glutamate-gated chloride channel alpha partial, maker-scaffold357_size197762-snap-gene-0.41 (gene) Tigriopus kingsejongensis

Overview


Name	glutamate-gated chloride channel alpha partial
Unique Name	maker-scaffold357_size197762-snap-gene-0.41
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5")

HSP 1 Score: 476.478 bits (1225), Expect = 4.288e-164
Identity = 228/236 (96.61%), Postives = 230/236 (97.46%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG 404
            DV  EYSVQVTFREQWNDERLRYYD++ G LKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIY WKEKDPVQVVPGLHLPRFTLEQYKSAYCDV TNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG
Sbjct:   56 DVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG 291

HSP 2 Score: 129.028 bits (323), Expect = 2.375e-32
Identity = 83/196 (42.35%), Postives = 102/196 (52.04%), Query Frame = 0

Query:  475 RGSIGGATTLSGANSHQGMNHIGSAVD-IDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRS---NEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLFAKSKSPQLE 666
            R S+G  T L+ +    G+N     V     I  +  KKR      N   +  G   Y+ TT+YPHQ  S   + ++  GG  + YN+  P              CE+H           H   +A    G   +    C +  CC TRGLL+KFPSRAKRIDVISRFIFPLIFAIFN+AYWLYYLFAKSKSPQLE
Sbjct:  255 RVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGKKRNSEYRNNIRVDPXGDLVYKSTTSYPHQYNSMYPHHNILSGGPPNSYNSATP--------------CEIHXPV-------EHLQAYANSRNG--EIDEKNCNWY-CCKTRGLLAKFPSRAKRIDVISRFIFPLIFAIFNLAYWLYYLFAKSKSPQLE 426

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20")

HSP 1 Score: 346.28 bits (887), Expect = 3.431e-112
Identity = 169/315 (53.65%), Postives = 213/315 (67.62%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDE-----------------------------SQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPR-FTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-DRARERMERARRQWELENADME 452
            DV  EYS Q+T R+QWND RLR+ D+                              + +++YLT+TD +KVWM DTFF NEK  R H I+  N+YVR+FPNG++LYSIR+SLT AC M L L+PLDKQ C L +ASYGW  +DLIYQWKE +PVQ+V  L LP  F L+ + +  CDV   TG YSCL+VE+ F R+ S+Y++TIY+PC M+V+VSW+SFW+D  A+PARVSLG+T LL MST  + IN+ LPPV+YTKAIDVW GVC  FVF ALLE+ALVNYASRSD QR  + +E  ER   Q       +E
Sbjct:   90 DVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYASRSDAQRAAKQKEAKERELEQCAFSTERIE 404

HSP 2 Score: 51.6026 bits (122), Expect = 5.211e-7
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0

Query:  624 KFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYL 656
            +F  RAK+IDVISRF+FP  FA FN+ YW YYL
Sbjct:  470 RFQFRAKKIDVISRFLFPSTFAFFNILYWSYYL 502

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000009520 (supercontig:LSalAtl2s:LSalAtl2s612:286575:292619:1 gene:EMLSAG00000009520 transcript:EMLSAT00000009520 description:"maker-LSalAtl2s612-augustus-gene-3.13")

HSP 1 Score: 271.166 bits (692), Expect = 4.502e-87
Identity = 129/215 (60.00%), Postives = 159/215 (73.95%), Query Frame = 0

Query:  257 MDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTG-------------------EYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADME 452
            MDL+LYPLD+QVC ++IASYGW  DDLIY+WK KDPVQ V  L+LPRF LE + ++YC+  TNTG                   EYSCLK+ L+FKREFSYYL+TIYVP CMLVI+SWVSFWLD  ++PARV+LGVTTLLTMSTQT+G+N  LPPV+YTKAIDVW+G C  FVF ALLEFA VNYASR     DR + R  R+   + +++ +++
Sbjct:    1 MDLKLYPLDRQVCEMRIASYGWTTDDLIYRWKSKDPVQFVQDLNLPRFKLESFSTSYCNSKTNTGSVILYTEFPIVKLVFFNSGEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVNRSLPPVAYTKAIDVWSGACVIFVFSALLEFAFVNYASR----HDRRKGRKSRSAMNYNMDDDEID 211

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11")

HSP 1 Score: 250.366 bits (638), Expect = 2.599e-75
Identity = 178/604 (29.47%), Postives = 267/604 (44.21%), Query Frame = 0

Query:   95 PQEKGGRKTEVNYHVEILSLDDIRELGMSLNLQFRLTLSWLDPRIIYHNLKACRTPLKSVSDLKASVEEHWAAMDVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVN--YASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDID-------------GIPGFPLKKRGGH---NFANALREMDGGEPYRGTTTY--------PHQNR-------SNEDLSYGGMNSGY----------NTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYY 655
            P +  G  TEV +HV ++SLD I E  M+                                                  Y+  V F + W D RLR  D      + L +    K+W PD+FF+N K      + +PN Y+ ++ +  ILY ++++L L+CPM  + YP D Q C L+I S     DDLI+ W ++ P+ V  G+ LP+  L   KS  C  + +TG+++CL+V   FKR   YYL   YVP C++VI+SW+SFW+   A+PARV+LGVT+LLT+STQ +     LPPVSY KAIDV+   C  FVF +L+E+ALVN      +D+++ ++R           + N                 ++G  G  +R ++ G  T S   +       G+ V  D             G  G  + +  GH   +  N  R+++  +PY G  T         P QN        SN + + GG  S Y          N+ QP+S       D+G    +H N+                  G  +L+ H          R L+ K   +A  +D ISR++FP  F + N+ YW  +
Sbjct:   13 PPKYKGNATEVLFHVTVMSLDTIDESSMT--------------------------------------------------YTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSRG----------ISNL----------------ILGTRGINVRSNLKGGQTASMMPAETIATKFGNDVSRDKSFSTFLPNSNSIGDNGNSVPR--GHTCVHLRNPSRQINHIDPYTGNPTGDSGYGDIPPVQNEPYFVSQESNGNGTDGGDISEYSNNSSSHPRINSHQPASPPPPPNGDIG---GLHNNN-------------VISQQGMKNLV-HDVQLKRQKEIRDLMKKKREKAVLVDRISRWLFPTSFILLNLVYWALF 521

