chromobox protein homolog 1, maker-scaffold382_size189932-snap-gene-0.29 (gene) Tigriopus kingsejongensis

Overview
Namechromobox protein homolog 1
Unique Namemaker-scaffold382_size189932-snap-gene-0.29
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Match: EMLSAG00000002376 (supercontig:LSalAtl2s:LSalAtl2s1452:27623:28132:1 gene:EMLSAG00000002376 transcript:EMLSAT00000002376 description:"augustus_masked-LSalAtl2s1452-processed-gene-0.8")

HSP 1 Score: 152.91 bits (385), Expect = 4.964e-49
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0 
Query:   35 PPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            P   HPEEDSR RGFDRGLQAERIIGATD+SGELMFL+KWKGSDEADLVPARQAN+KC  VVIQFYEERLSWH+SSQDE+E
Sbjct:   89 PNAVHPEEDSRPRGFDRGLQAERIIGATDTSGELMFLIKWKGSDEADLVPARQANVKCSNVVIQFYEERLSWHSSSQDEDE 169
[Close]
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Match: EMLSAG00000007020 (supercontig:LSalAtl2s:LSalAtl2s399:436338:443827:-1 gene:EMLSAG00000007020 transcript:EMLSAT00000007020 description:"augustus_masked-LSalAtl2s399-processed-gene-4.2")

HSP 1 Score: 94.7449 bits (234), Expect = 1.528e-26
Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:    6 VPAFEDSLKA---KKDVAKKRKSDTASPATTVPP----------KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVI 97
             P FE   KA   KKD      +   SP     P            +PE+DS  RGFDR LQAER+IGAT +SGEL+ ++KWKGSDE D VPAR AN+KCP +VI
Sbjct:   34 CPKFEKKFKANIEKKDA--NGSTSIGSPNYNASPASKKEAKKLKALNPEKDSEPRGFDRILQAERLIGATGTSGELILIIKWKGSDEMDPVPARXANLKCPNLVI 136
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|1170338|sp|P45973.1|CBX5_HUMAN (RecName: Full=Chromobox protein homolog 5; AltName: Full=Antigen p25; AltName: Full=Heterochromatin protein 1 homolog alpha; Short=HP1 alpha)

HSP 1 Score: 117.857 bits (294), Expect = 1.980e-33
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 0 
Query:   17 KDVAKKRKSDTASPATTVPPKRHPEEDSR-SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            K  + KRKS+ ++ A  +  K+  E+ +  +RGF+RGL+ E+IIGATDS G+LMFL+KWK +DEADLV A++AN+KCPQ+VI FYEERL+WH   +D E
Sbjct:   84 KSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAE 182
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|73619718|sp|Q5R6X7.1|CBX3_PONAB (RecName: Full=Chromobox protein homolog 3; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma >gi|116241284|sp|Q13185.4|CBX3_HUMAN RecName: Full=Chromobox protein homolog 3; AltName: Full=HECH; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=Modifier 2 protein)

HSP 1 Score: 116.701 bits (291), Expect = 3.606e-33
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   45 RSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDE 113
            + RGF RGL  ERIIGATDSSGELMFL+KWK SDEADLV A++ANMKCPQ+VI FYEERL+WH+  +DE
Sbjct:  113 KPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|21903394|sp|P23198.2|CBX3_MOUSE (RecName: Full=Chromobox protein homolog 3; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=M32; AltName: Full=Modifier 2 protein)

HSP 1 Score: 116.701 bits (291), Expect = 3.933e-33
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   45 RSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDE 113
            + RGF RGL  ERIIGATDSSGELMFL+KWK SDEADLV A++ANMKCPQ+VI FYEERL+WH+  +DE
Sbjct:  113 KPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|2493705|sp|Q61686.1|CBX5_MOUSE (RecName: Full=Chromobox protein homolog 5; AltName: Full=Heterochromatin protein 1 homolog alpha; Short=HP1 alpha)

