dna repair protein complementing xp-g cells-like protein, maker-scaffold382_size189932-snap-gene-0.25 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna repair protein complementing xp-g cells-like protein vs. L. salmonis genes
Match: EMLSAG00000011157 (supercontig:LSalAtl2s:LSalAtl2s759:74481:78170:1 gene:EMLSAG00000011157 transcript:EMLSAT00000011157 description:"augustus_masked-LSalAtl2s759-processed-gene-0.0") HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0 Identity = 397/1145 (34.67%), Postives = 606/1145 (52.93%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPP-PQLKRDTLFRRRQRKSRASRQ-SDASRAKLIDNFLRSQVVAQQLQRQSQV-----VDRVAERGQEELASLLSQRSHPKK---ERDLFELPAM-----VQTEEDAWSSSDSEKEDIMAKLDIHNHT----DIHQIDVNSPKFQALPKHRQVEVLMELREKRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQTAMAIDDHKLFVGDRAGLKRQKLEA----------KRTIQGRDFVYLD-GLKAATPPEP-TSSQGGKMDTIPEVRELQTDSESGEDDLDRAVAESLAQSNELSQDDLLA----------------------LAEKNADHAALDGDGGD----DDIMIIEPTLSSLQSSRRGGFRLPIIKAEVAMSDSDEADDPQPSTSAAPCPIPPSQPRAIEIAGEVPKPKAIEVVVDVSKPPEHDIFADIFDTTADARPSVEIMEDSEDSDDMFPDIFKPKGGADPKGLDAILSQALVKPD---------------------------AKANTVEEARLESDSTVELFAQIAKKARKVEVE----EVVKSANPIEVTQKMKSSDHLFLKIASKYA---EEHVEEI--NESSNSAKAKPDVQSDLEVKLEEERETLVREMQSQGQEARLLMAKGVTSSSDKASPNPPAQRAKRLSRDEESLLESLKVATQDKESYAQDLLKDEERTVEEKASGVVYGSSAPGFLRSGSS---RVVEIEPFSTKHLEPTDLDESIARKMELQDQEN----PENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRERVALPDKGHYQNSKRMKSAIDKVLGKKS 1045 MGV GLW++L+P G+ + +E+L +++LA+D+S+WL+Q+VKGFR+ + + AH+LGLFHR+CKLLFY I+PVFVFDG PQLK++TL +RR R ++ + +++ R K I L +QV Q++ Q+ V + + + GQ+ L+SLLS+R+ + E+DLFELP + + ED SD ++E + K + + DIH +D+ S FQ+LPK Q +L E++EKRK NSWAKM MPK+A NFS FQ+ RL+KR+ +Q+ + V +EL + + D LFVGD+ GLK ++L + +R + D ++ G+ P P TS + E ++ +D ++ E L + +A++ QS+E+ +D+ +K A H + + DD I+ P++ + R+GG + DDP P TS + A E P EV V S E D I T A A S+D+F D+F K + LD IL Q VKP +T A L + S F Q + K + + +V+K E++ MK+SDHL+LKIASKY E +E NES S + K V + + L +E + L++EM S +E+RLL + V +++ ++ + + V+GS+APG++RSG S + V++EP S + L +Q++ N EN L +L +Q +LA+++ +IAE KQER+A SI+DQ Y + Q+LLQ+FG+P++VAP EAEAQCA+L+ LT+GT+TDDSD+WVFG + V+KNFF ++K E+F+++E+ Q LGL++ +MI IA+LTGSDYT G+ +VGP+TA+E+LAEF G LEPL F +W + +N + P ++++E ++L L FP+ ++ AY P VD S E F+WA+PNFV I DYA +KFG+ KVDE++ P++K+ K Q RID YF + + + K SKR SAI++V GKK+ Sbjct: 1 MGVQGLWSILEPTGKVISVETLENQILAIDISLWLHQSVKGFRNPGADGV--AHILGLFHRLCKLLFYGIRPVFVFDGRNIPQLKKETLLKRRLRNKKSKEKVAESLRTKAILGHLMTQV--SQIKSQNSVNATITMQKALKHGQKGLSSLLSRRTGSNQNPNEKDLFELPPVPSRSGISENED----SDIDEEILNCKFKKSSSSIIVDDIHDVDIKSSYFQSLPKDEQYNILFEMKEKRKMNSWAKMDAMPKKADNFSDFQVQRLLKRANIQKTMVNVEKELGDRELDLIDPHLFVGDKKGLKAKRLASDNKTTIIYGSRRRQEQEDLKKIEKGIVKVDPDCPGTSISENNSASTDESLQMYSDVQTQEALL-QMIADNRDQSSEIKDEDIYTQEVLLQSFKSNSTVIKDEIDDMYMQKEALHQMITDSKREEIIEDDFFILAPSVMQYCNQRQGG----------KTVEKSNDDDPIPGTSTSLFS-----------AQEEPNGNT-EVGVMSSSSDESDNNGQI-QTKATAM-----------SEDIFGDVFNDKNNIEE--LDKILLQKSVKPTMLRKRPIQRSHSCSASSSGNESSCPPSPLPSTSLNATLVTSS---FFNQTXPDSSKSDDQPPNYDVIK-----EISTSMKNSDHLYLKIASKYVPFKETTSQESSKNESCVSNEDKS-VHNTMAESLRKEGDCLIKEMNSSEKESRLLQYQNVNYTTN---------------------------------------------AIQSEKNDTVFGSAAPGYIRSGKSINVQEVDVEP-SAEAL--------------IQEKSNLFADDENRLDVRDLISLQNKLAKERETIIAEASKQERLAXSITDQXYQEXQELLQIFGIPYVVAPGEAEAQCAYLENIKLTNGTVTDDSDVWVFGSRKVYKNFFEREKFVEYFSSSEIEQKLGLTQGKMISIAMLTGSDYTEGIYNVGPITALEILAEFQGEELEPLSEFKNWLEDYKQNDFSKPVSRVRENFKKLDLIDGFPSPIILDAYKSPLVDKSDEKFTWAIPNFVAIRDYATEKFGFTYGKVDEMLSPIVKRISAKSLQTRIDNYFVSDTLNVNQKEMI--SKRGLSAIERVKGKKA 1029
BLAST of dna repair protein complementing xp-g cells-like protein vs. L. salmonis genes
