glutamate-gated chloride channel alpha partial, maker-scaffold357_size197762-snap-gene-0.41 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000003313 (supercontig:LSalAtl2s:LSalAtl2s181:399664:401012:-1 gene:EMLSAG00000003313 transcript:EMLSAT00000003313 description:"maker-LSalAtl2s181-augustus-gene-4.10") HSP 1 Score: 105.916 bits (263), Expect = 1.294e-24 Identity = 71/268 (26.49%), Postives = 124/268 (46.27%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRY--YDES----QGRLKYLTLTDPTKV----WMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDV-------ITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFAL 419 DVD+ ++ F +W D+RLR Y+ S + +K ++ +K+ W+ D N ++ V I N E++YS+ +T+ C M +P+D QVC Q+ S+ + + +I+ +P + T Y+ + D+ + YS ++I R+ S+Y++T Y+P + V+VSW+SF ++ IP R++L VT L + + I P AI+ W C FVF AL E+ + Sbjct: 69 DVDFSITLNAYFYVKWVDKRLRILSYNSSDINRKPHMKKQSIAINSKIIEKLWLXDVEILNLSSFETLSVLSKLEGVWIGENSELMYSLATRITIICRMKFNAFPMDIQVCKFQVGSFNYDMNKMIFF------NDFIPSKQNSQQTTLDYQVNFQDLRPDETHYLALGMNYSVAGFQIILTRKVSFYIVTYYLPSALFVLVSWISFLVNPEVIPGRMTLLVTIFLVLINIFNTIQTNSPKADGLTAIEAWVIACIIFVFGALGEYTV 330
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000011211 (supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1 gene:EMLSAG00000011211 transcript:EMLSAT00000011211 description:"maker-LSalAtl2s765-snap-gene-1.16") HSP 1 Score: 95.5153 bits (236), Expect = 1.442e-21 Identity = 71/292 (24.32%), Postives = 127/292 (43.49%), Query Frame = 0 Query: 183 QWNDERLRYYDE---SQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIAS---------YGWAKDDLIYQWKEKDPVQVVPGLHLPRF---------TLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEP 453 +W++ R +E S G L+Y +W P+ ++ + ++ VRI N I Y + + +T++C M YPLD C Q+ S +G + L+ + VQ + T E+ V+ +G Y+ ++ R+ YL+ +Y+P CM V+ SWVSF + +P R++L VT L + + + + P S AID++ VC VF AL+E+A++ + QR + + ++ R+ N + +P Sbjct: 19 EWSEARTGPKNEVNISPGSLRY--------IWYPELEIYGLEKFGRQRVLKEMSGVRIRKNKTIHYELGVRITISCRMMFDDYPLDAHTCQFQVGSCKYQDITRPWGKSTYQLLSDYDSNKTVQCSSSYVYDQIRQRSLQHYITFEELPEKDRSVVLPSGTYAACGFQIQLVRKQMQYLVQVYLPSCMFVVTSWVSFLIKPEVVPGRMALLVTLFLVLINIFNSVRERAPISSKLNAIDLYLVVCIFLVFGALMEYAVILLLLK---QRRKPKRSIDSGLRKM-FNNGEAQP 298
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000001113 (supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:1 gene:EMLSAG00000001113 transcript:EMLSAT00000001113 description:"maker-LSalAtl2s1186-snap-gene-1.38") HSP 1 Score: 95.9005 bits (237), Expect = 5.945e-21 Identity = 85/337 (25.22%), Postives = 138/337 (40.95%), Query Frame = 0 Query: 152 KSVSDLKASVE--EHWAAMDVDYEYSVQVTFREQWNDERLRY---YDESQGRLKYLTLTDPT-----------KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKE------KDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERME-RARRQWELENADMEPSPPPTGTNGPTH 465 K V+ + S++ E D DY + F +W + R+ + E T +P VWMPD F + K + +++ + I + ILYS +T CPM +PLD QVC Q+ S + + + + K + + L + + G +S EL+ R S Y+IT Y+P + VIVSW+SF + + IP R++L VT L + + + P AI+ W C FVF AL+E+ + + + + A+ ++ R + L+ E PPPT TH Sbjct: 80 KGVNHITVSIDIAEVLRINDKDYSITFSGYFNVKWQESRIELSPDFGEEVAGPGVNTTNNPNIVVPMSTEFVKDVWMPDIFIYSLKTYKVMDVLNKLAGLWIGADKTILYSQATHITFICPMRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYDIQIKMLSKEDQVFLG--GGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVIVSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIEYXAILFKKQRHVS---AQHKLNIRVVCKDNLKYEVHEQRPPPTRDVKGTH 411 HSP 2 Score: 51.2174 bits (121), Expect = 7.257e-7 Identity = 34/112 (30.36%), Postives = 52/112 (46.43%), Query Frame = 0 Query: 349 MLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWE--LENADMEPSPPPT 458 + VIVSW+SF + + IP R+ L V L + + + P AI+ W C FVF AL+E+A + + QR + + R W+ L+ E PPP+ Sbjct: 418 LFVIVSWISFLIPMDVIPGRMGLLVMLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIEYAAILFKK----QRYVSAQNKLNIRIVWKDNLKYEVYEQRPPPS 525
