upf0513 transmembrane protein, maker-scaffold372_size192401-snap-gene-0.39 (gene) Tigriopus kingsejongensis

Overview


Name	upf0513 transmembrane protein
Unique Name	maker-scaffold372_size192401-snap-gene-0.39
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Match: EMLSAG00000010140 (supercontig:LSalAtl2s:LSalAtl2s66:528352:531611:1 gene:EMLSAG00000010140 transcript:EMLSAT00000010140 description:"maker-LSalAtl2s66-augustus-gene-5.13")

HSP 1 Score: 221.861 bits (564), Expect = 2.052e-70
Identity = 111/281 (39.50%), Postives = 174/281 (61.92%), Query Frame = 0

Query:   86 YIVATCAKFRPRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSAS-GLTVYGDLHVVQKQPIAARGRDLRFEYP-IFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQHKELL 364
            ++        P   A     FW ++D ++EQPE  FK + +  L T +    LGWSTFK +N+ + S +R+P I++ E D N DGKLD +DL+I  PL P+E++L    FL FD KLH+L SVQF+GL ++ ++   S + G+   GD +++QK+P+  RGRD R+  P + +P S +  ++DF R+LR Y  RN++ R  + YS       G+   F +D+ + + EQ I Y PG WQVLKW WVQYL++ ++F++LFR++K ++F++Q+   +QH   L
Sbjct:   26 FVTGVLTFLPPLFIAYRSQGFWQRIDSYQEQPEILFKQDCMFLLQTSN-RTNLGWSTFKLFNRFLESGIRIPLIKTKENDWNRDGKLDNIDLQITFPLLPKEEILNFEAFLFFDVKLHKLPSVQFEGLIHLTSNLIDSKTKGIFYVGDFNLIQKEPLRHRGRDSRYNKPYLVDPISFSPDNYDFHRILRTYQTRNLTMRFENIYS--SPIHKGKIDTFQIDVLVHFPEQVILYRPGFWQVLKWGWVQYLSVLLIFLMLFRTIKTFVFSKQILHSIQHNPFL 303

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BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Match: EMLSAG00000012455 (supercontig:LSalAtl2s:LSalAtl2s915:8387:9418:-1 gene:EMLSAG00000012455 transcript:EMLSAT00000012455 description:"snap-LSalAtl2s915-processed-gene-0.39")

HSP 1 Score: 72.4034 bits (176), Expect = 4.427e-15
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0

Query:   37 LWPTSSPDLNPLDYSVWSVLESKVGKTSHRNVEELQANISKHWSEMSADYIVATCAKFRPRVEAVIEA 104
            +WP+ SP LNPLD+ VW  LE +  +TSH NV+ L++ I K W+ +S  +I+ +C  FR  VE VI A
Sbjct:    1 MWPSFSPYLNPLDFVVWVTLEREANQTSHPNVDSLKSAIVKEWNNLSEKFIINSCKAFRRCVETVITA 68

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BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Match: EMLSAG00000012291 (supercontig:LSalAtl2s:LSalAtl2s898:43780:47597:-1 gene:EMLSAG00000012291 transcript:EMLSAT00000012291 description:"snap-LSalAtl2s898-processed-gene-0.60")

HSP 1 Score: 68.9366 bits (167), Expect = 1.921e-14
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0

Query:   32 FWDKTLWPTSSPDLNPLDYSVWSVLESKVGKTSHRNVEELQANISKHWSEMSADYIVATCAKF 94
            FW+K + P  SPDLNPLDYSVW  +E K   T H N++ L+ ++++ W+ M   YI+  C  F
Sbjct:   12 FWNKNICPPQSPDLNPLDYSVWWQIEKKACATRHPNLDSLKVSVNEQWAAMEDHYIINVCKAF 74

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BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Match: EMLSAG00000012819 (supercontig:LSalAtl2s:LSalAtl2s977:186536:195143:1 gene:EMLSAG00000012819 transcript:EMLSAT00000012819 description:"snap-LSalAtl2s977-processed-gene-2.45")

HSP 1 Score: 68.5514 bits (166), Expect = 3.125e-13
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0

Query:    9 EEDGAPSHTAVKTQKFCKDNFADFWDKTLWPTSSPDLNPLDYSVWSVLESKVGKTSHRNVEELQANISKHWSEMSADYIVATCAKFRPRVEAVIEAS 105
            ++D AP H +  + ++  +N  D   K LWP +SP+LNPLDY V   +E    +  H     L  +I + +  M  + +   C +FR  +EAVI+A+
Sbjct:   62 QQDSAPCHVSKISLQWLTENCYDIVTKALWPPNSPNLNPLDYFVSGYVERHTNRHPHSTKASLMNSIKEVFGNMDNEMVRRACGRFRGXIEAVIDAN 158

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BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Match: EMLSAG00000004750 (supercontig:LSalAtl2s:LSalAtl2s24:1286685:1290496:-1 gene:EMLSAG00000004750 transcript:EMLSAT00000004750 description:"snap-LSalAtl2s24-processed-gene-13.77")

HSP 1 Score: 55.4546 bits (132), Expect = 6.435e-10
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0

Query:    9 EEDGAPSHTAVKTQKFCKDNFADFWDKTLWPTSSPDLNPLDYSV 52
            ++DGAP+H   K Q++ KDN  +FW K  WP  SPDLNPLD+S+
Sbjct:   85 QQDGAPAHAFKKAQEWLKDNM-NFWPKDYWPPQSPDLNPLDFSI 127

