achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity, maker-scaffold375_size191602-snap-gene-0.38 (gene) Tigriopus kingsejongensis

Overview
Nameachain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity
Unique Namemaker-scaffold375_size191602-snap-gene-0.38
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Match: EMLSAG00000004676 (supercontig:LSalAtl2s:LSalAtl2s244:183507:188860:-1 gene:EMLSAG00000004676 transcript:EMLSAT00000004676 description:"maker-LSalAtl2s244-augustus-gene-1.13")

HSP 1 Score: 100.908 bits (250), Expect = 1.350e-25
Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYS-ELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQ-QGTALANDLKKQYKVTGMPSVIVVTK-DGQLITRSGRSEITENGPKIFQNW 158
            M+ L G KL         +   L  KK  ++ FSA WCPP R F PIL   Y+  L K+    EV+FVS D  +EEM +YMK+ HG W++I  + + L   L  + +V G+P+++VV   DG +++R  RSEIT  G   F  W
Sbjct:  108 MEILNGVKLVNAERRETVANNYLKGKKYAVFYFSAHWCPPCRQFTPILAQAYAGALGKKG---EVIFVSSDRTEEEMYSYMKEAHGGWMSIDYKNSTLRGLLGSRLEVNGIPALVVVNLFDGSVMSRDARSEITSKGSAAFSIW 248          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Match: EMLSAG00000012306 (supercontig:LSalAtl2s:LSalAtl2s899:239151:239766:1 gene:EMLSAG00000012306 transcript:EMLSAT00000012306 description:"maker-LSalAtl2s899-augustus-gene-2.33")

HSP 1 Score: 50.447 bits (119), Expect = 2.194e-9
Identity = 23/52 (44.23%), Postives = 29/52 (55.77%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFY 69
            MD L   +L    G    +++ L    II + FSA WCPP RAF P+L DFY
Sbjct:    1 MDLLANVQLIKADGSEHSADSILXXAXIICFYFSAHWCPPCRAFTPVLKDFY 52          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81905245|sp|Q9D531.1|NXNL2_MOUSE (RecName: Full=Nucleoredoxin-like protein 2; AltName: Full=Rod-derived cone viability factor 2; Short=RdCVF2)

HSP 1 Score: 138.272 bits (347), Expect = 3.561e-41
Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEE---PLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162
            +D L G++L TR G VV +E AL +K + LY F+A  C PSR F P+L DFY+EL  E     P EVVFVS D + EEM  +M++ HG WLA+       ++LKK+Y++T +P ++V+ ++G +IT  GR +I E G   FQNW+ AA
Sbjct:    2 VDVLGGRRLVTREGTVVEAEVALQNKVVALY-FAAGRCSPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADGSAEEMLDFMRELHGSWLALPFHDPYRHELKKRYEITAIPKLVVIKQNGAVITNKGRKQIRERGLACFQNWVEAA 148          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|74747736|sp|Q5VZ03.1|NXNL2_HUMAN (RecName: Full=Nucleoredoxin-like protein 2; AltName: Full=Rod-derived cone viability factor 2; Short=RdCVF2)

HSP 1 Score: 125.176 bits (313), Expect = 4.628e-36
Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEE---PLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162
            +D L  + L T  G  V +E AL +K + LY F+A  C PSR F P+L DFY+ L  E     P EVVFVS D + +EM  +M++ HG WLA+       ++L+K+Y VT +P +++V ++G++IT  GR +I E G   FQ+W+ AA
Sbjct:    2 VDILGERHLVTCKGATVEAEAALQNKVVALY-FAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPYRHELRKRYNVTAIPKLVIVKQNGEVITNKGRKQIRERGLACFQDWVEAA 148          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|74731355|sp|Q96CM4.1|NXNL1_HUMAN (RecName: Full=Nucleoredoxin-like protein 1; AltName: Full=Thioredoxin-like protein 6)

