40s ribosomal protein s18, maker-scaffold397_size184017-snap-gene-0.44 (gene) Tigriopus kingsejongensis

Overview
Name40s ribosomal protein s18
Unique Namemaker-scaffold397_size184017-snap-gene-0.44
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 40s ribosomal protein s18 vs. L. salmonis genes
Match: EMLSAG00000009113 (supercontig:LSalAtl2s:LSalAtl2s574:421290:421810:-1 gene:EMLSAG00000009113 transcript:EMLSAT00000009113 description:"maker-LSalAtl2s574-augustus-gene-4.11")

HSP 1 Score: 279.256 bits (713), Expect = 2.784e-98
Identity = 133/152 (87.50%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+I   FQHILRVLNTNIDG+RNIMFAMTAIKGIGRRYANIVLKKAD+DL+KRAGEL+++E+EKIVTIMQNPRQYKIPDWFLNRQKDIK+GKT+QVM+N LD KLREDLERLKKIRAHRGLRH+WGVRVRGQHTK TGRRGRTVGVSKKK
Sbjct:    1 MSLVISPTFQHILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIMQNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRVRGQHTKXTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. L. salmonis genes
Match: EMLSAG00000000787 (supercontig:LSalAtl2s:LSalAtl2s112:287938:306450:1 gene:EMLSAG00000000787 transcript:EMLSAT00000000787 description:"snap_masked-LSalAtl2s112-processed-gene-3.0")

HSP 1 Score: 55.8398 bits (133), Expect = 2.635e-11
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0 
Query:   64 LKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTK 156
            +KKAD+D  K  GE+ ++E+EK V IMQN R+YK  D F N  K+IK  +   +    LD     D   LKKIR              GQHTK
Sbjct:    9 IKKADIDQSKSVGEVYEDEVEKTVAIMQNLREYKTFDRFKNLHKNIKSRQYESIYP--LD-----DFVSLKKIRC-------------GQHTK 81
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|41018059|sp|Q8ISP0.1|RS18_BRABE (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 277.33 bits (708), Expect = 4.707e-96
Identity = 127/152 (83.55%), Postives = 145/152 (95.39%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILRV+NTNIDG+R IMFA+T+IKG+GRRY+NIV KKAD+DL KRAGEL+DEE+E+++TIMQNPRQYKIPDWFLNRQKD+KDGK +QVMAN LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPEKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|41018060|sp|Q8IT98.1|RS18_ARGIR (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 273.092 bits (697), Expect = 2.163e-94
Identity = 127/152 (83.55%), Postives = 144/152 (94.74%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            MALIIP  FQHILRV+NTNIDGKR IMFAMTAIKG+GRRYAN+V KKADVD+ KRAGEL+++EIE+++TIM NPRQYKIP+WFLNRQKD+KDGK +QVM+N LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTGRRGRTVGV+KKK
Sbjct:    1 MALIIPEKFQHILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVAKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|41018061|sp|Q8JGS9.1|RS18_DANRE (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 272.707 bits (696), Expect = 3.354e-94
Identity = 128/152 (84.21%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILRVLNTNIDG+R I FA+TAIKG+GRRYA++VL+KAD+DL+KRAGELT++E+E++VTIMQNPRQYKIPDWFLNRQKDIKDGK +QV+AN LDNKLREDLERLKKIRAHRGLRHFWG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|41018101|sp|Q90YQ5.1|RS18_ICTPU (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 272.322 bits (695), Expect = 4.713e-94
Identity = 127/152 (83.55%), Postives = 145/152 (95.39%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILRVLNTNIDG+R I FA+TAIKG+GRRYA++VL+KAD+DL KRAGELT++E+E++VTIMQNPRQYKIPDWFLNRQKD+KDGK +QV+AN LDNKLREDLERLKKIRAHRGLRHFWG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|50403620|sp|P62271.3|RS18_RAT (RecName: Full=40S ribosomal protein S18 >gi|50403625|sp|P62269.3|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3; AltName: Full=Small ribosomal subunit protein uS13 >gi|54039371|sp|P62272.3|RS18_PIG RecName: Full=40S ribosomal protein S18 >gi|54039385|sp|P62270.3|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3 >gi|62900940|sp|Q5TJE9.3|RS18_CANFA RecName: Full=40S ribosomal protein S18 >gi|91207636|sp|Q3T0R1.3|RS18_BOVIN RecName: Full=40S ribosomal protein S18 >gi|206558173|sp|A5JST6.1|RS18_CAPHI RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 271.166 bits (692), Expect = 1.540e-93
Identity = 126/152 (82.89%), Postives = 145/152 (95.39%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILRVLNTNIDG+R I FA+TAIKG+GRRYA++VL+KAD+DL KRAGELT++E+E+++TIMQNPRQYKIPDWFLNRQKD+KDGK +QV+AN LDNKLREDLERLKKIRAHRGLRHFWG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|54039447|sp|Q962R1.1|RS18_SPOFR (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 267.7 bits (683), Expect = 3.213e-92
Identity = 124/152 (81.58%), Postives = 142/152 (93.42%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILR++NTNIDGKR +MFAMTAIKG+GRRY+NIVLKKAD+DL KRAGE T+EE+EKIVTIM NPRQYKIPDWFLNRQKDI DGK +Q+ ++ LD+KLREDLERLKKIRAHRG+RH+WG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|730637|sp|P41094.1|RS18_DROME (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 248.44 bits (633), Expect = 1.507e-84
Identity = 116/152 (76.32%), Postives = 138/152 (90.79%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+IP  FQHILR++NTNIDGKR +  AMTAIKG+GRRY+NIVLKKADVDL KRAGE T+EE++K+VTI+ NP QYK+P+WFLNRQKDI DGK  Q+ ++ LD+KLR+DLERLKKIR+HRGLRH+WG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|857338598|sp|P0CT66.1|RS18A_SCHPO (RecName: Full=40S ribosomal protein S18-A >gi|857338602|sp|P0CT67.1|RS18B_SCHPO RecName: Full=40S ribosomal protein S18-B)