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000010518 (supercontig:LSalAtl2s:LSalAtl2s69:18020:76641:-1 gene:EMLSAG00000010518 transcript:EMLSAT00000010518 description:"maker-LSalAtl2s69-snap-gene-1.19") HSP 1 Score: 93.5893 bits (231), Expect = 2.757e-20 Identity = 66/240 (27.50%), Postives = 110/240 (45.83%), Query Frame = 0 Query: 209 KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITN-------TGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMST--QTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMER 439 + W PD ++ ++ +R+ N I Y+ +++ ++C M YP DK C LQ+ SY + ++ + DP+ P R QY + D+ +G YS ++ F+R+ + IY+PC + V VSWVSF + +P R+ + +T L + T +A +P S AID + VC C VF AL E+A + + +S RD+ R +R Sbjct: 126 EFWTPDLEIYGLEDFGAKRVLKSMSGLRVGKNKVIEYNSMVNVKISCRMLFDNYPFDKHKCYLQVGSYYYTEETVTCDSTFTDPLGNEPS----RQRNLQYFIKFQDLPPEEKKMELLSGNYSACGFQITFERKRLQLIYQIYLPCILFVAVSWVSFLVRPECVPGRMGMLITLFLVLVNIFNTVRSSAPVPASSRLNAIDSYLVVCICMVFLALFEYAFLLFIIKS---RDQKLARKKR 358
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Match: EMLSAG00000008455 (supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1 gene:EMLSAG00000008455 transcript:EMLSAT00000008455 description:"snap_masked-LSalAtl2s519-processed-gene-1.11") HSP 1 Score: 87.8113 bits (216), Expect = 5.630e-19 Identity = 74/303 (24.42%), Postives = 125/303 (41.25%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWK--EKDPVQVVPGLHLPRFTLEQYKSAYCDVITN---TGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYA-----------SRSDMQRDRA-----RERMERARRQWELENAD 450 D + ++ + F +W + RL + + +W+P+ F N + + + + ++ Y+ +T CPM +PLD+ C + S + +++ + DP+ L R ++ K+A D I N TG YS E+ R + YL Y+P + V VSWVSF + + +P R++L VT L + + I P V AI W C FVF ALL +A + Y R+D+ A + E+ +R+ E+E D Sbjct: 13 DKKFSVTLNMYFGVRWTENRLTKMTPGTSSWIPIDMDFMNYLWVPNVFVYNLVSFHALDCLKKLAGLWVAEGKDLFYNQATHVTFMCPMRFNKFPLDQHSCKFLVGSTNYDMTRMLFDYNTLSYDPLSGNTILDY-RIQIKPLKTA--DRIINYGETGNYSLTGFEMTLTRNMAKYLYIYYLPSGLFVGVSWVSFLIPPDVVPGRMALLVTLFLVLINIFNTITNVSPNVEGMXAISSWMIACMFFVFGALLGYAAILYVLLMKKKNCLIKKRNDLAFVHAPSCYFYKVSEQTKRKEEIEELD 312
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 438.343 bits (1126), Expect = 3.300e-147 Identity = 213/311 (68.49%), Postives = 249/311 (80.06%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-DRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474 D+ EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRS + + +E M++ RR E + D T +N T M P PG+ L Sbjct: 78 DIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKESMKKKRRDLEQASLDAASDLLDTDSNA-TFAMKPLVRHPGDPL 386 HSP 2 Score: 59.6918 bits (143), Expect = 4.537e-8 Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 615 CCGTRGLLSKFP----SRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 CC T LSKFP SR+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 406 CCKT--WLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYLF 450
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 320.087 bits (819), Expect = 2.861e-101 Identity = 151/273 (55.31%), Postives = 193/273 (70.70%), Query Frame = 0 Query: 170 VDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLH--LPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERA 440 V+ EYS Q+T RE W D+RL Y + G+ ++ LT ++WMPDTFF NEK+A KH I PNV +RI +G +LYS+RISL L+CPM L+ YP+D Q C + +ASY + D+ Y WKE P+Q+ GL LP F L + YC +TNTG YSCL+ + KREFS+YL+ +Y+P CMLVIVSWVSFW D+ AIPARV+LGVTTLLTM+ Q++GIN+QLPPVSY KAIDVW G C F+FCALLEFALVN+ + +AR E+A Sbjct: 106 VNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIANKQGVERKARTEREKA 378
