hypothetical protein NEMVEDRAFT_v1g45144, maker-scaffold3921_size7129-snap-gene-0.2 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein NEMVEDRAFT_v1g45144
Unique Namemaker-scaffold3921_size7129-snap-gene-0.2
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263116342|gb|PFX13441.1| (putative RNA-directed DNA polymerase from transposon X-element [Stylophora pistillata])

HSP 1 Score: 68.9366 bits (167), Expect = 1.034e-8
Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 
Query:  227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435
            + QGSILGP+ +   +A + D      ++   YADDT ++ AV      L    L+  + +   + T N L  N  KT+++   +  VK+ +      V G  +    K   LGV  D+NF+   H   + + A      I R+  +LP  + L+RL   LVI  + +  + +          +PS     +Q   N  AR IVG RR DH+
Sbjct:  469 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDPLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 671
[Close]
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1338793696|ref|XP_023693973.1| (uncharacterized protein LOC111857394 [Paramormyrops kingsleyae])

HSP 1 Score: 65.855 bits (159), Expect = 1.200e-8
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0 
Query:   10 IFQIGAFCGEQSFLVNILPSQTITPEATEVHGTTSNGTQLFQGEKALELFQSISLKEGLEGFIEFLINVDCTILVAHHYYKFDGRILEPQLSHHKYQYPLGVV--LCDSLTLARNADKARNYDRTSYSLDSLLKEYCPKRQGSNMKAHSAL 158
            I Q+ A CGE++F   +LP  +IT  A+ V G T  G +L Q    +    ++ L++ L  F+ FL  V   +LVAH+   FD  IL   LS+  +   L  +    D+L L+ +      + +  +SL+ L+K++  K    + +AH+AL
Sbjct:   41 ILQLSAVCGERTFNKYVLPRHSITAGASRVTGFTVEGGRLLQHGHPMP---TVPLRQALIDFLTFLRGVQSPVLVAHNALDFDAPILLRTLSNFSFYNKLTFIVGFLDTLRLSYDLPVCSAFKK--FSLEYLVKQFLDK----SYEAHNAL 182
[Close]
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263131614|gb|PFX27831.1| (TCDD-inducible poly [ADP-ribose] polymerase [Stylophora pistillata])

HSP 1 Score: 68.9366 bits (167), Expect = 1.212e-8
Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 
Query:  227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435
            + QGSILGP+ +   +A + D      ++   YADDT ++ AV      L    L+  + +   + T N L  N  KT+++   +  VK+ +      V G  +    K   LGV  D+NF+   H   + + A      I R+  +LP  + L+RL   LVI  + +  + +          +PS     +Q   N  AR IVG RR DH+
Sbjct:  614 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDPLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 816
[Close]
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263137202|gb|PFX33338.1| (RNA-directed DNA polymerase from mobile element jockey [Stylophora pistillata])

HSP 1 Score: 68.5514 bits (166), Expect = 1.465e-8
Identity = 46/153 (30.07%), Postives = 76/153 (49.67%), Query Frame = 0 
Query:  227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIWAVAGDVASLERILNKRVLSFTQYATTNGLILNASKTQ-LVVGGNVRVKDRANLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLR 378
            + QGS+LGP  +   +    D C  SE+    YADDT I A A DV++ E+ +NK + S   +    GLI N  K + L++G    VK+   L + + G+ +  +    +LG+  D   +   H A++      +  L+ R++  L R  +LR
Sbjct:  640 VLQGSVLGPTLFNIHINGFTDTCTDSEV--VLYADDTEIHASAKDVSAAEKRVNKDLESTATWWNQYGLISNHKKCKALLIGSKHAVKNTRALQIILNGKPVEQSDYFKYLGIYLDHFLTCSKHVAYIQSRVYPKLKLLNRISSFLSRDIFLR 790
[Close]
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263130672|gb|PFX26910.1| (MAU2 chromatid cohesion factor-like [Stylophora pistillata])

