probable ribosome biogenesis protein rlp24, maker-scaffold384_size188899-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview
Nameprobable ribosome biogenesis protein rlp24
Unique Namemaker-scaffold384_size188899-snap-gene-0.24
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Match: EMLSAG00000005946 (supercontig:LSalAtl2s:LSalAtl2s321:157733:158373:-1 gene:EMLSAG00000005946 transcript:EMLSAT00000005946 description:"maker-LSalAtl2s321-augustus-gene-1.31")

HSP 1 Score: 227.254 bits (578), Expect = 2.171e-76
Identity = 128/204 (62.75%), Postives = 158/204 (77.45%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLDTSIKISAKKAQRTPKRTRAKIQEIRDTDQEMQE 214
            MR++KC+FCGSP YPG G  F+RNDCK F FCRSKCHKNFKKKKNPRKAKWTKAFRK +GKEL VDPSFEFE+RR EPVKYDR LW  TITA+KR+E IKNKRQAK+I DR+K+++ IQ  +D++EVQRD+ALIRSPAAGLKRPAK MD++D E           E+  L  +   S +K +  PK T+  ++E+ ++D EM+E
Sbjct:    1 MRVEKCYFCGSPRYPGKGILFIRNDCKEFIFCRSKCHKNFKKKKNPRKAKWTKAFRKASGKELGVDPSFEFERRRXEPVKYDRALWENTITAMKRVEEIKNKRQAKYIYDRMKRAKKIQDEKDVKEVQRDMALIRSPAAGLKRPAKEMDIDDTE-----------ENTELGLA---STEKLKIQPKLTKKILEEVVESDHEMEE 190          
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Match: EMLSAG00000003171 (supercontig:LSalAtl2s:LSalAtl2s176:340392:341735:-1 gene:EMLSAG00000003171 transcript:EMLSAT00000003171 description:"augustus_masked-LSalAtl2s176-processed-gene-3.0")

HSP 1 Score: 61.6178 bits (148), Expect = 2.284e-12
Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQD 133
            M+ID C + G  IYP  G   VR D KVFKF   + HK    K+NPRK  WT  +R+   K +  + S   +KR     ++ R +   T      ++ I  KR  K  + + ++ +AI+ A+D
Sbjct:    1 MKIDLCSYSGYKIYPCRGRTLVRPDGKVFKFLXGRSHKAHLLKRNPRKVTWTVLYRRKHKKGIEEETS---KKRTKRTQRFQRAVVGAT------LQDILAKRNQKPEVRKAQREQAIRAAKD 114          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783333|sp|Q9UHA3.1|RLP24_HUMAN (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like)

HSP 1 Score: 234.572 bits (597), Expect = 3.740e-78
Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG     K   +E++  + ++E ++ +EDAP
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|75042578|sp|Q5RF04.1|RLP24_PONAB (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like)

HSP 1 Score: 233.417 bits (594), Expect = 1.001e-77
Identity = 107/169 (63.31%), Postives = 138/169 (81.66%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKK++NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG     K   +E++  + ++E ++ +EDAP
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783266|sp|Q6P6G7.1|RLP24_RAT (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1)

HSP 1 Score: 232.646 bits (592), Expect = 1.973e-77
Identity = 108/168 (64.29%), Postives = 137/168 (81.55%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK +RQAK I++RLKK++ +QK QDIREV++++ LIR+P AG     K   +E++  + ++E ++ +EDA
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQRRQAKFIMNRLKKNKELQKVQDIREVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDA 162          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|108860942|sp|Q3SZ12.1|RLP24_BOVIN (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1)

HSP 1 Score: 231.876 bits (590), Expect = 3.409e-77
Identity = 107/168 (63.69%), Postives = 136/168 (80.95%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QD++EV++++ LIR+P AG     K   +ED+  + ++E ++ +ED 
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDVKEVKQNIHLIRAPLAG-----KGKQLEDKMVQKLQEDVD-MEDV 162          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783322|sp|Q99L28.1|RLP24_MOUSE (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like)