Match: EMLSAG00000004854 (supercontig:LSalAtl2s:LSalAtl2s256:392225:393567:-1 gene:EMLSAG00000004854 transcript:EMLSAT00000004854 description:"maker-LSalAtl2s256-augustus-gene-4.14") HSP 1 Score: 81.2629 bits (199), Expect = 2.808e-16 Identity = 60/244 (24.59%), Postives = 112/244 (45.90%), Query Frame = 0 Query: 776 KQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNF-FNQDKH--CEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEA-FSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQ 1015 KQ R S + + LL++ G+P + AP EAEAQCA L GL G T+D D FG + ++ F++ + + F ++V + GL++E I + +L G DY + +GP +A ++++E K+ EN +K + ++P + + ++ P V E W P+ + + ++ G+ + ++ K ++K +QGR+DG+F+ Sbjct: 126 KQARRLVKXSSVHVEEAKTLLKLMGVPTVSAPCEAEAQCAELSKGGLVYGVGTEDMDSLTFGTTILLRHLTFSEARKMPIKEFHIDKVLEGFGLTQEEFIDLCILLGCDYCDKIRGIGPKSAFKLMSE----------------HKSIENLIKNLDSK------KYSIPENWMFAEARKLFVHPEVTPCSEINLKWEKPDEEGLIKFMCEEKGFAEDRIRNGAKKLLKARQGS-TQGRLDGFFK 346 HSP 2 Score: 61.6178 bits (148), Expect = 4.871e-10 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0 Query: 1 MGVTGLWTVL-DPAGQPVP---LESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHA------HVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRA 98 MG+ GL ++ D + + V +++ + +A+D S+ L Q + R GN L +A H++G F+R +++ IKPV+VFDG PP LK L +R +++S A Sbjct: 1 MGILGLSKLIADVSPEAVKENEIKNYFGRKVAIDASMSLYQFLIAVRGDGGNQLTNADGETTSHLMGTFYRTIRMIENGIKPVYVFDGKPPNLKSGELEKRSEKRSEA 108
BLAST of dna repair protein complementing xp-g cells-like protein vs. L. salmonis genes
Match: EMLSAG00000005181 (supercontig:LSalAtl2s:LSalAtl2s273:482678:485614:1 gene:EMLSAG00000005181 transcript:EMLSAT00000005181 description:"maker-LSalAtl2s273-augustus-gene-4.18") HSP 1 Score: 68.5514 bits (166), Expect = 5.852e-12 Identity = 35/120 (29.17%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 788 MYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQN-VFKNFF---NQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYT-LGVESVGPVTAMEVLAEFP 902 + +C++++ G P++ +P EAE C ++++ + +T+DSD++ +G V++NF + E + + ++ + LGLSR+RM+++++L G DY GV VG T M + +P Sbjct: 107 LIKECKEMIDALGFPFVESPGEAEGFCVQMNLDAV----VTEDSDVFCYGSXIIVWRNFSITGGKSFSVERYDSKKIERLLGLSRDRMLMLSILLGCDYFPSGVPGVGKETVMNLFNLWP 222
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|205371791|sp|P28715.3|ERCC5_HUMAN (RecName: Full=DNA repair protein complementing XP-G cells; AltName: Full=DNA excision repair protein ERCC-5; AltName: Full=Xeroderma pigmentosum group G-complementing protein) HSP 1 Score: 282.722 bits (722), Expect = 1.278e-77 Identity = 134/285 (47.02%), Postives = 196/285 (68.77%), Query Frame = 0 Query: 754 EELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPG---TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRERVALPDKGHYQNSKRMKS 1035 EEL+ ++ L QN L A++ +QER+AA+++ QM+ + Q+LL++FG+P+I AP EAEAQCA LD+ TSGTITDDSDIW+FG ++V++NFFN++K E++ + LGL R ++I +A L GSDYT G+ +VG VTAME+L EFPG GLEPL F++WW + +N P TK+K+KLR L L P FPN V +AY++P VD+S +F W P+ +I ++ Q FGW + K DE + PV+K+ + +Q RID +F R+A +K +++KR+KS Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTKVKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQLDAQQTQLRIDSFF---RLAQQEK---EDAKRIKS 1012 HSP 2 Score: 175.252 bits (443), Expect = 3.691e-43 Identity = 112/326 (34.36%), Postives = 182/326 (55.83%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKERDLFELPAMVQTEEDAWSSSD--------SEKEDIMAKLDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELRE--KRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQTAMAIDDHKLFVGDRAGLKRQKLEAKRTIQ--GRDFVYLDGLKAATPPE 314 MGV GLW +L+ +G+ V E+L K+LAVD+SIWLNQA+KG RD+ GN + + H+L LFHR+CKLLF+RI+P+FVFDG P LK+ TL +RRQRK AS S + KL+ FL+ Q + + + E L SL R +E DL+ LP + + E+ + D ++K+ + + HN ID+ S F +LP + E+L +++E KR++ + MP+E+ +FS +Q+ L+K++ L + + V +E++Q + D G ++ +E++R + ++ + G++A T E Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFR----------SKRDEALPSLTQVR----RENDLYVLPPLQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNP---QAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLF---EAMPEESDDFSQYQLKGLLKKNYLNQHIEHVQKEMNQQHSGHIRRQY--EDEGGFLKE-VESRRVVSEDTSHYILIKGIQAKTVAE 302