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|74962112|sp|Q17328.1|GLUCB_CAEEL (RecName: Full=Glutamate-gated chloride channel subunit beta; Short=Glu-Cl subunit beta; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel subunit; Flags: Precursor) HSP 1 Score: 283.878 bits (725), Expect = 1.113e-87 Identity = 156/297 (52.53%), Postives = 204/297 (68.69%), Query Frame = 0 Query: 170 VDYEYSVQVTFREQWNDERLRYYDESQGRLK---YLTLTDPTK-VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGL--HLPRFTLEQYKS-AYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERA--RRQWELENADMEPSPPP 457 V+ EYS+Q+TFREQW D RL Y E+ G +LT+ K +W+PDTFF EK A +H I + N+++RI+P+G+ILYS RISLT +CPM L+LYPLD Q C + SY +D++Y+W PVQ+ PG+ LP F L+ Y + A C TNTG Y CL+++L+FKR+FSYYL+ +Y P M+VIVSWVSFW+D ++ RV+LGVTTLLTM+T S INA+LPPVSY K +DVW G CQ FVF ALLE+A V+Y S Q DR+RE+ R RR+ +LE D E PP Sbjct: 74 VNMEYSIQLTFREQWIDPRLAY--ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVSYQD-SVRQNDRSREKAARKAQRRREKLEMVDAEVYQPP 367
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 281.567 bits (719), Expect = 1.837e-86 Identity = 136/305 (44.59%), Postives = 198/305 (64.92%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELEN----ADMEPSPPPTGTNGPTHVMGP 469 +Y V + R++WND RL Y + L DP+ +W PD FF NEK A HE+ N +RIF NG +LYSIR++LTL+CPMDL+ +P+D Q C++Q+ S+G+ +DLI++W+++ PVQV GL LP+F L++ K YC NTG+++C++V +R+ YYLI +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR + R R + + + LE +DM+ + + + MGP Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDMDDEVRESRFSFTAYGMGP 390
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 280.796 bits (717), Expect = 4.513e-86 Identity = 145/353 (41.08%), Postives = 211/353 (59.77%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELEN----ADMEPSPPPTGTNGPTHVMGP-----PGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPG--FPL 510 +Y V + R++WND RL Y + L DP+ +W PD FF NEK A HE+ N +RIF NG +LYSIR++LTL+CPMDL+ +P+D Q C++Q+ S+G+ +DLI++W+++ PVQV GL LP+F L++ K YC NTG+++C++V +R+ YYLI +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR + R R + + + LE +D + + + + MGP G + +G + + I A ID I FPL Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDTDDEVRESRLSFTAYGMGPCLQAKDGVVPKGPNHAVQVMPKSADEMRKVFIDRAKKIDTISRACFPL 438
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 280.026 bits (715), Expect = 8.878e-86 Identity = 131/280 (46.79%), Postives = 188/280 (67.14%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELEN 448 +Y V + R++WND RL Y + L DP+ +W PD FF NEK A HE+ N +RIF NG +LYSIR++LTL+CPMDL+ +P+D Q C++Q+ S+G+ +DLI++W+++ PVQV GL LP+F L++ K YC NTG+++C++V +R+ YYLI +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR + R R + + + LE Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEK 365
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 275.018 bits (702), Expect = 4.256e-84 Identity = 142/316 (44.94%), Postives = 196/316 (62.03%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQW-ELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATT 483 +Y V + R+QWND RL Y + L DP+ +W PD FF NEK A HE+ N +RI NG +LYSIRI+L LACPMDL+ +P+D Q C++Q+ S+G+ +DLI++W EK VQV GL LP+F L++ K YC NTG+++C++ +R+ YYLI +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ +R + + R +R RR E E D S G GP + G ++G+ A T Sbjct: 81 DYRVNIFLRQQWNDPRLAYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR----QHKELLRFQRRRRHLKEDEAGDGRFSFAAYGM-GPACLQAKDGMAIKGNNNNAPT 387