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|123787462|sp|Q3U284.1|TM231_MOUSE (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 209.92 bits (533), Expect = 3.031e-64
Identity = 102/260 (39.23%), Postives = 157/260 (60.38%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLL-HLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQV 354
            P + A     FW+K   + EQP   F+H++LL  L   +PE  L WSTF  +N++  +HLRVP + S E D N DGK+D L  ++E+PL P E VLG  L L F  +LHR+S+ + Q +A++Q+  A+  S L V GDL + QKQP++ RG D+R+   + N  S    D+D + ++  Y  RNV+T +     +W  G    E PFV+   +RY  + I Y PG W+++K+AW+QY++I ++F+ +F  +K ++F  QV
Sbjct:   38 PLLVAFRSHGFWLKRSSYEEQPNVRFQHQVLLVALLGPEPEAFLAWSTFPTFNRLQGAHLRVPLVSSREEDRNQDGKMDVLYFKLELPLQPTEHVLGVQLILTFSYQLHRMSTFEMQSMAFLQSSFAVPGSQLYVNGDLRLQQKQPLSYRGLDIRYNVSVINGTSPFAQDYDLTHIVAAYQERNVTTVLSDPNPIWLVGRAA-EAPFVIHAVIRYPTEVISYQPGFWEMIKFAWIQYVSILLIFLWVFERIKIFVFQNQV 296

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|166991238|sp|Q5FVM1.2|TM231_RAT (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 204.142 bits (518), Expect = 4.874e-62
Identity = 101/261 (38.70%), Postives = 157/261 (60.15%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQP--LGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQV 354
            P + A     FW+K   + EQP   F+H++LL +  L PE    L WST+  +N++   HLRVP + + E D N DGK+D L  ++E+PL   EQVLG  L L F  +LHR+S+ + Q +A++Q+  A+  S L V GDL + QKQP++ RG D+R+   + N  S    D+D + ++  Y  RNV+T +     +W  G    E PFV+D  +RY  + I Y PG W+++K+AW+QY++I ++F+ +F  +K ++F  QV
Sbjct:   38 PLLVAFRSHGFWLKRSNYEEQPNVRFQHQVLL-VALLGPEPGAFLAWSTYPTFNRLQGVHLRVPLVSTREEDRNQDGKMDVLYFKLELPLQSTEQVLGVQLILTFSYQLHRMSTFEMQSMAFLQSSFAVPGSQLHVNGDLRLQQKQPLSYRGLDVRYNVSVINGTSPFAHDYDLTHIVAAYQERNVTTVLSDPNPIWLVGRAA-EAPFVIDAVIRYPVEVISYQPGFWEMIKFAWIQYVSILLIFLWVFERIKIFVFQNQV 296

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|166991233|sp|A7MB75.1|TM231_BOVIN (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 202.216 bits (513), Expect = 2.853e-61
Identity = 101/260 (38.85%), Postives = 154/260 (59.23%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLL-HLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQV 354
            P + A     FW+K   + EQP   F+H++LL  L   +P   L WSTF  +N++   HLRVP + + E D N DGK+D L  ++E+PL   EQVLG  L L F  +LHR+S+   Q +A++Q+  AL  S L V GDL + QKQP+   G D+R+   + N  S   +D+D +R++  Y  RNV+T +     +W  G    E PFV++  +RY  + I Y PG W+++K+AW+QY++I ++F+  F  +K ++F  QV
Sbjct:   38 PLLVAFRSHGFWLKRSSYEEQPTVRFQHQVLLVALLGSEPGGFLAWSTFPAFNRLQEGHLRVPLVSAREEDRNQDGKMDMLHFKLELPLQSTEQVLGVQLILTFSYQLHRMSTFVMQSMAFLQSSFALPGSQLYVNGDLRLQQKQPLGYGGLDVRYNVSVINGTSPFASDYDLTRIVAAYQERNVTTILTDPSPIWLVGRAA-EAPFVVNAVIRYPVEVISYLPGFWEMIKFAWIQYVSILLIFLWAFERIKRFVFQNQV 296

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|75042080|sp|Q5RBT8.1|TM231_PONAB (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 192.586 bits (488), Expect = 1.458e-57
Identity = 98/261 (37.55%), Postives = 151/261 (57.85%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQP--LGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQV 354
            P + A     FW+K   + EQP   F+H++LL +  L PE    L WSTF  +N++    LRVP + + E D N DGK+D L  ++E+PL   E VLG  L L F  +LHR+++   Q +A++Q+   +  S L V GDL + QKQP++  G D R+   + N  S    D+D + V+  Y  RNV+T +     +W  G    + PFV++  +RY  + I Y PG W+++K+AWVQY++I ++FV +F  +K ++F  QV
Sbjct:   38 PLLVAFRSHGFWLKRSSYEEQPTVRFQHQVLL-VALLGPESGGFLAWSTFPAFNRLQGDRLRVPLVSTREEDRNQDGKMDMLHFKLELPLQSTEHVLGVQLILTFSYQLHRMATPVMQSMAFLQSSFPVPGSQLYVNGDLRLQQKQPLSCGGLDARYNVSVINGTSPFAYDYDLTHVIAAYQERNVTTILNDPNPIWLVGRAA-DAPFVINAIIRYPVEVISYQPGFWEMVKFAWVQYVSILLIFVWVFERIKIFVFQNQV 296

