universal minicircle sequence binding protein, maker-scaffold351_size199180-snap-gene-0.28 (gene) Tigriopus kingsejongensis

Overview
Nameuniversal minicircle sequence binding protein
Unique Namemaker-scaffold351_size199180-snap-gene-0.28
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of universal minicircle sequence binding protein vs. L. salmonis genes
Match: EMLSAG00000012742 (supercontig:LSalAtl2s:LSalAtl2s967:9777:11237:1 gene:EMLSAG00000012742 transcript:EMLSAT00000012742 description:"snap-LSalAtl2s967-processed-gene-0.109")

HSP 1 Score: 55.0694 bits (131), Expect = 2.651e-9
Identity = 27/83 (32.53%), Postives = 32/83 (38.55%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGA---RGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGG 362
             E GH+S  CPS                M CY C E GH+S +CP            + CY C E GH S +CP      G  
Sbjct:   73 SEFGHLSFSCPSKTTSHDTTAVDHDVKNMKCYYCHEFGHVSNDCPQ-----------VECYKCHEFGHFSSKCPNRSEATGAN 144
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BLAST of universal minicircle sequence binding protein vs. L. salmonis genes
Match: EMLSAG00000003980 (supercontig:LSalAtl2s:LSalAtl2s213:211960:214254:1 gene:EMLSAG00000003980 transcript:EMLSAT00000003980 description:"augustus_masked-LSalAtl2s213-processed-gene-2.4")

HSP 1 Score: 53.1434 bits (126), Expect = 5.492e-8
Identity = 53/200 (26.50%), Postives = 78/200 (39.00%), Query Frame = 0 
Query:  209 GKKADAESSDEEESSDEEEADAPKAKAMEEDEEETVEFDHTPKKA----GL--GFSV---------------------DRQGDQSF-GRGRGGRGRG-GDRGRGET---------GHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSG----GGGGRGRG 366
            G+K + ++S+  +S D+E       K ++ D  + V+ D T K      GL  GF V                     D+  D+ F G  +  R R   D  R +          GH   DCP    G          +C+ C    H S++C S   G    R  + C+ C ETGH+++ CP+   G    GGG R  G
Sbjct:  139 GRKKNKKNSENVKSIDDESLRKVNKKNLKNDASKKVKLDITGKTVMEGEGLFQGFRVKLDDLPRLKKLEKDLKLAVKEDKINDEEFQGTLKKERRRAENDLARSKKMVCYLCRKPGHFLSDCPEAKDGKKATKVGAVGSCFKCGSMEHTSKDCESKLKGEAAYRFAV-CFICSETGHLAKACPSNPKGLYPKGGGCRFCG 337
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BLAST of universal minicircle sequence binding protein vs. SwissProt
Match: gi|729704|sp|Q04832.1|HEXP_LEIMA (RecName: Full=DNA-binding protein HEXBP; AltName: Full=Hexamer-binding protein)

HSP 1 Score: 83.1889 bits (204), Expect = 7.508e-17
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGR 363
            G+ GHISRDCP+G GG  G G R   TCY C + GH+SR+CP+G GG  GA G   CY C E+GHMSRECP+ GS G G R
Sbjct:  146 GDAGHISRDCPNGQGGYSGAGDR---TCYKCGDAGHISRDCPNGQGGYSGA-GDRKCYKCGESGHMSRECPSAGSTGSGDR 222

HSP 2 Score: 74.7146 bits (182), Expect = 5.826e-14
Identity = 48/87 (55.17%), Postives = 54/87 (62.07%), Query Frame = 0 
Query:  270 GRGGRGRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP 353
            G+GG    GDR     G+ GHISRDCP+G GG  G G R    CY C E+GHMSRECPS G  G G R    CY C + GH+SRECP
Sbjct:  158 GQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---KCYKCGESGHMSRECPSAGSTGSGDR---ACYKCGKPGHISRECP 238