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|408360334|sp|P35689.4|ERCC5_MOUSE (RecName: Full=DNA repair protein complementing XP-G cells homolog; AltName: Full=DNA excision repair protein ERCC-5; AltName: Full=Xeroderma pigmentosum group G-complementing protein homolog) HSP 1 Score: 280.026 bits (715), Expect = 9.066e-77 Identity = 137/311 (44.05%), Postives = 200/311 (64.31%), Query Frame = 0 Query: 739 MELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHEN---FHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRERVALPDK--GHYQNSKRMKSAIDKVLGKK 1044 ++ +D N + EEL ++ L +QN L A++ +Q+R+AAS++ QM+ + Q+LL++FG+P+I AP EAEAQCA LD+ TSGTITDDSDIW+FG ++V+KNFFN++K E++ + LGL R ++I +A L GSDYT G+ +VG VTAME+L EFPG GL+PL F++WW + N P TK+K+KLR+L L P FPN V AY++P VD+S +F W P+ +I + Q FGW + K DE + PV+K + +Q RID +F R+A +K S R+ A+ +L K+ Sbjct: 718 IDAEDMPNEWQDINLEELDALESNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPNPAVADAYLRPVVDDSRGSFLWGKPDVDKISTFCQRYFGWNRMKTDESLYPVLKHLNAHQTQLRIDSFF---RLAQQEKQDAKLIKSHRLNRAVTCILRKE 1025 HSP 2 Score: 175.252 bits (443), Expect = 3.727e-43 Identity = 103/277 (37.18%), Postives = 161/277 (58.12%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKERDLFELPAM--------VQTEEDAWSSSDSEKEDIMAKLDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELRE--KRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQ 267 MGV GLW +L+ +G V E+L KVLAVD+SIWLNQA+KG RD GNV+ +AH+L LFHR+CKLLF+RI+P+FVFDG P LK+ TL +RRQRK AS S + KL+ FL+ Q + + + E L+Q +++ D++ LP + + +E W + +K+ + + HN ID+ S F +LP + E+L +++E KR++ + MP+E+ +FS +Q+ L+K++ L + + V +E++Q Sbjct: 1 MGVQGLWKLLECSGHRVSPEALEGKVLAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFR-----------SSRHEAPPSLTQV---QRQDDIYVLPPLPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNP---QAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLF---EAMPEESNDFSQYQLKGLLKKNYLNQHIENVQKEMNQ 256
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|267421|sp|P14629.1|ERCC5_XENLA (RecName: Full=DNA repair protein complementing XP-G cells homolog; AltName: Full=Xeroderma pigmentosum group G-complementing protein homolog) HSP 1 Score: 275.789 bits (704), Expect = 2.561e-75 Identity = 133/282 (47.16%), Postives = 195/282 (69.15%), Query Frame = 0 Query: 740 ELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWW---KKNHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRER 1018 +L D N ++ EEL+ ++ L Q L A++ +QER+AA+++ QM + Q+LLQ+FG+P+IVAP EAEAQCA LD+ TSGTITDDSDIW+FG ++V+KNFF+Q+KH E++ ++ LGL R ++I +A L GSDYT G+ +VG V+AME+L EFPG GLEPL F +WW +K+ + P TK+K+KLR L L +FPN V AY++P VD S AFSW P+ +I ++ + +FGW + K DE++ PV+K+ + + +Q RID +F+ E+ Sbjct: 753 DLDDVSNEWQDISVEELESLENNLYVQQTSLQAQQQQQERIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSQNKHVEYYQYADIHNQLGLDRSKLINLAYLLGSDYTEGIPTVGYVSAMEILNEFPGQGLEPLVKFKEWWSEAQKDKKMRPNPNDTKVKKKLRLLDLQQSFPNPAVASAYLKPVVDESKSAFSWGRPDLEQIREFCESRFGWYRLKTDEVLLPVLKQLNAQQTQLRIDSFFRLEQ 1034 HSP 2 Score: 178.718 bits (452), Expect = 3.432e-44 Identity = 102/274 (37.23%), Postives = 162/274 (59.12%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKE-RDLFELPAMVQTEEDAWSSSDSEKEDIMA----KLDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELRE--KRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQ 267 MGV GLW +L+ +G+P+ +L K+LAVD+SIWLNQAVKG RD+ GN + +AH+L LFHR+CKLLF+RI+P+FVFDG P LKR TL +RRQR +AS + + KL+ FL+ Q + L Q EEL S P+KE DL+ LP + E ++ + + + +L + +D+ S +F++LP + E+L ++++ KR++ + MP+++ +FS +Q+ L+K++ L + + V +EL+Q Sbjct: 1 MGVQGLWKLLECSGRPINPGTLEGKILAVDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKRQTLAKRRQRTDKASNDARKTNEKLLRTFLKRQAIKAALSGNKQ--------SNEELPSF---SQVPRKETEDLYILPPLEDNENNSSEEEEEREWEERMNQKQRLQEDFFANPSSVDIESEEFKSLPPEVKHEILTDMKDFTKRRRTLF---EAMPEDSSDFSQYQLKGLLKKNDLNKCIDNVRKELNQ 260
