glycine receptor subunit alpha-2, maker-scaffold394_size185225-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 112.849 bits (281), Expect = 1.764e-27 Identity = 72/284 (25.35%), Postives = 144/284 (50.70%), Query Frame = 0 Query: 45 LMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVN--PNITLDQF-------QAEIVFE-----SSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAM-FSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVS 313 +++N+ IN ++ V+EK Q ++++ R WVD R+ + + +N + + W PD + K + + + LRI PDG + +S R+ C M+ +++P D Q C + S+G+T+D++ + W +A ++ T+ QF QAE + + D A + R+ + L+Q Y P F+ V+ +W++ +I P RVS+ + + L++ + F+G + P V Y + LDI++I+C + +F+ L+E+++++ Sbjct: 510 VIMNLLIN--SMGPVDEKSQSYLVDAYFRQAWVDQRLSFNATSSVTELPLNWQI-LNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIAS------INFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKTDAPSRVSLGVASSLSVTKIGFAG--KGKPNVEYPTALDIFIIICFMTVFLSLVEYALIN 782
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 107.457 bits (267), Expect = 5.529e-26 Identity = 73/307 (23.78%), Postives = 150/307 (48.86%), Query Frame = 0 Query: 23 DEVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYS-----------TDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFI----NPEAIPGRVSMVMMTMLTLMAM-FSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVS 313 D +LV + YD + + P + + + +++++ ++ V+E ++ R WVD R+ +G + +++N + W+PD F+ K + + +R+ P GK+ YS R+ C M+ +++P D QIC +K SFG ++ + ++W + + L QF ++ SSY+ +Y S ++ R+ Y L+Q Y P L V +W++ ++ P R + ++L+++ + F+G ++ PKV Y + LD+++I+C +F L+EF+ ++ Sbjct: 73 DHLLVYSFYDKR-IRPKLGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERLKYNT-SGVEVLALNWAF-LAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKPKAVSFNKLGLAQFH--LINYSSYNIIEPSLRLTEKGNYRNDS--SSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSIVNIGFTG--KDRPKVGYATALDVFIILCFFTVFAALVEFACIN 370
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000010518 (supercontig:LSalAtl2s:LSalAtl2s69:18020:76641:-1 gene:EMLSAG00000010518 transcript:EMLSAT00000010518 description:"maker-LSalAtl2s69-snap-gene-1.19") HSP 1 Score: 105.145 bits (261), Expect = 3.547e-25 Identity = 76/337 (22.55%), Postives = 156/337 (46.29%), Query Frame = 0 Query: 34 QSLPPTMDNG--------ALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILR--------TGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNP--NITLDQ--FQAEIVFE----SSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNT--PKVSYISFLDIWMIMCVLFIFMVLIEFSIV--------SALIRRGKRNIADIIEKVGLVLIP 336 + PP + NG L + + ++R I EV++K Q + + + W +PR+ + TG + ++ FW PD+ + ++ + V + LR+ + + Y+S +N ++C M F YP D+ C ++ S+ +T + + D++ +P N Q Q I F+ + + +Y +I RK + Q Y+P LFV ++W+S + PE +PGR+ M++ L L+ +F+ VR + P S ++ +D ++++C+ +F+ L E++ + L R+ ++++ + + V +P Sbjct: 42 KEKPPFVGNGRSRFGTHNKLKLIFNFDVREISEVDDKSQTLSIPMYFSVAWKEPRLWINETDPAWNESITGPTNQVNENPLLMDEFWTPDLEIYGLEDFGAKRVLKSMSGLRVGKNKVIEYNSMVNVKISCRMLFDNYPFDKHKCYLQVGSYYYTEETVT----CDSTFTDPLGNEPSRQRNLQYFIKFQDLPPEEKKMELLSGNYSACGFQITFERKRLQLIYQIYLPCILFVAVSWVSFLVRPECVPGRMGMLITLFLVLVNIFNTVRSSAPVPASSRLNAIDSYLVVCICMVFLALFEYAFLLFIIKSRDQKLARKKRKSVVSNLSRSTAVYVP 374
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000009827 (supercontig:LSalAtl2s:LSalAtl2s639:754218:772660:1 gene:EMLSAG00000009827 transcript:EMLSAT00000009827 description:"maker-LSalAtl2s639-augustus-gene-6.12") HSP 1 Score: 100.138 bits (248), Expect = 6.050e-25 Identity = 48/134 (35.82%), Postives = 88/134 (65.67%), Query Frame = 0 Query: 189 PNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRN 322 P T++Q + + ESS +Y ++ + +LSR + +H++Q+Y+P+ L V+I+W+S +++ +++PGR ++ + T+LT+ + +G+ TP+VSY+ +D+WM C FIF LIEF+I++ L RR K N Sbjct: 2 PQFTVEQVETDNCEESSLIGNYSC-----LVAKFHLSRSLGFHMVQSYVPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLTVSSKSAGLNAETPQVSYVKAIDVWMGACTAFIFAALIEFTIINYLWRRTKIN 130