HSP 3 Score: 57.3806 bits (137), Expect = 4.065e-8
Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 0 
Query:  280 RGRGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPT 354
            R  G+ GH +R+CP     G         TC+ C E GHMSRECP+    G  A G MTC+ C E GHMSR+CP 
Sbjct:   19 RNCGKEGHYARECPEADSKG----DERSTTCFRCGEEGHMSRECPNEARSG--AAGAMTCFRCGEAGHMSRDCPN 87
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BLAST of universal minicircle sequence binding protein vs. SwissProt
Match: gi|75322408|sp|Q65XV7.1|RFA1C_ORYSJ (RecName: Full=Replication protein A 70 kDa DNA-binding subunit C; Short=OsRPA70c; AltName: Full=Replication factor A protein 1C; AltName: Full=Replication protein A 1C)

HSP 1 Score: 58.9214 bits (141), Expect = 4.506e-8
Identity = 39/141 (27.66%), Postives = 57/141 (40.43%), Query Frame = 0 
Query:  248 HTPKKAGLGFSVDRQGDQSFGRGRGGRGRGGDRGRGET------GHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP---------TGGSGGGGGRGRGGRGGRGG 373
            H+ +   +G  +D Q   + G   G        G  E       GH +RDCP    GG        + C+ C++ GH SR+CP    GG        C+ C++ GH +R+CP         T G+     RG   +   GG
Sbjct:  824 HSAQICHVGADMDMQETSAGGSSMGNYNSIAGNGSSECYKCKQPGHYARDCPGQSTGG--------LECFKCKQPGHFSRDCPVQSTGGS------ECFKCKQPGHFARDCPGQSTGAQHQTYGNNVAASRGYNRQSFVGG 950
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BLAST of universal minicircle sequence binding protein vs. SwissProt
Match: gi|62288102|sp|P69730.1|GAG_EIAV9 (RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=Capsid protein p26; Short=CA; Contains: RecName: Full=p1; Contains: RecName: Full=Nucleocapsid protein p11; Short=NC; Contains: RecName: Full=p9 >gi|62288103|sp|P69731.1|GAG_EIAVC RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=Capsid protein p26; Short=CA; Contains: RecName: Full=p1; Contains: RecName: Full=Nucleocapsid protein p11; Short=NC; Contains: RecName: Full=p9 >gi|62288104|sp|P69732.1|GAG_EIAVY RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=Capsid protein p26; Short=CA; Contains: RecName: Full=p1; Contains: RecName: Full=Nucleocapsid protein p11; Short=NC; Contains: RecName: Full=p9)

HSP 1 Score: 58.151 bits (139), Expect = 5.299e-8
Identity = 27/74 (36.49%), Postives = 36/74 (48.65%), Query Frame = 0 
Query:  293 PSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSREC---PTGGSGGGGGR 363
            P  GG   GG  +   TCYNC + GH+S +C          R P  C+ C++ GH S++C   P  G  G  GR
Sbjct:  366 PFKGGALKGGPLKAAQTCYNCGKPGHLSSQC----------RAPKVCFKCKQPGHFSKQCRSVPKNGKQGAQGR 429
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BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|146104187|ref|XP_001469754.1| (putative universal minicircle sequence binding protein (UMSBP) [Leishmania infantum JPCM5] >gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative [Leishmania donovani] >gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP) [Leishmania infantum JPCM5] >gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative [Leishmania donovani] >gi|1328827063|emb|SOX70022.1| universalminicirclesequencebindingprotein-putative [Leishmania infantum])

HSP 1 Score: 84.7297 bits (208), Expect = 6.208e-15
Identity = 57/100 (57.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:  269 RGRGGR--GRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGR 363
            RGR G   G GGDR     G+ GHISRDCP+G GG  G G R   TCY C + GH+SR+CP+G GG  GA G   CY C E+GHMSRECP+ GS G G R
Sbjct:  127 RGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---TCYKCGDAGHISRDCPNGQGGYSGA-GDRKCYKCGESGHMSRECPSAGSNGSGDR 222

HSP 2 Score: 76.6406 bits (187), Expect = 3.960e-12
Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:  270 GRGGRGRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP 353
            G+GG    GDR     G+ GHISRDCP+G GG  G G R    CY C E+GHMSRECPS G  G G R   TCY C + GH+SRECP
Sbjct:  158 GQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---KCYKCGESGHMSRECPSAGSNGSGDR---TCYKCGKPGHISRECP 238
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BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|1040911916|ref|XP_017218344.1| (PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2 [Daucus carota subsp. sativus])

