dead box atp-dependent rna, maker-scaffold385_size188773-snap-gene-0.26 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000005688 (supercontig:LSalAtl2s:LSalAtl2s309:17700:19565:1 gene:EMLSAG00000005688 transcript:EMLSAT00000005688 description:"augustus_masked-LSalAtl2s309-processed-gene-0.3") HSP 1 Score: 457.603 bits (1176), Expect = 4.820e-155 Identity = 261/620 (42.10%), Postives = 369/620 (59.52%), Query Frame = 0 Query: 7 MGLFQVQRYWSEDEGEPVQPDEV------GPLKKRPRP-----DSAAPEIEAEVE------AEAAAASSPPPKKKKKKSAKKKK---KASASELAEAGFTVLGQDL--NASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTP--QRPFEQEQQDLVRR----QPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRL------QRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEF--VGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANK--ESVVTDTVDEAALDEDEYKRASEKAAEVLKEEKAQNPARGKFRRKVKGKSSQAP 588 M LF ++RY+ E++ E +E G + ++ R D E + ++ A++ A + P K + K K + F +LG D S+ K +R+LP+WL +P+I++ D ++DQ+ + D+ G+ E R L GI FPVQRQ++PHLL S + +RP D+CVSAPTGSGKTLAFV+PIVQA++ RVVP RALV+LPVQ+LA Q+ +VF ++TAG L+V LL+ + + EQ +LV + + DI+I TPGRLV+HL T LRYL+IDEAD+VME + +DWL +E + +RP P+TV +PLQKLLFSATLSQ+PE+LQ LNL+EP+LF S V+ P + E + +TTP +L E V V + + KP++L+ LL T + ++F +I +AHFL LL++Y + VGEMSS R IL++ K KI+ LV TDA+ARG+DIG +D V+SYD+P+FIKTYIHRVGRTARAG G A TL+ + + IL+ ANK +SVV +DE LD D Y+ +A++ L +EK N R K RR GK+ + P Sbjct: 1 MELFHMKRYYDEEDEESQNAEESSVKKLKGKIVRKKRKIACNVDDLKEEEDKAIDDDDKGCADSEAMDTSIPSKDDDNNVIKDSLKVKKPKKASKSSDFMILGADSVQKQSKKKARRILPRWLXEPNIISDDLKDDQMLVCDIEGISESLRDKLKNNGIRYLFPVQRQIVPHLLDSSLKHYYRPSDICVSAPTGSGKTLAFVLPIVQALQNRVVPRIRALVILPVQDLALQIYKVFKSYTAGEKLKVILLSSGQGKNVKTEQSELVCKGLGGDNDYHSLVDIIIATPGRLVEHLHNTPGFSLQHLRYLIIDEADKVMEDVSNDWLSQVEAAVYSGVNRRRPG--PLTVKNANMKSLPLQKLLFSATLSQSPEKLQELNLYEPKLFCSYVK-----PKDIVGKNEMNILESFTTPMDLSERYVSVHNLMNKPLVLKKLLDTEGIKNCLIFVKSIVNAHFLTVLLRQYGVTVGEMSSNVKKSRKLILDKFKKKKIDYLVCTDALARGIDIGIIDNVISYDSPRFIKTYIHRVGRTARAGKPGTAYTLIHEDSEKESFKEILEGANKDFDSVVEYKIDEENLDMDNYELIRSQASKFLHDEK--NSKRKKGRR---GKNVKNP 608
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 147.517 bits (371), Expect = 9.790e-39 Identity = 127/405 (31.36%), Postives = 196/405 (48.40%), Query Frame = 0 Query: 118 QEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPR---ALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLV-RRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLK-KPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNS-DKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLV 516 +ED +D+ GL E G +Q++ IP L RD+ A TGSGKT AF +P++Q++ + P+ ALV+ P +ELA Q+++ F G ++ VK + + Q LV ++P I+I TPGRL+DH+ T D L+YL++DEADR++ + + L R + +LFSAT+++ +LQ +L +P E +Y T +L + + + PLK K M L H++ I+F++T LA LL+ ++ Q S +KR LN+ K+ +IL++TD +RG+DI VD+V++YD P K YIHRVGRTARAG +G A+T V Sbjct: 20 EEDTTTFSDL-GLTEVLCEACESLGWKTPSKIQKEAIPVALT--------GRDIIGLAETGSGKTAAFALPVLQSLLEK----PQRFFALVLTPTRELAYQISEQFEKL--GKSIGVKCVVLVGGMDMVSQALVLGKKPH------IIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGR--------------KNMLFSATMTKKVAKLQRASLRDP------------------VRVEVSSKYQTVDKLLQYYLFI--PLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFV 369
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12") HSP 1 Score: 149.828 bits (377), Expect = 2.063e-38 Identity = 126/394 (31.98%), Postives = 194/394 (49.24%), Query Frame = 0 Query: 148 PVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGP-----RALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDL-VRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEP-RLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNSD-KRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKL-RNILKEA 532 P+Q IP L RDVC A TG+GKT +++PI++ R++ P R +V++P +EL QV QV + T++ + L + + Q+L +R+ P DI+I TPGRL+DH+ T + L++DEADR+++ + + + +++ Q LLFSAT++ L T+ L +P ++F V+S L Q EFV +E IL L+ IVF T H L LL +RVGE+ S +R L + K +I++L++TD ARG+DI V V++Y P ++ YIHRVGRTARAG AG ++++ AG+G+RK+ R I+K A Sbjct: 207 PIQASTIPVALA--------GRDVCGCAATGTGKTAXYMLPILE----RLLFRPNQSITRVIVLVPTRELGVQVYQVSKQLSQFTSIDIALSVG--GLDLKAQELALRKNP------DIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEI----------------VKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIF---VDSNKVVAWNLRQ--EFVRIRANRESDREG------------ILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSI--AGEGDRKMVREIVKNA 545