HSP 1 Score: 89.7373 bits (221), Expect = 1.132e-21
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   42 DKKIILYLFSAKWCPPSRAFLPILVDFYSELSKE-----EEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAKA 164
            + +++L  F A  CP  +AF+PIL DF+  L+ E        L +V+VS D  +E+   ++KD    WL +     L  DL +Q+ V  +P+V+V+  DG ++TR G  EI   G   F NW  AA+ 
Sbjct:   31 ENRLVLLFFGAGACPQCQAFVPILKDFFVRLTDEFYVLRAAQLALVYVSQDSTEEQQDLFLKDMPKKWLFLPFEDDLRRDLGRQFSVERLPAVVVLKPDGDVLTRDGADEIQRLGTACFANWQEAAEV 158          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75327654|sp|Q7Y0F2.1|NRX12_ORYSJ (RecName: Full=Probable nucleoredoxin 1-2; Short=OsNrx1-2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.391e-20
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155
            +  + G  VP    +G  K +L  FSAKWCPP RAFLP LV+ Y+++ ++    E+VF+S D  Q     +       WLA+  G      L K +K+TG+PS++ +  DG+ +T+  ++ +  +G   F
Sbjct:  351 VLGKDGAKVPVSELVG--KTVLLYFSAKWCPPCRAFLPKLVNEYNKIKEKHNDFEIVFISSDREQSSYDEFFSGMP--WLALPLGDERKQQLSKIFKITGIPSLVAIGPDGKTVTKDAKTPLVAHGADAF 476          

HSP 2 Score: 77.411 bits (189), Expect = 4.740e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 0
Query:   45 IILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI--QQGTALANDLKKQYKVTGMPSVIVV-TKDGQLITRSGRSEITENGPKIF 155
            + LY FSA WCPP R F P L++ Y+EL  + +  EVVFVSGD +Q+    Y       WLA+      ALA  L ++YKV G+P ++++  K G++ T  G   + E G + +
Sbjct:   44 VALY-FSASWCPPCRRFTPKLIEAYNELVSQGKSFEVVFVSGDSDQDAFNAYFAKMP--WLAVPFSDSEALAK-LNERYKVMGIPHLVILDAKSGEIYTEDGVELVHEYGTEAY 153          

HSP 3 Score: 56.225 bits (134), Expect = 1.256e-8
Identity = 38/138 (27.54%), Postives = 62/138 (44.93%), Query Frame = 0
Query:   26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163
            L T  G  VP     G  K +   F      P   F  +L   Y +L    E  EVV VS D ++E       D    WLAI QG  +   L + ++++G+P ++++  DG+ +       I E+GP  ++ +  +A+
Sbjct:  188 LITNKGDKVPISDLEG--KYVGLCFVVNGYGPVVQFTSVLAKIYEKLKAVGEKFEVVMVSLDGDEESFNESFADMP--WLAIPQGDKMCEKLARYFELSGLPMLVLIGPDGKTLNDDIADIIDEHGPDAWEGFPFSAE 321          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75327653|sp|Q7Y0E8.1|NRX11_ORYSJ (RecName: Full=Probable nucleoredoxin 1-1; Short=OsNrx1-1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.808e-20
Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 0
Query:   10 EADLHIAPMDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155
            E+ L I  +D + G     + G  VP    +G  K +L  FSAKWC P RAFLP LVD Y+++ ++    E++F+S D +Q     +       WLA+  G      L K ++V G+PS++ +  DG+ + R  ++ +T +G   F
Sbjct:  333 ESLLVIGDLDFVLG-----KDGAKVPVSELVG--KTVLLYFSAKWCGPCRAFLPKLVDEYNKIKEKHNDFEIIFISSDRDQSSYDEFFSGMP--WLALPLGDERKQHLSKTFRVRGIPSLVAIGADGRTVARDAKTPLTAHGADAF 469          