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000008455 (supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1 gene:EMLSAG00000008455 transcript:EMLSAT00000008455 description:"snap_masked-LSalAtl2s519-processed-gene-1.11") HSP 1 Score: 92.8189 bits (229), Expect = 1.891e-21 Identity = 58/271 (21.40%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 55 NIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASN-VNPNITLD-QFQAEIVFESSYSTDY-YAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRN 322 +++ V++K V L + W + R+ + ++ I+ + + W+P++FV + + + + A L + + Y+ + C M F ++P+D+ C+ S + ++ F +++ + + ++ N LD + Q + + + +Y +Y + L+R + +L Y+PS LFV ++W+S I P+ +PGR+++++ L L+ +F+ + +P V + + WMI C+ F+F L+ ++ + ++ K+N Sbjct: 7 DVLRVDDKKFSVTLNMYFGVRWTENRLTKMTPGTSSWIPIDMDF-MNYLWVPNVFVYNLVSFHALDCLKKLAGLWVAEGKDLFYNQATHVTFMCPMRFNKFPLDQHSCKFLVGSTNYDMTRMLFDYNTLSYDPLSGNTILDYRIQIKPLKTADRIINYGETGNYSLTGFEMTLTRNMAKYLYIYYLPSGLFVGVSWVSFLIPPDVVPGRMALLVTLFLVLINIFNTITNVSPNVEGMXAISSWMIACMFFVFGALLGYAAILYVLLMKKKN 276
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 172.555 bits (436), Expect = 1.636e-48 Identity = 98/295 (33.22%), Postives = 161/295 (54.58%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + + +I + + V E + LR W D R+ D + ++ +++ W PD+F K V LRI +GK+ YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W SD V +TL QF + E Y T +Y + + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 172.17 bits (435), Expect = 1.836e-48 Identity = 98/295 (33.22%), Postives = 161/295 (54.58%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + + +I + + V E + LR W D R+ D + ++ +++ W PD+F K V LRI +GK+ YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W SD V +TL QF + E Y T +Y + + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 171.785 bits (434), Expect = 2.527e-48 Identity = 98/295 (33.22%), Postives = 159/295 (53.90%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + + +I + + + E + LR W DPR+ D + ++ +++ W PD+F K V LRI +G + YS RI +AC MD + +P+D Q C ++ ESFG+T + + F WD + V +TL QF + + Y T +Y + + R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 46 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKE 337
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 171.785 bits (434), Expect = 3.459e-48 Identity = 97/296 (32.77%), Postives = 160/296 (54.05%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW--DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + + +I + + V E + LR W DPR+ D + ++ +++ W PD+F K V LRI +G + YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W D+ A V +TL QF + Y T +Y + + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRL-AYREYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 169.859 bits (429), Expect = 1.817e-47 Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320 +GYDA+ + P + + +I + + + E + LR W DPR+ D + ++ +++ W PD+F K V LRI +G + YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W +A V +TL QF + + Y T +Y + + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 169.859 bits (429), Expect = 2.262e-47 Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320 +GYDA+ + P + + +I + + + E + LR W DPR+ D + ++ +++ W PD+F K V LRI +G + YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W +A V +TL QF + + Y T +Y + + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 169.474 bits (428), Expect = 2.590e-47 Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320 +GYDA+ + P + + +I + + + E + LR W