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|378526626|sp|F1NNL1.2|TM231_CHICK (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 189.889 bits (481), Expect = 1.769e-56
Identity = 95/261 (36.40%), Postives = 147/261 (56.32%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDT-LDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVF 355
            P + A     FW+K   +REQP   F++ELL    T   P   L WSTF  +N++    LRVP + + E D N DGK+D L  ++E+PL P E V+G  L LIF  +L+R+S+   Q +A++Q  S +  S L   GDL + Q+Q +   G D R+   + N  S   +D+D   ++  Y  RNV+T       +W  G  G   PF+++  +RY  + I Y PG W+ +K+AW+QY++I ++F+ +F  +K ++F  QVF
Sbjct:   39 PLLVAYRSHGFWLKQSAYREQPTVRFRYELLFVATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTFVMQSMAFLQFFSPVPGSQLYANGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLKNIIAAYRDRNVTTVFSDSNPIWMTGR-GANTPFIVNATIRYPVEVILYQPGFWETIKFAWIQYVSILLIFLWVFGRIKMFVFQNQVF 298

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|74733611|sp|Q9H6L2.1|TM231_HUMAN (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 188.734 bits (478), Expect = 4.145e-56
Identity = 95/260 (36.54%), Postives = 150/260 (57.69%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQP--LGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQ 353
            P + A     FW+K   + EQP   F+H++LL +  L PE    L WSTF  +N++    LRVP + + E D N DGK D L  ++E+PL   E VLG  L L F  +LHR++++  Q +A++Q+   +  S L V GDL + QKQP++  G D R+   + N  S    D+D + ++  Y  RNV+T +     +W  G    + PFV++  +RY  + I Y PG W+++K+AWVQY++I ++F+ +F  +K ++F  Q
Sbjct:   38 PLLVAFRSHGFWLKRSSYEEQPTVRFQHQVLL-VALLGPESDGFLAWSTFPAFNRLQGDRLRVPLVSTREEDRNQDGKTDMLHFKLELPLQSTEHVLGVQLILTFSYRLHRMATLVMQSMAFLQSSFPVPGSQLYVNGDLRLQQKQPLSCGGLDARYNISVINGTSPFAYDYDLTHIVAAYQERNVTTVLNDPNPIWLVGRAA-DAPFVINAIIRYPVEVISYQPGFWEMVKFAWVQYVSILLIFLWVFERIKIFVFQNQ 295

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|378524711|sp|F7B645.1|TM231_XENTR (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 184.496 bits (467), Expect = 1.579e-54
Identity = 90/272 (33.09%), Postives = 148/272 (54.41%), Query Frame = 0

Query:   87 IVATCAKFRPRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            IV       P + A     FW+K   + EQP   F++++LL   +      L WST+  +N ++   LR+P I + E D N DGK+D L+ ++E+PL P + + G  L L F  +L ++S+   Q +A IQ  S +  S L + GDL + Q+QP+  RG D  +   + N  S   + +  + ++  Y  RNV+T +     LW  G    + PFV+   +RY  ++I Y PG W++LK+AW+QY++I ++F+ +F  +K ++F  QV   V
Sbjct:   29 IVLLLTYIPPLLVAFRSYGFWLKTSTYEEQPNVRFQYDVLLIALSSTTGNYLAWSTYPGFNNLVGDKLRLPHISAREEDRNQDGKMDLLNFQLELPLQPTDNIYGVQLILTFSYQLSKMSTFIMQSMALIQYSSPIPGSQLYMNGDLKLQQRQPLNHRGLDTTYNVSVINRSSPFASTYALTNIISSYQERNVTTVLNAPNPLWIVGRAASD-PFVIKAVIRYPVESISYVPGFWEMLKYAWIQYVSILLIFLWVFERIKIFVFQNQVLTTV 299

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BLAST of upf0513 transmembrane protein vs. SwissProt
Match: gi|378405208|sp|Q7T316.2|TM231_DANRE (RecName: Full=Transmembrane protein 231)

HSP 1 Score: 183.726 bits (465), Expect = 3.308e-54
Identity = 91/272 (33.46%), Postives = 149/272 (54.78%), Query Frame = 0

Query:   87 IVATCAKFRPRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            +V       P + A     FW+K + + EQP   F+++L+L   T      L WSTF N+N++I  +LR+P I + E D N DGK D L L+I +PL P EQ+    L L F  +L R+S+V  Q LA+IQ  S +  S L + GDL + Q+ P+  RG    +   + +  S   + +D + ++R Y  RN++T +     +W  G      PF +   + Y  + I Y PG W+ +K+AW+QY+++ ++F+ +F+ ++ +IF  QV P +
Sbjct:   29 VVLGLTYISPLLVAYRSQGFWLKRNSYEEQPVVKFQYDLILLGVTDTTGNYLAWSTFPNFNRLIGDNLRIPEISAQEEDKNQDGKSDVLLLQISVPLKPAEQMFSVQLLLTFSYQLFRMSTVVMQTLAFIQHSSPVPGSQLFICGDLRLNQRTPLPHRGLHSTYNVSVIDGSSPFASTYDLTNIIRLYQQRNLTTHLSGVIPVWTVGRAANA-PFQISAQIHYPVEMIDYRPGFWETIKFAWIQYVSVLLIFLWVFQHIQTFIFQNQVLPTI 299

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BLAST of upf0513 transmembrane protein vs. nr
Match: gi|919007606|ref|XP_013388684.1| (transmembrane protein 231 [Lingula anatina])

HSP 1 Score: 227.639 bits (579), Expect = 9.116e-69
Identity = 108/254 (42.52%), Postives = 157/254 (61.81%), Query Frame = 0