HSP 1 Score: 247.669 bits (631), Expect = 3.354e-84
Identity = 115/152 (75.66%), Postives = 136/152 (89.47%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P NFQHILR+LNTN+DGK  +MFAMT IKG+GRRYANIV KKAD+D+ KRAGELT EE+E+IVTI+QNP Q+KIP WFLNRQKDI DGK+ Q++AN +D+KLREDLERLKKI+ HRGLRH   +RVRGQHTKTTGRRG+TVGVSKKK
Sbjct:    1 MSLVVPDNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRVRGQHTKTTGRRGKTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|464707|sp|P34788.1|RS18_ARATH (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 242.662 bits (618), Expect = 2.936e-82
Identity = 114/152 (75.00%), Postives = 136/152 (89.47%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+    FQHILRVLNTN+DGK+ IMFA+T+IKGIGRR ANIV KKADVD++KRAGEL+  EI+ ++TI+ NPRQ+KIPDWFLNRQKD KDGK +QV++N LD KLR+DLERLKKIR HRGLRH+WG+RVRGQHTKTTGRRG+TVGVSKK+
Sbjct:    1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
[Close]
BLAST of 40s ribosomal protein s18 vs. SwissProt
Match: gi|74926730|sp|Q869U7.1|RS18_DICDI (RecName: Full=40S ribosomal protein S18)

HSP 1 Score: 221.476 bits (563), Expect = 6.673e-74
Identity = 98/154 (63.64%), Postives = 128/154 (83.12%), Query Frame = 0 
Query:   18 VTMALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            ++ +L+    FQHI+R+ NTN+DG+R I +A+T +KG+GRR+AN+V KKAD+D  KRAGEL+ +E+E++ TIM +PRQY IP WFLNRQKDIKDGK +  +AN +D K REDLERLKKIRAHRG+RH +G+RVRGQ TKTTGRRGRTVGV+ ++
Sbjct:    1 MSSSLVFQGEFQHIIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRVRGQKTKTTGRRGRTVGVAGRR 154
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|225710398|gb|ACO11045.1| (40S ribosomal protein S18 [Caligus rogercresseyi])