DPR+ D + ++ +++ W PD+F K V LRI +G + YS R+ ++C MD + +P+D Q C ++ ESFG+T + + F W +A V +TL QF + + Y T +Y + + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 169.088 bits (427), Expect = 3.329e-47 Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + ++ +I + + + E + LR W DPR+ D + ++ +++ W PD+F K + LRI +G + YS RI +AC MD + +P+D Q C ++ ESFG+T + + F W + A V +TL QF + + Y T +Y + + R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 50 SGYDAR-IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYNEYPDDSLDLDPSM-LDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKE 341
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 169.088 bits (427), Expect = 3.364e-47 Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + ++ +I + + + E + LR W DPR+ D + ++ +++ W PD+F K + LRI +G + YS RI +AC MD + +P+D Q C ++ ESFG+T + + F W + A V +TL QF + + Y T +Y + + R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 50 SGYDAR-IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYNEYPDDSLDLDPSM-LDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKE 341
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 169.088 bits (427), Expect = 3.459e-47 Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0 Query: 29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321 +GYDA+ + P + + +I + + V E + LR W D R+ D + ++ +++ W PD+F K V LRI +GK+ YS R+ ++C MD + +P+D Q C ++ ESF +T + + F W SD V +TL QF + E Y T +Y + + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+ SG R + PKVSY+ +DIWM +C+LF+F L+E++ V+ + R+ K Sbjct: 56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268048|ref|XP_023344165.1| (glycine receptor subunit alpha-4-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 350.517 bits (898), Expect = 2.887e-116 Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347 V Y+ P G L I SINLRNI++V+EK Q V LE++LR+ W DPR+ + F S+ + + W+PDIF+DQ K LR+P+ I+PA+LR++ D +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG S+QIQ W ++ +VN NITL QF + SYSTDYY SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI E++PGRV M M TMLTL AMFS RQN PKVSYIS LDIWM++C++F+F + EF++V L+R+GK+ ++ + V ++P L+ NL YW Sbjct: 28 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 351
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268046|ref|XP_023344159.1| (glycine receptor subunit alpha-4-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 350.517 bits (898), Expect = 3.891e-116 Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347 V Y+ P G L I SINLRNI++V+EK Q V LE++LR+ W DPR+ + F S+ + + W+PDIF+DQ K LR+P+ I+PA+LR++ D +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG S+QIQ W ++ +VN NITL QF + SYSTDYY SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI E++PGRV M M TMLTL AMFS RQN PKVSYIS LDIWM++C++F+F + EF++V L+R+GK+ ++ + V ++P L+ NL YW Sbjct: 37 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 360
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268044|ref|XP_023344150.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 350.132 bits (897), Expect = 6.724e-116 Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347 V Y+ P G L I SINLRNI++V+EK Q V LE++LR+ W DPR+ + F S+ + + W+PDIF+DQ K LR+P+ I+PA+LR++ D +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG S+QIQ W ++ +VN NITL QF + SYSTDYY SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI E++PGRV M M TMLTL AMFS RQN PKVSYIS LDIWM++C++F+F + EF++V L+R+GK+ ++ + V ++P L+ NL YW Sbjct: 44 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 367