Query:  105 SFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
             FW K D ++EQP+ HFKH++L+ L+T      + WST++N+N+M  +HLRVP ++S E D N DG  D L L +++PL   E + G  L LIFD KL+ LSS Q + +AYIQ  S  S + L V GDL +VQK  +  RG D RF  P+ +  S     +D + +   Y+ RNV+T +   Y +W  G  G  +PFV+   +RY  +T++Y PG WQ++KWAWVQY+AI ++FV  F  +K +IF  Q+ P +
Sbjct:   47 GFWQKSDTYQEQPDVHFKHQVLMVLETAQESSYIAWSTYQNFNRMQQAHLRVPIVKSREEDSNRDGLYDTLYLTVQVPLLDTEHIHGVKLLLIFDYKLNILSSFQMESMAYIQHDSPRSGAELKVIGDLRLVQKDLLLHRGVDNRFNSPVIDDTSIYADAYDLANIFSSYSSRNVTTVLDSSYPVWTTGR-GTGQPFVITATIRYPRETLFYIPGFWQLIKWAWVQYVAILIIFVAAFDRIKTFIFQNQLVPTI 299

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BLAST of upf0513 transmembrane protein vs. nr
Match: gi|762079141|ref|XP_011412256.1| (PREDICTED: transmembrane protein 231 [Crassostrea gigas] >gi|405956919|gb|EKC23161.1| UPF0513 transmembrane protein [Crassostrea gigas])

HSP 1 Score: 225.328 bits (573), Expect = 7.061e-68
Identity = 105/257 (40.86%), Postives = 159/257 (61.87%), Query Frame = 0

Query:  105 SFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQHK 361
             FW K + +RE P  HFK + L+ L+       + +ST++ YNQ+   ++R+P I+S EPD+NGDGK D L+ ++E+PL   E+V+GA L L FD  LHR SS   + +AYI   S    + L VYG+L++ QKQPI  RG+DLR+   I +  S    D+D + + + Y  RNV+T++   YSLWR G  G  +PFV+  ++ Y EQ I Y PG W ++KW WVQY+++ ++F+ +F  +K +IF  Q+   +  K
Sbjct:   47 GFWKKEEFYREVPNVHFKKQFLVVLELEQEGSFITYSTYQRYNQLQQQNIRIPLIQSREPDENGDGKADGLEFKLEMPLLGSEKVVGAKLLLFFDYTLHRFSSFGMESMAYINYESPKPGARLDVYGELNMRQKQPIGHRGQDLRYSGSIIDSTSVYAEDYDLANIFKTYTERNVTTQLNAPYSLWRSGR-GAGQPFVISSNITYTEQMILYYPGFWYMIKWGWVQYVSVLLVFLYVFDRIKIFIFQNQLVTTIVEK 302

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BLAST of upf0513 transmembrane protein vs. nr
Match: gi|926625069|ref|XP_013778016.1| (transmembrane protein 231-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 224.942 bits (572), Expect = 1.168e-67
Identity = 102/280 (36.43%), Postives = 174/280 (62.14%), Query Frame = 0

Query:   80 SEMSADYIVATCAKFRP-RVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            S+++  Y+V     F P  + A     FW K + ++EQP+ HFKH+L++ L+     + L WSTF   N ++ ++LR+P I++ E D N DG+ D+LDL++E+PL  EE+V    + L FD +L+  S+++ +GL Y   +S L+ S L + G+L + Q++P++ +GRD RF  PI +    N   +   ++L  Y  RNV+T +G++Y  W+ G  G ++PF++ L++ Y E+TI Y  G WQ+LKWAW+QY A+ ++F+ +   +K ++F  Q+F  +
Sbjct:   21 SKVTLIYMVFLILTFVPPFLIAYRSQGFWKKTEVYQEQPDVHFKHQLIIILENKSHGETLVWSTFSQLNNVVQNNLRIPVIKTKEEDVNKDGRFDSLDLKVEMPLHDEEEVYSVKMLLFFDYELYTYSNLRMEGLGYFFYNSPLAGSQLFMIGELRLHQREPLSNKGRDERFNIPIIDTNDRNTEKYTIEKILNSYVRRNVTTYLGNEYVDWKTGR-GAKKPFIISLNILYPEETIIYKTGFWQLLKWAWIQYAAMLLIFLYIIHQIKDFVFRNQLFSTI 299

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|1339093347|ref|XP_023707907.1| (transmembrane protein 231 [Cryptotermes secundus] >gi|1330914131|gb|PNF33317.1| Transmembrane protein 231 [Cryptotermes secundus])

HSP 1 Score: 222.631 bits (566), Expect = 8.289e-67
Identity = 110/264 (41.67%), Postives = 159/264 (60.23%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQ 359
            P + A     FWIK D +REQP+ HFKHE LL ++T   E P+  ST++ ++Q+I  H     I+S E D+N DGK D L   I++ L   +     TLFL+FD KL+++SS Q + L  IQ  S+L  +   V  DL + QKQ +  RGRD+RF   + N E      F    +L++YA RNVST + + Y LW  G    E PF++   + Y E+TI Y PG WQ++KWAW+QY++I V+FV +FR+VK+Y+F  Q+   ++
Sbjct:   38 PMLIAYRSYGFWIKSDVYREQPDVHFKHEYLLIIETDTLEAPVICSTYQYFSQIIKEHNHCTMIKSREEDNNRDGKYDELYFEIQVQLLQNQAAHAVTLFLLFDYKLYKMSSFQMESLGMIQYSSSLPGARFDVVADLRLTQKQLLHNRGRDVRFNKAVLNMEDIFPESFSLPTLLKNYAKRNVSTILKNAYPLWTVGRPADE-PFIISAVIHYPEETILYKPGFWQIMKWAWIQYISILVIFVCVFRTVKSYVFQNQLITSIK 300