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42") HSP 1 Score: 142.895 bits (359), Expect = 1.604e-36 Identity = 121/414 (29.23%), Postives = 192/414 (46.38%), Query Frame = 0 Query: 137 NLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPG-------PRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTL--NLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRT--RPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNSDK----RGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGE---RKLRNILKEA 532 N+++ TR PVQ+ +P +L + D+ A TGSGKT F++PI+ ++ ++ + PR L++ P +EL Q+ + A N+ +++ E + L+ + DIL TPGRL+D L H + + + +LVIDEADR++E +G E + + M T R Q LLFSAT P ++Q L + LF V G A ++++ +V V+D K +L+ L P K ++F FLA L L +S + D+ R L K G ILV+T+ +RG+DI V LV++YD P+ I TY+HR+GR+ R G +G +++ E+ + L N+LKEA Sbjct: 178 NIARCSYTRPTPVQKHAVPIILMK--------HDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNR------VDILSATPGRLIDMLGKEH-ISFENIEFLVIDEADRMLE------MGFRESIDEVVNHFTMPGTTKR------QTLLFSATF---PPEIQILASEYLKDYLFLKV------GVVGGAS-----------EDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLC---LDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVLKEA 541
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000002659 (supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1 gene:EMLSAG00000002659 transcript:EMLSAT00000002659 description:"maker-LSalAtl2s153-augustus-gene-5.7") HSP 1 Score: 142.124 bits (357), Expect = 3.426e-36 Identity = 120/396 (30.30%), Postives = 183/396 (46.21%), Query Frame = 0 Query: 132 EDTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAV-KRRVVP--GPRALVVLPVQELAAQVAQV------FHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEM-SSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARA-GVAGHALTLV 516 ++T + G ++ +Q Q IPHLL RD+ +A TGSGKTL+F++P V+ + K + +P G +++ P +EL+ Q V +H T G L+ E Q L + +I++ TPGRL+DHL T + L+ L+IDEADR+++ E +++ ++ P Q +LFSAT ++ E L L L + ++ + +S + AA G E G P+E K+ ++L L+ K +VF ++ + L DL V + Q KR Q + IL+ TD ARG+DI DVD +V YD K YIHRVGRTAR G GHAL ++ Sbjct: 128 DNTLNGIQDMGFSQMTEIQAQTIPHLL--------EGRDLVGAAKTGSGKTLSFLIPAVELIYKLKFMPRNGTGVIIISPTRELSMQTFGVLRELLKYHCHTYG------LVMGGANRNTEAQKLNKG-------INIVVATPGRLLDHLRNTKDFLYKNLQCLIIDEADRILDV-------GFEEEMKK---------IIQLLPKKRQTMLFSATTTKKTEDLVKLALKKEPIYIGI-DSANDNGAATVSGLE-QGYVICPSE------------KRLLLLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVQSIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPDVDWIVQYDPTDDPKEYIHRVGRTARGEGGKGHALLIL 472
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33") HSP 1 Score: 140.198 bits (352), Expect = 3.662e-35 Identity = 116/382 (30.37%), Postives = 182/382 (47.64%), Query Frame = 0 Query: 160 ESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRV---VPGPRALVVLPVQELAAQVAQVF------HAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRV---GEMSSQNSDKRGRILNQL-KSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNI 528 ES FR DV +A TG GKTLAFV+PI++ + R + G ALV+ P +ELA Q+ + H F+AG L+ + + E + L +I+I TPGRL+ H+ D L+ LV+DEADR ++ LG E A L P Q LLFSAT +++ + L L+L P ++ S+ E +++TP +L ++ +V + K M+L +++ +K +VF + + A + LL++ + V G + + +R I + + +L +TD ARG+D VD V D P+ KTY+HRVGRTAR G +L L+ + E L+ + Sbjct: 131 ESIGLCFRGSDVLGAAKTGCGKTLAFVIPILELLHREKWTKLDGLGALVITPTRELAYQIFETLRKVGKHHEFSAG------LVIGGKDLQYETKRL--------STCNIVICTPGRLLQHMDENPQFDPITLQILVLDEADRCLD------LGFAE----------TMNAILGNLPKERQTLLFSATQTRSIKDLGRLSLKNP-VYVSIHEH---------------SKFSTPEKLTQNYMVCELDKKMDMLLS-FIKSHRKSKTLVFVQSCKQARYFQELLKKIRVGVSVLGLYGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLTPSEEEGMLKQL 465
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000010227 (supercontig:LSalAtl2s:LSalAtl2s679:403636:405959:-1 gene:EMLSAG00000010227 transcript:EMLSAT00000010227 description:"maker-LSalAtl2s679-augustus-gene-3.17") HSP 1 Score: 136.346 bits (342), Expect = 2.927e-34 Identity = 115/391 (29.41%), Postives = 184/391 (47.06%), Query Frame = 0 Query: 148 PVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAV-----KRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGT-NLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLF-THALD----------WAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAK-AIVFTNTIEHAHFLAALLQEY----DLRVGEMSSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLV 516 P+Q IP L +DVC A TGSGKTLAFV+PI++ + + V AL++ P +ELA+Q++QV F + +L L+ + L + + + A I+I TPGRL D L T +++ + + L++DEADR++ RL A ++ L P + LFSAT +++ ++L L P L V+ G + +TP +L + P KK L L+T K +VF +T + + LL+ + + V + Q R +I ++ K + +LV TD ++RG+D DV+ VV +DAPK + ++HR+GRTAR+G G+AL L+ Sbjct: 38 PIQAXAIPLFLG--------LKDVCAEAVTGSGKTLAFVIPILEILLNSSNEESKVHDIGALILSPTRELASQISQVLEVFLSKIPSLNSLLIIGGGGSSSVGETLRKFEKEG---AKIIIATPGRLEDILTGKTESINQLKAEKMARGFKSTKILILDEADRLL-------------RLGFETAINTIISFL---PKQRRTSLFSATQTKDLDELIRAGLRNPVL----VKVKEHGKE---------NELSTPIKLTNYYMKCDPPAKKFATLLKFLKTEAAGKKTMVFFSTCACVEYFSTLLERFLKDDNTPVFALHGQKGGTRFKIFDKFKKLDMGVLVCTDVLSRGVDFPDVEWVVQFDAPKTAEAFVHRIGRTARSGAVGNALLLL 388