HSP 1 Score: 116.701 bits (291), Expect = 5.614e-33
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   17 KDVAKKRKSDTASPATTVPPKRHPEEDSR-SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            K    KRKS  ++ A  +  K+  E+ +  +RGF+RGL+ E+IIGATDS G+LMFL+KWK +DEADLV A++AN+KCPQ+VI FYEERL+WH   +D E
Sbjct:   84 KSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAE 182
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|48428808|sp|P83916.1|CBX1_HUMAN (RecName: Full=Chromobox protein homolog 1; AltName: Full=HP1Hsbeta; AltName: Full=Heterochromatin protein 1 homolog beta; Short=HP1 beta; AltName: Full=Heterochromatin protein p25; AltName: Full=M31; AltName: Full=Modifier 1 protein; AltName: Full=p25beta >gi|48428809|sp|P83917.1|CBX1_MOUSE RecName: Full=Chromobox protein homolog 1; AltName: Full=Heterochromatin protein 1 homolog beta; Short=HP1 beta; AltName: Full=Heterochromatin protein p25; AltName: Full=M31; AltName: Full=Modifier 1 protein)

HSP 1 Score: 116.316 bits (290), Expect = 6.272e-33
Identity = 51/62 (82.26%), Postives = 58/62 (93.55%), Query Frame = 0 
Query:   47 RGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHT 108
            RGF RGL+ ERIIGATDSSGELMFL+KWK SDEADLVPA++AN+KCPQVVI FYEERL+WH+
Sbjct:  111 RGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 172
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|123479|sp|P29227.1|HP1_DROVI (RecName: Full=Heterochromatin protein 1; Short=HP1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.582e-25
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0 
Query:   12 SLKAKKDVAKKRKSDTASPATTVPPKRHPEEDSR------SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQD 112
            S  A      KRKS+  +       KR   ED+         GFDRGL+AE+I+GA+D++G L FL+++KG D+A++VP+  AN+K PQ+VI+FYEERLSW++ ++D
Sbjct:  107 STTASNSSGSKRKSEEPAGPAGSKSKRVESEDTGDIVPAGGTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSTVANVKIPQMVIRFYEERLSWYSDNED 213
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|1170337|sp|P05205.2|HP1_DROME (RecName: Full=Heterochromatin protein 1; Short=HP1; AltName: Full=Non-histone chromosomal protein C1A9 antigen)

HSP 1 Score: 94.3597 bits (233), Expect = 3.586e-24
Identity = 39/69 (56.52%), Postives = 58/69 (84.06%), Query Frame = 0 
Query:   44 SRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQD 112
            S S GFDRGL+AE+I+GA+D++G L FL+++KG D+A++VP+  AN K P++VI FYEERLSW++ ++D
Sbjct:  138 SGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYSDNED 206
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1339092686|ref|XP_023707556.1| (chromobox protein homolog 1-like isoform X2 [Cryptotermes secundus])

HSP 1 Score: 143.28 bits (360), Expect = 7.674e-41
Identity = 63/79 (79.75%), Postives = 74/79 (93.67%), Query Frame = 0 
Query:   37 KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            K+H EED++ RGFDRGL+ E+IIGATDSSGELMFL+KWKG+DEADLVPARQAN +CPQ+VIQFYEERL+WHTSS DE+E
Sbjct:  111 KKHVEEDNKPRGFDRGLEPEKIIGATDSSGELMFLMKWKGTDEADLVPARQANGRCPQIVIQFYEERLTWHTSSHDEDE 189
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|926617054|ref|XP_013773675.1| (chromobox protein homolog 1-like isoform X2 [Limulus polyphemus] >gi|926617056|ref|XP_013773676.1| chromobox protein homolog 1-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 142.51 bits (358), Expect = 1.236e-40
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:    6 VPAFEDSLKAK----KDVAKKRK-SDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            +  FE S K+K     D  KKRK S+  S  +T   K+ PE D++ +GFDRGL+ ++IIGATDSSGELMFL+KWKGSDEADLV A+QAN+KCPQVVI+FYEERL+WHT +  EE
Sbjct:   74 IAEFEKSYKSKDGEKNDEKKKRKISEDGSNNSTQKKKKKPENDNKLKGFDRGLEPDKIIGATDSSGELMFLIKWKGSDEADLVAAKQANVKCPQVVIKFYEERLTWHTGTSQEE 187
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1238844422|ref|XP_022240663.1| (chromobox protein homolog 1-like isoform X1 [Limulus polyphemus] >gi|1238844424|ref|XP_022240664.1| chromobox protein homolog 1-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 142.51 bits (358), Expect = 1.480e-40
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:    6 VPAFEDSLKAK----KDVAKKRK-SDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            +  FE S K+K     D  KKRK S+  S  +T   K+ PE D++ +GFDRGL+ ++IIGATDSSGELMFL+KWKGSDEADLV A+QAN+KCPQVVI+FYEERL+WHT +  EE
Sbjct:   78 IAEFEKSYKSKDGEKNDEKKKRKISEDGSNNSTQKKKKKPENDNKLKGFDRGLEPDKIIGATDSSGELMFLIKWKGSDEADLVAAKQANVKCPQVVIKFYEERLTWHTGTSQEE 191
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|907677476|ref|XP_013105574.1| (PREDICTED: chromobox protein homolog 1-like [Stomoxys calcitrans])