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000004920 (supercontig:LSalAtl2s:LSalAtl2s259:1063168:1099810:-1 gene:EMLSAG00000004920 transcript:EMLSAT00000004920 description:"maker-LSalAtl2s259-augustus-gene-11.12")

HSP 1 Score: 227.639 bits (579), Expect = 3.219e-69
Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 0

Query:  204 LTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLP-RFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNA 364
            +TD  KVWMPDTFFRNEKE + H II PN+Y+R+FPNG+ILYSIRISLTL+CPM L L+PLD Q C L++ASYGW  DD++Y WK  +PVQ V  L LP  F L  +  AYC+V T TGEYSCL V + F+R+ SYY+ITIY+P  M+V+VSW+SFWLD  +
Sbjct:    1 MTDSKKVWMPDTFFRNEKEGKFHNIIQPNLYIRVFPNGDILYSIRISLTLSCPMSLELFPLDTQTCFLRVASYGWTVDDVVYNWKVPEPVQFVKNLFLPGGFGLHXFSDAYCNVKTATGEYSCLTVIMTFRRQLSYYIITIYIPTLMIVMVSWMSFWLDHKS 162

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3")

HSP 1 Score: 221.861 bits (564), Expect = 1.062e-66
Identity = 114/263 (43.35%), Postives = 154/263 (58.56%), Query Frame = 0

Query:  173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDP-----VQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSD 427
            +Y      R++W+D RL + D        L L  P     +W P+ FF N KEA    + VPNV +RI PNGEILY +R+ L  +C M+L  YPLD Q+C +QI+S+     +L+ +W   DP     V V   L +P+F + +  +  C    + G YSCL  E    R   ++LI  Y+P  ++V +SWVSFW+D + +PARV+LGV TLLT+S+Q SG    +P  SY KAIDVW GVC  FVF AL+EF LVNY  R D
Sbjct:    2 DYVTDTYLRQKWSDSRLSHPDIKSP----LDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEW---DPTHELSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSG--TSVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYLWRKD 255

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000002530 (supercontig:LSalAtl2s:LSalAtl2s14:125553:213163:-1 gene:EMLSAG00000002530 transcript:EMLSAT00000002530 description:"maker-LSalAtl2s14-augustus-gene-3.12")

HSP 1 Score: 202.216 bits (513), Expect = 4.261e-60
Identity = 88/125 (70.40%), Postives = 106/125 (84.80%), Query Frame = 0

Query:  197 GRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTG 321
             ++KYLT+TD  KVWMPDTFFRNEKE R H I+VPNVY+RIFPNG++LYSIR+SLTLACPM+L+LYPLD+Q C L++ASYGW  DDL Y WK  +PVQ+V  LHLPRFTLE+Y S YC++ TNTG
Sbjct:   86 AKIKYLTMTDAKKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTDDLQYIWKPSEPVQIVKDLHLPRFTLEKYISDYCNIKTNTG 210

HSP 2 Score: 69.707 bits (169), Expect = 2.671e-13
Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0

Query:  566 YMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLFAKSKS 662
            + L + +   C +  N   TG+G  +G    + ++       H   +      +  L+KFPSRAK+IDVISR IFP IFAIFNM+YW YYL  +++S
Sbjct:  193 FTLEKYISDYCNIKTN---TGAGSHNGSEPNSMISKLHQCEIHMRPHRRQNFLQAWLNKFPSRAKKIDVISRVIFPAIFAIFNMSYWSYYLLQEAQS 286

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58")

HSP 1 Score: 207.608 bits (527), Expect = 9.016e-60
Identity = 101/252 (40.08%), Postives = 156/252 (61.90%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTD--PTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFA 418
            +V  +Y++ +   + W DERL +  E     K LTL+     K+W+PDTFF N+K +  H++   N  VR+  +G I Y +R + TLAC MDL  YPLD Q C ++I SYG+   D++  W++K PV  V    LP+FT+  +++    +   TG Y  L +    +R   Y++   Y+P  ++V++SWVSFW++  A  ARV+LG+TT+LTM+T ++G+ + LP +SY KAID++  +C  FVF ALLE+A
Sbjct:  120 EVSMDYTITMYLNQYWKDERLSFSTEED---KVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQK-PVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 367

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6")

HSP 1 Score: 190.274 bits (482), Expect = 2.123e-53
Identity = 102/275 (37.09%), Postives = 153/275 (55.64%), Query Frame = 0

Query:  176 VQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKV---WMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIAS----------------------YGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASR 425
            + +  R+ W D RL +     G L+ + L DP  V   W P+ +F N K+A    + VPNV VRI P G ILY +R+ L  +C M+L  +PLD+Q C ++IAS                            +LI +WK+  P+ +   + +P+F +     + C    + G YSCL  +L  KR   ++++  Y+P  ++V++SWVSFW+D  ++  R +LGVTTLLT+S++ S + A++P VSY KAID+W G C  F+F ALLEF  VNY  R
Sbjct:   54 IDLYLRQHWFDSRLNH----PGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYMWR 324

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BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000000070 (supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-1 gene:EMLSAG00000000070 transcript:EMLSAT00000000070 description:"maker-LSalAtl2s100-snap-gene-5.24")

HSP 1 Score: 166.392 bits (420), Expect = 6.107e-47
Identity = 82/219 (37.44%), Postives = 129/219 (58.90%), Query Frame = 0

Query:  171 DYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQW--KEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGIN 387
            D  Y+  V F ++W D RL   D      + L +     +W PD+FF+N K+     + +PN Y+ ++ +  ILY ++++L L+CPM+   YP D+Q C L +       DDLI+ W  ++K P+ V  G+ LP+  L    +  C  + +TG ++CL+V   F+R   YYL   Y+P C++V++SW+SFW+   A  ARV+LGVT+LLT+STQ + IN
Sbjct:   13 DITYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSFFKNAKKVTFQTMTIPNHYLWLYKDKTILYMVKLTLLLSCPMNFENYPHDEQNCKLSMEM-SHTTDDLIFIWLPEDKTPLAVDNGIQLPQLELVSNDTGDCTSVYSTGNFTCLEVIFKFRRRLGYYLFHTYIPTCLIVMMSWISFWIKPEAXXARVTLGVTSLLTLSTQHANIN 230