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000012967 (supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:1 gene:EMLSAG00000012967 transcript:EMLSAT00000012967 description:"maker-LSalAtl2s98-augustus-gene-12.20") HSP 1 Score: 136.732 bits (343), Expect = 4.482e-34 Identity = 119/393 (30.28%), Postives = 180/393 (45.80%), Query Frame = 0 Query: 129 GLDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAK---AIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNSDKRGRILNQLK--SGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLV 516 GL + R + + G P+QR+ IP +L RDV A TGSGKT AF++P+++ + PRA+++ P +EL+ Q + F + L+ + E++ P D+LI TPGR V HL L ++Y+V DEADR+ E + L + GRL Q LLFSATL + + L +P L V++ P L + + +D KP +L H+L+ + +AK IVF T H ++ LL ++ + SQ D R +N K S + ++L+ TD ARG+DI +D V++Y P K +IHRVGR ARAG +G A++ V Sbjct: 37 GLSREVFRGIQKKGYKVPTPIQRKTIPLIL--------EGRDVVGMARTGSGKTGAFLIPLLEKLCSGNRGKPRAMILSPTRELSLQTLRFFKELAKFSGLKAMSILGGESMEKQ---FAGMHNNP----DVLIATPGRFV-HLCVEMNLRLDAIQYVVFDEADRLFELGFGEQLKEILGRLSDDR----------------QTLLFSATLPKLLVEFAKAGLNDPTLVRLDVDTK------------------IPETLSLAFISCRDE-GKPALLVHILQ-KLIAKEEQTIVFLATRHHVEYIHLLLDSAEISNTYIYSQ-LDPSARKINTAKFTSNQCSVLLVTDLAARGIDIPLLDNVINYHFPAKSKLFIHRVGRVARAGRSGLAISFV 376
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39") HSP 1 Score: 134.806 bits (338), Expect = 4.921e-34 Identity = 108/379 (28.50%), Postives = 180/379 (47.49%), Query Frame = 0 Query: 169 RDVCVSAPTGSGKTLAFVVPIVQAV-----KRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTL--NLFEPRLFTSVVESPSSGPAA--LAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRV-GEMSSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTL---VEAGKGERKLRNILKEANK 534 +++ TGSGKTL FV+P + + +R GP L++ P +ELA Q+ V F + + L + + +DL R A+I++ TPGRL+D L+ +D + Y+V+DEADR+++ +G P +R Q L++SAT P ++Q+L + F + V S A + Q F+F ++ ++E L + + K K ++F T L L+ ++ V G + R R L++ +SG+INILV+TD +RG+D+ D+ +V++YD P I+ Y+HR+GRT R G + + VE G + L N+LKEA++ Sbjct: 116 KNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVDGFA--SKIPTACLVGGNHKQGQIRDLNR-------GAEIVVATPGRLID-LMEDGDVDLKRCSYMVLDEADRMLD------MGF----------EPQIRKIMRQVRPDRQLLMWSATW---PSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESK--------------KVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFDEVEDGSKAKDLINVLKEAHQ 451
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18") HSP 1 Score: 132.494 bits (332), Expect = 1.028e-32 Identity = 116/404 (28.71%), Postives = 186/404 (46.04%), Query Frame = 0 Query: 138 LSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPI---VQAVKRRVV-----PGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVME-AIHHDWLGLLEGRLQRPAAYPMTVA---------------TLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEM-SSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLV 516 + + G T P+QRQ IP L + RD+ A TGSGKT AF++P+ +Q++ + GP A+++ P +ELA Q+ + + F G L + + +E Q R +I+I TPGRL+D +L L ++ Y+V+DEADR+++ D +L+ P+T A +R+ Q ++F+AT+ E+L L P +VV ++G P E E +V + K L +L I+F N + A LA L++ + + ++R L+ LK+G +ILV+TD RG+DI +V LV++YD K I+ Y HR+GRT RAG +G A++ Sbjct: 339 IEKVGYTEPTPIQRQAIPIGL--------QNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTF--GGPLGIXTVAVIGGLSREDQGFKLRLG-----CEIVIATPGRLID-VLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILD-------HMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRP----AVV---------------YIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFC 700
BLAST of dead box atp-dependent rna vs. SwissProt
Match: gi|1179699141|sp|Q5ACU6.3|RRP3_CANAL (RecName: Full=ATP-dependent rRNA helicase RRP3) HSP 1 Score: 182.185 bits (461), Expect = 3.413e-49 Identity = 135/396 (34.09%), Postives = 193/396 (48.74%), Query Frame = 0 Query: 133 DTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEP-RLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNS-DKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLR 526 D ++ T+ P+Q + IPH L +D+ A TGSGKT AF +PI+Q++ P ALV+ P +ELA Q+ F A + LR + + +DL+R+ P +++ TPGR++DHL T L+YLV+DEADR+++ D+ P L+ PI LFSAT++ E+LQ +L P R+ S +Y T L +S+++V D K IL HLL IVFT T+ HA A L + + Q S +R LN+ KS + NILV+TD ARG+DI VD+V++YD P K YIHRVGRTARAG +G +++L+ E LR Sbjct: 128 DLLESIESMKFTKPTPIQSEAIPHAL--------EGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQP-YFALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRK-PH------VIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDM---DF-------------GPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVS-------------------SKYQTADNLVQSMMLVNDGYKNT-ILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLR 471
BLAST of dead box atp-dependent rna vs. SwissProt