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|13432230|sp|P28706.2|RAD13_SCHPO (RecName: Full=DNA repair protein rad13) HSP 1 Score: 205.682 bits (522), Expect = 8.327e-53 Identity = 103/304 (33.88%), Postives = 177/304 (58.22%), Query Frame = 0 Query: 760 QEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKK------NHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKI---SQGRIDGYFQ--RERVALPDKGHYQNSKRMKSAIDKVLGKKSVAGPKSK 1052 QE + +L ++ ++R A ++ M +CQ+LL++FGLP+IVAP EAEAQC+ L L G +TDDSD+++FGG V++N FNQ+K E + +++ + +++ +I +A L GSDYT+G+ VGPV A+E+L EFPG LF F W+++ + + + P ++ + + ++ LP FPN V +AY+ P+VD+S ++F W +P+ E+ + GW K + +E++ PVI+ H K +Q + +F+ V P ++ SKR+++A+ + S P S+ Sbjct: 728 QEAFEKRLKELKNQKRSEKRDADEVTQVMIKECQELLRLFGLPYIVAPQEAEAQCSKLLELKLVDGIVTDDSDVFLFGGTRVYRNMFNQNKFVELYLMDDMKREFNVNQMDLIKLAHLLGSDYTMGLSRVGPVLALEILHEFPGDT--GLFEFKKWFQRLSTGHASKNDVNTPVKKRINKLVGKIILPSEFPNPLVDEAYLHPAVDDSKQSFQWGIPDLDELRQFLMATVGWSKQRTNEVLLPVIQDMHKKQFVGTQSNLTQFFEGGNTNVYAPRVAYHFKSKRLENALSSFKNQISNQSPMSE 1029 HSP 2 Score: 152.14 bits (383), Expect = 5.215e-36 Identity = 95/284 (33.45%), Postives = 155/284 (54.58%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQ-VVAQQLQRQSQVVDRVAERGQEELAS-----------LLSQRSHPKKERDLFELPAMVQTEEDAWSSSD---------SEKEDIMAKLDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELREK---RKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHE 260 MGV+GLW +L+P +PV LE+L +K LA+D SIW+ Q +K RDK GN L +HV+G F R+CKLLF+ IKPVFVFDG P LKR T+ +R+ R+ + + KL+ +R Q ++ ++ +++ + + + + ++ S +L+QR + K D ++LP M + + SS D ++ K++ N D ID +S FQ+LP + +L R + R S ++ EM +FS FQ++RL +R+ L ++L + Sbjct: 1 MGVSGLWDILEPVKRPVKLETLVNKRLAIDASIWIYQFLKAVRDKEGNQLKSSHVVGFFRRICKLLFFGIKPVFVFDGGAPSLKRQTIQKRQARRLDREENATVTANKLLALQMRHQAMLLEENNKKATALANASVQNERQMPSSMTLDNSEIKPVLNQRKNYLKP-DPYQLPEMDVSFDKLGSSYDPRIMSQDELTQYVSSFTKIEDINLFDFSNIDFDSELFQSLPDTDKYSILSAARLRSRLRMGLSSEQLSEMFPNRMDFSRFQIERLKERNDLTQRLMD 283
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|56749787|sp|Q9ATY5.1|UVH3_ARATH (RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltName: Full=XPG homolog) HSP 1 Score: 205.297 bits (521), Expect = 2.616e-52 Identity = 112/318 (35.22%), Postives = 178/318 (55.97%), Query Frame = 0 Query: 763 LAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENF----HAPPGTKLK---------------------EKLRRLTL------------PPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQ-RERVALPDKGHYQNSKRMKSAIDKVLG 1042 L Q+ L E+ K ER A S+S +M+A+CQ+LLQ+FG+P+I+AP EAEAQCAF++ + L G +TDDSD+++FG ++V+KN F+ K+ E + ++ + LGLSR+++I +A+L GSDYT G+ +G V A+EV+ FP + L F +W + A G+K+K E+++++ + P TFP+E V+ AY+ P VD S E FSW P+ + +KF W K DE++ PV+K++ + +Q RI+ ++ ER A SKR+ A+ + G Sbjct: 900 LDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEE--DGLQKFREWVESPDPTILGKTDAKTGSKVKKRGSASVDNKGIISGASTDDTEEIKQIFMDQHRKVSKNWHIPLTFPSEAVISAYLNPQVDLSTEKFSWGKPDLSVLRKLCWEKFNWNGKKTDELLLPVLKEYEKRETQLRIEAFYSFNERFA------KIRSKRINKAVKGIGG 1209 HSP 2 Score: 128.642 bits (322), Expect = 1.101e-28 Identity = 56/122 (45.90%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQ 122 MGV GLW +L P G+ V +E+LA+K LA+D SIW+ Q +K RD+ G+++ +AH++G F R+CKLLF R KP+FVFDG P LKR T+ RR+++ A + + KL+ N L+ + +Q Sbjct: 1 MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFRRICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDIRLKEQ 122