HSP 1 Score: 141.739 bits (356), Expect = 1.508e-40
Identity = 71/112 (63.39%), Postives = 90/112 (80.36%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKRHPEEDSRSR---GFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            + A+E+S+K KK  AKKR S +A+ + T   ++  EED  +R   GFDRGL+  +I+GATDSSGELMFL+KWKGSDEADLVPA+QAN++CPQVVIQFYEERL+WHT S DE+
Sbjct:   58 IAAYEESIKPKKPEAKKRTS-SATGSETKTKRKIAEEDKDNRKTVGFDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVRCPQVVIQFYEERLTWHTPSADED 168
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|751799072|ref|XP_011209481.1| (PREDICTED: chromobox protein homolog 1 [Bactrocera dorsalis] >gi|1098623177|ref|XP_018804238.1| PREDICTED: chromobox protein homolog 1 [Bactrocera latifrons] >gi|1098623182|ref|XP_018804239.1| PREDICTED: chromobox protein homolog 1 [Bactrocera latifrons])

HSP 1 Score: 141.354 bits (355), Expect = 1.545e-40
Identity = 70/111 (63.06%), Postives = 90/111 (81.08%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKRHPEE--DSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            + AFE+SLK KK+ +KKR S+T    + V  K   EE  + R+ GFDRGL+  +I+GATDSSGELMFL+KWKGSDEADLVPA+QAN+KCPQ+VIQFYEERL+WHT++ +E+
Sbjct:   50 IAAFEESLKTKKE-SKKRSSNTPVNDSKVKRKAVEEERENRRTMGFDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVKCPQIVIQFYEERLTWHTANAEED 159
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1067080402|ref|XP_018023939.1| (PREDICTED: chromobox protein homolog 1-like [Hyalella azteca])

HSP 1 Score: 141.739 bits (356), Expect = 1.772e-40
Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 0 
Query:   22 KRKSDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            K++S     +    PK+  E+D+R RGFDRGL+AERIIGATDSSGELMFL+KW+G+DEADLVPARQAN +CPQVVI+FYEERL+WH+S+ DEEE
Sbjct:   89 KKRSAADEGSAKKKPKKGVEDDNRPRGFDRGLEAERIIGATDSSGELMFLMKWRGTDEADLVPARQANTRCPQVVIKFYEERLTWHSSNADEEE 182
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1339092682|ref|XP_023707554.1| (chromobox protein homolog 1-like isoform X1 [Cryptotermes secundus] >gi|1339092684|ref|XP_023707555.1| chromobox protein homolog 1-like isoform X1 [Cryptotermes secundus] >gi|1330914840|gb|PNF33652.1| Chromobox protein-like protein 5 [Cryptotermes secundus] >gi|1330914841|gb|PNF33653.1| Chromobox protein-like protein 5 [Cryptotermes secundus])

HSP 1 Score: 142.895 bits (359), Expect = 2.240e-40
Identity = 66/90 (73.33%), Postives = 78/90 (86.67%), Query Frame = 0 
Query:   26 DTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            D   PA +   K+H EED++ RGFDRGL+ E+IIGATDSSGELMFL+KWKG+DEADLVPARQAN +CPQ+VIQFYEERL+WHTSS DE+E
Sbjct:  128 DDKKPAAS--KKKHVEEDNKPRGFDRGLEPEKIIGATDSSGELMFLMKWKGTDEADLVPARQANGRCPQIVIQFYEERLTWHTSSHDEDE 215
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|242011615|ref|XP_002426543.1| (hypothetical protein Phum_PHUM259320 [Pediculus humanus corporis] >gi|212510680|gb|EEB13805.1| hypothetical protein Phum_PHUM259320 [Pediculus humanus corporis])