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BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|1346173|sp|P48167.1|GLRB_HUMAN (RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine receptor 58 kDa subunit; Flags: Precursor)

HSP 1 Score: 216.468 bits (550), Expect = 1.545e-61
Identity = 117/348 (33.62%), Postives = 206/348 (59.20%), Query Frame = 0

Query:  125 NLQFRLTLSWLDPRIIYHNLKACRTPLKSVSDLKASVEEHWAAMDVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTK---VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVIT---NTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHV 466
            N+  RL +S+ DPRI   N K    P+  V ++   +    +  +   +Y V +  R++WND RL+   + +G    LT+ DPT    +W PD FF NEK A  H++   N+ + IF +G++L S+R+S+TL+CP+DL L+P+D Q C +Q+ S+G+  DDL + W+  DPVQ+   + LP+F +++    Y +       TG Y+C++V    +R+  +Y++ +Y P  ++V++SW+SFW++ +A  ARV LG+ ++L+++++ + + A+LP VSY KA+DVW   C  F F +L+E+A+V     +  + +  + R+ +A  Q + +  ++       GT  P H+
Sbjct:   58 NILNRLLVSY-DPRI-RPNFKG--IPVDVVVNI--FINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGS-DALTV-DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIAKA-EQADGKGGNVAKKNTVNGTGTPVHI 395

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BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|121604|sp|P20781.1|GLRB_RAT (RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine receptor 58 kDa subunit; Flags: Precursor)

HSP 1 Score: 216.083 bits (549), Expect = 2.207e-61
Identity = 117/348 (33.62%), Postives = 205/348 (58.91%), Query Frame = 0

Query:  125 NLQFRLTLSWLDPRIIYHNLKACRTPLKSVSDLKASVEEHWAAMDVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTK---VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVIT---NTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHV 466
            N+  RL +S+ DPRI   N K    P+  V ++   +    +  +   +Y V +  R++WND RL+   + +G    LT+ DPT    +W PD FF NEK A  H++   N+ + IF +G++L S+R+S+TL+CP+DL L+P+D Q C +Q+ S+G+  DDL + W+  DPVQ+   + LP+F +++    Y +       TG Y+C++V    +R+  +Y++ +Y P  ++V++SW+SFW++ +A  ARV LG+ ++L+++++ + + A+LP VSY KA+DVW   C  F F +L+E+A+V     +  + +  + R+ +A  Q + +  +        GT  P H+
Sbjct:   58 NILNRLLVSY-DPRI-RPNFKG--IPVDVVVNI--FINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGS-DALTV-DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIAKA-EQADGKGGNAAKKNTVNGTGTPVHI 395

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BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|1730183|sp|P50571.1|GBRB1_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor)

HSP 1 Score: 215.312 bits (547), Expect = 2.230e-61
Identity = 124/357 (34.73%), Postives = 194/357 (54.34%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTD--PTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKD-PVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNY-----------ASRSDMQRDRARERMERARRQWELEN----ADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPG 507
            +V+ +Y++ + F++ W D+RL Y     G    LTL +    ++W+PDT+F N+K++  H + V N  +R+ P+G +LY +RI+ T AC MDLR YPLD+Q C L+I SYG+  DD+ + W   +  V  V  + LP+F++  YK     V   TG Y  L +    KR   Y+++  Y+P  ++ I+SWVSFW++ +A  ARV+LG+TT+LTM+T ++ +   LP + Y KAID++   C  FVF ALLE+A VNY           AS+ D Q    + R+E  + Q +       + +E     +G+   T V  P   +              +S +G    G  +D  G+PG
Sbjct:   77 EVNMDYTLTMYFQQSWKDKRLSY----SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQD-QSANEKNRLEMNKVQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREGF---GRGLDRHGVPG 425

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|341940753|sp|P48168.2|GLRB_MOUSE (RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine receptor 58 kDa subunit; Flags: Precursor)

HSP 1 Score: 216.083 bits (549), Expect = 2.347e-61
Identity = 117/348 (33.62%), Postives = 205/348 (58.91%), Query Frame = 0

Query:  125 NLQFRLTLSWLDPRIIYHNLKACRTPLKSVSDLKASVEEHWAAMDVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTK---VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVIT---NTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHV 466
            N+  RL +S+ DPRI   N K    P+  V ++   +    +  +   +Y V +  R++WND RL+   + +G    LT+ DPT    +W PD FF NEK A  H++   N+ + IF +G++L S+R+S+TL+CP+DL L+P+D Q C +Q+ S+G+  DDL + W+  DPVQ+   + LP+F +++    Y +       TG Y+C++V    +R+  +Y++ +Y P  ++V++SW+SFW++ +A  ARV LG+ ++L+++++ + + A+LP VSY KA+DVW   C  F F +L+E+A+V     +  + +  + R+ +A  Q + +  +        GT  P H+
Sbjct:   58 NILNRLLVSY-DPRI-RPNFKG--IPVDVVVNI--FINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGS-DALTV-DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIAKA-EQADGKGGNAAKKNTVNGTGTPVHI 395

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|120769|sp|P15431.1|GBRB1_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor)

HSP 1 Score: 214.157 bits (544), Expect = 6.231e-61
Identity = 123/357 (34.45%), Postives = 194/357 (54.34%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTD--PTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKD-PVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNY-----------ASRSDMQRDRARERMERARRQWELEN----ADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPG 507
            +V+ +Y++ + F++ W D+RL Y     G    LTL +    ++W+PDT+F N+K++  H + V N  +R+ P+G +LY +RI+ T AC MDLR YPLD+Q C L+I SYG+  DD+ + W   +  V  V  + LP+F++  YK     V   TG Y  L +    KR   Y+++  Y+P  ++ I+SWVSFW++ +A  ARV+LG+TT+LTM+T ++ +   LP + Y KAID++   C  FVF ALLE+A VNY           AS+ D Q    + ++E  + Q +       + +E     +G+   T V  P   +              +S +G    G  +D  G+PG
Sbjct:   77 EVNMDYTLTMYFQQSWKDKRLSY----SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQD-QSANEKNKLEMNKVQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREGF---GRGLDRHGVPG 425