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 273.092 bits (697), Expect = 2.847e-83 Identity = 128/257 (49.81%), Postives = 176/257 (68.48%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASR 425 +Y V + R+QWND RL Y + L DP+ +W PD FF NEK A HEI N +RI NG +LYSIRI+LTLACPMDL+ +P+D Q C++Q+ S+G+ +DLI++W+E+ VQV GL LP+F L++ K YC NTG+++C++ +R+ YYLI +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLD----LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 273.092 bits (697), Expect = 3.335e-83 Identity = 128/257 (49.81%), Postives = 176/257 (68.48%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSA-YCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASR 425 +Y V + R+QWND RL Y + L DP+ +W PD FF NEK A HEI N +RI NG +LYSIRI+LTLACPMDL+ +P+D Q C++Q+ S+G+ +DLI++W+E+ VQV GL LP+F L++ K YC NTG+++C++ +R+ YYLI +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLD----LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 272.322 bits (695), Expect = 4.560e-83 Identity = 126/257 (49.03%), Postives = 177/257 (68.87%), Query Frame = 0 Query: 173 EYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPT---KVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKS-AYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASR 425 +Y V + R+QWND RL Y + L DP+ +W PD FF NEK A H++ N +RI NG++LYSIR++LTL+CPMDL+ +P+D Q C +Q+ S+G+ +DLI++W PVQV GL LP+F L++ K YC NTG+++C++V+ +R+ YYLI +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ+SG A LP VSY KAID+W VC FVF ALLE+A VN+ SR Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL----DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1253728498|ref|XP_022650818.1| (glutamate-gated chloride channel-like isoform X3 [Varroa destructor]) HSP 1 Score: 452.21 bits (1162), Expect = 6.288e-149 Identity = 242/489 (49.49%), Postives = 301/489 (61.55%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 DV EY+VQ+TFR+QW DERL+Y D+ G+++YLTLTD K+W PD FF NEKE H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+ +DL++ WKE DPVQV LHLPRFTLE++ + YC TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD +R ++ + R++W LL SI A N+ ++H A F + +GG G E RG ++ + + + P ++ P R CEVHM G SS + C R LS+FP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 133 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 529
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1268022802|ref|XP_022711229.1| (glutamate-gated chloride channel-like isoform X2 [Varroa jacobsoni]) HSP 1 Score: 451.825 bits (1161), Expect = 8.603e-149 Identity = 242/489 (49.49%), Postives = 301/489 (61.55%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 DV EY+VQ+TFR+QW DERL+Y D+ G+++YLTLTD K+W PD FF NEKE H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+ +DL++ WKE DPVQV LHLPRFTLE++ + YC TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD +R ++ + R++W LL SI A N+ ++H A F + +GG G E RG ++ + + + P ++ P R CEVHM G SS + C R LS+FP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 132 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 528
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|662488950|gb|AIE48262.1| (glutamate-gated chloride channel alpha subunit, partial [Cochliomyia hominivorax]) HSP 1 Score: 446.047 bits (1146), Expect = 1.322e-148 Identity = 216/310 (69.68%), Postives = 248/310 (80.00%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474 D EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+QVC L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD D +E M++ RR E + D T +N T M P PG+ L Sbjct: 77 DYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASIDAASDLLDTDSNA-TFAMKPLVRHPGDPL 384