HSP 1 Score: 283.878 bits (725), Expect = 4.918e-96
Identity = 133/152 (87.50%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+I   FQHILRV+NTNIDG RNIMFAMTAIKGIGRRYAN+VLKKAD+DLHKRAGEL+++E+EKI+TIMQNPRQYKIPDWFLNRQKDIK+GKT+QVM+N LDNKLREDLERLKKIRAHRGLRH+WGVRVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVISPTFQHILRVMNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIMQNPRQYKIPDWFLNRQKDIKEGKTSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGVRVRGQHTKTTGRRGRTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|225714468|gb|ACO13080.1| (40S ribosomal protein S18 [Lepeophtheirus salmonis])

HSP 1 Score: 281.182 bits (718), Expect = 4.315e-95
Identity = 134/152 (88.16%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L+I   FQHILRVLNTNIDG+RNIMFAMTAIKGIGRRYANIVLKKAD+DL+KRAGEL+++E+EKIVTIMQNPRQYKIPDWFLNRQKDIK+GKT+QVM+N LD KLREDLERLKKIRAHRGLRH+WGVRVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVISPTFQHILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIMQNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRVRGQHTKTTGRRGRTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|961376168|gb|ALS04828.1| (40S ribosomal protein S18 [Pseudodiaptomus poplesia])

HSP 1 Score: 280.411 bits (716), Expect = 9.097e-95
Identity = 127/152 (83.55%), Postives = 148/152 (97.37%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P NFQHILRV+NTNIDG+ N+MFA+T+IKG+GRRYAN+VLKKAD+ +HKRAGELTDE++EKIVTIMQNPRQYKIPDWFLNRQKDIKDGKT+QVM+N+LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTG +G+TVGVSKKK
Sbjct:    1 MSLVVPTNFQHILRVMNTNIDGRTNVMFALTSIKGVGRRYANLVLKKADIPMHKRAGELTDEDVEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTSQVMSNMLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGHKGKTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|961374746|gb|ALS04117.1| (40S ribosomal protein S18 [Acartia pacifica] >gi|961374748|gb|ALS04118.1| 40S ribosomal protein S18 [Acartia pacifica] >gi|961374750|gb|ALS04119.1| 40S ribosomal protein S18 [Acartia pacifica] >gi|961374754|gb|ALS04121.1| 40S ribosomal protein S18 [Acartia pacifica])

HSP 1 Score: 280.411 bits (716), Expect = 1.004e-94
Identity = 130/152 (85.53%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P NFQHILRVLNTNI+GK N+MFA+TAIKGIGRRYANIVLKKAD+ LHKRAGEL++E++EKIVTIMQNPRQYKIPDWFLNRQ+DIKDGKT QVMAN+LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTG +G+TVGVSKKK
Sbjct:    1 MSLVVPPNFQHILRVLNTNIEGKTNVMFALTAIKGIGRRYANIVLKKADIPLHKRAGELSEEDVEKIVTIMQNPRQYKIPDWFLNRQRDIKDGKTGQVMANVLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGHKGKTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|1242773892|ref|XP_022326506.1| (40S ribosomal protein S18 [Crassostrea virginica])

HSP 1 Score: 279.641 bits (714), Expect = 2.236e-94
Identity = 132/152 (86.84%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            MALI+P  FQHILR+LNTNIDG+R IMFAMTAIKGIGRRYAN+V KKADVD+ KRAGEL++EEI+KIVTIMQNPRQYKIPDWFLNRQKDIKDGK +QVM+N+LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTGRRGRTVGV+KKK
Sbjct:    1 MALILPEKFQHILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVMSNMLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVAKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|961375704|gb|ALS04596.1| (40S ribosomal protein S18 [Pseudodiaptomus poplesia])