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BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1253728498|ref|XP_022650818.1| (glutamate-gated chloride channel-like isoform X3 [Varroa destructor])

HSP 1 Score: 452.21 bits (1162), Expect = 6.288e-149
Identity = 242/489 (49.49%), Postives = 301/489 (61.55%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            DV  EY+VQ+TFR+QW DERL+Y D+  G+++YLTLTD  K+W PD FF NEKE   H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+  +DL++ WKE DPVQV   LHLPRFTLE++ + YC   TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD  +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD +R    ++  + R++W                            LL  SI  A      N+   ++H   A        F +  +GG           G E  RG             ++   + +  +   P   ++  P    R CEVHM                    G SS   + C        R  LS+FP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:  133 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 529

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1268022802|ref|XP_022711229.1| (glutamate-gated chloride channel-like isoform X2 [Varroa jacobsoni])

HSP 1 Score: 451.825 bits (1161), Expect = 8.603e-149
Identity = 242/489 (49.49%), Postives = 301/489 (61.55%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            DV  EY+VQ+TFR+QW DERL+Y D+  G+++YLTLTD  K+W PD FF NEKE   H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+  +DL++ WKE DPVQV   LHLPRFTLE++ + YC   TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD  +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD +R    ++  + R++W                            LL  SI  A      N+   ++H   A        F +  +GG           G E  RG             ++   + +  +   P   ++  P    R CEVHM                    G SS   + C        R  LS+FP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:  132 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 528

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|662488950|gb|AIE48262.1| (glutamate-gated chloride channel alpha subunit, partial [Cochliomyia hominivorax])

HSP 1 Score: 446.047 bits (1146), Expect = 1.322e-148
Identity = 216/310 (69.68%), Postives = 248/310 (80.00%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474
            D   EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+  +VWMPD FF NEKE   H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+QVC L++ASYGW  +DL++ WKE DPVQVV  LHLPRFTLE++ + YC+  TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD   D  +E M++ RR  E  + D       T +N  T  M P    PG+ L
Sbjct:   77 DYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASIDAASDLLDTDSNA-TFAMKPLVRHPGDPL 384

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BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1078802870|ref|XP_018494231.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate-gated chloride channel-like [Galendromus occidentalis])

HSP 1 Score: 451.055 bits (1159), Expect = 2.594e-148
Identity = 242/489 (49.49%), Postives = 298/489 (60.94%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            DV  EY+VQ+TFR+QW DERL+Y D+  G+++YLTLTD  K+W PD FF NEKE   H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+  +DL++ WKE DPVQV   LHLPRFTLE++ + YC   TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD  +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD +R    ++  + R++W                            LL  SI  A      N+   ++H   A  +                        G E   G  T P+                 +   P   ++  PQ++ R CEVHM       GP   G                    LC   R  LS+FP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:  153 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNTHKQATQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEAFAM------------------------GNERGLGRNTLPNDA---------------DILVPRQRTHTAPQEL-RQCEVHMK------GPSSTGSN------------------LC---RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 542

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|662488946|gb|AIE48260.1| (glutamate-gated chloride channel alpha subunit, partial [Cochliomyia hominivorax])

HSP 1 Score: 446.432 bits (1147), Expect = 5.774e-148
Identity = 216/310 (69.68%), Postives = 249/310 (80.32%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474
            D+  EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+  +VWMPD FF NEKE   H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+QVC L++ASYGW  +DL++ WKE DPVQVV  LHLPRFTLE++ + YC+  TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD   D  +E M++ RR  E  + D       T +N  T  M P    PG+ L
Sbjct:   76 DIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASIDAASDLLDTDSNA-TFAMKPLVRHPGDPL 383

HSP 2 Score: 64.3142 bits (155), Expect = 4.603e-7
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0

Query:  615 CCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            CC T   LSKFP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:  403 CCKT--WLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLF 443

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|665394500|ref|NP_001287409.1| (GluClalpha, isoform O [Drosophila melanogaster] >gi|599127838|gb|AHN57408.1| GluClalpha, isoform O [Drosophila melanogaster])

HSP 1 Score: 446.047 bits (1146), Expect = 9.475e-148
Identity = 216/310 (69.68%), Postives = 249/310 (80.32%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474
            DV  EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+  +VWMPD FF NEKE   H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW  +DL++ WKE DPVQVV  LHLPRFTLE++ + YC+  TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD   D  +E M++ RR  E  + D       T +N  T  M P    PG+ L
Sbjct:   78 DVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASLDAASDLLDTDSNA-TFAMKPLVRHPGDPL 385

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1314955641|ref|XP_023179073.1| (glutamate-gated chloride channel isoform X17 [Drosophila hydei])

HSP 1 Score: 444.121 bits (1141), Expect = 1.595e-147
Identity = 214/310 (69.03%), Postives = 250/310 (80.65%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-DRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGS 477
            D   EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+  +VWMPD FF NEKE   H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW  +DL++ WKE DPVQVV  LHLPRFTLE++ + YC+  TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRS + + +  +E M++ RR  E  + D       T +N  T  MG    LLRG+
Sbjct:   79 DYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGLNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNA-TFAMGQE-RLLRGA 385

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1253728514|ref|XP_022650824.1| (glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728518|ref|XP_022650825.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728521|ref|XP_022650826.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728525|ref|XP_022650827.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1268022821|ref|XP_022711236.1| glutamate-gated chloride channel-like isoform X7 [Varroa jacobsoni] >gi|1268022823|ref|XP_022711237.1| glutamate-gated chloride channel-like isoform X7 [Varroa jacobsoni])

HSP 1 Score: 445.662 bits (1145), Expect = 1.797e-147
Identity = 242/493 (49.09%), Postives = 301/493 (61.05%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARE----RMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            DV  EY+VQ+TFR+QW DERL+Y D+  G+++YLTLTD  K+W PD FF NEKE   H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+  +DL++ WKE DPVQV   LHLPRFTLE++ + YC   TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD  +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD +R    +    +  + R++W                            LL  SI  A      N+   ++H   A        F +  +GG           G E  RG             ++   + +  +   P   ++  P    R CEVHM                    G SS   + C        R  LS+FP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:   60 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQSVPQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 460