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268042|ref|XP_023344143.1| (glycine receptor subunit alpha-4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 350.132 bits (897), Expect = 1.148e-115 Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347 V Y+ P G L I SINLRNI++V+EK Q V LE++LR+ W DPR+ + F S+ + + W+PDIF+DQ K LR+P+ I+PA+LR++ D +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG S+QIQ W ++ +VN NITL QF + SYSTDYY SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI E++PGRV M M TMLTL AMFS RQN PKVSYIS LDIWM++C++F+F + EF++V L+R+GK+ ++ + V ++P L+ NL YW Sbjct: 53 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 376
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325257282|ref|XP_023323536.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis]) HSP 1 Score: 328.946 bits (842), Expect = 6.130e-108 Identity = 147/329 (44.68%), Postives = 225/329 (68.39%), Query Frame = 0 Query: 24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEA-----FWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347 +++V+ Y+ +P T + L+I+ SIN+RNI+EV+EK Q V +E++LR+ W DPR+ + S + + + W+PDIF+D K +R+PT +PA+LR++ D +RYS+RIN+DVACNMDFR YP D+Q CE+KF+SFG Q+ F W ++ NVN +I L QF I SYSTDYY SYPG+ L+++L+R+I YH++QTYIPS LF+++ W+ LFINP++IPGRV M T+LT +MFS R + PKVSY+++LD+WM+ C+ F+F ++EF + LIR+ + +A ++++ + +P + ++FNLAYW Sbjct: 2 QLIVEDDYNLHEIPRTENQQPLLISASINIRNILEVDEKDQIVSMETTLRLYWKDPRIKPKYEALSSYDSRGNYTNLHSSLANTIWMPDIFLDHAKTIRTPTFFSKPASLRVYNDSTIRYSARINFDVACNMDFRNYPADDQSCELKFQSFGLQRSQVHFTWIPNSINVNEHIYLSQFVFRIHAMDSYSTDYYDISYPGLKLQLHLTREIGYHIVQTYIPSTLFLVLGWMGLFINPDSIPGRVGMGTTTLLTQTSMFSSTRAHVPKVSYVTYLDVWMLFCMFFVFSTMVEFISILILIRQKRFKLAKKVQRLTRLTLPCIFMLFNLAYW 330
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325292244|ref|XP_023330045.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis]) HSP 1 Score: 322.398 bits (825), Expect = 5.664e-105 Identity = 151/306 (49.35%), Postives = 217/306 (70.92%), Query Frame = 0 Query: 32 DAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILR------TGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVG 331 D +PPT D L ++ SIN+RNI++V E V LE++LR++W DPR+ + T ++ ++N + WIPDIFVD K +R+PT ++PA+LR++ D +RYS+RIN+DVACNMDFR YP+D+Q CE+KFESFG S+QI F W D+ NVN NITL QF ++ SY+TDYY YPG+ L+I+L+R+I YHL+QTYIPS +F+++AW+ LFI E IPGRV M M T+LT +MFS RQ+ PKVSYI++LD+WM++C++F+F ++EF +V+ + R+ K+ +A IEK+ Sbjct: 34 DIHEIPPTRDKKPLAVSASINIRNILDVEEVKMLVSLETTLRLLWRDPRIVPKAQYLTSRDTNGNYTNLNPSL-ASSIWIPDIFVDLAKDMRTPTFFMKPASLRVYSDSLIRYSARINFDVACNMDFRYYPVDDQTCEVKFESFGLQSNQIVFNWIPDSMNVNYNITLSQFLFKVRAIDSYATDYYDLKYPGLKLQIHLTRQIGYHLVQTYIPSTVFLVLAWMGLFIPKEIIPGRVGMGMTTILTQTSMFSATRQHVPKVSYITWLDVWMLVCMIFVFSTMVEFIVVTVISRKKKKRLAVRIEKIS 338
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325303461|ref|XP_023333305.1| (glycine receptor subunit alpha-1-like [Eurytemora affinis] >gi|1325303463|ref|XP_023333306.1| glycine receptor subunit alpha-1-like [Eurytemora affinis] >gi|1325303467|ref|XP_023333307.1| glycine receptor subunit alpha-1-like [Eurytemora affinis]) HSP 1 Score: 255.758 bits (652), Expect = 1.001e-78 Identity = 125/335 (37.31%), Postives = 202/335 (60.30%), Query Frame = 0 Query: 24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVI-------LRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIE-KVGLVLIPSLILIFNLAYWFWL 350 ++ +GYD +P D G L + +NLRNIM V+E+ + + LE +LR+ WVD RV + T +V ++ ++ WIPD+F+D VK +R+PT+ I +++R++ + +R++ R N+DV+C MDF +YP+D+Q C I FESF T +++ W +NVN NITLDQF + SY+T+ Y + + G+ +YL R I YHL+QTYIPS L V+++W S+F++ A P RV + M +L+L++MF R P Y+S+LD WM+ C++ +F+ ++E+ I ++ IAD + V P ++++FNL YW L Sbjct: 39 KLFKSSGYDRSRMPHDAD-GLLRVEAELNLRNIMRVDEREKMISLEVTLRLFWVDKRVHLNPAIPLENCDTDGSYVVLHPST-ADSLWIPDLFIDMVKEIRTPTIRIPTSSVRLYNNSLIRFAKRFNFDVSCQMDFHKYPVDKQTCVIHFESFSLTDKELKLSWRPTGNNVN-NITLDQFTHSVNIRESYTTNSYRQKFAGLQFTLYLRRNIYYHLVQTYIPSLLLVLLSWGSMFVHSSA-PARVGIGMTALLSLISMFGHTRSMVPHTCYVSYLDGWMLFCIVLVFLCIMEYIINLCILATYYTRIADRVSWWTRCVGAPVILVVFNLVYWLLL 369