Match: gi|223634733|sp|A5DQF1.2|RRP3_PICGU (RecName: Full=ATP-dependent rRNA helicase RRP3) HSP 1 Score: 178.718 bits (452), Expect = 1.773e-48 Identity = 131/380 (34.47%), Postives = 184/380 (48.42%), Query Frame = 0 Query: 148 PVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLR 526 P+Q IPH L +D+ A TGSGKT AF +PI+Q++ P ALV+ P +ELA Q+ + F A +G +R + + +DL+R+ P IL+ TPGR++DHL T L+YLV+DEADR+++ D+ P L+ P LFSAT++ +LQ +L EP V S +Y T L +S+++V D K ++ HLL IVFT T H L + + Q +R LN+ KSGK NIL++TD ARG+DI VD+V++YD P K YIHRVGRTARAG +G +++LV E LR Sbjct: 89 PIQSGAIPHAL--------EGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP-YYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRK-PH------ILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDM---DF-------------GPALDKILKVIPTKRTTYLFSATMTNKIAKLQRASLHEP---VKVAVS---------------NKYQTADNLVQSMMLVSDGYKNTFLI-HLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLR 417
BLAST of dead box atp-dependent rna vs. SwissProt
Match: gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA (RecName: Full=ATP-dependent rRNA helicase RRP3) HSP 1 Score: 177.948 bits (450), Expect = 3.822e-48 Identity = 129/391 (32.99%), Postives = 188/391 (48.08%), Query Frame = 0 Query: 138 LSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEP-RLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLR 526 + Q T+ P+Q + IPH L +D+ A TGSGKT AF +PI+QA+ LV+ P +ELA Q+ + F A + LR + + +DL+R+ P IL+ TPGR++DHL T L+YLV+DEADR+++ D+ P L+ P LFSAT++ +LQ +L P R+ S +Y T L +S+++V D K ++ HLL I+FT T H+ A L + + Q +R LN+ K+GK NIL++TD ARG+DI VD+V++YD P K YIHRVGRTARAG +G +++L+ E LR Sbjct: 80 IQQMKFTKPTPIQSEAIPHAL--------EGKDIIGLAQTGSGKTAAFAIPILQAL-WEAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRK-PH------ILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDM---DF-------------GPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVS-------------------NKYQTADNLVQSMMLVSDGYKNTYLI-HLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDLEMYLR 418
BLAST of dead box atp-dependent rna vs. SwissProt
Match: gi|74661318|sp|Q6FST5.1|DBP6_CANGA (RecName: Full=ATP-dependent RNA helicase DBP6 [[Candida] glabrata CBS 138]) HSP 1 Score: 179.874 bits (455), Expect = 1.455e-47 Identity = 126/401 (31.42%), Postives = 195/401 (48.63%), Query Frame = 0 Query: 147 FPVQRQVIPHLLP------ESGQRLFRPR--DVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPM----AKAIVFTNTIEHAHFLAALLQE--------YDLRVGEMSSQNSDKRGRIL-----NQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGE 522 FP+Q ++ L ++ ++ F R D+ V+A TGSGKTLA+ +PI+Q + R V R L++LP + L QV Q GT+L + + + F +E + L++ +P DI ITTPGRLVDHL ++ L++LV+DEADR++ +W+ + + + M P + K++FSATL+ N E+L L L+ P LF + + V Y P LQE +Q P K + L K +VF + E + L LL+ + V ++S NS R L + + N+L++TD M+RG+DI ++ V++YD P + Y+HR GRTARA G A ++ GKGE Sbjct: 217 FPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGKTLAYSIPIIQTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEGTSLVITVSKLENSFNEEHKRLLKTEP------DIFITTPGRLVDHLT-NSSISLRNLKFLVLDEADRLLNQSFQNWIPEVMSKFKSDKFDQM--------PGSIIKMVFSATLTTNTEKLNDLQLYNPTLFAT----------------DSVKLYNLPPTLQE--YQLQIPSAKSVYKPLYLLKLLEQLSGGKTLVFVRSNESSLKLEVLLKSLIKGHMTTLQIVVHSINSNNSKAENRRLVTDFTKESLPNQTNVLITTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRTARANKDGKAYNML-VGKGE 583
BLAST of dead box atp-dependent rna vs. SwissProt
Match: gi|74621115|sp|Q8SR63.1|RRP3_ENCCU (RecName: Full=ATP-dependent rRNA helicase RRP3) HSP 1 Score: 171.785 bits (434), Expect = 1.302e-46 Identity = 152/453 (33.55%), Postives = 222/453 (49.01%), Query Frame = 0 Query: 130 LDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAV--KRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRV----GEMSSQNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLV------EAGKGERKLRNILKEANKESVVTDTVDEAALDEDEYKRASEKAAEVLKEEKAQN 570 +DE + + GITR VQRQVIP +L DV + TGSGKTLAFV+PIV + K R LVV P +EL++Q+A+ F+ F A T LRV LL F + L +R P +++ TPGR+ +H+L T + ++R V+DEADR E D++ LE + +LR Q LLF+AT+S +L + S+++ P + A +Y T L+E + V K +++ L ++ M+ IVF + A ++ L GE+S +KR + K + N+LV TD +RG+DI VDLV+++D PK K YIHRVGRTARAG +G A+TLV + K E L L+E T+ A ++E A ++A E LKEE+ +N Sbjct: 8 IDESLIKTCQEKGITRPTEVQRQVIPAVLGGG--------DVIAVSQTGSGKTLAFVLPIVSHLLQKNR---SFYCLVVAPTRELSSQIAECFNMFQA-TGLRVCLLVGGANFNVQANQLSKR-PH------VVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFE---QDFVEDLE----------TIIPSLREKR---QTLLFTATMSDEISKLSS----------SILKRPKTIRTA--------EKYETVPALKEYYLFVAMKWKNSALVELLEMSQGMS-VIVFVSMCVTARVMSLALARLGFCSEALHGELSQ---EKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGTAITLVTQYDVEQIQKIEFTLEKKLEEFKMMKKNFGTIC-ARIEE-----AIQEAQETLKEERKRN 397
BLAST of dead box atp-dependent rna vs. nr