HSP 1 Score: 87.8113 bits (216), Expect = 8.908e-15
Identity = 53/112 (47.32%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:  249 TPKKAGLGFSVDRQGDQSFGRGRGGRGRGGDRGRGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGG 360
            TP K   G+  D  G+     GRGG         GE+GH++R+CP GG       +RG   CY C E+GH+SRECP GG  GG A     CY C E+GHMSRECP GGS  G
Sbjct: 1178 TPDKEIGGW--DTAGNDGRASGRGGAAGNACYKCGESGHMARECPQGG-------SRGGNACYKCGESGHISRECPQGGSRGGSA-----CYKCGESGHMSRECPQGGSKAG 1275

HSP 2 Score: 71.633 bits (174), Expect = 1.411e-9
Identity = 45/83 (54.22%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGR 365
            GETGH++R+C  GGGGGG  G      CY C ETGHM+REC  GG  GG A     C+ C ETGHM+REC  GG  G G   R
Sbjct:  989 GETGHMARECTQGGGGGGSRGGNA---CYKCGETGHMARECTQGGNKGGNA-----CFKCGETGHMARECSQGGGSGAGNNVR 1063

HSP 3 Score: 70.8626 bits (172), Expect = 2.139e-9
Identity = 59/140 (42.14%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGG----GARGPMT--------------CYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGRGGGGPRGRGGPRGGRGGSGVRIDANAS-SNKKI 403
            GE+GHI+R+C  GGGGG       G  G M               CY C ETGHM+REC  GGGGGG   G   CY C ETGHM+REC  GG+ GG    + G  G        R   +GG  G+G  + ++ S SNK +
Sbjct:  940 GESGHIARECSQGGGGGSNACYKCGETGHMARECTQGGGSGGGNACYKCGETGHMARECTQGGGGGGSRGGN-ACYKCGETGHMARECTQGGNKGGNACFKCGETGH-----MARECSQGGGSGAGNNVRSSWSHSNKDV 1073

HSP 4 Score: 70.0922 bits (170), Expect = 3.735e-9
Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:  300 GGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGR 371
            G GGA G   CY C E+GHM+RECP GG  GG A     CY C E+GH+SRECP GGS GG    + G  G 
Sbjct: 1197 GRGGAAGN-ACYKCGESGHMARECPQGGSRGGNA-----CYKCGESGHISRECPQGGSRGGSACYKCGESGH 1262

HSP 5 Score: 67.781 bits (164), Expect = 2.447e-8
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:  276 RGGDRG---RGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSREC 352
              G       GE+GH++R+C  GGGGG          CY C E+GH++REC  GGGGG  A     CY C ETGHM+REC
Sbjct:  907 GAGGNSCYKCGESGHMARECSQGGGGGNA--------CYKCGESGHIARECSQGGGGGSNA-----CYKCGETGHMAREC 973
[Close]
BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|1021029160|gb|KZM86945.1| (hypothetical protein DCAR_024079 [Daucus carota subsp. sativus])

HSP 1 Score: 87.8113 bits (216), Expect = 8.908e-15
Identity = 53/112 (47.32%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:  249 TPKKAGLGFSVDRQGDQSFGRGRGGRGRGGDRGRGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGG 360
            TP K   G+  D  G+     GRGG         GE+GH++R+CP GG       +RG   CY C E+GH+SRECP GG  GG A     CY C E+GHMSRECP GGS  G
Sbjct: 1176 TPDKEIGGW--DTAGNDGRASGRGGAAGNACYKCGESGHMARECPQGG-------SRGGNACYKCGESGHISRECPQGGSRGGSA-----CYKCGESGHMSRECPQGGSKAG 1273