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1268022818|ref|XP_022711235.1| (glutamate-gated chloride channel-like isoform X6 [Varroa jacobsoni])

HSP 1 Score: 446.047 bits (1146), Expect = 3.197e-147
Identity = 242/493 (49.09%), Postives = 301/493 (61.05%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARE----RMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657
            DV  EY+VQ+TFR+QW DERL+Y D+  G+++YLTLTD  K+W PD FF NEKE   H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+  +DL++ WKE DPVQV   LHLPRFTLE++ + YC   TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD  +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRSD +R    +    +  + R++W                            LL  SI  A      N+   ++H   A        F +  +GG           G E  RG             ++   + +  +   P   ++  P    R CEVHM                    G SS   + C        R  LS+FP+R+KRIDVISR  FPL+FA+FN+ YW  YLF
Sbjct:   86 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQSVPQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 486

[Close]

BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1037102272|ref|XP_017084832.1| (PREDICTED: glutamate-gated chloride channel isoform X6 [Drosophila eugracilis])

HSP 1 Score: 441.425 bits (1134), Expect = 4.672e-147
Identity = 208/299 (69.57%), Postives = 242/299 (80.94%), Query Frame = 0

Query:  169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-----DRARERMERARRQWELENADMEPSPPPTGTNG 462
            D+  EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+  +VWMPD FF NEKE   H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW  +DL++ WKE DPVQVV  LHLPRFTLE++ + YC+  TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC  FVF ALLEFALVNYASRS   +     D  +E M++ RR  E  + D       T +N 
Sbjct:   78 DIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANRAADMHKENMKKKRRDLEQASLDAASDLLDTDSNA 375

The following BLAST results are available for this feature:

BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
BLAST of glutamate-gated chloride channel alpha partial vs. nr

BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011971	4.288e-164	96.61	supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1...	[more]
EMLSAG00000006195	3.431e-112	53.65	supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-...	[more]
EMLSAG00000009520	4.502e-87	60.00	supercontig:LSalAtl2s:LSalAtl2s612:286575:292619:1...	[more]
EMLSAG00000000919	2.599e-75	29.47	supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1...	[more]
EMLSAG00000004920	3.219e-69	62.35	supercontig:LSalAtl2s:LSalAtl2s259:1063168:1099810...	[more]
EMLSAG00000010137	1.062e-66	43.35	supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 g...	[more]
EMLSAG00000002530	4.261e-60	70.40	supercontig:LSalAtl2s:LSalAtl2s14:125553:213163:-1...	[more]
EMLSAG00000009047	9.016e-60	40.08	supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-...	[more]
EMLSAG00000002942	2.123e-53	37.09	supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-...	[more]
EMLSAG00000000070	6.107e-47	37.44	supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-...	[more]

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BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1346173\|sp\|P48167.1\|GLRB_HUMAN	1.545e-61	33.62	RecName: Full=Glycine receptor subunit beta; AltNa...	[more]
gi\|121604\|sp\|P20781.1\|GLRB_RAT	2.207e-61	33.62	RecName: Full=Glycine receptor subunit beta; AltNa...	[more]
gi\|1730183\|sp\|P50571.1\|GBRB1_MOUSE	2.230e-61	34.73	RecName: Full=Gamma-aminobutyric acid receptor sub...	[more]
gi\|341940753\|sp\|P48168.2\|GLRB_MOUSE	2.347e-61	33.62	RecName: Full=Glycine receptor subunit beta; AltNa...	[more]
gi\|120769\|sp\|P15431.1\|GBRB1_RAT	6.231e-61	34.45	RecName: Full=Gamma-aminobutyric acid receptor sub...	[more]

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BLAST of glutamate-gated chloride channel alpha partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1253728498\|ref\|XP_022650818.1\|	6.288e-149	49.49	glutamate-gated chloride channel-like isoform X3 [...	[more]
gi\|1268022802\|ref\|XP_022711229.1\|	8.603e-149	49.49	glutamate-gated chloride channel-like isoform X2 [...	[more]
gi\|662488950\|gb\|AIE48262.1\|	1.322e-148	69.68	glutamate-gated chloride channel alpha subunit, pa...	[more]
gi\|1078802870\|ref\|XP_018494231.1\|	2.594e-148	49.49	PREDICTED: LOW QUALITY PROTEIN: glutamate-gated ch...	[more]
gi\|662488946\|gb\|AIE48260.1\|	5.774e-148	69.68	glutamate-gated chloride channel alpha subunit, pa...	[more]
gi\|665394500\|ref\|NP_001287409.1\|	9.475e-148	69.68	GluClalpha, isoform O [Drosophila melanogaster] >g...	[more]
gi\|1314955641\|ref\|XP_023179073.1\|	1.595e-147	69.03	glutamate-gated chloride channel isoform X17 [Dros...	[more]
gi\|1253728514\|ref\|XP_022650824.1\|	1.797e-147	49.09	glutamate-gated chloride channel-like isoform X6 [...	[more]
gi\|1268022818\|ref\|XP_022711235.1\|	3.197e-147	49.09	glutamate-gated chloride channel-like isoform X6 [...	[more]
gi\|1037102272\|ref\|XP_017084832.1\|	4.672e-147	69.57	PREDICTED: glutamate-gated chloride channel isofor...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold357_size197762	supercontig	scaffold357_size197762:81659..90085 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold357_size197762-snap-gene-0.41-mRNA-1	maker-scaffold357_size197762-snap-gene-0.41-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold357_size197762:81659..90085+