Match: gi|926620563|ref|XP_013775579.1| (ATP-dependent RNA helicase DDX51-like [Limulus polyphemus]) HSP 1 Score: 422.55 bits (1085), Expect = 3.231e-136 Identity = 245/586 (41.81%), Postives = 353/586 (60.24%), Query Frame = 0 Query: 13 QRYWSEDEGEPVQPDEVGPLKKRPRPDSAAPEIEAEVEAEAAAASSPPPKKKKKKSAKKKKKASASELAEAGFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQR-LFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPV-QMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLG------------------LLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAA--LAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY-DLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDE--DEYKRASEKAAEVLKEEKAQNPA 572 +R+ SE E +P+ + K++ + E + E++ + + K+ +S+ + L+EA F VLG+ + KV+RVLP WLA P ++TVD ++ + + GLD ++NL +GI FFPVQ+ VIP LL S Q+ RP+D+CVSAPTGSGKTLAFV+PI+QA+K RVV RAL VLPV++LAAQV VF ++ GT+LRV L Q+ F +EQ+ LV++ + V + DI++ TPGR+VDH+ T LRYLVIDEADR+ME I H WL LE + +++P+T T PLQKLL+SATLSQ+PE+LQ L LF+P+LFTS+ ++P + + EFVG+YTTP EL+E + +P KP+++ + L+ + K + FT ++E+ H L LL+ + V E SS + KR + L Q SGKI+ILV +DAMARG+D+ +VD V+SYD P F+KTYIHRVGRTARAG G A+TL++ K R + +LK A KE V V + L+ + Y+ A ++++ +E Q A Sbjct: 109 ERHISESFIEESKPERIISKKQKITNEKEKNEKDVELQQDIS-------KEVFDESSNEVTNTKDDNLSEA-FPVLGEVERKQKEKVRRVLPDWLANPTVITVDLKDKETKVDTFSGLDSHLKQNLKHSGIHHFFPVQKVVIPWLLGNSVQQYCCRPQDICVSAPTGSGKTLAFVLPIIQALKSRVVCRVRALAVLPVRDLAAQVYNVFCSYCKGTSLRVGLAVGQKTFTEEQKTLVKQGVRNVTSLVDIVVATPGRIVDHIQRTPGFSLESLRYLVIDEADRMMEEITHGWLAAVEKAVFKVSMTSRNCPCTLENNKRALSSFPLTACTFSHILEPLQKLLYSATLSQDPEKLQQLTLFQPKLFTSITKTPGLDVSTNQHERTGEFVGKYTTPEELKEYYTIC-EPSIKPLVVWYFLKHKGFKKVLCFTGSVENTHRLCTLLKGLGGVMVQEFSSGLHLVKRKKCLKQFSSGKIDILVCSDAMARGIDVVNVDYVISYDPPMFVKTYIHRVGRTARAGREGTAITLLQK-KEVRNFQKMLKSAGKERVPELEVCQTDLESYRENYRAALSATSKLIAQENQQKQA 684
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1242738457|ref|XP_022320877.1| (ATP-dependent RNA helicase DDX51-like [Crassostrea virginica]) HSP 1 Score: 414.846 bits (1065), Expect = 3.570e-133 Identity = 236/526 (44.87%), Postives = 332/526 (63.12%), Query Frame = 0 Query: 83 AGFTVLGQDLNASQT-KVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPES------GQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQM-ADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLE-----GRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPS------------------------SGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY-DLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDE--DEYKRASEKAAEVLKEEK 567 GFTVLG D + QT KV RVLP WLA P+++ D ++ +++ GLD D +NL + I FFPVQ QVIP +L G+ FRPRD+CVSAPTGSGKTLA+V+PIVQA+K RVV RA+VVLPV++LAAQV +VF +T GTNL+V ++ Q+ F EQ LVR++ ++ DI++ TPGRLVDH+ T +LR+LVIDEADR+ME + DWL +E G Q P++ + V +PLQKLLFSATLSQNPE+LQ LNLF+PRLFTSVV++P+ + P +G +FVG+YTTP L+E V V D +KP+++ H L + FTN++E H L L++ Y D+ V E++++ + +R ++L++ ++G I++L+ +DAMARGMDI +V V+SYD P +IKTYIHRVGRTARAG G ALTL++ K + + K+A K ++ V ++ ++Y+ A ++ +VLK EK Sbjct: 196 GGFTVLG-DYKSKQTEKVSRVLPDWLASPNVIASDLKQKTTLVSEFKGLDPDIHKNLKENQIDYFFPVQMQVIPEILSAVHHGFVLGRAGFRPRDLCVSAPTGSGKTLAYVLPIVQALKNRVVCRIRAMVVLPVRDLAAQVFKVFLHYTKGTNLKVGMIVGQKQFSVEQHALVRQRLGGLESKVDIVVATPGRLVDHINKTPGFSLTELRFLVIDEADRIMEHVKQDWLSHVENAAFSGDRQPPSS--LNVHNSCKQQMPLQKLLFSATLSQNPEKLQQLNLFQPRLFTSVVDNPAHPKTPRAGSVEMGSDTEDQIKDRLTDPGGEVKG-QFVGKYTTPLGLKEYTVEV-DASEKPLVILHFLHNLGYRHVLCFTNSVESTHRLYHLIRLYGDISVAEITAKLQASRRKKVLHKFQNGSIDVLICSDAMARGMDIDNVQYVISYDPPPYIKTYIHRVGRTARAGKEGIALTLLQK-KEFHHFKTMTKDAGKTNIEKMRVQSQDMEGLLEKYQSALQQLPQVLKNEK 715
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1229162344|ref|XP_022094138.1| (ATP-dependent RNA helicase DDX51-like [Acanthaster planci] >gi|1229162346|ref|XP_022094139.1| ATP-dependent RNA helicase DDX51-like [Acanthaster planci]) HSP 1 Score: 400.208 bits (1027), Expect = 7.696e-130 Identity = 234/506 (46.25%), Postives = 312/506 (61.66%), Query Frame = 0 Query: 81 AEAGFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLP------ESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRL---QRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSS------GPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY-DLRVGEMSS-QNSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDE--DEYKRASEKAAEVLKEEK 567 +E GFTVLG + + KV RVLP WLA P ++ D ++ + + +M LD R+L GI FPVQR VIP +L +G +RPRD+CVSAPTGSGKTLAF +PI+QA+ RVVP RALVVLP ++LA QV++VF + T+LR L+ + F QEQ+ LV+ Q DI++ TPGRLVDH+ T LR+LVIDEADR+ME I DW+ +E RPA P+TV + R +PLQKLLFSATLSQNPE+L LNLF PRL TSVV S S G + + EFVG+YTTP L+E + P +KP+++ HL++T + + + F NT+E L L++ + V E SS Q + +R +IL + K+GKI +L+ +DAMARGMD+ + V+SYD P +IKTYIHRVGRTARAG G A TL++ + KL +LK A K ++ D LD YK+A ++ VLK EK Sbjct: 29 SEKGFTVLGGERKKKKQKVARVLPDWLAHPTVIEHDLRKHSVTVEEMEQLDSRLVRSLLDEGIKSLFPVQRHVIPVILDSARLGIHAGDAGYRPRDLCVSAPTGSGKTLAFALPIIQALLDRVVPRIRALVVLPTRDLAQQVSKVFSSLCKATDLRPALIGGLKKFAQEQRMLVQTSTGETQ-CDIVVATPGRLVDHINKTQGFTLQYLRFLVIDEADRMMEQISQDWISQVEKCAFTGSRPAPGPITVESCRKISLPLQKLLFSATLSQNPEKLIQLNLFRPRLITSVVTSKSRRRDTQLGEGKMEERGEFVGKYTTPVGLKEYYIQCT-PGQKPLLVLHLVQTLNLRQILCFANTVEATRRLYHLIKLVGGVAVAEFSSNQTAGQRRQILKKFKAGKIQLLICSDAMARGMDVENAKYVISYDMPPYIKTYIHRVGRTARAGKTGVAFTLLQPHEVP-KLLKMLKHAGKTNIQKHGTDLRDLDHLVPAYKKALQQLPGVLKMEK 531
