wash complex subunit fam21c-like, maker-scaffold352_size199037-snap-gene-0.31 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|81865867|sp|Q80X08.1|WASC2_RAT (RecName: Full=WASH complex subunit 2) HSP 1 Score: 80.1073 bits (196), Expect = 7.105e-14 Identity = 61/193 (31.61%), Postives = 93/193 (48.19%), Query Frame = 0 Query: 7 WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDEDDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 WE +E + +WS+ D +L L+ +R + ++ + L T + N+ N FL+L+NTQFIENRVYDE+ V+D L+ +EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 18 WERPWSVEEIRRSSQNWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIQETKATHCRLHNVFNDFLMLSNTQFIENRVYDEE---VEDQ----ALKTEAEKAEQEKTR-EQKEIDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEEDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 199
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|71151874|sp|Q5RDC1.1|WASC2_PONAB (RecName: Full=WASH complex subunit 2) HSP 1 Score: 78.5666 bits (192), Expect = 2.499e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 0 Query: 18 WSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+ +EQE + Q ++DL A+ GL L ++ IK G SEE D + L LE + Y RPLP LIGS ++ + +G Sbjct: 34 WSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKAEAEKTEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANGRVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 199
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|166971555|sp|Q641Q2.3|WAC2A_HUMAN (RecName: Full=WASH complex subunit 2A) HSP 1 Score: 78.1814 bits (191), Expect = 2.839e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 0 Query: 18 WSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+ +EQE + Q ++DL A+ GL L ++ IK G SEE D + L LE + Y RPLP LIGS ++ + +G Sbjct: 35 WSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKAEAEKTEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANGRVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|284018172|sp|Q9Y4E1.3|WAC2C_HUMAN (RecName: Full=WASH complex subunit 2C; AltName: Full=Vaccinia virus penetration factor; Short=VPEF) HSP 1 Score: 78.1814 bits (191), Expect = 3.205e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 0 Query: 18 WSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+ +EQE + Q ++DL A+ GL L ++ IK G SEE D + L LE + Y RPLP LIGS ++ + +G Sbjct: 35 WSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKAEAEKTEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANGRVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|81885787|sp|Q6PGL7.1|WASC2_MOUSE (RecName: Full=WASH complex subunit 2) HSP 1 Score: 77.7962 bits (190), Expect = 3.503e-13 Identity = 60/193 (31.09%), Postives = 93/193 (48.19%), Query Frame = 0 Query: 7 WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDEDDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 WE +E + +WS+ D +L L+ +R + ++ + L T + N+ N FL+L+NTQFIENRVYDE+ V++ L+ +EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 18 WERPWSVEEIRRSSQNWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIQETKATHCRLHNVFNDFLMLSNTQFIENRVYDEE---VEEQV----LKAEAEKAEQEKTR-EQKEIDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVDL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 199
BLAST of wash complex subunit fam21c-like vs. SwissProt
Match: gi|229485401|sp|A1ZBW7.1|WASC2_DROME (RecName: Full=WASH complex subunit 2) HSP 1 Score: 65.855 bits (159), Expect = 1.629e-9 Identity = 48/174 (27.59%), Postives = 73/174 (41.95%), Query Frame = 0 Query: 14 EAPDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFL-LLANTQFIENRVYDEDDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDLALKNGLDFLTQNLDRIKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 +APDW+ D +LA ++R+ NLE R +R E V Q DI +N T L QF+E RV + DD + + P S +E K L+N L +N + + S++ DG + T ++PY PLP +IG+ + G Sbjct: 13 QAPDWTFAGDCALLALMKRISQNLEERGERTSRNLRDFETSVKQVDIALNNATTSLRSLQFGNQFVEYRVEEVDDADLAMPEEKKKKPELPLKSSEELAKE-------FLENNLRMFRKNYEPVTIEVPDSDDEDG---PVHSTTVFRAKNPYDAIPLPYIIGTKEWQEHKYAG 176
BLAST of wash complex subunit fam21c-like vs. nr
Match: gi|1131143334|ref|XP_019787029.1| (PREDICTED: WASH complex subunit FAM21C isoform X16 [Tursiops truncatus]) HSP 1 Score: 82.8037 bits (203), Expect = 3.594e-12 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 0 Query: 3 PPVG---WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 PPV WE +E + WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+P EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 12 PPVSEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKPEAEKPEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. nr
Match: gi|594655968|ref|XP_007176360.1| (PREDICTED: WASH complex subunit FAM21C isoform X9 [Balaenoptera acutorostrata scammoni]) HSP 1 Score: 82.8037 bits (203), Expect = 3.655e-12 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 0 Query: 3 PPVG---WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 PPV WE +E + WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+P EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 12 PPVSEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKPEAEKPEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. nr
Match: gi|1348455816|ref|XP_023977219.1| (WASH complex subunit 2-like isoform X5 [Physeter catodon]) HSP 1 Score: 82.8037 bits (203), Expect = 3.891e-12 Identity = 66/202 (32.67%), Postives = 95/202 (47.03%), Query Frame = 0 Query: 3 PPVG---WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 PPV WE +E + WS+ D +L L+ +R + ++ + L TD + NI N FL+L+NTQFIENRVYDE ++P L+P EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 12 PPVSEPVWERPWSVEEIRRNSQSWSLAADAGLLRFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNIFNDFLMLSNTQFIENRVYDEEVEEPV---------LKPEAEKPEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. nr
Match: gi|594655958|ref|XP_007176355.1| (PREDICTED: WASH complex subunit FAM21C isoform X4 [Balaenoptera acutorostrata scammoni]) HSP 1 Score: 82.8037 bits (203), Expect = 3.944e-12 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 0 Query: 3 PPVG---WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 PPV WE +E + WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+P EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 12 PPVSEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKPEAEKPEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200
BLAST of wash complex subunit fam21c-like vs. nr
Match: gi|594655954|ref|XP_007176353.1| (PREDICTED: WASH complex subunit FAM21C isoform X2 [Balaenoptera acutorostrata scammoni]) HSP 1 Score: 82.8037 bits (203), Expect = 4.049e-12 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 0 Query: 3 PPVG---WEALARIE-----APDWSVLDDPRILAALERLGTNLENRAQRLWEKFEKLEDRVAQTDIKFDNITNQFLLLANTQFIENRVYDE--DDPCVDDDFPAGQLRPHPAPSEQETRKANQDQLDL------ALKNGLDFLTQNLDR--IKFGAMGSEELDGSDMAMLQKTRLEGRHPYHMRPLPPLIGSAAYLAGDLIG 186 PPV WE +E + WS+ D +L L+ +R + ++ + L TD + N+ N FL+L+NTQFIENRVYDE ++P L+P EQE + Q ++DL A+ GL L ++ IK G SEE D ++ L LE + Y RPLP LIGS ++ + +G Sbjct: 12 PPVSEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPV---------LKPEAEKPEQEKTR-EQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVEL---ILEPKDLYIDRPLPYLIGSKLFMEQEDVG 200 The following BLAST results are available for this feature:
BLAST of wash complex subunit fam21c-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of wash complex subunit fam21c-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of wash complex subunit fam21c-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold352_size199037:45631..52858+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold352_size199037-snap-gene-0.31 ID=maker-scaffold352_size199037-snap-gene-0.31|Name=wash complex subunit fam21c-like|organism=Tigriopus kingsejongensis|type=gene|length=7228bp|location=Sequence derived from alignment at scaffold352_size199037:45631..52858+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wash complex subunit fam21c-like' has the following synonyms
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