HSP 1 Score: 230.72 bits (587), Expect = 1.135e-76
Identity = 106/166 (63.86%), Postives = 134/166 (80.72%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLE 176
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG     K   +E++  + ++E ++  E
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVDMEE 161          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783306|sp|Q7ZTZ2.1|RLP24_DANRE (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1)

HSP 1 Score: 224.172 bits (570), Expect = 4.500e-74
Identity = 100/166 (60.24%), Postives = 136/166 (81.93%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLE 176
            MRI+KC+FC +P+YPGHG  FVRNDCKVF+FCRSKCHKNFKKK+NPRK +WTKAFRK+AGKEL VD S EFEKRRN PVKY+RELW++T+ A++++E+IK+KRQA+ I++RLKK + ++KA DI EV++++ LI++P AG     +A  +ED+  + + E +E  E
Sbjct:    1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAGKELTVDNSLEFEKRRNTPVKYNRELWSKTVEAMRKVESIKHKRQARFIMNRLKKGKELEKAADISEVKKNIHLIKAPHAG-----QAKQLEDKMVQKLAEDVEMDE 161          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783334|sp|Q9VGN9.1|RLP24_DROME (RecName: Full=Probable ribosome biogenesis protein RLP24)

HSP 1 Score: 212.616 bits (540), Expect = 4.393e-69
Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLK 152
            MRI  C+FC S IYPGHG  FVRNDCKVFKFCR KCHK FK+KKNPRK  WTKA+RK AGKELA+DPSFEFEKRRN P+KY RE W + + A+KR+  IK KR +  +++RL+K R ++   D+++VQR+++LIRSPAAGLK
Sbjct:    1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAGKELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIKEKRTSHFVMERLRKGRQVEIQMDVKDVQRNMSLIRSPAAGLK 142          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783309|sp|Q86B05.1|RLP24_DICDI (RecName: Full=Probable ribosome biogenesis protein RLP24)

HSP 1 Score: 189.119 bits (479), Expect = 2.617e-60
Identity = 87/164 (53.05%), Postives = 115/164 (70.12%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIET 174
            MRI+KC+FC  P+YPGHG  FVRNDCK F+FCRSKCHKNFK K+NPRK +WTKAFRK  GKE+ VD + EFEK+RN PVKYDREL   TI A+ R++ IK +R+     +R++  + +QK Q ++E+ ++L+LIR P+A      K  +     AE IE+   T
Sbjct:    1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRKLNGKEMTVDKTLEFEKKRNRPVKYDRELINNTIIAMARVQKIKERREKTFYKNRMEGVKGMQKKQKLKEINQNLSLIRGPSA----LNKLQERIKNNAEKIEQLTTT 160          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783280|sp|O22165.1|RLP24_ARATH (RecName: Full=Probable ribosome biogenesis protein RLP24)

HSP 1 Score: 171.785 bits (434), Expect = 1.754e-53
Identity = 74/139 (53.24%), Postives = 105/139 (75.54%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAA 149
            MR++KC+FC S IYPGHG  FVRND K+F+FCRSKCHKNFK K+NPRK KWTKAFR   GK++  D +FEFEK+RN P +YDR +   T+ A+K+I  I+  R+AKHI +RLK ++  +   D++E+ +++ ++++P A
Sbjct:    1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENRLKPNKQKKLNDDMKELDQNIHMVQAPGA 139          
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783287|sp|Q6CNW3.1|RLP24_KLULA (RecName: Full=Ribosome biogenesis protein RLP24)

HSP 1 Score: 160.999 bits (406), Expect = 8.876e-49
Identity = 84/171 (49.12%), Postives = 107/171 (62.57%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLD 181
            MR+  C FC SP YPGHG  FVRND K F+FCRSKCHK FK+++NPRK +WTKAFRK AGKELAVD +  F +RRN PV+Y+REL   T+ A+ RIE I+ +R+     +R+       K  + R+  RD AL+ S    L    +  +VE     A EEAIE   D  +D
Sbjct:    1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSRIEEIRQRRERAFYKNRM-------KGNNERDFLRDKALVESNPELL----RLREVELARQAAKEEAIEQASDEEMD 160          
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|585652749|ref|XP_006884198.1| (PREDICTED: probable ribosome biogenesis protein RLP24-like [Elephantulus edwardii])