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1207912905|ref|XP_021344473.1| (ATP-dependent RNA helicase DDX51-like [Mizuhopecten yessoensis]) HSP 1 Score: 403.675 bits (1036), Expect = 2.046e-129 Identity = 237/517 (45.84%), Postives = 311/517 (60.15%), Query Frame = 0 Query: 81 AEAGFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPE------SGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQ-MADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEG---RLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQG---------FEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLR-VGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALD--EDEYKRASEKAAEVLKEEKAQNPARG 574 E F VLG KV RVLP WLA P+++T D + L + M GLD D L + I+ FFPVQ QVIP LL G+ + P D+CVSAPTGSGKTLAFV+PI+QA+K RV ALVVLPV++LA QV +VF + G++L+V LLT Q+ F+ EQQ LVRR + Q + DI+I TPGRLVDH+ T D + LR+LVIDEAD++ME + DWL +E + RP +T + IPLQKLLFSATLSQNPE LQ LNLF P+LFTS+V+ P+S A G EFVG+YTTP L E V KP+I+ H L + F N++E AH L L++ + V E SS +++R RIL + G+I+I++ TDAMARGMDI +V V+SYD IKTYIHRVGRTARAG G A+TL++ K + + +EA K + V E +L+ +K+A E+ ++LK EK + + G Sbjct: 154 GEKKFPVLGNFQQKVVQKVNRVLPDWLANPNVITADLKSTTLPVGKMTGLDPDLVVQLQENNISHFFPVQMQVIPMLLDTLSVGGMVGKAGYWPSDICVSAPTGSGKTLAFVLPIIQALKGRVHRQVCALVVLPVKDLAVQVFKVFQTYIKGSDLKVGLLTGQKAFKLEQQTLVRRSLRGYQSLVDIIIATPGRLVDHINQTPGFDLSGLRFLVIDEADKMMELVKQDWLVRVENAVYKSTRPQPEILTAQSCLKPRIPLQKLLFSATLSQNPENLQQLNLFLPKLFTSLVK-PASSVCEDATGQSADTEENQGEFVGKYTTPQGLSEYFVECT-AATKPLIILHYLHNLMFTNVLCFVNSVESAHRLYHLIRLMGGKEVREFSSGLQTNRRKRILKEFSKGQIDIIICTDAMARGMDIDNVKFVISYDQTHNIKTYIHRVGRTARAGKVGTAITLLQ-NKEFYHFKKMTREAGKSRIKEQKVSEESLEPIVPAFKKALEEVPQILKAEKIKKSSNG 667
BLAST of dead box atp-dependent rna vs. nr
Match: gi|762163224|ref|XP_011419899.1| (PREDICTED: ATP-dependent RNA helicase DDX51-like [Crassostrea gigas]) HSP 1 Score: 402.905 bits (1034), Expect = 1.493e-128 Identity = 223/489 (45.60%), Postives = 306/489 (62.58%), Query Frame = 0 Query: 83 AGFTVLGQDLNASQT-KVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPES------GQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQM-ADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRL---QRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPS---------------------SGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY-DLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESV 537 GFTVLG D + QT +V RVLP WL+ P+++ D ++ +++ GLD D NL + I FFPVQ QVIP +L G+ FRP D+CVSAPTGSGKTLAFV+PIVQA+K RV+ RA+VVLPV++LA QV +VF +T GTNL+V ++ Q+ F EQ LVR++ ++ DI++ TPGRLVDH+ T LR+LVIDEADR+ME + DWL +E + R A + V +PLQKLLFSATLSQNPE+LQ LNLF+P+LFTSVV+ S SGP +G +FVG+YTTP L+E V V+ +KP+++ H L + FTN++E H L L++ + + V E++++ + +R ++L + ++G I+IL+ +DAMARGMDI DV V+SYD P +IKTYIHRVGRTARAG G AL+L++ K + + KEA K + Sbjct: 193 GGFTVLG-DYKSKQTERVSRVLPDWLSSPNVIASDLKQKTTLVSEFKGLDPDIHLNLKENKIDYFFPVQMQVIPEILDTVRYGFVLGRAGFRPPDICVSAPTGSGKTLAFVLPIVQALKSRVLCRIRAMVVLPVRDLAVQVFKVFLQYTKGTNLKVGMIVGQKQFSVEQHALVRQRVGGLESKVDIVVATPGRLVDHINKTPGFSLTDLRFLVIDEADRIMEHVKQDWLSHVENAVFSGGRTAPSSLNVYNSCKHHMPLQKLLFSATLSQNPEKLQQLNLFQPKLFTSVVDGGSLPRPLESEGEGNKDDQVTDRLSGPGGEVKG-QFVGKYTTPLGLKEYTVEVE-AFEKPLVILHFLHNLQYRHVLCFTNSVESTHRLYHLIRLFGGINVAEITAKLQASRRSKVLKKFQNGSIDILICSDAMARGMDIDDVQYVISYDPPPYIKTYIHRVGRTARAGKEGTALSLLQK-KEFHHFKTMTKEAGKTYI 677
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1339073874|ref|XP_023724217.1| (ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1339073876|ref|XP_023724218.1| ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1339073878|ref|XP_023724219.1| ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1339073880|ref|XP_023724220.1| ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1339073882|ref|XP_023724221.1| ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1339073885|ref|XP_023724222.1| ATP-dependent RNA helicase DDX51 [Cryptotermes secundus] >gi|1330877971|gb|PNF16375.1| hypothetical protein B7P43_G10504 [Cryptotermes secundus] >gi|1330877973|gb|PNF16377.1| hypothetical protein B7P43_G10504 [Cryptotermes secundus] >gi|1330877974|gb|PNF16378.1| hypothetical protein B7P43_G10504 [Cryptotermes secundus]) HSP 1 Score: 398.282 bits (1022), Expect = 4.621e-127 Identity = 254/588 (43.20%), Postives = 348/588 (59.18%), Query Frame = 0 