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|957848731|ref|XP_014674883.1| (PREDICTED: transmembrane protein 231-like [Priapulus caudatus])

HSP 1 Score: 219.935 bits (559), Expect = 1.128e-65
Identity = 104/263 (39.54%), Postives = 159/263 (60.46%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            P + A     FW+K+  + EQP+  FK++LL+ LDT D    L WSTF+N+N +  SH+R+P ++S E D N DGK D L   +E+P+   E +    L L FD +L++ S    + +AY+   +  S +  +  G L +VQ+QP+A RG D R+     + ES     +DF R+ ++Y  RNV+TR   DYS+W RG  G   PF + + +RY E+++ YTPG WQV+K AW+QYLA+ ++FVL+F  +K Y+F  Q+   +
Sbjct:   38 PLIFAYKSQGFWLKLSSYVEQPDIRFKYQLLVILDTADDY--LAWSTFQNFNSLQQSHIRIPLVKSREEDVNRDGKKDLLHFSLEMPVTDTEDIFALQLLLFFDYRLYKFSEFTMESMAYVHHSAMQSGAEYSTDGHLILVQRQPLAHRGVDSRYNNTSIDQESIFAEAYDFKRIFKEYNSRNVTTRYDADYSVWVRGR-GSGMPFTITITVRYPEESVTYTPGFWQVMKDAWIQYLAVLIIFVLVFDRIKKYVFKNQLVTTI 297

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|1316159630|ref|XP_023224972.1| (transmembrane protein 231-like [Centruroides sculpturatus])

HSP 1 Score: 218.779 bits (556), Expect = 3.331e-65
Identity = 109/286 (38.11%), Postives = 169/286 (59.09%), Query Frame = 0

Query:   80 SEMSADYIVATCAKFR-PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQHKELL 364
            S+ +  Y+V+T      P + A     FW K++ +REQP+  FKHELLL ++T + +  L WS++   N++   ++R+P I + E D N DGK D L++++++P+  +E V    L L F+ KLH  S    +GLAYI   S L  + L+V GDL + QK+P+  +G D+RF  P+ NP STN+ D+    +L  YA R+V+T + H Y +W  G  G   PF +++ + Y EQTI Y  G WQ+LKW W QY+ I ++F+ +F  +  +IF  Q+ P V    +L
Sbjct:   21 SKATIYYVVSTFFMITLPFIIAYRTEGFWKKIEFYREQPQVKFKHELLLIVETSE-DNLLFWSSYPRLNEITYQNIRIPLITNREDDVNRDGKNDILNIKLDVPVTSKENVHSIKLMLFFEYKLHLYSEFIMEGLAYIHHSSPLPGASLSVVGDLALSQKEPLNHKGHDVRFNTPVVNPLSTNIDDYRLESILSSYASRSVTTYLKHSYPVWTTGR-GDNSPFTVNITIFYPEQTILYKTGFWQLLKWGWAQYIPIFLVFLYIFHHINIFIFRTQLVPTVTENSVL 304

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|780038470|ref|XP_011667727.1| (PREDICTED: transmembrane protein 231 [Strongylocentrotus purpuratus])

HSP 1 Score: 218.394 bits (555), Expect = 3.873e-65
Identity = 107/265 (40.38%), Postives = 157/265 (59.25%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQH 360
            P + A     FWIK   +REQP+  FKH++LL L T      + WST+ N+N +  ++LR+P I+S E D N DGK D     IE+P+   E+VLGA +  IFD +L+R S V+ + +AY+   SA+  + L V GDL +  KQP+A +G D R+  PI +  S    D+ FS++   Y  RN+STR   DY +W  G  G  +PF++   + Y E+TI Y PG WQV+K+ W+QYL++  LF+ L   VK ++F  Q+   + H
Sbjct:   38 PFLIAYRSEGFWIKEAFYREQPDVKFKHQILLVLHTDSQIGYVTWSTYLNFNLLEQANLRIPLIKSREEDSNRDGKNDKFLFSIEVPVLDTEKVLGAQVIFIFDYRLYRFSDVRMESMAYVSHTSAMPGAELNVDGDLSLRLKQPLAHKGYDTRYNDPIIDSTSVFAEDYSFSKIFSSYQQRNISTRFECDYPVWLTGR-GTGQPFIIKGTIYYPEETIVYVPGFWQVIKFGWIQYLSVLFLFIFLMERVKTFVFENQIVNTIVH 301

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|1242803912|ref|XP_022342597.1| (transmembrane protein 231-like [Crassostrea virginica])

HSP 1 Score: 215.312 bits (547), Expect = 5.700e-64
Identity = 101/257 (39.30%), Postives = 154/257 (59.92%), Query Frame = 0

Query:  105 SFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVVQHK 361
             FW K + +RE P   FK +LL+  +       + +ST++ YNQ+   ++R+P I+S EPD+NGDGK D L+ ++E+PL   E+V+G  + L FD  LHR SS   + LAYI   S    + L VYG+L++ QKQP+  RG D RF   I +  S     +D + + + Y  RNV+T++   YS+WR G  G  +PFVL  ++ Y EQ I Y PG W ++KW WVQY+++ ++F+ +F  +K +IF  Q+   +  K
Sbjct:   47 GFWKKEEYYREVPTVSFKKQLLVVFELEQEGSYITYSTYQRYNQLQQQNIRIPLIQSREPDENGDGKADGLEFKLEMPLLDSEKVIGVKVLLFFDYTLHRFSSFGMESLAYINYESPKPGARLDVYGELNLRQKQPLGHRGLDTRFSGSIIDSTSVYAESYDLANIFKKYTERNVTTQLNAPYSVWRSGR-GAGQPFVLSSNITYTEQMILYYPGFWYMIKWGWVQYVSVLLVFLYVFDRIKIFIFQNQLVTTIVEK 302