HSP 1 Score: 233.417 bits (594), Expect = 3.387e-75
Identity = 107/168 (63.69%), Postives = 138/168 (82.14%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +T+ A+KR+E IK KRQA +I++RLKK++ +QKAQDI+EV++++ LIR+P AG     K   +E++  + ++E ++ +EDA
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTVDAMKRVEEIKQKRQATYIMNRLKKNKELQKAQDIKEVKQNIHLIRAPVAG-----KGKQLEEKMVQKLQEDVD-MEDA 162          
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|724871075|ref|XP_010370877.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Rhinopithecus roxellana] >gi|724970299|ref|XP_010357446.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Rhinopithecus roxellana])

HSP 1 Score: 233.032 bits (593), Expect = 4.079e-75
Identity = 107/169 (63.31%), Postives = 137/169 (81.07%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P  G     K   +E++  + ++E ++ +EDAP
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLVG-----KGKQLEEKMVQQLQEDVD-MEDAP 163          
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|558112483|ref|XP_006085994.1| (probable ribosome biogenesis protein RLP24 [Myotis lucifugus])

HSP 1 Score: 233.032 bits (593), Expect = 4.224e-75
Identity = 110/172 (63.95%), Postives = 137/172 (79.65%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEE--AIETLEDAPL 180
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QKAQDI+EV++++ LIR+P A      K   +ED+    ++E  A+E + D P+
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKAQDIKEVKQNIHLIRAPFA-----CKGKQLEDKMVHKLQEDVAMEVVSDNPV 167          
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|524947148|ref|XP_005073792.1| (probable ribosome biogenesis protein RLP24 [Mesocricetus auratus])

HSP 1 Score: 233.032 bits (593), Expect = 4.308e-75
Identity = 108/168 (64.29%), Postives = 138/168 (82.14%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178
            MRI+KC+FC  PIYPGHG  FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW++TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG     K   +E++  + ++E ++ +EDA
Sbjct:    1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWSKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDA 162          
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|187607287|ref|NP_001120140.1| (probable ribosome biogenesis protein RLP24 [Xenopus tropicalis] >gi|166796745|gb|AAI59095.1| LOC100145176 protein [Xenopus tropicalis] >gi|1043429138|gb|OCA41766.1| hypothetical protein XENTR_v90008759mg [Xenopus tropicalis])

HSP 1 Score: 233.032 bits (593), Expect = 4.356e-75
Identity = 106/168 (63.10%), Postives = 140/168 (83.33%), Query Frame = 0
Query:   11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178
            MR++KC+FC +PIYPGHG  FVRNDCKVF+FCRSKCHKNFKKK+NPRK +WTKAFRK+AGKEL VD +FEFEKRRNEPVKY RELW++T+ A+KR+E IK KRQA+ I++RLKK + +QKAQDI+EV++++ LIR+P AG     K   +ED+  + ++E ++ +ED+
Sbjct:    1 MRVEKCYFCSAPIYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKIRWTKAFRKSAGKELTVDNAFEFEKRRNEPVKYKRELWSKTVEAMKRVEEIKQKRQARFIMNRLKKGKELQKAQDIKEVKQNIHLIRAPHAG-----KTKQLEDKMVQKLQEDVD-MEDS 162          
The following BLAST results are available for this feature:
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000059462.171e-7662.75supercontig:LSalAtl2s:LSalAtl2s321:157733:158373:-... [more]
EMLSAG000000031712.284e-1233.33supercontig:LSalAtl2s:LSalAtl2s176:340392:341735:-... [more]
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BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|52783333|sp|Q9UHA3.1|RLP24_HUMAN3.740e-7863.91RecName: Full=Probable ribosome biogenesis protein... [more]
gi|75042578|sp|Q5RF04.1|RLP24_PONAB1.001e-7763.31RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783266|sp|Q6P6G7.1|RLP24_RAT1.973e-7764.29RecName: Full=Probable ribosome biogenesis protein... [more]
gi|108860942|sp|Q3SZ12.1|RLP24_BOVIN3.409e-7763.69RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783322|sp|Q99L28.1|RLP24_MOUSE1.135e-7663.86RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783306|sp|Q7ZTZ2.1|RLP24_DANRE4.500e-7460.24RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783334|sp|Q9VGN9.1|RLP24_DROME4.393e-6964.79RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783309|sp|Q86B05.1|RLP24_DICDI2.617e-6053.05RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783280|sp|O22165.1|RLP24_ARATH1.754e-5353.24RecName: Full=Probable ribosome biogenesis protein... [more]
gi|52783287|sp|Q6CNW3.1|RLP24_KLULA8.876e-4949.12RecName: Full=Ribosome biogenesis protein RLP24[more]