Query: 27 DEVGPLKKRPRPDSAAPEIEAEVEAEAAAASSPPPKKKK---------------KKSAKKKKKASASELAEAGFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPESGQ-RLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQP--VQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRL---QRPAAYP--MTVATLRAAPI-PLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVV-----ESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQ---EYDLRVGEMSSQNSD-KRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALD--EDEYKRASEKAAEVLKEEKAQNPARGKFRRK 579 DE G ++ + D+ + A E EA AS+ KKKK + +A +KK+ E E GFTV+G + + KV+RVLP WLA P IV+V+ Q+ + D+PGLD++ R L + IT FFPVQ QVIP LL + + P D+CVSAPTGSGKTLAFV+PIVQA+ R V RALVVLPVQ+LA QV +VF +T T+L+V L+T Q F +EQQ LV P + DI++TTPGRLVDHL T LR+LVIDEADR++E I ++WL L + P +P +T+ATL + P QKLLFSATL+Q+PE+LQ L LF+P+LFTSVV E+ G +G +FVG++TTPAEL E + +V P KP+ L H++ + +VF + + AH L+ LL + +V E+SS S R ++L + +GKI++LVS+DA+ARGMDI VD V+ Y APK IK YIHRVGRT RAG G ++T ++ + +L A+K + + ++ L+ ED Y A E L+ E+ Q K R+K Sbjct: 75 DEEGATNRKRQSDTVSQHGNANFENEAVEASAAQKKKKKKHKRKWKEINGSEGGEANAGEKKEMKTLEKIE-GFTVIGTENFKKKQKVKRVLPYWLANPSIVSVNLQQLTTTVKDIPGLDKNIIRALKRNKITHFFPVQAQVIPWLLAAYKRPTRYWPHDICVSAPTGSGKTLAFVIPIVQALCYRFVQQVRALVVLPVQDLAVQVYRVFLTYTQHTDLKVALVTGQTSFHKEQQQLVALSPVTGYHSLVDIVVTTPGRLVDHLQSTSGFTLKHLRFLVIDEADRIIENIQNNWLYHLYSHISAGNAPTCHPPALTIATLESTSSPPPQKLLFSATLTQDPEKLQQLGLFQPKLFTSVVGDDQLENGDIGKDEAVRG-DFVGKFTTPAELSEYVCLVT-PESKPLALYHIIASNSWQHVLVFVGSRKDAHRLSLLLSYLGQKSFKVAEISSSLSRPAREKVLAKFAAGKIDVLVSSDALARGMDIEGVDYVILYSAPKSIKNYIHRVGRTGRAGKPGTSVTFLQDSQVA-SFNEMLHSASKGDLQKMDIQQSKLEELEDAYTLALEHLKGHLEREEKQQLKAKKRRKK 658
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1205908075|gb|OWF54509.1| (ATP-dependent RNA helicase DDX51 [Mizuhopecten yessoensis]) HSP 1 Score: 397.897 bits (1021), Expect = 5.766e-127 Identity = 234/507 (46.15%), Postives = 306/507 (60.36%), Query Frame = 0 Query: 81 AEAGFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPE------SGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQPVQ-MADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEG---RLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQG---------FEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLR-VGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALD--EDEYKRASEKAAEVLK 564 E F VLG KV RVLP WLA P+++T D + L + M GLD D L + I+ FFPVQ QVIP LL G+ + P D+CVSAPTGSGKTLAFV+PI+QA+K RV ALVVLPV++LA QV +VF + G++L+V LLT Q+ F+ EQQ LVRR + Q + DI+I TPGRLVDH+ T D + LR+LVIDEAD++ME + DWL +E + RP +T + IPLQKLLFSATLSQNPE LQ LNLF P+LFTS+V+ P+S A G EFVG+YTTP L E V KP+I+ H L + F N++E AH L L++ + V E SS +++R RIL + G+I+I++ TDAMARGMDI +V V+SYD IKTYIHRVGRTARAG G A+TL++ K + + +EA K + V E +L+ +K+A E+ ++LK Sbjct: 154 GEKKFPVLGNFQQKVVQKVNRVLPDWLANPNVITADLKSTTLPVGKMTGLDPDLVVQLQENNISHFFPVQMQVIPMLLDTLSVGGMVGKAGYWPSDICVSAPTGSGKTLAFVLPIIQALKGRVHRQVCALVVLPVKDLAVQVFKVFQTYIKGSDLKVGLLTGQKAFKLEQQTLVRRSLRGYQSLVDIIIATPGRLVDHINQTPGFDLSGLRFLVIDEADKMMELVKQDWLVRVENAVYKSTRPQPEILTAQSCLKPRIPLQKLLFSATLSQNPENLQQLNLFLPKLFTSLVK-PASSVCEDATGQSADTEENQGEFVGKYTTPQGLSEYFVECT-AATKPLIILHYLHNLMFTNVLCFVNSVESAHRLYHLIRLMGGKEVREFSSGLQTNRRKRILKEFSKGQIDIIICTDAMARGMDIDNVKFVISYDQTHNIKTYIHRVGRTARAGKVGTAITLLQ-NKEFYHFKKMTREAGKSRIKEQKVSEESLEPIVPAFKKALEEVPQILK 657
BLAST of dead box atp-dependent rna vs. nr
Match: gi|242019954|ref|XP_002430423.1| (DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus corporis] >gi|212515553|gb|EEB17685.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus corporis]) HSP 1 Score: 392.119 bits (1006), Expect = 7.764e-127 Identity = 219/497 (44.06%), Postives = 301/497 (60.56%), Query Frame = 0 Query: 98 KVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLL-PESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQP--QPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMTVATLRAAPI-----PLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY---DLRVGEMSSQ-NSDKRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDEDE--YKRASEKAAEVLKEEKAQNPARGKFRRKV 580 KV+R LP WL+ P +V+VD + I + GLD+ L GIT FFPVQ QVIP +L E L P D+CVSAPTGSGKTLAFV+PI+Q + +R++P RALVVLPVQ+LA QV +VF + T+L+V LLTP+R F EQ L + + DI++TTPGRLV+HL T+ L++++L+YLVIDEADRVME + +DWL L + + I P KLLFSATLSQ+PE+LQ L LF PRLFTSVVES S +F+G+YTTPAEL+E V + KP++L HLL ++ + F N+ LA +L++ V ++S+ KR RIL ++GK++IL+S+DA+ARG+DI +V VVSYD PKF+KTY+HR+GRT RAG GH+L + K ++ A K SV + L++ E YK+A L+++K++ + K +KV Sbjct: 6 KVKRKLPDWLSNPSVVSVDLKNLNYTIDSISGLDKIFIDKLRANGITHFFPVQHQVIPCVLENERKPYLLWPNDICVSAPTGSGKTLAFVLPILQVLYKRIIPKIRALVVLPVQDLANQVFKVFETYAEPTDLKVLLLTPKRSFTAEQNLLYKFDDLGNYHSLTDIIVTTPGRLVEHLTKTNELNFSELKYLVIDEADRVMENVQNDWLYHLNKYINSECCKSYQAPIVSYNNILNQKRPPNKLLFSATLSQDPEKLQALGLFHPRLFTSVVESGKSTEKNNNDESKFIGKYTTPAELKEYYTVCSK-VNKPLLLHHLLISKSWKNILCFVNSSAATFKLAFILKKLCKKKYTVQQLSANIVQSKRNRILQNFENGKVDILISSDALARGIDIPNVKYVVSYDCPKFVKTYVHRIGRTGRAGKEGHSLAFL-TSKEVTSFNKMVSAAGKNSVDVFNFEVEELEQYEVTYKKALLLLGNYLEKQKSKIIKKTKANKKV 500