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1078802870|ref|XP_018494231.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate-gated chloride channel-like [Galendromus occidentalis]) HSP 1 Score: 451.055 bits (1159), Expect = 2.594e-148 Identity = 242/489 (49.49%), Postives = 298/489 (60.94%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 DV EY+VQ+TFR+QW DERL+Y D+ G+++YLTLTD K+W PD FF NEKE H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+ +DL++ WKE DPVQV LHLPRFTLE++ + YC TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD +R ++ + R++W LL SI A N+ ++H A + G E G T P+ + P ++ PQ++ R CEVHM GP G LC R LS+FP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 153 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNTHKQATQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEAFAM------------------------GNERGLGRNTLPNDA---------------DILVPRQRTHTAPQEL-RQCEVHMK------GPSSTGSN------------------LC---RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 542
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|662488946|gb|AIE48260.1| (glutamate-gated chloride channel alpha subunit, partial [Cochliomyia hominivorax]) HSP 1 Score: 446.432 bits (1147), Expect = 5.774e-148 Identity = 216/310 (69.68%), Postives = 249/310 (80.32%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474 D+ EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+QVC L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD D +E M++ RR E + D T +N T M P PG+ L Sbjct: 76 DIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASIDAASDLLDTDSNA-TFAMKPLVRHPGDPL 383 HSP 2 Score: 64.3142 bits (155), Expect = 4.603e-7 Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 615 CCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 CC T LSKFP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 403 CCKT--WLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLF 443
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|665394500|ref|NP_001287409.1| (GluClalpha, isoform O [Drosophila melanogaster] >gi|599127838|gb|AHN57408.1| GluClalpha, isoform O [Drosophila melanogaster]) HSP 1 Score: 446.047 bits (1146), Expect = 9.475e-148 Identity = 216/310 (69.68%), Postives = 249/310 (80.32%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGP----PGNLL 474 DV EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD D +E M++ RR E + D T +N T M P PG+ L Sbjct: 78 DVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKKRRDLEQASLDAASDLLDTDSNA-TFAMKPLVRHPGDPL 385
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1314955641|ref|XP_023179073.1| (glutamate-gated chloride channel isoform X17 [Drosophila hydei]) HSP 1 Score: 444.121 bits (1141), Expect = 1.595e-147 Identity = 214/310 (69.03%), Postives = 250/310 (80.65%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-DRARERMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGS 477 D EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRS + + + +E M++ RR E + D T +N T MG LLRG+ Sbjct: 79 DYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGLNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNA-TFAMGQE-RLLRGA 385
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1253728514|ref|XP_022650824.1| (glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728518|ref|XP_022650825.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728521|ref|XP_022650826.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1253728525|ref|XP_022650827.1| glutamate-gated chloride channel-like isoform X6 [Varroa destructor] >gi|1268022821|ref|XP_022711236.1| glutamate-gated chloride channel-like isoform X7 [Varroa jacobsoni] >gi|1268022823|ref|XP_022711237.1| glutamate-gated chloride channel-like isoform X7 [Varroa jacobsoni]) HSP 1 Score: 445.662 bits (1145), Expect = 1.797e-147 Identity = 242/493 (49.09%), Postives = 301/493 (61.05%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARE----RMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 DV EY+VQ+TFR+QW DERL+Y D+ G+++YLTLTD K+W PD FF NEKE H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+ +DL++ WKE DPVQV LHLPRFTLE++ + YC TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD +R + + + R++W LL SI A N+ ++H A F + +GG G E RG ++ + + + P ++ P R CEVHM G SS + C R LS+FP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 60 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQSVPQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 460