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1228373653|ref|XP_021948014.1| (glutamate-gated chloride channel subunit beta-like [Folsomia candida]) HSP 1 Score: 237.269 bits (604), Expect = 3.769e-70 Identity = 119/317 (37.54%), Postives = 193/317 (60.88%), Query Frame = 0 Query: 24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVIL-RTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNV--------NPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVG 331 E L+ + Y PPT ++ ++ S+ + N+ ++ E + + LE +LR+ W D R+ + R+G F+ +N + +E+ W+PDIF+D VK+++ P + +PA+LR++PD +RYS+RI +AC MDF YP D Q C + +S+ ++S + W + N ++ LD Q +V SS SY G+ I L RK++YHLIQTY+PS LF+I++WLS + PE++PGR+++ M T+LTL AMFS VRQNTP VSY+ LDIWM++C++F+F+ L+E++++ L + + I V Sbjct: 59 ESLIPSNYSIHEPPPTNNSEPTGVDFSVLIMNVRDIKELNEELSLEMNLRIYWKDTRLSHLADRSGDKFIVLN-PKLVESIWMPDIFIDHVKSVQQPALITKPASLRVYPDSSVRYSARITVTMACQMDFHFYPADTQRCNVDMKSYAYSSQIMALDWREGKGALLVDFLELPNFDVALDTTQNFMVNTSS-------GSYSGIRFTILLRRKLSYHLIQTYLPSTLFIIVSWLSFLVPPESVPGRMALCMTTLLTLTAMFSAVRQNTPNVSYVKALDIWMVVCIIFVFLTLVEYTVLLKLRSKKTKPPPKISSTVA 367
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325307059|ref|XP_023335146.1| (gamma-aminobutyric acid receptor subunit beta-3-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 225.328 bits (573), Expect = 3.541e-68 Identity = 109/231 (47.19%), Postives = 158/231 (68.40%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRV---DVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINP 254 ++ GYD S+PP+ G + + SINLRN++ V+E G+ V LE++LRM W D R+ D L + +++ +++ R WIPDIF+DQ +LR P + + P +LRI+ + +RYS+R+NYDVACNMDF YP D Q C IK+ESFG T D++ W D +NVN NI+L QF + S YST YY SYPG+IL++ L RK++YH++QT++PS +F+ IAWL+LF+ P Sbjct: 65 IEDGYDHHSVPPSQ--GPIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDN-RFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQD-NNVNKNISLAQFDVTVELVSEYSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 291
BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325307061|ref|XP_023335147.1| (glutamate-gated chloride channel-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 221.861 bits (564), Expect = 7.699e-67 Identity = 109/231 (47.19%), Postives = 158/231 (68.40%), Query Frame = 0 Query: 27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRV---DVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINP 254 ++ GYD S+PP+ G + + SINLRN++ V+E G+ V LE++LRM W D R+ D L + +++ +++ R WIPDIF+DQ +LR P + + P +LRI+ + +RYS+R+NYDVACNMDF YP D Q C IK+ESFG T D++ W D +NVN NI+L QF + S YST YY SYPG+IL++ L RK++YH++QT++PS +F+ IAWL+LF+ P Sbjct: 65 IEDGYDHHSVPPSQ--GPIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDN-RFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQD-NNVNKNISLAQFDVTVEL-SEYSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 290 The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glycine receptor subunit alpha-2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold394_size185225:38186..44517- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold394_size185225-snap-gene-0.24 ID=maker-scaffold394_size185225-snap-gene-0.24|Name=glycine receptor subunit alpha-2|organism=Tigriopus kingsejongensis|type=gene|length=6332bp|location=Sequence derived from alignment at scaffold394_size185225:38186..44517- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glycine receptor subunit alpha-2' has the following synonyms
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