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|131811|sp|P07276.2|RAD2_YEAST (RecName: Full=DNA repair protein RAD2) HSP 1 Score: 179.104 bits (453), Expect = 1.683e-44 Identity = 104/290 (35.86%), Postives = 164/290 (56.55%), Query Frame = 0 Query: 767 QNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENF---HAPPGTKLKEKLRR------LTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFH---VKISQGRIDGYFQRERVALPDKGHYQNSKRMKSAIDKVLGKK 1044 +++L ++ K +R + ++ M + Q+LL FG+P+I AP EAEAQCA L L G ITDDSD+++FGG ++KN F++ + E + A + + LGL R+ MI +A L GSDYT G++ +GPV+++EV+AEF L F DW+ N+ F K ++ LR+ + L FP+ V AY++P VD+ F W VP+ + + + + GWP K DEI+ P+I+ + K Q RI+ +F RE ++ K SKR+ +A K+ +K Sbjct: 750 EDELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEFGN-----LKNFKDWY--NNGQFDKRKQETENKFEKDLRKKLVNNEIILDDDFPSVMVYDAYMRPEVDHDTTPFVWGVPDLDMLRSFMKTQLGWPHEKSDEILIPLIRDVNKRKKKGKQKRINEFFPREYISGDKK--LNTSKRISTATGKLKKRK 1030 HSP 2 Score: 149.828 bits (377), Expect = 2.577e-35 Identity = 94/263 (35.74%), Postives = 145/263 (55.13%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKERDLFELPAMVQTEEDAWSSSDSEKEDIMAKLDIHNHTDIHQIDVN--SPKFQALPKHRQVEVLMELREK---RKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKL 258 MGV W + P +PV LESL K +AVD SIW+ Q +K RD+ GN + ++H+ G F R+CKLL++ I+PVFVFDG P LKR+T+ +R++R+ + R+S S A+ +++A QLQ S D V +S+ Q P+ E DL ++P +EDA +S+ E +M ++ DI +N S +F+ LPK Q +L LR K R S ++ + + +FS FQ+D + +R+ +KL Sbjct: 1 MGVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERR-QGKRESAKSTAR--------KLLALQLQNGSN--DNVKNSTPSSGSSV--QIFKPQDEWDLPDIPGFKYDKEDARVNSNKTFEKLMNSINGDGLEDIDLDTINPASAEFEELPKATQYLILSSLRLKSRLRMGYSKEQLETIFPNSMDFSRFQIDMVKRRNFFTQKL 250
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|166221585|sp|Q8BMI4.2|GEN_MOUSE (RecName: Full=Flap endonuclease GEN homolog 1) HSP 1 Score: 99.7525 bits (247), Expect = 6.966e-20 Identity = 48/145 (33.10%), Postives = 82/145 (56.55%), Query Frame = 0 Query: 774 RGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFF--NQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYT-LGVESVGPVTAMEVLAEFPGAGLEPLFAFADW 915 + + ++ S + +C ++L+ G+PW+ A EAEA CA+L+ +G G +T+D D +++G Q V++NF +D H + +T + + LGL R+ ++ +A+L G DY GV VG A+++L F G L L F W Sbjct: 99 KSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLQIFKGQSL--LQRFNQW 241 HSP 2 Score: 70.0922 bits (170), Expect = 8.030e-11 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRA 107 MGV LW +L+P Q + L+ L+ K +AVD+S+W+ +A + + G V H+ LF R+ L +K VFV +G PP LK D + +R Q + S +S + + Sbjct: 1 MGVNDLWQILEPVKQHIHLQDLSGKTIAVDLSLWVCEA-QTVKKMIGTV-KKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVISKRTQTRYGPSGKSRSQKT 105
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|317376196|sp|A4VDN2.1|FEN1_TETTS (RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1) HSP 1 Score: 95.5153 bits (236), Expect = 1.825e-19 Identity = 76/282 (26.95%), Postives = 126/282 (44.68%), Query Frame = 0 Query: 735 IARKMELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSV-DNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQ 1015 +AR+ + +D E E T E +QE L Q+Q L I+ +M AD LLQ+ G+P I+AP EAEAQCA L T+T+D D F + +N ++ + ++ Q L LS + + +L G DY +E VGPV A +++ E LE + H K K ++ T+P ++ + +I P V D W P+ E+ + ++ G+ + +V ++ V+ K SQ R++ +F+ Sbjct: 101 LARRQKAKD-EAAEKQKTAIETGDMQEALKQEQRNL------------HITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATVTEDMDALTFATPFLLRNLNSKKEPITEINYEKMLQELKLSHNEFVDLCILCGCDYLGRIEGVGPVNAFKLITEHK--SLEKVLE------------HMEEVNKQSTKKQKYTVPSSYDYVSARDLFINPEVTDPETIQLEWKKPDVEELKKFLVEEKGFSEQRVTSQMEKVLNAKEHKGSQTRLNDFFK 355