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1268022818|ref|XP_022711235.1| (glutamate-gated chloride channel-like isoform X6 [Varroa jacobsoni]) HSP 1 Score: 446.047 bits (1146), Expect = 3.197e-147 Identity = 242/493 (49.09%), Postives = 301/493 (61.05%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQRDRARE----RMERARRQWELENADMEPSPPPTGTNGPTHVMGPPGNLLRGSIGGATTLSGANSHQGMNHIGSAVDIDGIPGFPLKKRGGHNFANALREMDGGEPYRGTTTYPHQNRSNEDLSYGGMNSGYNTTQPSSLSYMLPQDMGRTCEVHMNSYPTGSGPGHGGGFAAGMTGTSSLIGHTCTYLLCCGTRGLLSKFPSRAKRIDVISRFIFPLIFAIFNMAYWLYYLF 657 DV EY+VQ+TFR+QW DERL+Y D+ G+++YLTLTD K+W PD FF NEKE H+IIVPNV +RI+PNG++L+SIRISL L+CPM+L+ YPLDKQ+C + +ASYG+ +DL++ WKE DPVQV LHLPRFTLE++ + YC TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLV+VSWVSFWLD +IPARVSLGVTTLLTM+TQ SGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRSD +R + + + R++W LL SI A N+ ++H A F + +GG G E RG ++ + + + P ++ P R CEVHM G SS + C R LS+FP+R+KRIDVISR FPL+FA+FN+ YW YLF Sbjct: 86 DVTMEYTVQLTFRQQWRDERLQY-DDLGGQIRYLTLTDQKKLWQPDLFFSNEKEGHLHQIIVPNVLLRIYPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSILMASYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLERFNTDYCTSRTNTGEYSCLKVDLVFKREFSYYLIQIYIPCCMLVVVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDQRRQNIHKQSVPQASQQRQKW----------------------------LLPASIAAAGL---ENNQSAIDHCDEA--------FAMPFQGG-----------GAE--RG------------GMARNALPNDADILVPRQRTHTAPPQEIRQCEVHMK-------------------GPSSTSSNLC--------RSWLSRFPTRSKRIDVISRIFFPLMFALFNLVYWTTYLF 486
BLAST of glutamate-gated chloride channel alpha partial vs. nr
Match: gi|1037102272|ref|XP_017084832.1| (PREDICTED: glutamate-gated chloride channel isoform X6 [Drosophila eugracilis]) HSP 1 Score: 441.425 bits (1134), Expect = 4.672e-147 Identity = 208/299 (69.57%), Postives = 242/299 (80.94%), Query Frame = 0 Query: 169 DVDYEYSVQVTFREQWNDERLRYYDESQGRLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYQWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVITNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTGVCQCFVFCALLEFALVNYASRSDMQR-----DRARERMERARRQWELENADMEPSPPPTGTNG 462 D+ EYSVQ+TFREQW DERL++ D+ QGRLKYLTLT+ +VWMPD FF NEKE H II+PNVY+RIFPNG +LYSIRISLTLACPM+L+LYPLD+Q+C L++ASYGW +DL++ WKE DPVQVV LHLPRFTLE++ + YC+ TNTGEYSCLKV+L+FKREFSYYLI IY+PCCMLVIVSWVSFWLDQ A+PARVSLGVTTLLTM+TQTSGINA LPPVSYTKAIDVWTGVC FVF ALLEFALVNYASRS + D +E M++ RR E + D T +N Sbjct: 78 DIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANRAADMHKENMKKKRRDLEQASLDAASDLLDTDSNA 375 The following BLAST results are available for this feature:
BLAST of glutamate-gated chloride channel alpha partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glutamate-gated chloride channel alpha partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glutamate-gated chloride channel alpha partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold357_size197762:81659..90085+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold357_size197762-snap-gene-0.41 ID=maker-scaffold357_size197762-snap-gene-0.41|Name=glutamate-gated chloride channel alpha partial|organism=Tigriopus kingsejongensis|type=gene|length=8427bp|location=Sequence derived from alignment at scaffold357_size197762:81659..90085+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glutamate-gated chloride channel alpha partial' has the following synonyms
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