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|1238857676|ref|XP_022245643.1| (transmembrane protein 231-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 215.698 bits (548), Expect = 5.780e-64
Identity = 102/293 (34.81%), Postives = 174/293 (59.39%), Query Frame = 0

Query:   80 SEMSADYIVATCAKFRP-RVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLH-------------RLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            S+++  Y+V     F P  + A     FW K + ++EQP+ HFKH+L++ L+     + L WSTF   N ++ ++LR+P I++ E D N DG+ D+LDL++E+PL  EE+V    + L FD +L+               S+++ +GL Y   +S L+ S L + G+L + Q++P++ +GRD RF  PI +    N   +   ++L  Y  RNV+T +G++Y  W+ G  G ++PF++ L++ Y E+TI Y  G WQ+LKWAW+QY A+ ++F+ +   +K ++F  Q+F  +
Sbjct:   21 SKVTLIYMVFLILTFVPPFLIAYRSQGFWKKTEVYQEQPDVHFKHQLIIILENKSHGETLVWSTFSQLNNVVQNNLRIPVIKTKEEDVNKDGRFDSLDLKVEMPLHDEEEVYSVKMLLFFDYELYVSMLFSLISNDEQTYSNLRMEGLGYFFYNSPLAGSQLFMIGELRLHQREPLSNKGRDERFNIPIIDTNDRNTEKYTIEKILNSYVRRNVTTYLGNEYVDWKTGR-GAKKPFIISLNILYPEETIIYKTGFWQLLKWAWIQYAAMLLIFLYIIHQIKDFVFRNQLFSTI 312

[Close]

BLAST of upf0513 transmembrane protein vs. nr
Match: gi|1087828552|ref|XP_004226312.3| (PREDICTED: transmembrane protein 231-like [Ciona intestinalis])

HSP 1 Score: 214.542 bits (545), Expect = 1.608e-63
Identity = 96/263 (36.50%), Postives = 155/263 (58.94%), Query Frame = 0

Query:   96 PRVEAVIEASFWIKVDEFREQPEFHFKHELLLHLDTLDPEQPLGWSTFKNYNQMINSHLRVPTIRSSEPDDNGDGKLDALDLRIEIPLGPEEQVLGATLFLIFDAKLHRLSSVQFQGLAYIQAHSALSASGLTVYGDLHVVQKQPIAARGRDLRFEYPIFNPESTNVADFDFSRVLRDYAHRNVSTRIGHDYSLWRRGTVGQERPFVLDLHLRYQEQTIYYTPGLWQVLKWAWVQYLAIAVLFVLLFRSVKAYIFTQQVFPVV 358
            P + A     FW+  + + EQP   FK ++LL +DT  P + L WST+ N+N ++  +LR+P + S E D NGDG LD L+   ++PL   E V    L L FD +L R+S+ Q + LAYI+  S  + S  T +G+L + QK P+  RG D+R+   I +  S + + +D + + R Y  RN++T   ++Y +W+ G  G  +PF + + + Y  +TI Y PG W+++KW WVQY+ I +LF+ +FR +   +F+ ++F  V
Sbjct:   46 PLLIAYRSQGFWMTTNTYEEQPSVRFKKQVLLIVDTQQPGEFLAWSTYSNFNNIVQDNLRIPLVTSIETDTNGDGILDQLNFTAQVPLSTSEDVTSLQLLLFFDYRLFRMSTFQMESLAYIRHSSVSTGSSFTSFGELKLHQKTPLRHRGVDVRYNTSIVDSASLSASTYDLTNIFRSYNQRNITTIFPNNYPVWKSGR-GATQPFTIQVIIDYPTETIIYQPGFWELIKWGWVQYVTILLLFLWVFREINTVVFSSKMFKTV 307

The following BLAST results are available for this feature:

BLAST of upf0513 transmembrane protein vs. L. salmonis genes
BLAST of upf0513 transmembrane protein vs. SwissProt
BLAST of upf0513 transmembrane protein vs. nr

BLAST of upf0513 transmembrane protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAG00000010140	2.052e-70	39.50	supercontig:LSalAtl2s:LSalAtl2s66:528352:531611:1 ...	[more]
EMLSAG00000012455	4.427e-15	47.06	supercontig:LSalAtl2s:LSalAtl2s915:8387:9418:-1 ge...	[more]
EMLSAG00000012291	1.921e-14	44.44	supercontig:LSalAtl2s:LSalAtl2s898:43780:47597:-1 ...	[more]
EMLSAG00000012819	3.125e-13	32.99	supercontig:LSalAtl2s:LSalAtl2s977:186536:195143:1...	[more]
EMLSAG00000004750	6.435e-10	54.55	supercontig:LSalAtl2s:LSalAtl2s24:1286685:1290496:...	[more]

BLAST of upf0513 transmembrane protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 8


