hypothetical protein NEMVEDRAFT_v1g45144, maker-scaffold3921_size7129-snap-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263116342|gb|PFX13441.1| (putative RNA-directed DNA polymerase from transposon X-element [Stylophora pistillata]) HSP 1 Score: 68.9366 bits (167), Expect = 1.034e-8 Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 Query: 227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435 + QGSILGP+ + +A + D ++ YADDT ++ AV L L+ + + + T N L N KT+++ + VK+ + V G + K LGV D+NF+ H + + A I R+ +LP + L+RL LVI + + + + +PS +Q N AR IVG RR DH+ Sbjct: 469 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDPLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 671
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1338793696|ref|XP_023693973.1| (uncharacterized protein LOC111857394 [Paramormyrops kingsleyae]) HSP 1 Score: 65.855 bits (159), Expect = 1.200e-8 Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0 Query: 10 IFQIGAFCGEQSFLVNILPSQTITPEATEVHGTTSNGTQLFQGEKALELFQSISLKEGLEGFIEFLINVDCTILVAHHYYKFDGRILEPQLSHHKYQYPLGVV--LCDSLTLARNADKARNYDRTSYSLDSLLKEYCPKRQGSNMKAHSAL 158 I Q+ A CGE++F +LP +IT A+ V G T G +L Q + ++ L++ L F+ FL V +LVAH+ FD IL LS+ + L + D+L L+ + + + +SL+ L+K++ K + +AH+AL Sbjct: 41 ILQLSAVCGERTFNKYVLPRHSITAGASRVTGFTVEGGRLLQHGHPMP---TVPLRQALIDFLTFLRGVQSPVLVAHNALDFDAPILLRTLSNFSFYNKLTFIVGFLDTLRLSYDLPVCSAFKK--FSLEYLVKQFLDK----SYEAHNAL 182
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263131614|gb|PFX27831.1| (TCDD-inducible poly [ADP-ribose] polymerase [Stylophora pistillata]) HSP 1 Score: 68.9366 bits (167), Expect = 1.212e-8 Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 Query: 227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435 + QGSILGP+ + +A + D ++ YADDT ++ AV L L+ + + + T N L N KT+++ + VK+ + V G + K LGV D+NF+ H + + A I R+ +LP + L+RL LVI + + + + +PS +Q N AR IVG RR DH+ Sbjct: 614 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDPLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 816
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263137202|gb|PFX33338.1| (RNA-directed DNA polymerase from mobile element jockey [Stylophora pistillata]) HSP 1 Score: 68.5514 bits (166), Expect = 1.465e-8 Identity = 46/153 (30.07%), Postives = 76/153 (49.67%), Query Frame = 0 Query: 227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIWAVAGDVASLERILNKRVLSFTQYATTNGLILNASKTQ-LVVGGNVRVKDRANLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLR 378 + QGS+LGP + + D C SE+ YADDT I A A DV++ E+ +NK + S + GLI N K + L++G VK+ L + + G+ + + +LG+ D + H A++ + L+ R++ L R +LR Sbjct: 640 VLQGSVLGPTLFNIHINGFTDTCTDSEV--VLYADDTEIHASAKDVSAAEKRVNKDLESTATWWNQYGLISNHKKCKALLIGSKHAVKNTRALQIILNGKPVEQSDYFKYLGIYLDHFLTCSKHVAYIQSRVYPKLKLLNRISSFLSRDIFLR 790
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Match: gi|1263130672|gb|PFX26910.1| (MAU2 chromatid cohesion factor-like [Stylophora pistillata]) HSP 1 Score: 68.5514 bits (166), Expect = 1.673e-8 Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 0 Query: 227 ITQGSILGPIHYLALVADMPDWCGVSEMENCCYADDTSIW-AVAGDVASLE-RILNKRVLSFTQYATTNGLILNASKTQLVVGGNVRVKDRA-NLSVEVVGEIIRPAKKMAFLGVTFDSNFSTLPHDAHVAEAARQRAGLIARLAHHLPRGEYLRRLAAGLVIGKVGFAMAAVVPPRLPNDNAIPSKAHKAVQVAINDVARTIVGKRREDHI 435 + QGSILGP+ + +A + D ++ YADDT ++ AV L L+ + + + T N L N KT+++ + VK+ + V G + K LGV D+NF+ H + + A I R+ +LP + L+RL LVI + + + + +PS +Q N AR IVG RR DH+ Sbjct: 265 VPQGSILGPLLFTLYIAPLQDVIATFNLQCMFYADDTQLYIAVKPSTPELAIESLSTCIKAVFDWNTCNKLQTNRGKTEVLRLTSRFVKNPSLGPQFMVAGVPVNITSKTRNLGVIMDANFTLSSHINDLCKKAFFFINSIGRIRKYLP-PDTLKRLVNALVISHLDYCNSLLY--------GLPSYELSKLQRVQNTAARLIVGARRSDHM 467 The following BLAST results are available for this feature:
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein NEMVEDRAFT_v1g45144 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold3921_size7129:3458..7090+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold3921_size7129-snap-gene-0.2 ID=maker-scaffold3921_size7129-snap-gene-0.2|Name=hypothetical protein NEMVEDRAFT_v1g45144|organism=Tigriopus kingsejongensis|type=gene|length=3633bp|location=Sequence derived from alignment at scaffold3921_size7129:3458..7090+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein NEMVEDRAFT_v1g45144' has the following synonyms
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