HSP 1 Score: 279.256 bits (713), Expect = 2.495e-94
Identity = 127/152 (83.55%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M L++P NFQHILRV+NTNIDG+ N+MFA+T+IKG+GRRYAN+VLKKAD+ +HKRAGELTDE++EKIVTIMQNPRQYKIPDWFLNRQKDIKDGKT+QVM+N+LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTG +G+TVGVSKKK
Sbjct:    1 MPLVVPTNFQHILRVMNTNIDGRTNVMFALTSIKGVGRRYANLVLKKADIPMHKRAGELTDEDVEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTSQVMSNMLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGHKGKTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|961376188|gb|ALS04838.1| (40S ribosomal protein S18 [Pseudodiaptomus poplesia] >gi|961376990|gb|ALS05239.1| 40S ribosomal protein S18 [Tortanus dextrilobatus])

HSP 1 Score: 278.87 bits (712), Expect = 4.366e-94
Identity = 128/152 (84.21%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P NFQHILRVLNTNIDGK N+MFA+T+IKGIGRRYANIVLKKAD+ LHKRAGEL++E+++KI+TIMQNPRQYKIPDWFLNRQ+DIKDGKT+QVMANILDNKLREDLERLKKIRAHRGLRH+WG+R RGQHTKTTG +G+TVGVSKKK
Sbjct:    1 MSLVVPTNFQHILRVLNTNIDGKTNVMFALTSIKGIGRRYANIVLKKADIPLHKRAGELSEEDVDKIITIMQNPRQYKIPDWFLNRQRDIKDGKTSQVMANILDNKLREDLERLKKIRAHRGLRHYWGLRTRGQHTKTTGHKGKTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|765826521|ref|NP_001292296.1| (40S ribosomal protein S18 [Crassostrea gigas] >gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas])

HSP 1 Score: 278.485 bits (711), Expect = 5.497e-94
Identity = 132/152 (86.84%), Postives = 145/152 (95.39%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            MALI+P  FQHILR+LNTNIDG+R IMFAMTAIKGIGRRYAN+V KKADVD+ KRAGEL++EEI+KIVTIMQNPRQYKIPDWFLNRQKDIKDGK +QVM+N LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTGRRGRTVGV+KKK
Sbjct:    1 MALILPEKFQHILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIMQNPRQYKIPDWFLNRQKDIKDGKFSQVMSNTLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVAKKK 152
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BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|188572482|gb|ACD65147.1| (putative 40S ribosomal protein RPS18 [Phoronis muelleri])

HSP 1 Score: 278.485 bits (711), Expect = 5.743e-94
Identity = 129/152 (84.87%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P  FQHILRV+NTNIDGKR IMFAMTAIKGIGRRYA++VLKKADVDL KRAGEL++EE+E+++TIM NPRQYKIPDWFLNRQKD+KDGKT+QVM+N LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct:    1 MSLVVPEKFQHILRVMNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIMSNPRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
[Close]
BLAST of 40s ribosomal protein s18 vs. nr
Match: gi|961374752|gb|ALS04120.1| (40S ribosomal protein S18 [Acartia pacifica])