HSP 2 Score: 71.633 bits (174), Expect = 1.411e-9
Identity = 45/83 (54.22%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGR 365
            GETGH++R+C  GGGGGG  G      CY C ETGHM+REC  GG  GG A     C+ C ETGHM+REC  GG  G G   R
Sbjct:  989 GETGHMARECTQGGGGGGSRGGNA---CYKCGETGHMARECTQGGNKGGNA-----CFKCGETGHMARECSQGGGSGAGNNVR 1063

HSP 3 Score: 70.4774 bits (171), Expect = 3.510e-9
Identity = 57/138 (41.30%), Postives = 70/138 (50.72%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGG----GARGPMT--------------CYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGRGGGGPRGRGGPRGGRGGSGVRIDANASSNKK 402
            GE+GHI+R+C  GGGGG       G  G M               CY C ETGHM+REC  GGGGGG   G   CY C ETGHM+REC  GG+ GG    + G  G        R   +GG  G+G  + ++ S + K
Sbjct:  940 GESGHIARECSQGGGGGSNACYKCGETGHMARECTQGGGSGGGNACYKCGETGHMARECTQGGGGGGSRGGN-ACYKCGETGHMARECTQGGNKGGNACFKCGETGH-----MARECSQGGGSGAGNNVRSSWSHSNK 1071

HSP 4 Score: 70.0922 bits (170), Expect = 3.735e-9
Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:  300 GGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGR 371
            G GGA G   CY C E+GHM+RECP GG  GG A     CY C E+GH+SRECP GGS GG    + G  G 
Sbjct: 1195 GRGGAAGN-ACYKCGESGHMARECPQGGSRGGNA-----CYKCGESGHISRECPQGGSRGGSACYKCGESGH 1260

HSP 5 Score: 67.781 bits (164), Expect = 2.447e-8
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:  276 RGGDRG---RGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSREC 352
              G       GE+GH++R+C  GGGGG          CY C E+GH++REC  GGGGG  A     CY C ETGHM+REC
Sbjct:  907 GAGGNSCYKCGESGHMARECSQGGGGGNA--------CYKCGESGHIARECSQGGGGGSNA-----CYKCGETGHMAREC 973
[Close]
BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|1040911914|ref|XP_017218343.1| (PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1 [Daucus carota subsp. sativus])

HSP 1 Score: 87.8113 bits (216), Expect = 9.072e-15
Identity = 53/112 (47.32%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:  249 TPKKAGLGFSVDRQGDQSFGRGRGGRGRGGDRGRGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGG 360
            TP K   G+  D  G+     GRGG         GE+GH++R+CP GG       +RG   CY C E+GH+SRECP GG  GG A     CY C E+GHMSRECP GGS  G
Sbjct: 1178 TPDKEIGGW--DTAGNDGRASGRGGAAGNACYKCGESGHMARECPQGG-------SRGGNACYKCGESGHISRECPQGGSRGGSA-----CYKCGESGHMSRECPQGGSKAG 1275

HSP 2 Score: 71.633 bits (174), Expect = 1.424e-9
Identity = 45/83 (54.22%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGR 365
            GETGH++R+C  GGGGGG  G      CY C ETGHM+REC  GG  GG A     C+ C ETGHM+REC  GG  G G   R
Sbjct:  989 GETGHMARECTQGGGGGGSRGGNA---CYKCGETGHMARECTQGGNKGGNA-----CFKCGETGHMARECSQGGGSGAGNNVR 1063

HSP 3 Score: 70.8626 bits (172), Expect = 2.102e-9
Identity = 59/140 (42.14%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGG----GARGPMT--------------CYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGRGGGGPRGRGGPRGGRGGSGVRIDANAS-SNKKI 403
            GE+GHI+R+C  GGGGG       G  G M               CY C ETGHM+REC  GGGGGG   G   CY C ETGHM+REC  GG+ GG    + G  G        R   +GG  G+G  + ++ S SNK +
Sbjct:  940 GESGHIARECSQGGGGGSNACYKCGETGHMARECTQGGGSGGGNACYKCGETGHMARECTQGGGGGGSRGGN-ACYKCGETGHMARECTQGGNKGGNACFKCGETGH-----MARECSQGGGSGAGNNVRSSWSHSNKDV 1073