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BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|585652749|ref|XP_006884198.1|3.387e-7563.69PREDICTED: probable ribosome biogenesis protein RL... [more]
gi|724871075|ref|XP_010370877.1|4.079e-7563.31PREDICTED: probable ribosome biogenesis protein RL... [more]
gi|558112483|ref|XP_006085994.1|4.224e-7563.95probable ribosome biogenesis protein RLP24 [Myotis... [more]
gi|524947148|ref|XP_005073792.1|4.308e-7564.29probable ribosome biogenesis protein RLP24 [Mesocr... [more]
gi|187607287|ref|NP_001120140.1|4.356e-7563.10probable ribosome biogenesis protein RLP24 [Xenopu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold384_size188899supercontigscaffold384_size188899:123253..125831 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:ribosome biogenesis
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold384_size188899-snap-gene-0.24-mRNA-1maker-scaffold384_size188899-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold384_size188899:123253..125831+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold384_size188899-snap-gene-0.24 ID=maker-scaffold384_size188899-snap-gene-0.24|Name=probable ribosome biogenesis protein rlp24|organism=Tigriopus kingsejongensis|type=gene|length=2579bp|location=Sequence derived from alignment at scaffold384_size188899:123253..125831+ (Tigriopus kingsejongensis)
CCGCAAATCAGCTGACCGTCAGCTGACAGTGGGACCCAAACAAACATCCA CGTGAGTTGGTTGAGGCAGAGAATCGGGAGGGCGACATGCGGATCGACAA GTGTTTCTTCTGCGGCTCGCCCATCTACCCGGGTCATGGGACCCATTTCG TGCGCAACGACTGTAAAGTGAGTGGCCTACGAGTTTTCATAGGGGTGGGA CTTGGGCGGAGATTCATGGCTGGGGGCTGTTTTGGTTCTCCGCAGGTCTT CAAATTTTGCCGTTCCAAATGTCACAAGAACTTCAAGAAGAAGAAGAACC CGCGTAAGGCCAAGTGGACCAAGGCCTTCCGCAAGAATGCGGGCAAGGAG TTGGCCGTGGATCCGTCCTTCGAGTTCGAGAAGCGTCGGAATGAGCCCGT CAAATACGACCGCGAGCTCTGGACTCAAACCAGTAAGTGCCCATGGGCGT GTGTCCCATCCTTCAGGTACCTGCGGGCTGAGAGTTGGTGATAGGTCCAG CCCAGGGTAATGTGCTACTTTAGCCCCAAGAGGTTGCGTGGGATATTTTC CCCCATTGCGCAGTGAGCGTGACCACTTAGAGTGGCCTCAAATCTACCAA CCTTCCCCAGCAATTTTTTATACATCCTGCTGCCCCTTCGTAGGTCTCCT CTTTATTCTCGTCCCAAGAACGAGGCGATTAGTAAAAGGCTAGATGTTGT