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|317374923|sp|A7UW97.2|FEN1_NEUCR (RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNA repair protein 8; AltName: Full=Flap structure-specific endonuclease 1) HSP 1 Score: 93.2041 bits (230), Expect = 9.528e-19 Identity = 68/246 (27.64%), Postives = 115/246 (46.75%), Query Frame = 0 Query: 776 KQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKN--FFNQDKH-CEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPGTKLKEKLRRLTLPPTFPNENVVQAYIQPSV---DNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQ 1015 K R ++ + A+CQ LL++ G+P+IVAP+EAEAQCA L G ++D D F + ++ F Q K + +V + LG+ R++ I + +L G DY + VGP TA++++ E LE + +W K + P G R +P +P E+ + +P V D+ L F W P+ + + + G+ + +V + K Q RI+G+F+ Sbjct: 125 KFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLCFNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPIPKVGPSTALKLIREH--GTLEKV---VEWMKAD------PKG--------RYQIPEDWPFEDARTLFFEPDVRPADDPLCDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMKTS-QQARIEGFFK 350
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Match: gi|290457644|sp|Q17RS7.2|GEN_HUMAN (RecName: Full=Flap endonuclease GEN homolog 1) HSP 1 Score: 95.9005 bits (237), Expect = 9.672e-19 Identity = 49/153 (32.03%), Postives = 84/153 (54.90%), Query Frame = 0 Query: 791 DCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFF--NQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYT-LGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPGTKLKEKLRRLTL 940 +C +L+ G+PW+ A EAEA CA+L+ G G +T+D D +++G Q V++NF +D H + +T + + LGL R+ ++ +A+L G DY GV VG A++++ G L L F W N + ++ P + +KL ++ Sbjct: 116 ECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSL--LQRFNRW---NETSCNSSPQLLVTKKLAHCSV 263 HSP 2 Score: 77.0258 bits (188), Expect = 6.961e-13 Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQS 102 MGV LW +L+P Q +PL +L K +AVD+S+W+ +A + + G+V+ H+ LF R+ L +K VFV +G PP+LK D + +R Q + +S +S Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEA-QTVKKMMGSVMK-PHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKS 100
BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Match: gi|1339059839|ref|XP_023718485.1| (DNA repair protein complementing XP-G cells homolog isoform X2 [Cryptotermes secundus]) HSP 1 Score: 294.278 bits (752), Expect = 1.208e-79 Identity = 140/274 (51.09%), Postives = 180/274 (65.69%), Query Frame = 0 Query: 750 LLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAG-----LEPLFAFADWWKKNHENFHAPPG---TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQ 1015 +L EELQ++Q L L+ E+GKQER+A SI+DQMY + Q+LLQ+FG+P+IVAP EAEAQCAFLD LT GTITDDSDIW+FGG V+KNFFNQ KH F A+++ Q L R+++IL+ALL GSDYT G++ VGPVTA+E+LA FP G L L F DWW P G T LK KL+ + L FP+ V AY+ P VD S E F+W +P+ + D+ + KFGW K K DEI+ PV+KK + SQ +D YF+ Sbjct: 668 MLFSEELQKLQMSLEVKHEDLLVEKGKQERLAVSITDQMYVEAQELLQLFGIPYIVAPMEAEAQCAFLDSVSLTDGTITDDSDIWLFGGNKVYKNFFNQKKHVMCFKASDIKQCFKLERQQLILLALLVGSDYTPGIQGVGPVTALEILAAFPAGGTDDNILRGLRRFQDWWSAG-----MPVGSGKTSLKNKLKDIQLVEGFPSVMVADAYLHPKVDESEETFTWGLPDLTSLRDFTRQKFGWTKTKTDEILLPVMKKLEERKSQMSLDSYFR 936 HSP 2 Score: 85.1149 bits (209), Expect = 6.686e-13 Identity = 41/119 (34.45%), Postives = 73/119 (61.34%), Query Frame = 0 Query: 157 LFELPAMVQTEEDAWSSSDSEKEDIMAKLDIHNH---TDIHQIDVNSPKFQALPKHRQVEVLMELREKRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQTAMAI 272 +FELP + ++ S S + ++ H + D+H +DV+S F++LP + + ++L EL+E RKQ+SW ++HEMPKE+ FS +QM RL+KR +Q L + +E+ ++++ Sbjct: 1 MFELPPEERKLDEGLSGSQEDSLSSEEEVCFHKNWATADLHTVDVSSVHFKSLPANVRHDILSELKETRKQSSWGRLHEMPKESGEFSNYQMTRLLKRRSIQTSLEDAEKEMGGRSLSL 119
BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Match: gi|751208079|ref|XP_011156631.1| (PREDICTED: DNA repair protein complementing XP-G cells, partial [Solenopsis invicta]) HSP 1 Score: 291.582 bits (745), Expect = 1.410e-79 Identity = 173/418 (41.39%), Postives = 247/418 (59.09%), Query Frame = 0 Query: 751 LTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAG---LEPLFAFADWWKKNHENFHAPPG-TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRERVALPDKGHYQNSKRMKSAI-----DKVLGKKSVAG-PKSKAKSGSPQVEPKVGTKKAEPKAGGSKPESH-QVDPKYL-EKAQKALAHKSNKPPLFRKALEDAKKEEAKLKAIQVFAAAKQGKKKAEK-KAPKRVVLKTHALSDDES 1155 + +E+L +++ QL +Q +L + GK ER A +ISDQ+ D Q+LL++FG+P+IVAP EAEAQCA+L+ LT+GTITDDSDIW+FGGQ V+KNFFNQ+K F + ++ H LSR ++I +ALL GSDYT GV VGPVTA+E+LA FP G L L F W KK A PG T L+ KLR + L FPN+ VVQAY+ P+VD S E F+W PN V +CDYA+ KFGW K K D+ + P++++ +Q +D YF+ + A P SKR++ A+ D + +V P+ K S V+ K + + S ES + + EK+ KA+ + K + ++ + A E KL AI++F +KQG K +K K R + + LS+ +S Sbjct: 514 INEEDLMELKGQLEDEQEELAKDIGKLERQATNISDQIRTDAQELLRLFGIPYIVAPMEAEAQCAYLEQIKLTNGTITDDSDIWLFGGQCVYKNFFNQNKKVLQFRSCDIQHHFKLSRNQLIQLALLVGSDYTTGVTGVGPVTALEILAAFPADGDNVLYGLHNFCSWIKK---GMVATPGKTGLRNKLRSMKLNRDFPNQAVVQAYLFPTVDESKETFTWGKPNVVLLCDYARQKFGWTKGKFDDTMIPILRRMEENKNQKLLDMYFKAK--ASPRSIEPNLSKRVQKALRRLNNDDMDTDSNVDDEPRIKKSKKSSNVQKSSDGKNSIIELETSVQESIPSIKTSTIPEKSIKAVKKEYTKEYIPQREKDKACALERKLHAIEIFRKSKQGLDKTKKVKCKVRKIKEQAELSESDS 926
BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Match: gi|704301477|ref|XP_010163018.1| (PREDICTED: DNA repair protein complementing XP-G cells, partial [Antrostomus carolinensis]) HSP 1 Score: 291.967 bits (746), Expect = 1.561e-79 Identity = 147/347 (42.36%), Postives = 230/347 (66.28%), Query Frame = 0 Query: 732 DESIARKMELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPG---TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYF---QRERVALPDKGHYQNSKRMKSAIDKVLGKKSVAGPKSKAKSGSPQVEPKVGTKKAEPK 1072 ++++ R+ + +D EN ++ EEL+++++ L+ +QN L A++ +QER+AAS++ QM+ + Q+LL++FG+P+I AP EAEAQCA LD+ TSGTITDDSD+W+FG ++V+KNFF+Q+K+ E++ + LGL R ++I +A L GSDYT G+ +VG VTAME+L EFPG GLEPL FA+WW + +N P TK+K+KLR L L FPN V +AY++P VD + +F+W P+ +I ++ Q+ FGW + K+DEI+ PVIK+ +++ +Q RID +F Q E++A+ S+R++ A VA K K K + +++ G + E K Sbjct: 491 NQNVEREDDGKDAENEWQDISLEELEELEKDLSAEQNVLQAQKQQQERIAASVTGQMFFESQELLRLFGIPYIEAPMEAEAQCALLDLTDQTSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQCVDFQNQLGLDRNKLINLAYLLGSDYTEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKLRPNPHDTKVKKKLRELQLSAGFPNPAVAEAYLKPVVDETRGSFTWGKPDVEQIREFCQNHFGWSRTKIDEILLPVIKQLNLQQTQLRIDSFFRLAQHEKLAIK-------SQRLRRA---------VASLKRKEKEAADEIQEAAGVMERECK 821
BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Match: gi|699624072|ref|XP_009878820.1| (PREDICTED: DNA repair protein complementing XP-G cells [Charadrius vociferus]) HSP 1 Score: 293.508 bits (750), Expect = 4.028e-79 Identity = 138/309 (44.66%), Postives = 214/309 (69.26%), Query Frame = 0 Query: 732 DESIARKMELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPG---TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYFQRERVALPDKGHYQNSKRMKSAI 1037 D+++ R + +D + ++ EEL+ ++ L+ +QN L A++ +QER+AAS++ QM+ + Q+LL++FG+P+I AP EAEAQCA LD+ TSGTITDDSD+W+FG ++V+KNFF+Q+K+ E++ + LGL R ++I +A L GSDYT G+ +VG VTAME+L EFPG GLEPL FA+WW + +N P TK+K+KLR L L FPN V +AY++P VD + +F+W P+ +I ++ QD FGW + K+DEI+ PV+K+ +++ +Q RID +F R+A +K + S+R++ A+ Sbjct: 669 DQNVERDDDGKDAADEWQDISLEELEGLENDLSAEQNMLQAQKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYVDFQNQLGLDRNKLINLAYLLGSDYTEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKLRPNPHDTKVKKKLRELQLSSGFPNPAVAEAYLKPVVDETRGSFTWGKPDVEQIREFCQDHFGWTRTKIDEILSPVMKQLNLQQTQLRIDSFF---RLAQHEKQAIK-SQRLRRAV 973 HSP 2 Score: 188.348 bits (477), Expect = 7.884e-45 Identity = 110/273 (40.29%), Postives = 164/273 (60.07%), Query Frame = 0 Query: 1 