HSP 4 Score: 70.0922 bits (170), Expect = 3.703e-9
Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:  300 GGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGRGGGGPRGRGGPRGG 385
            G GGA G   CY C E+GHM+RECP GG  GG A     CY C E+GH+SRECP GGS GG    + G  G        R  P+GG
Sbjct: 1197 GRGGAAGN-ACYKCGESGHMARECPQGGSRGGNA-----CYKCGESGHISRECPQGGSRGGSACYKCGESGH-----MSRECPQGG 1271

HSP 5 Score: 67.781 bits (164), Expect = 2.470e-8
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:  276 RGGDRG---RGETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSREC 352
              G       GE+GH++R+C  GGGGG          CY C E+GH++REC  GGGGG  A     CY C ETGHM+REC
Sbjct:  907 GAGGNSCYKCGESGHMARECSQGGGGGNA--------CYKCGESGHIARECSQGGGGGSNA-----CYKCGETGHMAREC 973
[Close]
BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|729704|sp|Q04832.1|HEXP_LEIMA (RecName: Full=DNA-binding protein HEXBP; AltName: Full=Hexamer-binding protein >gi|159342|gb|AAA29245.1| HEXBP DNA binding protein [Leishmania major])

HSP 1 Score: 83.1889 bits (204), Expect = 2.327e-14
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGR 363
            G+ GHISRDCP+G GG  G G R   TCY C + GH+SR+CP+G GG  GA G   CY C E+GHMSRECP+ GS G G R
Sbjct:  146 GDAGHISRDCPNGQGGYSGAGDR---TCYKCGDAGHISRDCPNGQGGYSGA-GDRKCYKCGESGHMSRECPSAGSTGSGDR 222

HSP 2 Score: 74.7146 bits (182), Expect = 1.806e-11
Identity = 48/87 (55.17%), Postives = 54/87 (62.07%), Query Frame = 0 
Query:  270 GRGGRGRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP 353
            G+GG    GDR     G+ GHISRDCP+G GG  G G R    CY C E+GHMSRECPS G  G G R    CY C + GH+SRECP
Sbjct:  158 GQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---KCYKCGESGHMSRECPSAGSTGSGDR---ACYKCGKPGHISRECP 238
[Close]
BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|401420042|ref|XP_003874510.1| (putative universal minicircle sequence binding protein (UMSBP) [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322490746|emb|CBZ26010.1| putative universal minicircle sequence binding protein (UMSBP) [Leishmania mexicana MHOM/GT/2001/U1103])

HSP 1 Score: 83.1889 bits (204), Expect = 3.313e-14
Identity = 56/100 (56.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:  269 RGRGGR--GRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGR 363
            RGR G   G GGDR     G+ GHISRDCP+G GG  G G R   TCY C + GH+SR+CP+G GG  GA G   CY C E+GH+SRECP+ GS G G R
Sbjct:  127 RGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYSGAGDR---TCYKCGDAGHISRDCPNGQGGYSGA-GDRKCYKCGESGHISRECPSAGSTGSGDR 222

HSP 2 Score: 65.0846 bits (157), Expect = 4.145e-8
Identity = 44/84 (52.38%), Postives = 49/84 (58.33%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECP---SGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGR 363
            GE+GHISR+CPS G  G      G  TCY C + GH+SRECP      GG  G     TCY C E GHMSRECP+ G  G G R
Sbjct:  202 GESGHISRECPSAGSTG-----SGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGSDRTCYKCGEAGHMSRECPSAGGTGSGDR 280

HSP 3 Score: 62.7734 bits (151), Expect = 2.490e-7
Identity = 59/140 (42.14%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPT--GGSGGGGGRGRGGRGGRGG-GGPRG-----------RGGP--RGGRGGSGVRIDANASSNKKISFD 406
            GE GH+SR+CP+    G    A G MTC+ C E GHMSR+CP+    G  A+G   CY C + GH+SR+CP+  GGS GG G+ RG  G +GG GG R            R  P  +GG  G+G R          IS D
Sbjct:   49 GEEGHMSRECPNEARSG----AAGAMTCFRCGEAGHMSRDCPNSAKQGA-AKG-FECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRD 182
[Close]
BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|831783710|ref|XP_012757191.1| (hypothetical protein SAMD00019534_024390 [Acytostelium subglobosum LB1] >gi|735857823|dbj|GAM19264.1| hypothetical protein SAMD00019534_024390 [Acytostelium subglobosum LB1])