HSP 1 Score: 68.5514 bits (166), Expect = 1.673e-8
Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 
Query:  227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435
            + QGSILGP+ +   +A + D      ++   YADDT ++ AV      L    L+  + +   + T N L  N  KT+++   +  VK+ +      V G  +    K   LGV  D+NF+   H   + + A      I R+  +LP  + L+RL   LVI  + +  + +          +PS     +Q   N  AR IVG RR DH+
Sbjct:  265 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDTLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 467
The following BLAST results are available for this feature:
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1263116342|gb|PFX13441.1|1.034e-828.30putative RNA-directed DNA polymerase from transpos... [more]
gi|1338793696|ref|XP_023693973.1|1.200e-831.13uncharacterized protein LOC111857394 [Paramormyrop... [more]
gi|1263131614|gb|PFX27831.1|1.212e-828.30TCDD-inducible poly [ADP-ribose] polymerase [Stylo... [more]
gi|1263137202|gb|PFX33338.1|1.465e-830.07RNA-directed DNA polymerase from mobile element jo... [more]
gi|1263130672|gb|PFX26910.1|1.673e-828.30MAU2 chromatid cohesion factor-like [Stylophora pi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold3921_size7129supercontigscaffold3921_size7129:3458..7090 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold3921_size7129-snap-gene-0.2-mRNA-1maker-scaffold3921_size7129-snap-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold3921_size7129:3458..7090+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold3921_size7129-snap-gene-0.2 ID=maker-scaffold3921_size7129-snap-gene-0.2|Name=hypothetical protein NEMVEDRAFT_v1g45144|organism=Tigriopus kingsejongensis|type=gene|length=3633bp|location=Sequence derived from alignment at scaffold3921_size7129:3458..7090+ (Tigriopus kingsejongensis)
GATTGCTATCCCAGCAAGGGGGGCCGGATATCTTTCAAATAGGAGCCTTT
TGTGGAGAGCAATCATTCTTGGTCAACATCCTACCCTCGCAGACCATCAC
TCCTGAGGCCACTGAGGTCCATGGGACCACTTCCAATGGAACCCAATTGT
TCCAAGGAGAGAAAGCCCTTGAGCTTTTTCAATCAATTTCGCTCAAGGAA
GGGCTGGAAGGCTTCATCGAATTTCTCATCAACGTGGACTGTACTATCTT
GGTGGCCCACCATTACTACAAATTCGATGGACGCATTTTGGAGCCCCAAT
TGAGTCACCATAAGTACCAATATCCCCTGGGTGTTGTTCTGTGCGACTCC
TTGACTTTGGCTCGCAATGCGGATAAAGCCAGAAATTACGACCGCACGAG
TTACTCCTTGGATAGTCTGCTTAAAGAATACTGCCCTAAACGTCAAGTGC
CTTATCATGATGCCCCCAAAATGCCTTGTCTTGCATGTTGGTGGTTCTTG
CCATTGCTGGGCAACATGGAATGTTTGAAATGCAAGTTTTGAAACAATAT
GGCAACCCTTAGGACCTACAGTATTTGCCTCCAATTGACCACATCTGTGG
AACGGCTGCATCATTTTTGAGTGACCCTGCATGCTATGGGTCAAAAAGGC
CCTGCAATCTACTTTATGTTATGGCTTTTCAATAAAAATGTGAATGTGAA
AAAGCTCAGGTTCGGAAGAGATGTGTCTTTTTGGATCCAGTTAGGGTACA
AATCAAACTTCACCTTGGATGATGTCTGTTGGGCAATGTGTTTTACAACT
GATGTTCAATTCCAAGTGACCCAGGAGTTCCAGCGTAAATGAACAACTAA
TTTTGTCTTCAGTTAAAATTACCCAACGCTTATGGTATGGTGTTAAAATT
TAGGCCATACAATCCAAGGATATGCCAAATGTCTGTTTTCACAATACCAG
GCCAATCATTTGCACTGTTGCAACCTTGTATTTGCTTTCAAGGCACCCAA
ATACACACCTATGGGAAACATACAAATGAGCAGAATTGTAGGGTACATAC