HSP 1 Score: 150.214 bits (378), Expect = 2.580e-40
Identity = 69/109 (63.30%), Postives = 86/109 (78.90%), Query Frame = 0 
Query:   11 DSLKAKKDVAKK---RKSDTASPATTVPPKR-HPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            + ++ KK++ KK   ++  T      VP KR H EED + RGFDRG++ E+IIGATDSSGELMFL+KWKG DEADLVPARQAN+KCPQ+VI FYEERL+WHTS+ DEE+
Sbjct:  454 EEIRKKKEIVKKNDHKRKSTHEDKKNVPTKRKHSEEDGKPRGFDRGIEPEKIIGATDSSGELMFLMKWKGIDEADLVPARQANVKCPQIVIAFYEERLTWHTSAHDEED 562
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|498987637|ref|XP_004531153.1| (chromobox protein homolog 1 [Ceratitis capitata])

HSP 1 Score: 140.584 bits (353), Expect = 3.247e-40
Identity = 70/113 (61.95%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKR----HPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            + AFE+SLK KK+  KKR S T  P      KR       E+ R+ GFDRGL+  +I+GATDSSGELMFL+KWKGSDEADLVPA+QAN+KCPQ+VIQFYEERL+WHT++ +E+
Sbjct:   50 ISAFEESLKTKKE-GKKRTSST--PVNDTKAKRKAVEEERENRRTMGFDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVKCPQIVIQFYEERLTWHTANAEED 159
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1048039099|ref|XP_017476395.1| (PREDICTED: chromobox protein homolog 1 [Rhagoletis zephyria] >gi|1048039101|ref|XP_017476396.1| PREDICTED: chromobox protein homolog 1 [Rhagoletis zephyria] >gi|1048039103|ref|XP_017476397.1| PREDICTED: chromobox protein homolog 1 [Rhagoletis zephyria])