HSP 1 Score: 278.485 bits (711), Expect = 6.202e-94
Identity = 129/152 (84.87%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   20 MALIIPANFQHILRVLNTNIDGKRNIMFAMTAIKGIGRRYANIVLKKADVDLHKRAGELTDEEIEKIVTIMQNPRQYKIPDWFLNRQKDIKDGKTNQVMANILDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 171
            M+L++P NFQHILRVLNTNI+GK N+MFA+TAIKGIGRRYANIVLKKAD+ LHKRAGEL++E++EKIVTIMQNPRQYKIPDWFLNRQ+DI+DGKT QVMAN+LDNKLREDLERLKKIRAHRGLRH+WG+RVRGQHTKTTG +G TVGVSKKK
Sbjct:    1 MSLVVPPNFQHILRVLNTNIEGKTNVMFALTAIKGIGRRYANIVLKKADIPLHKRAGELSEEDVEKIVTIMQNPRQYKIPDWFLNRQRDIRDGKTGQVMANVLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGHKGETVGVSKKK 152
The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s18 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000091132.784e-9887.50supercontig:LSalAtl2s:LSalAtl2s574:421290:421810:-... [more]
EMLSAG000000007872.635e-1140.86supercontig:LSalAtl2s:LSalAtl2s112:287938:306450:1... [more]
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BLAST of 40s ribosomal protein s18 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|41018059|sp|Q8ISP0.1|RS18_BRABE4.707e-9683.55RecName: Full=40S ribosomal protein S18[more]
gi|41018060|sp|Q8IT98.1|RS18_ARGIR2.163e-9483.55RecName: Full=40S ribosomal protein S18[more]
gi|41018061|sp|Q8JGS9.1|RS18_DANRE3.354e-9484.21RecName: Full=40S ribosomal protein S18[more]
gi|41018101|sp|Q90YQ5.1|RS18_ICTPU4.713e-9483.55RecName: Full=40S ribosomal protein S18[more]
gi|50403620|sp|P62271.3|RS18_RAT1.540e-9382.89RecName: Full=40S ribosomal protein S18 >gi|504036... [more]
gi|54039447|sp|Q962R1.1|RS18_SPOFR3.213e-9281.58RecName: Full=40S ribosomal protein S18[more]
gi|730637|sp|P41094.1|RS18_DROME1.507e-8476.32RecName: Full=40S ribosomal protein S18[more]
gi|857338598|sp|P0CT66.1|RS18A_SCHPO3.354e-8475.66RecName: Full=40S ribosomal protein S18-A >gi|8573... [more]
gi|464707|sp|P34788.1|RS18_ARATH2.936e-8275.00RecName: Full=40S ribosomal protein S18[more]
gi|74926730|sp|Q869U7.1|RS18_DICDI6.673e-7463.64RecName: Full=40S ribosomal protein S18[more]