MGVTGLWTVLDPAGQPVPLESLAHKVLAVDVSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKERDLFELPAMVQTEEDAWSSSDSEKEDI-MAK---LDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELRE--KRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQ 267 MGV GLW +L+ AG+P+ E+L K+LAVD+SIWLNQA+KG RD GN + +AH+L LFHR+CKLLF+RI+PVFVFDG P LKR TL +RRQRK A S + KL+ FL+ QV+ L +S E L S+ R D++ LP++ E+++ D ++ ++ M++ L + H +D+ S F LP + E+L +++E KRK+ + MP+E+ +FS +Q+ L+K+S L R + V +EL+Q Sbjct: 1 MGVQGLWKLLECAGRPINPETLEGKILAVDISIWLNQAIKGARDHRGNSIQNAHLLTLFHRLCKLLFFRIRPVFVFDGEAPLLKRQTLAKRRQRKEVAISDSRKTTEKLLRTFLKRQVIKTALSGKS----------NEALPSITQVRREEID--DMYVLPSLEDEEKNSSEEEDEKEWEVRMSQKKMLQEELCENPHSVDIESEDFNKLPPEIKHEILTDMKEFTKRKRTLF---EAMPEESNDFSQYQLRGLLKKSNLNRCIENVEKELNQ 258
BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Match: gi|700383663|ref|XP_009931789.1| (PREDICTED: DNA repair protein complementing XP-G cells-like [Opisthocomus hoazin]) HSP 1 Score: 293.893 bits (751), Expect = 4.084e-79 Identity = 139/312 (44.55%), Postives = 213/312 (68.27%), Query Frame = 0 Query: 732 DESIARKMELQDQENPENLLTKEELQQIQEQLAQDQNQLIAERGKQERMAASISDQMYADCQDLLQMFGLPWIVAPSEAEAQCAFLDMNGLTSGTITDDSDIWVFGGQNVFKNFFNQDKHCEHFTANEVAQHLGLSRERMILIALLTGSDYTLGVESVGPVTAMEVLAEFPGAGLEPLFAFADWWKKNHENFHAPPG---TKLKEKLRRLTLPPTFPNENVVQAYIQPSVDNSLEAFSWAVPNFVEICDYAQDKFGWPKHKVDEIIKPVIKKFHVKISQGRIDGYF---QRERVALPDKGHYQNSKRMKSAI 1037 D+ + R+ + +D + ++ EEL+ ++ L+ +QN L A + +QER+AAS++ QM+ + Q+LL++FG+P+I AP EAEAQCA LD+ TSGTITDDSD+W+FG ++V+KNFF+Q+K+ E++ + LGL R ++I +A L GSDYT G+ +VG VTAME+L EFPG GLEPL FA+WW + +N P TK+K+KLR L L FPN V +AY++P VD + +F+W P+ +I ++ QD FGW + K+DEI+ PVIK+ +++ +Q RID +F Q E++A+ S+R++ A+ Sbjct: 703 DQGVEREDDGKDAADEWQDISLEELEGLENDLSAEQNMLQARKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYIDFQNQLGLDRSKLINLAYLLGSDYTEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKLRPNPQDTKVKKKLRELQLASGFPNPAVAEAYLKPVVDETRGSFTWGKPDVEQIREFCQDHFGWTRTKIDEILLPVIKQLNLQQTQLRIDSFFRLAQHEKLAI-------KSQRLRRAV 1007 HSP 2 Score: 150.214 bits (378), Expect = 5.872e-33 Identity = 90/243 (37.04%), Postives = 141/243 (58.02%), Query Frame = 0 Query: 31 VSIWLNQAVKGFRDKSGNVLPHAHVLGLFHRVCKLLFYRIKPVFVFDGPPPQLKRDTLFRRRQRKSRASRQSDASRAKLIDNFLRSQVVAQQLQRQSQVVDRVAERGQEELASLLSQRSHPKKERDLFELPAMVQTEEDAWSSSDSEKEDI-MAK---LDIHNHTDIHQIDVNSPKFQALPKHRQVEVLMELRE--KRKQNSWAKMHEMPKEAQNFSGFQMDRLMKRSKLQRKLHEVGQELSQ 267 + IWLNQA+KG RD+ GN + +AH+L LFHR+CKLLF+RI+PVFVFDG P LKR TL +RR RK A+ S + KL+ FL+ QV+ L + Q E L S+ R D++ LP++ E+++ D ++ ++ M++ L + H +D+ S F LP + E+L +++E KRK+ + MP+E+ +FS +Q+ L+K+S L R + V +E++Q Sbjct: 58 ICIWLNQAIKGARDRGGNSIQNAHLLTLFHRLCKLLFFRIRPVFVFDGEAPLLKRQTLAKRRHRKEVAASDSRRTTEKLLKTFLKRQVIKTALTGKRQ--------SNEALPSITQVRREEID--DMYVLPSLQDEEKNSSEEEDEKEWEVRMSQKKMLQEELCENPHSVDIESEDFNKLPPEIKHEILTDMKEFTKRKRTLF---EAMPEESDDFSQYQLRGLLKKSNLNRCIENVQKEMNQ 287 The following BLAST results are available for this feature:
BLAST of dna repair protein complementing xp-g cells-like protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of dna repair protein complementing xp-g cells-like protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna repair protein complementing xp-g cells-like protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold382_size189932:57370..71689- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold382_size189932-snap-gene-0.25 ID=maker-scaffold382_size189932-snap-gene-0.25|Name=dna repair protein complementing xp-g cells-like protein|organism=Tigriopus kingsejongensis|type=gene|length=14320bp|location=Sequence derived from alignment at scaffold382_size189932:57370..71689- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna repair protein complementing xp-g cells-like protein' has the following synonyms
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