Match Name	E-value	Identity	Description
gi\|123787462\|sp\|Q3U284.1\|TM231_MOUSE	3.031e-64	39.23	RecName: Full=Transmembrane protein 231	[more]
gi\|166991238\|sp\|Q5FVM1.2\|TM231_RAT	4.874e-62	38.70	RecName: Full=Transmembrane protein 231	[more]
gi\|166991233\|sp\|A7MB75.1\|TM231_BOVIN	2.853e-61	38.85	RecName: Full=Transmembrane protein 231	[more]
gi\|75042080\|sp\|Q5RBT8.1\|TM231_PONAB	1.458e-57	37.55	RecName: Full=Transmembrane protein 231	[more]
gi\|378526626\|sp\|F1NNL1.2\|TM231_CHICK	1.769e-56	36.40	RecName: Full=Transmembrane protein 231	[more]
gi\|74733611\|sp\|Q9H6L2.1\|TM231_HUMAN	4.145e-56	36.54	RecName: Full=Transmembrane protein 231	[more]
gi\|378524711\|sp\|F7B645.1\|TM231_XENTR	1.579e-54	33.09	RecName: Full=Transmembrane protein 231	[more]
gi\|378405208\|sp\|Q7T316.2\|TM231_DANRE	3.308e-54	33.46	RecName: Full=Transmembrane protein 231	[more]

BLAST of upf0513 transmembrane protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|919007606\|ref\|XP_013388684.1\|	9.116e-69	42.52	transmembrane protein 231 [Lingula anatina]	[more]
gi\|762079141\|ref\|XP_011412256.1\|	7.061e-68	40.86	PREDICTED: transmembrane protein 231 [Crassostrea ...	[more]
gi\|926625069\|ref\|XP_013778016.1\|	1.168e-67	36.43	transmembrane protein 231-like isoform X2 [Limulus...	[more]
gi\|1339093347\|ref\|XP_023707907.1\|	8.289e-67	41.67	transmembrane protein 231 [Cryptotermes secundus] ...	[more]
gi\|957848731\|ref\|XP_014674883.1\|	1.128e-65	39.54	PREDICTED: transmembrane protein 231-like [Priapul...	[more]
gi\|1316159630\|ref\|XP_023224972.1\|	3.331e-65	38.11	transmembrane protein 231-like [Centruroides sculp...	[more]
gi\|780038470\|ref\|XP_011667727.1\|	3.873e-65	40.38	PREDICTED: transmembrane protein 231 [Strongylocen...	[more]
gi\|1242803912\|ref\|XP_022342597.1\|	5.700e-64	39.30	transmembrane protein 231-like [Crassostrea virgin...	[more]
gi\|1238857676\|ref\|XP_022245643.1\|	5.780e-64	34.81	transmembrane protein 231-like isoform X1 [Limulus...	[more]
gi\|1087828552\|ref\|XP_004226312.3\|	1.608e-63	36.50	PREDICTED: transmembrane protein 231-like [Ciona i...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold372_size192401	supercontig	scaffold372_size192401:1279..4606 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:integral to membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold372_size192401-snap-gene-0.39-mRNA-1	maker-scaffold372_size192401-snap-gene-0.39-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold372_size192401:1279..4606+