HSP 2 Score: 74.7146 bits (182), Expect = 4.408e-15
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 0
Query:   45 IILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQ-QGTALANDLKKQYKVTGMPSVIVVTK-DGQLITRSGRSEITENGPKIF 155
            + LY FSA WCPP R F P L++ Y+EL  + +  EVVFVSGD +QE    Y       WLA+    +     L K++KV G+P ++++    G++ T  G   +T +G + +
Sbjct:   37 VALY-FSASWCPPCRRFTPKLIEAYNELVSQGKNFEVVFVSGDKDQEAFDAYFAKMP--WLAVPFSDSECRAKLNKRFKVRGIPHLVILNATSGEVYTEDGVELVTVHGTEAY 146          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81879196|sp|Q8VC33.1|NXNL1_MOUSE (RecName: Full=Nucleoredoxin-like protein 1; AltName: Full=Rod-derived cone viability factor; Short=RdCVF; AltName: Full=Thioredoxin-like protein 6)

HSP 1 Score: 82.4185 bits (202), Expect = 7.809e-19
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   42 DKKIILYLFSAKWCPPSRAFLPILVDFYSELSKE-----EEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163
            + +++L  F A  CP  +AF P+L DF+  L+ E        L +V+VS D  +E+   +++D    WL +     L  DL +Q+ V  +P+V+V+   G ++T     EI   GP  F NW  AA+
Sbjct:   31 ENRLVLLFFGAGACPQCQAFAPVLKDFFVRLTDEFYVLRAAQLALVYVSQDPTEEQQDLFLRDMPEKWLFLPFHDELRRDLGRQFSVRQLPAVVVLKPGGDVLTSDATEEIQRLGPACFANWQEAAE 157          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75318691|sp|O80763.1|NRX1_ARATH (RecName: Full=Probable nucleoredoxin 1; Short=AtNrx1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.913e-18
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 0
Query:   44 KIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155
            K IL  FSA WCPP RAF P LV+ Y ++ +  E  E++F+S D +QE    Y       WLA+  G      L K +KV G+P +  +   GQ +T+  R  +  +G   +
Sbjct:  364 KTILMYFSAHWCPPCRAFTPKLVEVYKQIKERNEAFELIFISSDRDQESFDEYYS--QMPWLALPFGDPRKASLAKTFKVGGIPMLAALGPTGQTVTKEARDLVVAHGADAY 473          

HSP 2 Score: 72.7886 bits (177), Expect = 2.005e-14
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALAND-LKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155
            L    G  V  ++ LG KKI LY FSA WC P + F P LV+ Y+ELS  +   E+VFVSGD+++E    Y +     WLA+    +   D L + +KV G+P++++V   G+L+  +G   I   G   +
Sbjct:   28 LVRNDGEQVKVDSLLG-KKIGLY-FSAAWCGPCQRFTPQLVEVYNELSS-KVGFEIVFVSGDEDEESFGDYFRKMP--WLAVPFTDSETRDRLDELFKVRGIPNLVMVDDHGKLVNENGVGVIRSYGADAY 153          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81908524|sp|P97346.1|NXN_MOUSE (RecName: Full=Nucleoredoxin; AltName: Full=Protein Red-1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.069e-15
Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   50 FSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI-QQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITEN 150
            FSA WCPP R+   +LV+ Y ++ +  +  E++FVS D ++E  K Y  +    WLA+     A  + L + Y + G+P++IV+   G++ITR GR E+  +
Sbjct:  200 FSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEM--PWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLND 299          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|82192783|sp|Q503L9.1|NXN_DANRE (RecName: Full=Nucleoredoxin)