HSP 1 Score: 140.198 bits (352), Expect = 4.758e-40
Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKRHPEE--DSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            + AFE+SLK KK+  KKR + T    T V  K   EE  + R+ GFDRGL+  +I+GATDSSGELMFL+KWKGSDEADLVPA+QAN+KCPQ+VIQFYEERL+WHT++ +E+
Sbjct:   50 IAAFEESLKTKKE-GKKRAATTPVNDTKVKRKTIEEERDNRRTMGFDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVKCPQIVIQFYEERLTWHTANAEED 159
The following BLAST results are available for this feature:
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000023764.964e-4986.42supercontig:LSalAtl2s:LSalAtl2s1452:27623:28132:1 ... [more]
EMLSAG000000070201.528e-2649.52supercontig:LSalAtl2s:LSalAtl2s399:436338:443827:-... [more]
back to top
BLAST of chromobox protein homolog 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|1170338|sp|P45973.1|CBX5_HUMAN1.980e-3355.56RecName: Full=Chromobox protein homolog 5; AltName... [more]
gi|73619718|sp|Q5R6X7.1|CBX3_PONAB3.606e-3375.36RecName: Full=Chromobox protein homolog 3; AltName... [more]
gi|21903394|sp|P23198.2|CBX3_MOUSE3.933e-3375.36RecName: Full=Chromobox protein homolog 3; AltName... [more]
gi|2493705|sp|Q61686.1|CBX5_MOUSE5.614e-3355.56RecName: Full=Chromobox protein homolog 5; AltName... [more]
gi|48428808|sp|P83916.1|CBX1_HUMAN6.272e-3382.26RecName: Full=Chromobox protein homolog 1; AltName... [more]
gi|123479|sp|P29227.1|HP1_DROVI1.582e-2544.86RecName: Full=Heterochromatin protein 1; Short=HP1[more]
gi|1170337|sp|P05205.2|HP1_DROME3.586e-2456.52RecName: Full=Heterochromatin protein 1; Short=HP1... [more]
back to top
BLAST of chromobox protein homolog 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1339092686|ref|XP_023707556.1|7.674e-4179.75chromobox protein homolog 1-like isoform X2 [Crypt... [more]
gi|926617054|ref|XP_013773675.1|1.236e-4061.40chromobox protein homolog 1-like isoform X2 [Limul... [more]
gi|1238844422|ref|XP_022240663.1|1.480e-4061.40chromobox protein homolog 1-like isoform X1 [Limul... [more]
gi|907677476|ref|XP_013105574.1|1.508e-4063.39PREDICTED: chromobox protein homolog 1-like [Stomo... [more]
gi|751799072|ref|XP_011209481.1|1.545e-4063.06PREDICTED: chromobox protein homolog 1 [Bactrocera... [more]
gi|1067080402|ref|XP_018023939.1|1.772e-4069.15PREDICTED: chromobox protein homolog 1-like [Hyale... [more]
gi|1339092682|ref|XP_023707554.1|2.240e-4073.33chromobox protein homolog 1-like isoform X1 [Crypt... [more]
gi|242011615|ref|XP_002426543.1|2.580e-4063.30hypothetical protein Phum_PHUM259320 [Pediculus hu... [more]
gi|498987637|ref|XP_004531153.1|3.247e-4061.95chromobox protein homolog 1 [Ceratitis capitata][more]
gi|1048039099|ref|XP_017476395.1|4.758e-4063.06PREDICTED: chromobox protein homolog 1 [Rhagoletis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold382_size189932supercontigscaffold382_size189932:178844..181605 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:nucleus
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold382_size189932-snap-gene-0.29-mRNA-1maker-scaffold382_size189932-snap-gene-0.29-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold382_size189932:178844..181605-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold382_size189932-snap-gene-0.29 ID=maker-scaffold382_size189932-snap-gene-0.29|Name=chromobox protein homolog 1|organism=Tigriopus kingsejongensis|type=gene|length=2762bp|location=Sequence derived from alignment at scaffold382_size189932:178844..181605- (Tigriopus kingsejongensis)