gene from alignment at scaffold357_size197762:81659..90085+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold357_size197762-snap-gene-0.41 ID=maker-scaffold357_size197762-snap-gene-0.41|Name=glutamate-gated chloride channel alpha partial|organism=Tigriopus kingsejongensis|type=gene|length=8427bp|location=Sequence derived from alignment at scaffold357_size197762:81659..90085+ (Tigriopus kingsejongensis)
ATGGATCCATTTGCCTATGCGTTCCACAACACCACCCAAGACTACCCACT
GGGAAAGAGGTCCTGGTACTTTGTCAACGAGTCTTGTCTGCATAATCGCT
TCCAAATTCGCCGTCTCAAGCTCACCACTTGCCAGGCTGAGTCGCAATTC
ACTTGCGACGATGGGACCTGCATCGACATTGGTGGGCGATGCGACCAGAA
GCGGGATTGCCAAGACTATTCGGACGAGTTTGACTGCAAATTGGTCGCGC
TCAACCAATTCCATTACATCAAAGATTATGCCCCGCAAGAGAAAGGTGGA
CGCAAGACGGAAGTCAATTACCACGTGGAAATTCTCTCCTTGGACGACAT
CCGCGAATTGGGCATGAGCCTGAACTTGCAATTCCGGCTGACGCTGAGTT
GGCTCGATCCAAGGATCATCTATCACAACTTGAAGGTGGGTGTTCGTCGA
TAATGGGAAAACCTTGAAACACCAACATTATCTGGACCTCGAATTTTCCA
TTCGGGAACGAGGGAGGCACTGCAATGCAATTGGGGGAAAATCCCTCAAT
CCCATGAATCGAATTCGTTTCAATTTTCTAATGCCAAAATGCAATCCTGG
CGCTTAGCGACTTGGTGGTGGCTTCTTACCGCCACAATCTTTTAATAGAA
TCGCACAATTTGCATAGATAAAGTCCTAGATCACTGAGGCCCGATGGTCG
GCGTATATGGACCAACTCCCCGGCTCCCAAATGTCTACGTATGGTTCGAA
ATATATCCCAGGAACACTACATGAGCTGCCCAACCTTTAACCAATACCAC
ACGCGGGCCGTAATTGCAATTGCTTTGTTGGTTTGATGATGGGTCCTCCG
GTTGAGGGGGTTCAAGTACGAAGAGCATTCGAATAGGAGTGTAATTCTCG
CTCATGTCTCCCATTCCTAGATTTGACAGATAGAGAGAGCTTTGGCAGAC
GTGTCAAAAAGTTTGCACTTTTTGGGCCGGAAAAGCTGGCACTCGGCTTC
CTCGAAAATTCATGGGACGAGATCATATGCGTAGGAGCCAATGCAATCGG
AAAACTCGGCCTGACATCGCTTCTCACTTCCGAGTTTTCCGATTGCATTG
GCTCCTACGCATATGATCTCGTCCCATGAATTTTCGAGGAAGCCGAGTGC
CAGCTTTTCNTGTGCACCCGAAGCAGAAAAGCCTTGAGTGACATTTTTGT
CGACCACTCGGACCAGGGGTATCCCTAATGGTTGAAAAGGGCTCGAAATG
TGCCTGAATGGCAAACCCGGAGGATGCAAGCTGTGAGAGATCGCGTGAGA
AAGTATCGACACTAAGAATGACAACCATAACTTGGGAAGAGACTGAGTGA
AGAACGGAGGCCGAACATCGGCCAACTGGCCTGAGATGGGCGGGAAAAGT
GGCTTACTTGTCGGTGCCGCCAGTGCTGGGCGAGGCTTTCAAACTCGGAT
CGAAGAAAAATGATGAATGTTCCGGCTGAAAATTCCTCGAGTGGCAGAAA
ATAAATCGTCTTTAGATGAATTCCTTTTCAAAAGTAACCGAGGCCAATGG
GGCTTAGCCGTAGCAATCCTGCCCAAGTACACTAACTCACATTCGCCGGC
CTCGTGCGATTTCGACCTCATGTGGTTGAGGACGTGACGTAATACCAATA
TATCAGTTTTTAATTAAGACAACACAGTATGCTAGAACATTGGGCATTTA
TGACTGATGTGCGCGGCCATGTCACTTTTCGGTCTGAGTGATTGATAGCT
TGGTGGTAAGATAATAAGTGAAGCCTGTCTGGTAATAATGTATGAAGTAC
GTGATTCTTCTGTTCAGGGATTGGGCCTGGCTGAATTCAGTAAAATAAGA
GCGGACAATGTTACACGCATGGGCTAGAGAGAGACATTTGAGCCTATGCG
TCCCATTGTTCCAATTTTGGGCATCTAACTCTCTGTTTAGGATAGTTTTG
TAAACAACCATTGTCTGGTTAAGTTTCGTTAACATTTTGTGTATTGTTTA
GTTCTGGAAACATTTATTGATTTGTATAGGTTGGTAAACATTCATTGTGC
TTTCCCATTATTATATTGTGTTGTTTTGTATGGTTTGTTGCAACGTTGTT
ATGTTTCTGCAGTAATATTTTGATTTGCGTTACTACTTAATATGTGTTTA
TTCTTATAAATGGCCCTAACACTATTGACTAGCATTCGTTGGCTCACGGA
TATAAAACTATTTTAGTATGTAGGAATAAACGATTACACCATATTCATAA
GTAGTACAGTGTGGTAAAGCAAATCGAAACCACACCTTATATCGCTTATA
ATTCGCGTTATAGATTAGCTAGTGAGTCAAAGGCCTGCAGGACACCTCTC
AAGAGTGTCAGCGACCTGAAGGCCTCCGTGGAGGAGCACTGGGCCGCCAT
GGACGTGGACTACGTAAGGAGGGTCTGCTCCGCCTTCATGGGCCGTGTCG
AGGCCATGGTTGAGGCAGACGGCGCCCATTTCGAAAAATAAAACATAGAT
ATCAAATAAGAAACATACTAAAAAATCAGCCTTGATACTCCACGTACTTC
TGGCCCACGTCCGTCTACATTGTACGAACGATTTTGCTTTCGATTTGCTT