HSP 1 Score: 75.8702 bits (185), Expect = 1.563e-15
Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   38 TALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQG-TALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEI 147
            TAL    + +Y FSA WCPP R+   +LV+ Y ++ +  +  E+VFVS D ++E    Y  +    WLA+     A  + L + Y + G+P++I++  +G +ITR GR EI
Sbjct:  172 TALEGSYVGVY-FSAHWCPPCRSLTRVLVESYRKVKETGQKFEIVFVSADRSEESFTQYFSEM--PWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTEGHMITRQGRVEI 279          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|187470901|sp|A6QLU8.1|NXN_BOVIN (RecName: Full=Nucleoredoxin)

HSP 1 Score: 75.0998 bits (183), Expect = 3.400e-15
Identity = 35/102 (34.31%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   50 FSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI-QQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITEN 150
            FSA WCPP R+   +LV+ Y ++ +  +  E++FVS D +++  K Y  +    WLA+     A  + L + Y + G+P++IV+   G++ITR GR E+  +
Sbjct:  200 FSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEDSFKQYFSEMP--WLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLND 299          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325269561|ref|XP_023349779.1| (nucleoredoxin-like protein 2 [Eurytemora affinis])

HSP 1 Score: 186.037 bits (471), Expect = 1.500e-57
Identity = 78/146 (53.42%), Postives = 112/146 (76.71%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163
            MD L GQ+L  + G VV +++AL DKKII + FSA WCPP R F P L +FY++L    EP E++F+S D++ EE+ TYMK+ HGDWLA+Q GT L+ DLKK+++V+G+P++I++ +D  LIT++GRSE+TE GP +FQ WL+A+K
Sbjct:    1 MDCLTGQQLLKKDGTVVSADSALADKKIIGFYFSAHWCPPCRLFTPALAEFYTDLVSNGEPFEIIFISSDNSPEELMTYMKESHGDWLAVQHGTVLSQDLKKKFQVSGIPTLIILNRDNDLITKTGRSEVTEKGPLVFQKWLAASK 146          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|669193549|gb|AII16480.1| (nucleoredoxin, partial [Paracyclopina nana])

HSP 1 Score: 158.688 bits (400), Expect = 7.727e-47
Identity = 67/141 (47.52%), Postives = 101/141 (71.63%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158
            M+H+ G+ L    G  VP+++AL  K ++L  FSA WCPP RAF P+L DFY E+  + E +E+VFVS D +Q +M++YMK+ HGDWLA++ G+ALA++LK ++ VTG+P +IV+  DG LIT+ GR+ ++  GP   ++W
Sbjct:    1 MEHIAGKNLVRADGSSVPADSALAGKSVVLIYFSAHWCPPCRAFTPVLKDFYEEV--QGEGVEIVFVSSDRSQADMQSYMKESHGDWLAVEHGSALASELKSKFGVTGIPCLIVLKADGTLITKDGRNAVSSKGPAAVKDW 139          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926650619|ref|XP_013791809.1| (nucleoredoxin-like protein 2 isoform X2 [Limulus polyphemus])

HSP 1 Score: 149.828 bits (377), Expect = 2.570e-43
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158
            M+ L+G  L  + G  V ++ AL +K II + FSA WCPP R F P+L D YSEL  E  P E++FVS D + ++M  YM + HGDWLAI   +  ++++K +Y +TG+P++++V KDG LI+++GR E+   GP+ FQNW
Sbjct:    1 MEFLQGGTLVKKNGCEVSADEALKNKDIIGFYFSAHWCPPCRGFTPVLADMYSELVDEGAPFEIIFVSSDRSADDMFQYMMESHGDWLAIPFQSGASSNVKAKYNITGIPALVIVKKDGTLISKNGRGEVQSLGPRAFQNW 141          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926612027|ref|XP_013794255.1| (nucleoredoxin-like protein 2 [Limulus polyphemus])