HSP 1 Score: 82.0333 bits (201), Expect = 3.454e-14
Identity = 40/68 (58.82%), Postives = 45/68 (66.18%), Query Frame = 0 
Query:  286 GHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP 353
            GH+S +CP   G G          C+NCQ+ GHMSRECP    GGGG R P TCYNCQ+TGHMSRECP
Sbjct:  108 GHMSNECPEKKGDGNN--------CFNCQKPGHMSRECPEKSSGGGG-RAPATCYNCQKTGHMSRECP 166
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BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|157876792|ref|XP_001686738.1| (putative universal minicircle sequence binding protein [Leishmania major strain Friedlin] >gi|68129813|emb|CAJ09119.1| putative universal minicircle sequence binding protein [Leishmania major strain Friedlin])

HSP 1 Score: 81.6481 bits (200), Expect = 7.594e-14
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGG 359
            G+ GHISRDCP+G GG  G G R   TCY C + GH+SR+CP+G GG  GA G   CY C E+GHMSRECP+ GS G
Sbjct:  146 GDAGHISRDCPNGQGGYSGAGDR---TCYKCGDAGHISRDCPNGQGGYSGA-GDRKCYKCGESGHMSRECPSAGSTG 218

HSP 2 Score: 72.7886 bits (177), Expect = 8.583e-11
Identity = 47/87 (54.02%), Postives = 53/87 (60.92%), Query Frame = 0 
Query:  270 GRGGRGRGGDRGR---GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECP 353
            G+GG    GDR     G+ GHISRDCP+G GG  G G R    CY C E+GHMSRECPS G  G   R    CY C + GH+SRECP
Sbjct:  158 GQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDR---KCYKCGESGHMSRECPSAGSTGSSDR---ACYKCGKPGHISRECP 238
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BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|1022770005|gb|KZS14419.1| (Protein partner of snf-like protein [Daphnia magna])

HSP 1 Score: 80.8777 bits (198), Expect = 1.356e-12
Identity = 43/88 (48.86%), Postives = 50/88 (56.82%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECP-----SGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGR 365
             E GH S +CP+ G G   GG RG  +CY C + GH+S ECP       GGG G +RG   CY C E GH+S ECPTG   GG G  R
Sbjct:  611 NEEGHTSYNCPTRGRGRSNGGTRGSRSCYKCNQEGHVSYECPTSSTRGRGGGRGASRGTRVCYKCNEEGHVSYECPTGQRSGGRGSAR 698
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BLAST of universal minicircle sequence binding protein vs. nr
Match: gi|1177798089|gb|ORC93018.1| (universal minicircle sequence binding protein (UMSBP) [Trypanosoma theileri])

HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-12
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPT 354
            G+TGH+SR+CP+   GG GG A     CYNC ETGH+SRECP+   GG G  G   CYNC ETGH+SRECPT
Sbjct:   50 GQTGHMSRECPTKAPGGAGGRA-----CYNCGETGHLSRECPTKTAGGAGGAGGRACYNCGETGHLSRECPT 116

HSP 2 Score: 72.0182 bits (175), Expect = 5.628e-11
Identity = 40/72 (55.56%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPT 354
            GE GH +R+CP+        G  G   CYNC +TGHMSRECP+   GG G R    CYNC ETGH+SRECPT
Sbjct:   24 GEAGHFARECPN-----VPPGTTGDRACYNCGQTGHMSRECPTKAPGGAGGR---ACYNCGETGHLSRECPT 87

HSP 3 Score: 67.781 bits (164), Expect = 1.616e-9
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPT 354
            G++GH+SR+CP+ GG G  G  R    CY+CQ+ GH++R+CP+   GG    G  TCYNC + GH+SR CP+
Sbjct:  134 GQSGHMSRECPNRGGDGYRGAPRS-RACYHCQQEGHLARDCPTAPAGGAPRGGDATCYNCGQPGHISRACPS 204