TACCACACTGTAGTAAACACAACCGATTGTAGACACATTAACATGGAAAT
AAAACACACGGTTGGACACAACCAAGATGGGCGAGCACATGTTGGATCAG
ACTGTACGAGCAATGATTATGTTTGTATTGTACTGTATGCCATAACAAGA
ATTTCTTCTAGAAAGGGATATCGAAAATATTTCATTGGGCACCATAAATA
TTTATACCTTGAATCTGAAGTCCTGAATTCAACCTTATGTGGGCATTTTT
CTTATCTTGGCACATAAGTCCGAGTGGTAACATTCTAGAATTCAATAGAA
CAAGACTAACCATGATCCAAAGTAATGGTAATTGAATAATAGACTTTTTC
AACAAAAGAAATTATGTCAATGCGTTAGTTAAATGTATGAGTGATATTAT
GTGTACGTCAAATGCCTGATTCACTTTTAACTATCAGTGAATAGGGACAT
AAAAACCGCACCTGAATCGTGGTTTAGCTAGAGCTCACCATCTGTGATGT
CTCACAAAAGGTCTCCAAGGAGACTCAAGAAACTCGCACATCCTTGGATC
CAATTGCCCAATATGGGTTTGAAGCCTAAGCTTGAGACCAAACCGTAGGC
CCACATTTTACGAAAGGTCGAAGGGGCAATTGCCTAGTCCTCGGGCGTCG
TACATTCGGCATGAAAGGGCTACAAATACGGAACCACATGGCTCGGGGCG
AGTTGTTCCATTGGTGGGGTTTCTCATGTTATATGTCGGATCAGGTGCAT
GCTGGCATATCAATGTGAGATCTATCGACAGCGCCAACTAGGTCGAGGGA
ACGTGTGTCCATAGACCGAGCTATGGCTATTCATTAATAACCCCGAGATT
TGAGTCCGTTGTTTTCTCAGTCGATTTCCTCCATGCCACCAATGGGTCCA
ACGTCACTGACCATGCCACAAATACCACGGCTGCACGTTCCAGGGACAGT
GTTCGTCCAGTTTCTTCTCATGTACACTATTGGTAATTAACCCTCTTCCG
CTCCGCCTGGTCCAGAAGTCCGCGATATGTTCCTAGTTCAAAGGCGTCTT
CACCGTGCATTACATCCCTGAAGAGATTCACGCGTAAGACCTGGTGGCTG
CCCAGCCTGACAGTGTTGACAACGACCTCGACGACCGTTATGGGGGCTGC
TGCCCCTCTAACTCGTGTAATTCCATGTCCATTAAGCTATGACGACCAAT
ACAGCCGTGCAATTGCACCTTGCACTGGTTAGACTTGCCAACTAATAGTA
CACGTAGAGAGATAGAGCTGTAGTAACAGTGGATACATGTGTCTTGCAAC
TCAACCGGGTTTGCATGTTGCCACTTTCCAGTGGTGCTGGCTGGAATATC
TCGATCTAATTATCCTCGACCACTACTGACAGAGCCTGAGAAATGGCCCC
TGTTGGGCACAGACATCCAATCCTTTGGTCTCCAATGATCGCTTTTATGA
TGCGCTGGAGATCTCTCCATCACTTCGCCTTTCGAACGTACGAGCGTAAT
CCCCAACTTGGATTGAAGCGTGTAAAGTCCCCCACTAGCCTTTTGCCTGA
TGTTACATCACATCTGTGAATGGAGGTTGAAAAAGCCATGGCTGCTGGAA
AGTGTTCCCTAGACCTCAAAATTTGTCCAACTTGGTTTATTTTGGTTGTC
ATTGGTACTTATCGATCTATCCCTCTTTTCCTTGCCTCAAGACCCAAAGA
GTCCAAATGCATGCTTTACCCTCAACAACACTCATCAAGTCGCATGTTAT
TTGCGCGTTTCCCAATTTGCATGTTGATTTCAGGCATCATGGCTTCTTGG
ATTTCCTTCCCGGTAGAGCCAATTTCAGGGACTCATAGTGCTTCCAATCC
AAAAAGGCATCTTGAGGCTACGGGTGGAGATCCTAAAGAAGCCTGGCTCT
TGTATGAAGCTGATCCCAGCTTAGATGTTCTTCCCATCATTACGAGGCTT
TTAACAATCTGCTTTCGCGCTCTTTCCAGGAATACAGCGTTCAAGTAACC
TTCCGAGAGCAGTGGAACGATGAGCGGCTTCGTTACTACGACGAGTCCCA
AGGTATTTCTCGCTCCTGGCCTTTCCCTTGGCCTTTTCAAGGCCAAATGA
CTCCCCTTGAGGGCGTCGACAATGACCATGATTTTGACCATTGACTATGT
ACGGCTGATTCGTTTTCAGGGCGATTAAAATATCTCACGCTAACCGACCC
CACCAAGGTTTGGATGCCGGACACATTCTTCCGCAACGAGAAAGAAGCTC
GCAAGCACGAGATCATTGTGCCAAATGTCTACGTGAGAATATTTCCCAAT
GGCGAGATCCTCTACAGTATTCGGTAGGCCCAATCTCGGTTCACACTTGC
CATAGCTTAGATCTAGAGGACCATCCTCGTCACTGGCTTTCTAGGTGACC
CGGCTAATGAACTGCAATTTCTCTCGACTCTTCCAGTATCTCGCTGACTT
TGGCTTGTCCCATGGATCTGAGGCTTTACCCGTTGGATAAACAAGTGTGT
GTGCTCCAGATTGCCAGTTGTAAGTACCGGAACTTGGTTTCCGATTTCTA
AGGCCTAAGTGTGGAAATGAGAATGAAAACCCAATACGGCGTTTATATGT
CGCACTATAATTCGGTATGCGAATGGTCCATTCCTCGGTGGGTGGCTCCG
TTTCTGGGATTCGGTCTAGGACTGAGACCCATTGGACCGCATGGACAACT
GTTGCGGGTCTGGAAAAATGTGAATGGAATGGCTCAGAGAACACTTAAAA
TAATGGGGGAAACTTGGAATTACGCCCCATTAGACAATGGATATACGCAC
TTGGTGCCTCGACGGGTGGCGAGGTAGACTTTTCCCAACCACCCAGCGAG
GAGGGTGTTCCACGCCACAATTGGTCGAGCGAGCCTGAGGGCTGGGACCG
ACCAAATCCCTGGCAATCCTCTTAATAGATGCGTGACTATGTTCCGAGGC
ATTTAATAGCCTCTTTATTGGTCTTCCTTTTTTACTCCTCCCGTTTCCGA