HSP 1 Score: 149.443 bits (376), Expect = 2.835e-43
Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWL 159
            MD ++GQKLF +    V ++  L DK+II + FSA WCPP RAF PIL + Y EL  E  P EVVFVS D ++++M +YM++ HGDWLA+Q    ++  L +++ V G+P+ I++ KDG +IT SG  E+TE G + F+ WL
Sbjct:    1 MDIIQGQKLFKKDKSEVDADEILQDKEIIGFYFSAHWCPPCRAFTPILTELYGELRNENAPFEVVFVSSDQSEDDMFSYMEESHGDWLAVQFDGDVSTKLSEKFAVDGIPTFIILKKDGTVITESGVEEVTEKGAEAFKEWL 142          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926650617|ref|XP_013791808.1| (nucleoredoxin-like protein 2 isoform X1 [Limulus polyphemus])

HSP 1 Score: 149.828 bits (377), Expect = 3.973e-43
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158
            M+ L+G  L  + G  V ++ AL +K II + FSA WCPP R F P+L D YSEL  E  P E++FVS D + ++M  YM + HGDWLAI   +  ++++K +Y +TG+P++++V KDG LI+++GR E+   GP+ FQNW
Sbjct:   22 MEFLQGGTLVKKNGCEVSADEALKNKDIIGFYFSAHWCPPCRGFTPVLADMYSELVDEGAPFEIIFVSSDRSADDMFQYMMESHGDWLAIPFQSGASSNVKAKYNITGIPALVIVKKDGTLISKNGRGEVQSLGPRAFQNW 162          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318111|ref|XP_023340804.1| (nucleoredoxin-like protein 2 isoform X1 [Eurytemora affinis])

HSP 1 Score: 145.976 bits (367), Expect = 7.756e-42
Identity = 67/144 (46.53%), Postives = 98/144 (68.06%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNWLS 160
            MD L GQ+L    G  V ++ AL DK+++LY FSA WCPP R F P+L DFY E+S  +E +E+VFVS D ++E+M +YMK+ HGDWLA +  + L N LK++Y V+G+P+++V  KDG +IT+ GR  +    P +  ++W S
Sbjct:    1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPMLKDFYEEVS--DEGVEIVFVSSDRSKEDMLSYMKESHGDWLATEHNSNLTNSLKQKYGVSGIPTLVVCKKDGTVITKDGRGHVMSKQPAQAVKDWKS 142          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|394985942|pdb|2LUS|A (Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin Related Protein 16 And Its Role In Regulating Transcription Factor Nf-kb Activity >gi|94483085|gb|ABF22607.1| 16 kDa thioredoxion [Carcinoscorpius rotundicauda])

HSP 1 Score: 145.976 bits (367), Expect = 7.911e-42
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158
            M+ ++G KL  +    V +  AL DK II + FSA WCPP R F PIL D YSEL  +  P E++FVS D ++++M  YM + HGDWLAI   +  A+++  +Y +TG+P++++V KDG LI+ +GR E+   GP+ FQNW
Sbjct:    1 MEFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQSLGPRAFQNW 141          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|241640786|ref|XP_002410928.1| (16 kDa thioredoxion, putative [Ixodes scapularis] >gi|215503626|gb|EEC13120.1| 16 kDa thioredoxion, putative [Ixodes scapularis])

HSP 1 Score: 145.976 bits (367), Expect = 7.964e-42
Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162
            M+  KG+ L  + G  VP+E  L  KK++   FSA WCPP R F PIL + Y E  + +EP E+VFVS D    EM  YMK+ HG+W  ++ G  L  +LK+++ ++G+P+++VV + G +IT  GRS+I+  GP+ F  WL AA
Sbjct:    1 MELFKGKTLVKKDGSEVPAEQVLSGKKVVGLYFSAHWCPPCRMFTPILAEAYEEAQEGDEPFEIVFVSSDRAASEMLNYMKESHGNWCGLKHGDPLVQELKQRFGISGIPTLVVVNESGLVITSDGRSDISSEGPRAFAKWLEAA 145          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318113|ref|XP_023340805.1| (nucleoredoxin-like protein 2 isoform X2 [Eurytemora affinis])