gene from alignment at scaffold372_size192401:1279..4606+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold372_size192401-snap-gene-0.39 ID=maker-scaffold372_size192401-snap-gene-0.39|Name=upf0513 transmembrane protein|organism=Tigriopus kingsejongensis|type=gene|length=3328bp|location=Sequence derived from alignment at scaffold372_size192401:1279..4606+ (Tigriopus kingsejongensis)
ATGTCTTCAGCGAGCTCATTGCCAGAGGAGGATGGCGCCCCCAGCCATAC
GGCTGTGAAGACGCAGAAGTTCTGCAAGGACAACTTTGCCGACTTCTGGG
ACAAGACCCTCTGGCCCACCTCCAGCCCAGATCTCAATCCCCTCGATTAC
AGCGTGTGGAGCGTGTTAGAGAGCAAGGTGGGAAAGACATCCCACAGGAA
CGTGGAGGAGCTGCAGGCCAACATCTCGAAGCACTGGTCCGAGATGTCCG
CGGACTACATCGTGGCGACGTGCGCCAAGTTCCGACCTCGTGTCGAGGCT
GTGATTGAGGCTAGTGGCGGCCATATTGAGTAGTTATAGTCAAGACCTTT
TGCTACAAATTCTGTTAAAAAGTTTTATCAATATATCTTTCCGTTAAAAA
GTTATTGAACCTTTTGGTGTACTTGTTGATCGCGGAAAAATTCCCTGTCG
CACTCTGTACTATCCGGCTCACAATAATATATCGTGACACCAGACTCTTG
TTGCCCACACGACCCAGGGTCGGCCCGATTTCAGCCCTGTTCTCGGAGGT
TGGGCCATAACTCGGGGTTAGCCATGATCGCCTGATTGGATCATCGAAGG
CTTAAGTCTGGGCATGGGTCGTCGATAAGTTTTTTGCCCCGCTTTATAGG
TTTCTGGATCAAGGTCGATGAATTTCGCGAGCAGCCAGAATTTCATTTCA
AGCACGAGCTTCTCCTCCACTTGGACACGCTCGACCCCGAGCAACCCTTG
GGCTGGAGTACATTCAAGAACTATAACCAGATGATCAACTCCCATCTTCG
AGTTCCCACCATTCGGGTAGGTTGAAGCCTCTCAGGGCCATTACTGTATA
CCTAGTTTACCTACGAATATAGGCTCCTTCAGCGATCTCGTGTCTTCCAT
TAGAGCTCCGAACCCGATGACAATGGCGATGGCAAGTTGGACGCTCTCGA
CCTGAGGATCGAGATACCCTTGGGACCAGAGGAACAGGTTTTGGGAGCCA
CGCTTTTTCTCATTTTTGATGCCAAGTTACATGTGAGTCCTACTTTGAAT
ACACCAACCACATATACATAGGTTGCCTGCCTGTGGTCCCCTTGGGTCCT
TCACACTCTGTTAGTTAATTGTCTTGGGTATACGCGTACTTCACACTCCG
GTAGTTAACTGTCTGTTGGATGGGTGTTTGGGAATGTATGCCTAATCTGC
CAACCGCGTGGAAAGGCACTGTGGCATGTCGTCGTCCTTTAATAGCCATC
TGTAACACCAACATCTAGAAAAGGGTCATCTCACGATGAGTGGACCAAGC
TGAGCCAGAACTAGATACCCTAGTTCTGTAACCACGCTGACCCAGAACGA
GATCATGATGCGACAGGAGCAACTAATGAGCGCAACAGCACTGTGATATC
AGTCTGACACTCCCACACCCTGGGTTTTCGACATGCCCTTTCATTGCTCT
CGTACTCTTGTACGATCCCAGATTCCTGGAGCACAGAATTGGCAATGGCA
GGCATTTTGAACAGGCTAGGGAGAGGCTAAGATTCAGCGACAGACTCCAA
ATCCTTACCCCAGCTCAACACGCCCACAGCTTGAGAAGGGAAACCAGGAA
ATTGGGTTATTTAGGTAATTACCTATTGTATTAATTATGAATCTCTCGGG
GACAAGTACGGACAGGTCTTTTGCATGTCAATGTAATGTGTCAGTATGCC
CGTTGAACGTCAAGGCCATTTTGAGCCCAAAGAGAAGTGGCCTTGCGCAC
GTTCTAAGCCTCTCCTCAACTTAACGACAGGGTTGACTGTTGAATGATGC
CGACCACCGTGGACAAATTTCCACAGTCAGTGCAAACCACCTCAGAATGG
TTTCTAATTGAACTTGTGATTACAAGGACCCACAGATAAAAATGGGCCAA
GAAAATGGCCAAGAGCTGCAATAGTTCATTAAACCAAAGCAGGTCTCCAA
TTGTACCAACATTATGTCATTGTTAAAAATGGGCAAAAAGGCCCGGCTTT
GGGCGTTAAAACAGAACTAGTGGCTTGCCTGAATTTTGAACCGCCATTTA
TTCTTTACATCAAATGGCCATCAGTTTAAGAAAGACAACAATTCAGAATT
GGGAAGCAAGACCCTGTTTCTTGGCGCTTTGACGCTGCTGCCCAATACCT
ATATATCTTATATTTATACTGTCATATTGAACGACTCTCCTGATGCTGCC
ATTGTTTTGGCCTGCTGGTTAGGCTTCGGATATAGTTTCTGATTAGCTTG
TGTCTGACCATATTAATTAGGCCACGGGTGGGAAAGGTCCGAATTCGTGG
TGGTCTGGCCTTCATTAGACACGTCTGTTCCACTTTGAAGTGAAAAAACA
CCTCATGGGTGTTGAGTTCTGTCACAAGGTGGCCCTCGTATTGCTCACAT
TTAACTCATCGTGAATAAACGGCAGTTCTGTACCATCTTAAGTCAAGCGT
TCACGTCTCGCATTACTCCACGTATACTGTACAACAATGGGTGGACGTGC
TTATCCGGCGGACCCTGTACAGTAGTTTCGTTCACGTAGCCAACGATATA
AAACGATAGCCGACAGGGATTCCGGTAAGAATATGTGAGTGAGATATTTC
CTTTTCGGGGGTGATGAATAGCGACTGAAGTCATCCAGTAAAAAGTAAGC
TAAAGTTCCGTCAATGGGACAATCCCAATTCGAGTCCCTCGCCCAACTAG
GCTCATTTCCTTCCCTCCAGCGCTTGTCCTCGGTCCAGTTCCAAGGCTTG
GCCTACATCCAGGCTCACTCGGCACTAAGTGCCTCGGGTTTGACGGTCTA
TGGGGATCTACACGTGGTCCAGAAGCAGCCCATTGCAGCCCGAGGTCGGG
ATCTCCGCTTCGAATATCCCATCTTCAATCCCGAGTCCACCAATGTGGCT
GATTTTGATTTTTCCCGCGTCCTCCGAGATTACGCCCACCGAAATGGTAG
CTGCTCCAAGGTAAGCTATGTTTGACGCCTGAGATGACCTCTGCCTCTCT
CGCTCTAGTGAGCACTCGAATTGGGCATGACTATTCCCTCTGGCGCCGAG
GAACAGTGGGACAAGAACGCCCATTCGTGCTCGACCTCCACCTGCGATAT
CAGGAGCAAACCATCTACTATACCCCGGGGCTGTGGCAGGTAAGCTCGTG
TGAATTGCATTGACCGTCGTCCATCTCCATGACTGTTCTTTTCCAGGTGC
TGAAGTGGGCGTGGGTTCAGTATTTGGCCATTGCCGTACTATTTGTGCTA
CTGTTTCGATCCGTTAAAGCTTACATTTTCACCCAGCAAGTGTTCCCGGT
CGTCCAACACAAGGAGCTCTTGCTTTGA

Synonyms

The feature 'upf0513 transmembrane protein' has the following synonyms


Synonym
Tk00574

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