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1285027327|ref|XP_023025923.1| (probable ATP-dependent RNA helicase Dbp73D [Leptinotarsa decemlineata]) HSP 1 Score: 394.045 bits (1011), Expect = 4.546e-126 Identity = 217/497 (43.66%), Postives = 314/497 (63.18%), Query Frame = 0 Query: 84 GFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLPE-SGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLV--RRQPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRLQRPAAYPMT-----VATLRAAPIPLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVESPSSGPAALAQGFE-FVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY---DLRVGEMSSQNSDK-RGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDEDEYKRASEKAAEVLKEEK 567 GFT+LG D A ++KV+R+LP WLA P +++V+ Q Q ++D+ LD+ R+ L G+ FFPVQ +VIP LL + PRD+CVSAPTGSGKTLAF +P++QA+K+ V RALV+LP Q+LA QV + F ++ T++ + L+T F EQ L+ + + ADIL+ T GRLVDHL T A L +++IDEADRV+E + +DWL LE + + + T ++TL+ P P QKLLFSATLSQ+PE+LQ L+LF+P+LFTSVVE+ + + F+G+YTTP+EL E + L KP+ L ++ + K++VFT++++ AH LA LL+ DL+V E SS K R +++ + SGKI+ILV TDA+ARG+D+ V V+SY AP+++KTYIHR GRTARAG G A+TL+ + K + +L +ANK + ++E + ED+ + EK E L+E K Sbjct: 119 GFTILGADSFARKSKVKRILPNWLANPTVISVNLQNLQTKVSDIKLLDKGIRKLLKANGVEYFFPVQAEVIPWLLTSIKNTDVMFPRDICVSAPTGSGKTLAFALPVIQALKKYTVKKIRALVILPTQDLALQVFKTFKIYSQNTSIDICLVTGSNSFAVEQSQLISDNKAFGSLTKADILVCTAGRLVDHLKLTKGFSLANLEFIIIDEADRVLENVQNDWLYHLEKHIHQEESNSQTGRLLNLSTLQ-KPRPPQKLLFSATLSQDPEKLQKLSLFQPKLFTSVVENVEDSISTDKPSMDTFIGKYTTPSELTEKYIATSLEL-KPLFLYKFIKLEKLTKSLVFTHSVDSAHRLAILLRALFGNDLKVEETSSNLQGKSRKQLIEKFCSGKIDILVCTDALARGIDLPGVQCVISYSAPRYLKTYIHRAGRTARAGEPGLAVTLLNKTQIS-KFKGMLSQANKSN-----IEELTIPEDDLEPLGEKYKESLQELK 607
BLAST of dead box atp-dependent rna vs. nr
Match: gi|1228018677|ref|XP_021941329.1| (ATP-dependent RNA helicase DDX51 [Zootermopsis nevadensis] >gi|646689327|gb|KDR06549.1| ATP-dependent RNA helicase DDX51 [Zootermopsis nevadensis]) HSP 1 Score: 390.963 bits (1003), Expect = 2.510e-124 Identity = 237/504 (47.02%), Postives = 317/504 (62.90%), Query Frame = 0 Query: 84 GFTVLGQDLNASQTKVQRVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQRQVIPHLLP-ESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPGPRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRRQPQP--VQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHHDWLGLLEGRL---QRPAAYP--MTVATLRAAPI-PLQKLLFSATLSQNPEQLQTLNLFEPRLFTSVVES---PSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKKPMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEY---DLRVGEMSSQNSD-KRGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRVGRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALD--EDEYKRASEKAAEVLKEEKAQ 569 GFTV+G D + KV+RVLP WLA P +V+V+ Q+ + D+PGLD D L + IT FFPVQ QVIP LL S Q + P DVCVSAPTGSGKTL FV+PIVQA++ RVV RALVVLPVQ+LA QV VF +T T+L+V L+T Q F +EQQ LV + DI++TTPGRLVDHL T LR+LVIDEADRV+E + +DWL L + + +P +TVATL + P QKLLFSATL+Q+PE+LQ L LF+PRLFTSVV + G +G +FVG++TTPAEL E + +V P KP+IL +++ + +VF + + AH L+ LL +V E+SS+ S R ++L + +G I++L+S+DA+ARGMDI V+ VV Y PK +K YIHRVGRT RAG +G A+T + + + +L A K S+ V E+ L+ ED+YK A E+ E L++E+ Q Sbjct: 142 GFTVIGTDKFKKRQKVKRVLPHWLANPSVVSVNLQQLTTTVKDIPGLDRDIVSALKRNKITHFFPVQAQVIPWLLAAHSTQTQYWPHDVCVSAPTGSGKTLTFVIPIVQALRHRVVLQVRALVVLPVQDLAVQVYHVFLTYTQHTDLKVALITGQTSFCKEQQQLVASSAVSGYRSLVDIVVTTPGRLVDHLQSTPGFVLKHLRFLVIDEADRVIENVQNDWLYHLYSHINVGNSSSCHPPALTVATLESTSCPPPQKLLFSATLTQDPEKLQQLGLFQPRLFTSVVGNDQLEDRGKGEAVRG-DFVGKFTTPAELSEYICIVT-PESKPLILHYIITSNSWQHVLVFVGSRKDAHRLSLLLSHLGRNSFKVAEISSRLSRPAREKVLAKFAAGGIDVLISSDALARGMDIEGVEYVVLYSEPKSVKNYIHRVGRTGRAGRSGTAVTFLLDSQVA-QFNEMLGVAGKGSLQKIDVQESQLEELEDKYKAALEQLKENLEKEEKQ 642 The following BLAST results are available for this feature:
BLAST of dead box atp-dependent rna vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of dead box atp-dependent rna vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dead box atp-dependent rna vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold385_size188773:93080..95752- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold385_size188773-snap-gene-0.26 ID=maker-scaffold385_size188773-snap-gene-0.26|Name=dead box atp-dependent rna|organism=Tigriopus kingsejongensis|type=gene|length=2673bp|location=Sequence derived from alignment at scaffold385_size188773:93080..95752- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dead box atp-dependent rna' has the following synonyms
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