HSP 1 Score: 145.591 bits (366), Expect = 9.543e-42
Identity = 66/142 (46.48%), Postives = 97/142 (68.31%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNW 158
            MD L GQ+L    G  V ++ AL DK+++LY FSA WCPP R F P+L DFY E+S  +E +E+VFVS D ++E+M +YMK+ HGDWLAI+  + L N L ++Y+V G+P+++V  KDG +IT+ GR  +    P +  ++W
Sbjct:    1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPMLKDFYEEVS--DEGVEIVFVSSDRSKEDMLSYMKESHGDWLAIEHNSNLTNSLNEKYEVDGIPTLVVCKKDGTVITKDGRDHVMSKQPAQAVKDW 140          
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318115|ref|XP_023340806.1| (nucleoredoxin-like protein 2 isoform X3 [Eurytemora affinis])

HSP 1 Score: 145.206 bits (365), Expect = 1.324e-41
Identity = 66/142 (46.48%), Postives = 96/142 (67.61%), Query Frame = 0
Query:   18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNW 158
            MD L GQ+L    G  V ++ AL DK+++LY FSA WCPP R F P L DFY E+S  +E +E+VFVS D++ E+M +YMK+ HGDWLAI+  + L N L ++Y+V G+P+++V  KDG +IT+ GR  +    P +  ++W
Sbjct:    1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPKLKDFYEEVS--DEGVEIVFVSSDESNEDMLSYMKESHGDWLAIEHNSNLTNSLNEKYEVDGIPTLVVCKKDGTVITKDGRDHVMSKQPAQAVKDW 140          
The following BLAST results are available for this feature:
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000046761.350e-2539.58supercontig:LSalAtl2s:LSalAtl2s244:183507:188860:-... [more]
EMLSAG000000123062.194e-944.23supercontig:LSalAtl2s:LSalAtl2s899:239151:239766:1... [more]
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BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
gi|81905245|sp|Q9D531.1|NXNL2_MOUSE3.561e-4145.95RecName: Full=Nucleoredoxin-like protein 2; AltNam... [more]
gi|74747736|sp|Q5VZ03.1|NXNL2_HUMAN4.628e-3641.89RecName: Full=Nucleoredoxin-like protein 2; AltNam... [more]
gi|74731355|sp|Q96CM4.1|NXNL1_HUMAN1.132e-2135.16RecName: Full=Nucleoredoxin-like protein 1; AltNam... [more]
gi|75327654|sp|Q7Y0F2.1|NRX12_ORYSJ1.391e-2033.85RecName: Full=Probable nucleoredoxin 1-2; Short=Os... [more]
gi|75327653|sp|Q7Y0E8.1|NRX11_ORYSJ3.808e-2032.88RecName: Full=Probable nucleoredoxin 1-1; Short=Os... [more]
gi|81879196|sp|Q8VC33.1|NXNL1_MOUSE7.809e-1932.28RecName: Full=Nucleoredoxin-like protein 1; AltNam... [more]
gi|75318691|sp|O80763.1|NRX1_ARATH8.913e-1835.71RecName: Full=Probable nucleoredoxin 1; Short=AtNr... [more]
gi|81908524|sp|P97346.1|NXN_MOUSE1.069e-1535.29RecName: Full=Nucleoredoxin; AltName: Full=Protein... [more]
gi|82192783|sp|Q503L9.1|NXN_DANRE1.563e-1536.04RecName: Full=Nucleoredoxin[more]
gi|187470901|sp|A6QLU8.1|NXN_BOVIN3.400e-1534.31RecName: Full=Nucleoredoxin[more]