ATGGCCCGCATCTGGGTCCCTGTACAATGGGGGGGGTCGAACCCTAATAA
AATGTAAGCCCATTAGGGACCCCCCCCGCATCCGTTCTTTGGCCCTAAAA
AAATGGCCGGCCGGCGAATTAGCGGCCCAACGCTCGGGCCCCATGGCAAG
CCTGCCAATCTGAGCCGACCGCTCAATTTCGTGACTCTAAAGAATAACTG
AAGAGGCCAAGTAGCCAAACTCAATTTTCATTCCCCCAAAGTTCCCCCTA
GCCCTCAATTGTGGCGGTACCTGCCCCCGCCCGTGGCAAAATGTCGGAAG
CCGAGGAGTATGTGGTGGACCAGATCCTGGACAAGCGCATCCGCAACGGC
AAACCCGAGTACTTCCTCTCGTGGAAAGGTTACGGCCCGGATGAGAACAC
TTGGGAGCCCAAAGAGAACCTCGACTGTCCCGAGCTCATCAAGGTGAACA
CCACGACTCACCTCCGTAGCCCTACTCGCCGCCTGGACCGATAGGAACAC
CCTCGCCCGGCTGAAATAGACGCGTTCGGACGGTCGTCCTGGGACGGGGG
TTCGAATCCAGCTCTGGGCGAGTCAGCGACGCAGCCAATCCTCGAGGCAA
TGACGTTAAGCCGAGATCAGACAGTTGGAGCTGAATCGGCTGAGGGCCTG
ATCGAAGTTTTCGCCGTTGTTCATGTCTGGCTCACCGTGTTCTTTGTCTC
AGTTTCACAGCTCACTATTGCCCAAAACCCGGGAAAGACCTTGTCATCGA
AATCATAGGCGACTAGAGCTTGCACGTTACTGGGCCGGTTGAGCCGGTGC
ACGAGGTTTAAAAGCTTAAAGGTTTAAAAAAAGGGCTCCAGCAAGGAGGT
TCTTTATCTGGTGTGAGCGTACCTGGGAAAGTGCAAGTGGTTGAAAGGGC
GAAGCGACAACCGAGGCTGCTGATCTAAATGTAAACAAACTTTTCCCGGC
TGAAAGGGCGAAGCGACAACCGAGGCTGCTGATCTAAATGTAAACAAACT
TTTCCCGGCTGAAAGGGCGAAGCGACAACCGAGGTTGCTGATCTAAATGT
AAACACACTTTTCCCAGCTGAAAGGGCGAAGCGACAACCGAGGCTGCTGA
TCTAAATGTAAACAAACTTTTCCCGGTCTTTTGATGGCGCGCCCGAGAAA
TGCCAAGATGCATTGTTTTTGCATTTAGATCAGCAGCCGTGTTGTCGGTC
CTTTGGTGGACGAGTGGCTGGCTCTAGTTAGAATACCTCAATAAGCTCAA
GCCGAAATGTTGATGAGAGAGTTCAGCTAGTGGCTCAACTTGAGCCCAGA
TGGGTCGGAATGAATAATAACCCGCCTGAGCTGAAACAAGATATTTCAAC
CAAATTCGCACTTCGGTCGGCTTAACCGCCTTGAAATGGGTGGTCCAATC
CCTATTTGGTCGAGTGAGGCACCTAGCAAGTTCAATTTGAAAATGTAACG
GCCAAAGTCGCGTCTAGGTTAGCGTTTCAAAGTCGGCAAAGGTTTCAAAT
GTGGCCCCATGTGTAATAATCAATTGTGTTCTGCCCAACCGCCTAATTTG
CATTCGACTAGTCGGTTTGGGCTCGCAATCGACTCTTGTTTTGGGAGTCG
TCGCCTCGAAACTTTTGACTCTTCCCTAACCCCTCCTAACTTTGTATTTT
AACAGTCTTCAGTTGGTTTGTGGCAGTTTGAGTTGAGTGACCAGTGTGCG
ATTGCTTTGCCAATGTGTAAGCATTGAAATTAGGCATTTTGCAACGTCAG
CGAGCAAATCTTTGCGAGTGTAGAGTTGTGGAACGTCAAAAAACAACTCC
GGCGGGGCAATGAAGTTCCTTTAGGGATATGATAGCGTAGAAAGCTGAAT
CATGCAACTAAATTTGCAAAACAAATCGTGGTACATTTTTGGCATCATCA
GCCAGCAATTCTGGGCGAGTGCAAAGTTGCAAAACGTTAAAAATAACTCC
GGCAGGGCAAGTAGTTGACTTCAATGATATGATCTGGGAGAAAACTGACT
CTTTCAACTTTGTTTTACGAAACGAATCGTGGGATATTTCTTTATTTACT
CAGGATGACGAGTGCGTTGAATCACGCTGATATTCGTCAACCCATTCAGG
GAACTTTGCAATTTTGAGAAGTTCTCGACTCTTGTCTAGTTTCGTAGCTT
TTTTTTAAAACTGGGACGATCATCGCCCTAATGGTTCTCCCCAGAGTATT
TCCAAAACCCTCCTACCCCAGTGGGAGAATGGAATGGCAGTCTTGCATCT
CATTTCAGGCATTCGAGGACAGTCTGAAGGCCAAAAAGGATGTGGCCAAG
AAGCGCAAGAGCGACACCGCATCGCCGGCAACCACCGTTCCACCTAAACG
CCATCCCGAGGAGGATTCGCGCTCCCGCGGGTTCGATCGAGGCTTGCAAG
CCGAGAGGATCATTGGAGCCACAGATTCGAGTGGCGAGCTCATGTTTTTG
GTCAAATGGAAAGGATCCGACGAAGCGGATCTCGTGCCCGCCCGACAGGC
CAATATGAAATGTCCTCAAGTGGTTATCCAGTTTTATGAAGAGCGACTGT
CGTGGCACACCTCCTCGCAGGATGAAGAGGAGTAAGGTTGATCTCATTGT
TTTGTTTATTCCCTGGTGGTTGAATGTGTGTTCACCTCTTTTCCCAAGAC
AATAGCGATGAAGGATCGTCTCGGAAGGCCTCGCAATCTTTTTCGGAAGG
ATTTATTTTCCAGAACGACCTTGTTTACTGAACGGCTAGTATTACAATAA
ACCAAGTGAGAA
back to top
Synonyms
The feature 'chromobox protein homolog 1' has the following synonyms
Synonym
Tk03707
Add to Basket