TGTAGACTACATTTCCTCGTGGTATTCATACCATTTCAAAAAGTGAACGT
TTTTGCCCACCCAGGTATGACGGTGGATTACCTTCTTAACAAGCACAAGA
GCCCTCGTTGGGGATCAATTTGAATCATGATTACACACACAAAAATATGT
TTTGGCCAGGGTCTTTTTTTTGACCTGATTGTTTCCCCAGTCTACTTAAG
TGATAGGGGTCCGGGTAGTTTCCTCCCCACGGAGCGCTTTGAGAGCCTCT
CAAAATGCCTGCTGAACACTTCCGATTGTGGTCCAAACCATGGAGTACTA
GAATCACCTGGAGGTCGCACAGCACGAAAAATGTGTCCAAACCCTTATCT
GCCGCCATGAACTATCTGGGTTGCCTTTCATCGGGACTTTTGTTTTTAAG
CCAGACAGGGCATTGGAACACAGTTCAACTAGGTAGCCTGTTGTAAGTTT
ACTACAGGTTTGTTAATTTCAACCTTACCCTGAACTATTTGAGCTCTGTG
GGCAATTTCTGACCCATGGGCTTAGGTCCGCCATTAATCCATTCTCAGCA
GGATTTAGCCAGATTGTGTGTCCGCACTCAAAAGTTGAGAAGCAGGTAAA
ATCTTGAGGCATGTAAAGATTTACTGCACTCACTAGGATGATACCAAAGG
AAGGGATACTCTCCTCAATTAGGTAATATTTAACAGCATTCATTAGGGTT
GGAGGAACTTGAGCCACGAATGATGTTCCGACTTATGAATATTAGTTAAA
GCCATGTCGTCATTAATGTGTGGGATGGTGGTCATTGCTTACAAAAGCTA
AGACAAATTGAGCCCCGAGTAGGTAAGAACTTAACCCGATTAGAGCTTGT
CCAATCAGAATGAGTGCTGTGCAATGCAATCCGGATTGGCCAAGGCTGGC
CTATATAGCTCTACAAGTCCACAAGGTTCACCATTGATCTGAACAGTTAT
TGGTCGTCAATCAGGGAAGCAACATGAAGGCCCATTCTGCACTCCTCGTC
TTGGCTTTGGCCACTTCCATCTTGAGCATCCAGGGCAAGACCAAGCAAGA
TCCTTGGTGGAAATACGATCCATACATGAGATTCGGCATCGATTCTCCCT
CGGTTCATTGCTCCTCTCCCATGGGTTGCTCTTTAGGCAATGGCGATTCT
GCAGCTCTGTTCAAGCGCAGGTAAGCATTCGATTGTGCCCAATTTTCGCC
CCTCATGTTCATTTCTGGGTTTAGTTCGCAACCTTCCGTGAAACTTGTGG
ATCAACAGGCCAAGAGAGACGAATTCTATCGCATCACGAAGCGCTTTCCT
GGATACTATGATCCTGACAATCGAGTGCACCGAGAATCAGGCCCCGAATA
CCTGTGGATTTAAGTCAGTAGGTCGGGTCTCCAAAATGAAATTTATTTCC
AAGATGAATTTGTTGTTTCATGATCAAGCTCAATAAAATCACTCCCTTCT
CTGGCCTAGGTATTTGCCAATGTGTTTCTCGTTCATTCATTCAGATTGTT
CAGATGCCTCCAGTGATAGATAGACGAATCAAGCGCGACGTAAAGCGTTG
CTTTTCCTGATACCTTTGATGCACCCGCGCCAACGTCAGCCCCTGGAAGA
TAGTGTGAAGAAACTGATGATACGAGTAAAAAATATTTTGTTTCAGGAGG
TAAAATCATGTTCATGTTTTCGATTTGAACCTCAAGCAGGATCTTCACTC
AGATACGTTTACTTTATTTAATTGCCACTGAATTGAGGATTTCTCATGTA
AGTGGCGGTTTTGATTTTAGTCAAGAGACTCTGGGTAAAGGTCACAAATG
GTTGGGCAGTAATGGCCTCGGTGCTGCTTAATATAAAACGAGGTCTGGGA
ATCAGTGCATCCGACCCCTTTCCCGAACGCAATCGAACTCCCCAACCTGG
TTTAATATCAGATTTTACCCAAATTCAGGCAGAAATATCACACCGGATCG
GTCCGGATCACACAAGGATCGATTTTGGGCCCCATCCATTACCTGGCTCT
GGTGGCAGACATGCCTGATTGGTGTGGTGTTAGCGAAATGGAAAATTGTT
GCTATGCCGATGACACCTCCATCTGGGCAGTCGCTGGAGACGTGGCCTCT
CTGGAACGTATCCTGAACAAACGAGTGCTTTCGTTCACCCAATATGCCAC
AACGAATGGCCTGATCCTCAATGCGTCGAAAACCCAACTGGTGGTTGGCG
GGAACGTCAGGGTGAAAGATCGTGCCAATCTCTCTGTTGAGGTCGTTGGT
GAGATAATTCGACCAGCCAAGAAGATGGCATTCCTAGGGGTCACATTTGA
TTCGAATTTCTCGACGTTGCCACACGACGCACATGTGGCTGAGGCTGCAC
GACAACGCGCTGGACTTATTGCCCGCCTGGCGCACCACCTGCCACGTGGG
GAATACTTGCGTCGTTTGGCGGCAGGACTGGTCATTGGCAAGGTTGGATT
TGCCATGGCAGCCGTTGTACCACCTCGTCTACCGAATGACAATGCTATCC
CCTCCAAAGCTCACAAAGCCGTTCAGGTAGCCATCAATGATGTGGCAAGG
ACCATTGTCGGCAAGCGAAGGGAAGATCACATC
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Synonyms
The feature 'hypothetical protein NEMVEDRAFT_v1g45144' has the following synonyms
Synonym
Tk12647
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