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BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325269561|ref|XP_023349779.1|1.500e-5753.42nucleoredoxin-like protein 2 [Eurytemora affinis][more]
gi|669193549|gb|AII16480.1|7.727e-4747.52nucleoredoxin, partial [Paracyclopina nana][more]
gi|926650619|ref|XP_013791809.1|2.570e-4345.39nucleoredoxin-like protein 2 isoform X2 [Limulus p... [more]
gi|926612027|ref|XP_013794255.1|2.835e-4347.18nucleoredoxin-like protein 2 [Limulus polyphemus][more]
gi|926650617|ref|XP_013791808.1|3.973e-4345.39nucleoredoxin-like protein 2 isoform X1 [Limulus p... [more]
gi|1325318111|ref|XP_023340804.1|7.756e-4246.53nucleoredoxin-like protein 2 isoform X1 [Eurytemor... [more]
gi|394985942|pdb|2LUS|A7.911e-4245.39Chain A, Nmr Structure Of Carcinoscorpius Rotundic... [more]
gi|241640786|ref|XP_002410928.1|7.964e-4243.4516 kDa thioredoxion, putative [Ixodes scapularis] ... [more]
gi|1325318113|ref|XP_023340805.1|9.543e-4246.48nucleoredoxin-like protein 2 isoform X2 [Eurytemor... [more]
gi|1325318115|ref|XP_023340806.1|1.324e-4146.48nucleoredoxin-like protein 2 isoform X3 [Eurytemor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold375_size191602supercontigscaffold375_size191602:119201..121940 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold375_size191602-snap-gene-0.38-mRNA-1maker-scaffold375_size191602-snap-gene-0.38-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold375_size191602:119201..121940-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold375_size191602-snap-gene-0.38 ID=maker-scaffold375_size191602-snap-gene-0.38|Name=achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity|organism=Tigriopus kingsejongensis|type=gene|length=2740bp|location=Sequence derived from alignment at scaffold375_size191602:119201..121940- (Tigriopus kingsejongensis)
GTTGGATGTTGAACAACATTGTAAATCGGAGGCGGATTTGCACATTGCAC CCATGGATCACCTCAAAGGGCAAAAGCTTTTCACACGCACTGGAGGCGTG GTGCCCAGTGAGACGGCTCTCGGCGATAAGAAGATCATCCTCTACTTGTT CTCTGCTAAATGGTGTCCACCCTCTCGGGCCTTCCTTCCCATCCTAGTGG ATTTCTACAGCGTAAGTTGGTGCGAAAACCGAGCCATTGGGACCCCCCAG AGATCACTGAGTTTAATTGTCCATCAATCTGGGTGGATTTTATGTATACT GTACGTCTTAGCGATGACGATACACATTGCCTCCCTCGTTTCTCCTACCG AACTCAATCTTGAAGTACGTCTGTAATTGTCGGATATTTCCTCCCCCCAA AATAATGACACATACCGTATAACAAGTCGGAAGTAAGTTGATTCCGTATA TTGCGTGATGAGTCAAGATACATTCTGGAAGAAATTTGATTTGGTAAGAA TTTCATGAACCGTATTTTCAATGTTTGCTCTTGAATAAAACTGAATTAGT GTAAAAAGAATTAGTGTAGAGAGAAATGCGTACAGTATAGTCAAGTTTGG