HSP 4 Score: 66.2402 bits (160), Expect = 5.922e-9
Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPS-GGGGGGGARGPMTCYNCQETGHMSRECPTGGSGG 359
            GETGH+SR+CP+   GG GG       CYNC ++GHMSRECP+ GG G  GA     CY+CQ+ GH++R+CPT  +GG
Sbjct:  105 GETGHLSRECPTKTAGGAGGAGG--RACYNCGQSGHMSRECPNRGGDGYRGAPRSRACYHCQQEGHLARDCPTAPAGG 180

HSP 5 Score: 65.0846 bits (157), Expect = 1.611e-8
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:  283 GETGHISRDCPSGGGGGGGGGARGPMTCYNCQETGHMSRECPSGGGGGGGARGPMTCYNCQETGHMSRECPTGGSGGGGGRGRGGRGGRGGGGPRGR 379
            GETGH+SR+CP+   GG GG       CYNC ETGH+SRECP+   GG G  G   CYNC ++GHMSRECP           RGG G R  G PR R
Sbjct:   76 GETGHLSRECPTKTAGGAGGAGG--RACYNCGETGHLSRECPTKTAGGAGGAGGRACYNCGQSGHMSRECPN----------RGGDGYR--GAPRSR 158
The following BLAST results are available for this feature:
BLAST of universal minicircle sequence binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000127422.651e-932.53supercontig:LSalAtl2s:LSalAtl2s967:9777:11237:1 ge... [more]
EMLSAG000000039805.492e-826.50supercontig:LSalAtl2s:LSalAtl2s213:211960:214254:1... [more]
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BLAST of universal minicircle sequence binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|729704|sp|Q04832.1|HEXP_LEIMA7.508e-1759.26RecName: Full=DNA-binding protein HEXBP; AltName: ... [more]
gi|75322408|sp|Q65XV7.1|RFA1C_ORYSJ4.506e-827.66RecName: Full=Replication protein A 70 kDa DNA-bin... [more]
gi|62288102|sp|P69730.1|GAG_EIAV95.299e-836.49RecName: Full=Gag polyprotein; Contains: RecName: ... [more]
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BLAST of universal minicircle sequence binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|146104187|ref|XP_001469754.1|6.208e-1557.00putative universal minicircle sequence binding pro... [more]
gi|1040911916|ref|XP_017218344.1|8.908e-1547.32PREDICTED: protein RNA-directed DNA methylation 3-... [more]
gi|1021029160|gb|KZM86945.1|8.908e-1547.32hypothetical protein DCAR_024079 [Daucus carota su... [more]
gi|1040911914|ref|XP_017218343.1|9.072e-1547.32PREDICTED: protein RNA-directed DNA methylation 3-... [more]
gi|729704|sp|Q04832.1|HEXP_LEIMA2.327e-1459.26RecName: Full=DNA-binding protein HEXBP; AltName: ... [more]
gi|401420042|ref|XP_003874510.1|3.313e-1456.00putative universal minicircle sequence binding pro... [more]
gi|831783710|ref|XP_012757191.1|3.454e-1458.82hypothetical protein SAMD00019534_024390 [Acytoste... [more]
gi|157876792|ref|XP_001686738.1|7.594e-1459.74putative universal minicircle sequence binding pro... [more]
gi|1022770005|gb|KZS14419.1|1.356e-1248.86Protein partner of snf-like protein [Daphnia magna... [more]
