 215 +E +H +EK L DK V +D+R RP P+++N+T +I + T+ + YLRQ W DPRL+ ++V + S + DM + +W PDTF N K F E T SFLR+ G+VL S R CP++ + C + +ESYG+ +I+Y+W +++ ID + + +++V+S G Sbjct: 49 SEQQHSNEKLENNVSKLLDKLVA-SHDRRIRP---NYGGPPIEVNITAHITTISAITEVSMDYTLDLYLRQIWKDPRLAWESDV--QSSLTIGIDMVKT--IWTPDTFFPNEKKSFFHE---ATSHNSFLRIDNHGNVLRSIRLTVTANCPMNLHTFPLDIQECALEIESYGYSTRDIIYHWH--GPNAVTIDENVHLAHFSIGDHYHIERVISLSTG 253
BLAST of unnamed protein product partial vs. nr
Match: gi|597867022|gb|EYC16414.1| (hypothetical protein Y032_0033g2643 [Ancylostoma ceylanicum]) HSP 1 Score: 88.5817 bits (218), Expect = 8.741e-17 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 4 TEARHFSEKAREKW--LADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELGFCTK-HQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSADSLMIDAVAKRTYSRAQLKFKLKKVVSTGDG 215 +E +H +EK L DK V +D+R RP P+++N+T +I + T+ + YLRQ W DPRL+ ++V + S + DM + +W PDTF N K F E T SFLR+ G+VL S R CP++ + C + +ESYG+ +I+Y+W +++ ID + + +++V+S G Sbjct: 57 SEQQHSNEKLENNVSKLLDKLVA-SHDRRIRP---NYGGPPIEVNITAHITTISAITEVSMDYTLDLYLRQIWKDPRLAWESDV--QSSLTIGIDMVKT--IWTPDTFFPNEKKSFFHE---ATSHNSFLRIDNHGNVLRSIRLTVTANCPMNLHTFPLDIQECALEIESYGYSTRDIIYHWH--GPNAVTIDENVHLAHFSIGDHYHIERVISLSTG 261
BLAST of unnamed protein product partial vs. nr
Match: gi|441430526|gb|AGC31413.1| (GABA-gated chloride channel 1 subunit, partial [Tetranychus urticae]) HSP 1 Score: 88.9669 bits (219), Expect = 8.994e-17 Identity = 60/163 (36.81%), Postives = 81/163 (49.69%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKHQH-LVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSA 184 GYDKR RP PVK+ VTM+I + ++ Q Y RQ W D RLS S +LV D +W+PDTF N K + E TTK +FLR+ DG VL S R CP++ + + C + +ESYG+ +I+YNW D +A Sbjct: 61 GYDKRVRP---NYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKAR--HGISQILVDAEVADK-IWVPDTFFANEKQAYFHEA--TTK-NTFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENA 214
BLAST of unnamed protein product partial vs. nr
Match: gi|919035807|ref|XP_013401391.1| (glycine receptor subunit alpha-4-like [Lingula anatina]) HSP 1 Score: 88.1965 bits (217), Expect = 1.176e-16 Identity = 57/175 (32.57%), Postives = 86/175 (49.14%), Query Frame = 0 Query: 11 EKAREKWLADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELG-FCTKHQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKD 181 E A + + TV +GYD R RP + P + V + I F + + V+ YLRQ WNDPRL+++ V G ++ + + D + +W+PD F N K + D TT LR+ DGSVL S R KL C + + TC + + SY + D+I++ W D Sbjct: 33 EIAHQALVEQMTVVEGYDSRIRPH--LRQGTPTIVRVNLAINSFSEFNSANMDFSVNLYLRQMWNDPRLALNASVHGHDAGITLSDKALAD-LWVPDLFFSNEKQSW--RHDITTPN-VLLRIGQDGSVLYSQRLSAKLDCLYDFGNFPMDIQTCRIEMHSYAYTTDDIIFVWSD 201
BLAST of unnamed protein product partial vs. nr
Match: gi|929087848|ref|XP_014054561.1| (PREDICTED: glycine receptor subunit alpha-4-like isoform X3 [Salmo salar]) HSP 1 Score: 87.8113 bits (216), Expect = 1.468e-16 Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKH-QHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 GYD R RP T PV + ++I G T+ ++ +LRQ WNDPRL+ +S L P M + +W PD F N K E T LR+ DGSVL S R L CP+ K+ + TCTM LES+G+ +++++ W Sbjct: 6 GYDARIRPNFKGTLSPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPRLAYQE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFQDGSVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEW 156