TATTTTTATAAGGTTTAGTTGATCCATTATCACATACAGATAAATATAAG CCATTATAATATAGTAAAAATATAATTAAACTATGATTTAACATTAGCAT GTAACTATAAGCCATTGTCACACAGGATTAAGCCAGCACATTCAGCTTCA TGGCAAACTGCAATGAAATTGGAACAAAGGTATGTTCTGTTTCGTGCAAA GTAGAAATCAAATTTTCATTAAACGGTCATTAATCTTTACGTACACATAC ATGCGAAACAAAAACTTCAACAAATAAGTTGCAAAGAAGCGACAATGTCG TGGATTGAGACAGTGAGAAAAAGTGCCTCTGCCTCCAGTGAGAGTCGAAC TCACGACCCCTGGTTTACGAGACCAGTGCTCTGCCACTGAGCTATAGAGG CTTGCTGTACAAGTCAGGAAGGAACGTAAATAATTGTAAGGCGGGTTTGC CAATGAAAGTCTAGGTCTGGGTGCAAATTTACACAAATGTACGATTGGAC ACCTTCCCTGTTCTCTAGGGGATTGCTTAGCATTTCTGCTTGAGCGACTT AACACCAAACAAGATGGGTTAATTGATCTAGAGGAGTTCCGATCAACCAT GAAGCTGGGAATCAATTATTCCAGGTTGCTCATAATTCGTTTTATGATTT GCTTGGTATAATATCGATCCAGATAGTGCATCCAAGTCCTTACAGTATTT AAAAGGCACCTGTCATTAAACTTCACAAAATGAAGACACCTTTGTATGGA GTCCCAATAAATGCCCAATTACGAATGTTCTCCTTCATGTCGGTTTGAAA GGACTTAAATGGTGAAGGACGACACACATGCGTAGTTCTGGGCTTTACTT TCAGGCCAAATTACTAAGGCATACCAAGGATGTTGCTTGATCGAGGTCGG GTGAACCTAACTTGACCTCACCCATGAAACTGCTCCTGTCACACGATTTG CCCTCTTGAAGCAATTTAGTGCCATTAGAGGATGCTAAGTCAACAGCGAG ACACATCCAACACATTGTGTTCTATTGTCAAAGTTCGCTCTTTTTTAAGA CTGAGTATTTTGAGTTCTTCACTTTGGAAACTTTGTATTTCAGGAGCTGA GTAAGGAGGAGGAACCTCTTGAGGTTGTATTTGTGAGTGGTGATGACAAT CAGGAGGAAATGAAGACCTACATGAAAGATCATCACGGAGATTGGTTGGC CATCCAACAAGGCACTGCCCTGGCCAAGTAAGAATTCCCATTCACTATGG AATAACCAACATTGTGTAGTAATCCACATAATATACATACACCGCGGCTG AACCACAAAACGTCGCTACAAGGAAAATTTCTACTCAATTGAGCCGTTCT AATCCAGAATAATCAAGCGAGCAACTATTTGGTCAGTCAAAAGTTATCTC TTACAAGTGTAAGCAAAATACGAACGCGAAAACTCTCATCTTTTGGCATG TGTTGTACTTTTTGCTTCTTTTGGCACATTTTTGCCCGTTTGGTCTGCTT TAAATGGGATAGGTGCCGACCCAAATCACCTTCTTTCTTCTAATCCCCAT TGTTGAAGGCAAAGAGTTGCCAAAGACACAAAGCTTTCAAAGCATTTGAT CAGTGTACAAGATACTGCTTATCAATAAATAAGTGCAAAGTACCAGCTTG GCTCATATACACTATCCTGAGAACGCCACCCCTCCAGAATTGAAAGAGGG TCATTTTGAGATTCTCTCCCCTTGGTAGACCCTAAGGTGTTTGAATAAAT CGCCCAATACGCGAAAATCCACGAGATTTAATAATCTATTGGGGATCACG ATCCTTGTTAATGATATACCTAGACAGTTTCATTATTTCACATTGCTTTT ATCCCCGTGACAGCGGCAGAGTTGTACTTTAAGGTTAAAATCATGGCCGA AGCACCGATCCAAAGCATTTGTACTACAGTATCTGCACATATTTATAATT AAGATAGTACGTACTACCACGGTGATTCCGTTTCAGCGATTTGAAGAAGC AGTACAAAGTCACTGGAATGCCTTCCGTCATCGTGGTCACCAAAGATGGA CAACTCATTACCCGTTCGGGGAGGTCGGAGATCACCGAAAATGGGCCCAA GATATTCCAAAACTGGCTGAGTGCGGCCAAAGCCTCCTAA
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Synonyms
The feature 'achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity' has the following synonyms
Synonym
Tk05042
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