gi|1177798089|gb|ORC93018.1|1.992e-1261.11universal minicircle sequence binding protein (UMS... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold351_size199180supercontigscaffold351_size199180:66396..68070 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold351_size199180-snap-gene-0.28-mRNA-1maker-scaffold351_size199180-snap-gene-0.28-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold351_size199180:66396..68070+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold351_size199180-snap-gene-0.28 ID=maker-scaffold351_size199180-snap-gene-0.28|Name=universal minicircle sequence binding protein|organism=Tigriopus kingsejongensis|type=gene|length=1675bp|location=Sequence derived from alignment at scaffold351_size199180:66396..68070+ (Tigriopus kingsejongensis)
ATGGACTCAACAGACGCGAATACCAACATCTACGTTTTCGACTACCTCAA
GCGCACTATCGGCGACAAAATGGCCAACGTTTTCAAGAAGAAGACCAACC
TGGCCAAGACTGACTTGCCCGAAGGCTCGCCTTCCATTCCGGACATGGTG
GCCTTCTACCAAAAGGCCGATGGCACGCCGCAGAAGCGCAAACTGGCCTT
CAGCCCGGCTTCGGGCAAGAAAGGCAAGAAAGCCAAGCGCACCGAGCCCA
GCGACTCTGAGGACGCCGAGGACTCGGCGGAGAAGGCCAAGCCCGTAGCC
AAAGGCAAGGCGGGCGGACCTAAGAAAGCCGTGGCCCCGGCCGAGGCCTC
GAGCGAAGAGGAAAGCAGCGAGGAGGAGGATGACCCGCCCAAGCAGCCCA
ACCGCAAGACGGCACCCGCCCCCAAGGTGGCGGCCAAAGCCGCCTTGAAC
GGTCAATCGGCCGACTCGTCCGAGGATTCGGAAGAGTCCGACGAGGAGGA
GGTGGCCGCTGTCGCCCCCAAGGCGGCGGCCAAGAAAGCCAAAGCCCAAA
GTGAGGAGGAGGAAGAGAGCAGCGAGGAGGAGGACGACGAGGAAGAGGCG
CCCAAGGTCAAGGCCGCCGCTAAGGGTAAAAAGGCTGACGCCGAGTCTTC
GGACGAAGAAGAATCTTCCGACGAGGAGGAGGCCGACGCCCCCAAGGCCA
AGGCCATGGAGGAAGATGAGGAAGAGACGGTCGAATTCGACCACACGCCC
AAGAAGGCGGGTTTGGGTTTCTCTGTGGATCGACAGGGCGATCAGAGTTT
TGGACGGGGTCGTGGCGGTCGAGGCCGAGGCGGCGACCGGGGCCGAGGCG
GTGATCGGGGCCGAGGAGCTCAACGAGGCCGTGGCGGCGGCGGAGGCGGC
GACAGCAGCTTTGGTCAAAGCAGTTGCTACAAATGCGGCGAGTCGGGCCA
TTACTCCCGCGAGTGCCCTTCGGGCGGCGGCGATAAATGCTTCAACTGCC
AGAAAGAAGGCCACATCTCCCGCGAGTGCCCCGATCGCAAGCCCCTCAGT
TGTTACAACTGCCAAGAGACGGGCCACATCTCGCGCGATTGTCCCTCCGG
CGGCGGCGGTGGTGGCGGCGGTGGAGCCCGTGGGCCCATGACCTGCTACA
ATTGCCAAGAGACCGGTCACATGTCCCGCGAATGCCCATCGGGCGGCGGT
GGAGGCGGCGGAGCTCGCGGTCCTATGACCTGCTATAACTGCCAAGAGAC
GGGTCACATGTCCCGCGAGTGTCCCACCGGGGGCAGCGGTGGCGGCGGAG
GTCGAGGCCGGGGCGGACGAGGTGGACGAGGCGGTAAGCTACCTTAATTT
CAACTTTTGTCAAACTCTGGTCTGACCACCCGTTTCTAATTTTTAGGTGG
TGGACCTCGCGGACGTGGTGGACCTCGCGGAGGTCGGGGCGGTAGTGGTG
TTCGCATTGATGCCAACGCCTCGAGTAACAAGAAGATTTCCTTCGACTAG
CGGACTCGTGAAGTTGATTTCGCGCGGGGCAGCCGAGGGCCTCCGTGTCT
CGCTATGGTGATGGCCATAAAGCTGACCCGTGTTCAGTTATCTGGATGTG
CCCTTTTTCTCTTCGCCTATACATACAAATATCCCGAATATATGTTTGGT
ATTTCAATAAAAGCCAGTTGAAAAG
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Synonyms
The feature 'universal minicircle sequence binding protein' has the following synonyms
Synonym
Tk02214
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