CTACCCTCCGCGGTCTAACCATTTCGCGCCCAGGAGAGCGGTCTTTCGAA
GAATTGAGGCGGATCACATCCCCTTTTTGTCACTTCCGCAAATATATTCA
AGAGCCCAGCATCCTTTCAACCTTCCACAATGCTCGAGTGGTGGCCCAGG
CCTTGAGAATAATCACATTGCTTCTAGCCAAGTTGTGCCAATTTGGCCTG
TCCCCTTGACTCGCAAACAACATAGTACACACAACTTTTCTTGTGTGTTG
GTCCAATTGCATTTGTATAATTTACTGCGGGTCAGTTCAACCCAAGGCCA
CCCTACATCACATACTGTCAACCACAGGAGACACCTTGGGATGACCCACC
GGAATTGGAGCACGTCGACAAGCGTGGACCCATCCAAGCACTTCAGGGAG
ATGATTGTGTGTCCCTGAATGTCAGCGTTTCAAGTGCTCAGGAATACAGG
GGTCAAAATAATTGGATGGCACACTGTAGAAAATTATTTAGGGTCCACCG
ATGACCCCCATTCCACAAATAAGTGACATTTCCAGAAAATTGAGGCGAAG
AGGGCGTAGAGGAGGAGGAGGAGGAATAGCTCAACCGATTCGTTTGCCAT
CGAGGCATGAATTGGATTGGGGCCAAATTTTGATTCTTGTCTATCATTGG
AATGGTGCAGTCCTTCCTTTGGAGCTTACTGTACGTACATAAATCTAAAT
GTATCCTGCCTTGCTTCGCAGATGGATGGGCCAAGGATGACCTAATTTAT
CAGTGGAAAGAAAAAGACCCCGTGCAAGTGGTGCCTGGACTTCATTTGCC
CAGATTCACTTTGGAACAATACAAGAGTGCCTATTGTGACGTCATCACCA
ACACAGGTACACTCACGCCCGTCTATGATTTATTCAAGGGCCATGCTAAC
ACACCTAGACGCCCTTGTCACCATGAATCAATCCCATGCTTCTGCTCCAA
TTCTCAGGTGAATACAGTTGCCTCAAAGTGGAGCTCATCTTCAAGAGGGA
GTTCTCCTATTATCTCATTACCATATACGTCCCCTGCTGCATGCTCGTCA
TCGTCTCTTGGGTGAGCTTTTGGCTCGACCAAAACGCAATTCCCGCCCGG
GTGTCTTTAGGCGTGACCACCCTCTTGACCATGTCCACCCAGACGTCGGG
CATCAACGCTCAGCTCCCACCCGTCTCCTACACCAAGGCCATCGACGTTT
GGACCGGGGTAAGCTTTTTTCGTCGACCATTCTGGTCAACTCTCCCAGGC
CCCCTCGTGTCTTGGTGGTGCAATCAGGGAGGGCTATATCCCGTTGGCCT
TGAGCCACGCAACTGTCAGCGCTACCATCTACGATTACTTACTGGATCGG
CCATGTCATAGGTCTCCCAGTGGGGGTCTGGGAAAGTCATATTCATCTTG
TGCCATGTACACTATGGGGCTGACGTGGGTTTCAATAGGTCCTTGATGAC
TCAAGTTGTCTAATGCCTTTTTTCGCTGCTCCCACACAGGTGTGCCAATG
CTTCGTGTTTTGTGCTCTTTTGGAATTTGCCCTCGTCAACTACGCATCCA
GATCTGACATGCAACGTGATAGAGCCCGTGAACGCATGGAACGGGCCAGA
CGTCAGTGGGAGTTGGAGAATGCGGATATGGAGCCATCCCCCCCTCCAAC
CGGGACCAATGGACCCACCCACGTCATGGGGCCACCCGGTAACCTATTGC
GAGGATCCATTGGCGGTGCCACGACCCTAAGTGGAGCCAATTCCCATCAA
GGCATGAATCACATCGGTTCAGCCGTCGACATCGACGGTATTCCTGGTTT
TCCATTGGTAATTTCTCACGCTTTTTGACATTGAAACATTAGCATACCCT
GCCCTAGGACGAGGGGGGGAATGCAGAATTTTGACGGGAACCATCACAGC
TTGGCTGTAACGGTGTAGGAATGGGATGGATAGGGATAGGCTTTGTTTTC
ATACCATTTTGTTTCAGCCGTAGATGGAGTAAGTTGGACGGTGGATTGAA
ACTGACTAAACTTGAGTTGTAGTGACTTATTCAGCCTCCCGGCTCGCCAC
CCATCGCCAATACTATGCGTCGATTGTGCACCCAAGATTTTTGTAGTCTG
AGGGATTTTTGCTCTTCCACGATGATCAGTGCACATATTTCCCAATATCT
TATGTATGACCAGGAGCCATCACAGTTTGACCCAAACGAGTGGAATGCCA
TGGTCACTTGTGCAATTTGTGGGGCAGGAGGCAGACTTAAGTGTTTAAGA
GCCTACATGATAAAAGAAACTTGATCATAGTGCCCAAGTAGATGGAACGC
TAAAACGCAATCATATTTGGTAAACCCGATTTGTTGTTTTTTTGCAGAAA
AAACGTGGCGGTCACAATTTTGCCAACGCTCTCCGTGAAATGGACGGAGG
GGAGCCTTATCGGGGAACCACGACTTACCCGCATCAGAACCGAAGCAATG
AAGACCTGAGCTATGGCGGGATGAACTCGGGCTACAATACCACGCAACCC
TCCTCCCTTTCCTACATGCTACCCCAGGATATGGGACGGACGTGTGAGGT
GCATATGAACTCCTATCCAACCGGGAGTGGCCCCGGGCATGGCGGAGGCT
TTGCTGCCGGCATGACGGGCACCAGCAGTTTGATAGGGCACACCTGTACC
TACTTGCTGTGCTGTGGCACGCGAGGATTGCTCTCCAAATTTCCGTCGCG
AGCCAAGCGAATCGACGTCATATCTAGGTTCATCTTCCCGCTGATTTTTG
CCATTTTCAATATGGCCTATTGGCTCTACTATCTATTTGCCAAGAGCAAA
AGCCCCCAATTGGAAGAAGACAATTGA

Synonyms

The feature 'glutamate-gated chloride channel alpha partial' has the following synonyms


Synonym
Tk03729

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