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BLAST of 40s ribosomal protein s18 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225710398|gb|ACO11045.1|4.918e-9687.5040S ribosomal protein S18 [Caligus rogercresseyi][more]
gi|225714468|gb|ACO13080.1|4.315e-9588.1640S ribosomal protein S18 [Lepeophtheirus salmonis... [more]
gi|961376168|gb|ALS04828.1|9.097e-9583.5540S ribosomal protein S18 [Pseudodiaptomus poplesi... [more]
gi|961374746|gb|ALS04117.1|1.004e-9485.5340S ribosomal protein S18 [Acartia pacifica] >gi|9... [more]
gi|1242773892|ref|XP_022326506.1|2.236e-9486.8440S ribosomal protein S18 [Crassostrea virginica][more]
gi|961375704|gb|ALS04596.1|2.495e-9483.5540S ribosomal protein S18 [Pseudodiaptomus poplesi... [more]
gi|961376188|gb|ALS04838.1|4.366e-9484.2140S ribosomal protein S18 [Pseudodiaptomus poplesi... [more]
gi|765826521|ref|NP_001292296.1|5.497e-9486.8440S ribosomal protein S18 [Crassostrea gigas] >gi|... [more]
gi|188572482|gb|ACD65147.1|5.743e-9484.87putative 40S ribosomal protein RPS18 [Phoronis mue... [more]
gi|961374752|gb|ALS04120.1|6.202e-9484.8740S ribosomal protein S18 [Acartia pacifica][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold397_size184017supercontigscaffold397_size184017:94142..95934 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold397_size184017-snap-gene-0.44-mRNA-1maker-scaffold397_size184017-snap-gene-0.44-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold397_size184017:94142..95934-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold397_size184017-snap-gene-0.44 ID=maker-scaffold397_size184017-snap-gene-0.44|Name=40s ribosomal protein s18|organism=Tigriopus kingsejongensis|type=gene|length=1793bp|location=Sequence derived from alignment at scaffold397_size184017:94142..95934- (Tigriopus kingsejongensis)
GGAATCGGGTGAGAAAAATCGGGAAATAGCCCCGGAATGGCGGGTCCGAC
CGTGGATTGAGCCCGTCTAGGGTTGGGAGAGGCCTTAAAGCATCCAATTG
GGTGGGTGGAACCGTCACTCCGGACCGTCAGCGGTCCGGAGTCGCCTGAA
GTCGAGGACCGTCTGGTATTTTTCTCATCTGTCGTTCGATCGTGCGACGA
TGGGTGATGTAAACGCCAGGCAGAGCAAGATCATCGGCCGCGGATCACTC
CGAAGACGATCTCGAGTGGATCGACTTCACGATCCGCGACCGCCACATTC
GCGCATTCACCGCGCCTCGAACCCCGGTCAGTCCCACGTGACTTCCGGTT
AACCGATGGTCTCTCACTTCCTTGCAGCGCGTTGTCACCATGGCTCTGAT
CATCCCCGCGAACTTCCAACACATCTTGCGTGTGCTCAACACCAACATCG
ATGGCAAGAGGAACATCATGTTCGCCATGACGGCCATCAAGGGTATTGGG
CGGCGTTACGCCAACATCGTCTTGAAGAAGGTAAGTCGTCCCGTGAACGC
GAAATGGAACCAATAGAATCGGATGGAGGGAATCAGGCCTACCATGACCT
ATCGCGTTAATTGTTAATTAAATCCAAGTCGAACACGGATTCCGGGAAGT
GCTAATGGAATAGTAGATGATTACCCGAACGCTGGAGTGAACATATCAGT
TTGTATCCATCGGAGACGGACACCGCTTTTTAGCGTTCAGTTTCTTTCGA
ATAAGGCTGCATGATCTATTGAAAAACCGATGAATTACTGGCATGCTAAA
CCGGGTGAATGTCCTGTCCATGAGCGATGAGTCGAATAAGTACTTCCCGC
CCCCACAATTGTACGGATAATATTTACCCTGTCCGTCAGTCTGGGATTGA
TCCGGGGGTTTATAAGCGTGACCCAGTCCTGTCGGATTTGATGCGGTGGT
TTTGTCTGAGATCAAAATCATGGCATCTAAGGGCCACGAAAAGGCCCACT
AACCGCCAGCCCGACCATCCAGGTGTACCACCACTGTCATGGGAGGCCTG
ATCAGCCACGTGATCGCCATGCTTGGGCTTGAGGGAACATCCTATTCATG
ACCGATTATCTTTGCTTCAGGCCGATGTGGACTTGCACAAGCGTGCCGGT
GAGCTGACCGACGAGGAGATCGAGAAGATCGTGACCATCATGCAAAATCC
CCGTCAATACAAGATCCCCGATTGGTTCCTCAATCGACAGAAGGACATCA
AGGATGGTAAGCGGGCTGCGTGCGTACGTCATTCGGCTAATTGCCGCCCT
GATCCCCGACCTTGTGACATGGTCCCGTGATCCCACCGCGTGGGACGGTT
CCGCTTAATAGCGTGATCATTTGGGTTCATCACTTATGGATCATGCTCTT
CATGATTCCGTGAGCGATGGGCGACGAGGTTTCCGAAGCGCTGAGCACCC
AAGGCATCCATGGCAAGGTGGAAAGCTGTTCCCATAGGGTTAAAACCCTA
CAGCCTCTGTATTATTGAACTGGCTATAATCAAGGCTCTCCGTTTTAGGT
AAGACCAACCAAGTGATGGCCAATATCTTGGACAACAAGCTCCGTGAAGA
CTTGGAGCGTCTGAAGAAGATCCGTGCTCATCGTGGTCTCCGTCACTTTT
GGGGTGTTCGCGTCCGTGGTCAGCATACCAAGACCACCGGTCGCCGTGGC
CGAACCGTGGGTGTGTCCAAGAAGAAGTAAATGTCCATTGTCGTACCATC
TGCTGTGGCCAATATACTACGAGCCTCAATCTGGCAGTCTCAA
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Synonyms
The feature '40s ribosomal protein s18' has the following synonyms
Synonym
Tk01048
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