BLAST of unnamed protein product partial vs. nr
Match: gi|309358104|emb|CAP34448.2| (Protein CBR-LGC-38 [Caenorhabditis briggsae]) HSP 1 Score: 87.8113 bits (216), Expect = 1.504e-16 Identity = 58/202 (28.71%), Postives = 99/202 (49.01%), Query Frame = 0 Query: 18 LADKTVPQGYDKRFRPPSITTEDGPVKINVTMYIQELGFCTK-HQHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNWKDFSADSLMIDAVAKRTYSRAQLKFKLKKVVSTGDG 215 L DK + +D+R RP P+++N+T ++ + ++ + YLRQ W DPRL+ ++V ++S + DM + +W PDTF N K F E T SFLR+ + G+VL S R CP+S + C + +ESYG+ +I+Y+W A+++ ID + + +++ +S G Sbjct: 56 LLDKLI-ASHDRRIRP---NYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAWESDV--EDSLTIGIDMVKT--IWTPDTFFPNEKKSFFHE---ATSHNSFLRIDSHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWH--GANAVTIDENVHLAHFTIGEHYHIERTISLSTG 244
BLAST of unnamed protein product partial vs. nr
Match: gi|929087844|ref|XP_014054559.1| (PREDICTED: glycine receptor subunit alpha-4-like isoform X1 [Salmo salar]) HSP 1 Score: 87.4261 bits (215), Expect = 1.993e-16 Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKH-QHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 GYD R RP T PV + ++I G T+ ++ +LRQ WNDPRL+ +S L P M + +W PD F N K E T LR+ DGSVL S R L CP+ K+ + TCTM LES+G+ +++++ W Sbjct: 57 GYDARIRPNFKGTLSPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPRLAYQE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFQDGSVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEW 207
BLAST of unnamed protein product partial vs. nr
Match: gi|1079803714|ref|XP_018526874.1| (PREDICTED: glycine receptor subunit alpha-4-like, partial [Lates calcarifer]) HSP 1 Score: 87.0409 bits (214), Expect = 2.050e-16 Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 0 Query: 26 GYDKRFRPPSITTEDGPVKINVTMYIQELGFCTKH-QHLVVSGYLRQFWNDPRLSMSNEVIGKESTLLVPDMFQDNPVWIPDTFVVNSKNGFLSEDDPTTKGRSFLRVMADGSVLGSTRFRTKLICPVSQKDTEV---TCTMTLESYGHRADNIVYNW 179 GYD R RP + PV + ++I G T+ ++ +LRQ WNDPRL+ S +S L P M + +W PD F N K E T LR+ DGSVL S R L CP+ K+ + TCTM LES+G+ +++++ W Sbjct: 33 GYDARIRP---NFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPRLAYSE--YPDDSLDLDPSML--DSIWKPDLFFANEKGANFHE---VTTDNKLLRIFQDGSVLYSIRLTLTLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEW 180 The following BLAST results are available for this feature:
BLAST of unnamed protein product partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 10
BLAST of unnamed protein product partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of unnamed protein product partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold34_size539781:473774..476954- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold34_size539781-snap-gene-4.23 ID=maker-scaffold34_size539781-snap-gene-4.23|Name=unnamed protein product partial|organism=Tigriopus kingsejongensis|type=gene|length=3181bp|location=Sequence derived from alignment at scaffold34_size539781:473774..476954- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'unnamed protein product partial' has the following synonyms
Add to Basket
|