GGGGAATGGCCAGTGACTCAGATTGGATCAGATCACGTACTCAAACTGAG TCATCTTTAAATAGATGGGATGAACATGTCTGGGGGGTCTTTCATTACTG GCAGAAAGTGTGCATTGAGTTCAGAGTTTAACCAGCTGAGGATGATCTCT GGGGTTGGATGATCTCATTCAATTCGTGATCATGGTGATCACTGGGTCAG ATGTTCACAAACTATCGGCCAACGCCATAAATGAAGAATTGACAGCAGGG ATGGCCAAGATTTGGACGGAGGTGAAGGGGTAGATGGCCATCTGAACTCT TTTTTAAGACTCGATCGATCCCTGGCACTCGGATAAAAACTACGTGGGTC TGTCCGGTCACAGCGCCAGGGCACGCAATGTGGGAATATCGCTCGTGCAA CCTCTTGGGGGCTCAACTAGAACTTTATCGGCGCCGATTAGGCCGGGGTG GACCCGAAGGTCGGATAGATGAGGTTGACCAGGGTCGATATTAGGGCCAT TGGGAGCCAGGATGAAGCGAGTTAGCACTGAGCCGACTGGGATCGCCCCT CGGCGATGGAGGGATTCCGACCCAACCGCTATGAACTTTGTCTGAGAACT CCAGATCATAGCTGACTGGCGAAGATACCTCGCTGTGTTCTGTTACGAAT TGATCATGAATGGTGGCCTGACCCTCGAGGTACCACCACAGGTTCACTCA TTTGTGCCCATCAACTCGCGCACCTGGGGCCTGGAACACACTAGTTCTCT CACCGTCTAGAGGTGCATTGCGCTGGGTAACCCACCTCTGCCGTCTCACT ATCGCCAGAAGCACCGAACTCGGTCGGCCCAGCTGACTCTATTCGTACCT TTAGCTAACTATTCCCGGTCCATGCACTGGGATCAACTAGGCTCACCACG CCCGCCCATTAGCCCTGTATCCCGAAGCGCCCTGAAGGGCCCATATTGCA TTTGATCGATCAACACAGCGCGGAGGACCCGACTTGACTTATTAGCACCA TGAGCAGAACCATGAGATTGATTCACAATGATGGGTTGGGCACGTGCATT CCCAACCCCAAATGTATGTCACAATGGTCAGCGATACCATGCTCACCCTA AGCAAAGCGTGGTGGCTGTGGACCACAGCGGTTTGAAACATGTCCTCAGC AGTAGTGTCAATGGTGGCATAGATATAGTGTAGGTGATCGCACCCTGGTG GAGGTTTTGTGTACTCGTTCATGAAAGTCTTTATGGGGAAACGCAGGTTC ACCGTTGTGTTTTGAGTTAGTTGGCATGCAGCCCCCTTACAATCTAGTAC TTTTCTGGGTGGGTAGTCGGGAATGACCCTGGCACTAGATAAGCACGGGA AGGACATGGAATAACGAATGAGTAACACTGGACGAATTCCCGATCAAGGG GCTCAAGAAAATCGTGCGTCGCCTCTGACGGGCCGTTACTTCATCCACCC GTTCTCACGTGTGCGTTTCCTTTCAGTCACGGCTGTCAAGCGCATTGAGA CCATCAAAAATAAGCGCCAAGCCAAGCACATTCTGGACCGATTGAAGAAG TCCCGAGCGATCCAAAAAGCGCAGGACATACGCGAGGTTCAGCGAGATCT GGCCTTAATCCGCTCACCGGCCGCGGGCTTGAAACGCCCCGCCAAGGCCA TGGACGTCGAGGACGAAGAGGCTGAGGCCATCGAAGAGGCCATTGAAACC CTGGAGGATGCCCCATTGGACACCAGTATCAAGATCTCGGCCAAGAAAGC CCAGCGAACGCCGAAAAGGACACGGGCTAAGATTCAGGAAATCCGGGATA CGGATCAAGAAATGCAGGAAAACTAGATTCTAACCGGTTCTCTTCTGGAA GATGCACACAGATAAATATGTCAAGCCCC
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Synonyms
The feature 'probable ribosome biogenesis protein rlp24' has the following synonyms
Synonym
Tk06445
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