intraflagellar transport protein 25 homolog, maker-scaffold405_size181423-snap-gene-0.33 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of intraflagellar transport protein 25 homolog vs. L. salmonis genes
Match: EMLSAG00000000065 (supercontig:LSalAtl2s:LSalAtl2s100:464017:469858:-1 gene:EMLSAG00000000065 transcript:EMLSAT00000000065 description:"maker-LSalAtl2s100-snap-gene-4.25") HSP 1 Score: 50.447 bits (119), Expect = 1.653e-7 Identity = 27/108 (25.00%), Postives = 50/108 (46.30%), Query Frame = 0 Query: 23 RTGTKPWISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 ++ KPWISTG++PQ IV+ F + +K Y VKE E S +F ++ + I + + + + + ++ I G+D+ +Y +S+ G Sbjct: 31 KSTNKPWISTGLFPQFIVIQFPDTMTVQSCEIKCYKVKECEFLRSQG--KGQFLSIERKVIDMDPIRTDSPLYLDFKDFEEFDTDSVKFLIHSGYDAVVGVYSISVMG 136
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1020502216|ref|XP_016089937.1| (PREDICTED: intraflagellar transport protein 25 homolog [Sinocyclocheilus grahami]) HSP 1 Score: 65.4698 bits (158), Expect = 4.047e-9 Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 WISTG++PQ ++ F I V + S+N+K + + ++D A +F AV+ F + + N + V+N HLR IL G+D F +++++S++ Sbjct: 76 WISTGMFPQEFIIRFPDNMKISTVSIHSFNIKRLRIEKGTSDDAEQFEAVA----DTEFEHTESSLQANDISVNVLNTTHLRFLILSGYDHFVSVHKVSVQS 173
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|226443133|ref|NP_001140050.1| (intraflagellar transport protein 25 homolog [Salmo salar] >gi|221221500|gb|ACM09411.1| Placental protein 25 [Salmo salar]) HSP 1 Score: 64.3142 bits (155), Expect = 4.383e-9 Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSI 128 W+STG++PQ ++ F+ I +V + YNVK +++ S +D AT+F A+S + + G Q I NG A HLR + G+D F +++++S+ Sbjct: 37 WMSTGMFPQEFIIRFAESMKIALVTMHCYNVKTLKIEKSISDDATDFEAISEKEFEHTEGHLQTNDIPLNGT-----TATHLRFIVTSGYDHFVSVHRVSV 132
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1009594846|ref|XP_015926225.1| (intraflagellar transport protein 25 homolog [Parasteatoda tepidariorum]) HSP 1 Score: 64.3142 bits (155), Expect = 4.812e-9 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGS 131 W +TG+YPQ V+ S + + + SYNVK++ + S + EF V S GAPQ++ + + A+ L+ I G+D FCA+Y++S+ G+ Sbjct: 37 WATTGLYPQCFVIGLSEPADVKSISISSYNVKDLRIEKSIKEDPIEFEEVLETVFESSEGAPQQKAL----STSLCEARFLKFIIKSGYDHFCAVYKVSMNGT 135
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|47215908|emb|CAG00383.1| (unnamed protein product [Tetraodon nigroviridis]) HSP 1 Score: 64.3142 bits (155), Expect = 5.407e-9 Identity = 30/102 (29.41%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIR 129 W+STG++PQ ++ F+ + V ++SYNVK +++ +++ A++F +++ + G Q + NG I+A HLR I GHD F +++++S++ Sbjct: 37 WMSTGLFPQEFIIRFTESTNVSAVTIESYNVKHLKLEKNTSQSASQFESITEKEFEHVTGCLQSNTVPLNG-----IDATHLRFIITSGHDHFVSVHRVSVQ 133
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1101552726|ref|XP_018942290.1| (PREDICTED: intraflagellar transport protein 25 homolog [Cyprinus carpio] >gi|1101552728|ref|XP_018942291.1| PREDICTED: intraflagellar transport protein 25 homolog [Cyprinus carpio] >gi|966661619|gb|KTF96215.1| hypothetical protein cypCar_00002069 [Cyprinus carpio]) HSP 1 Score: 64.3142 bits (155), Expect = 5.515e-9 Identity = 31/101 (30.69%), Postives = 55/101 (54.46%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIR 129 WISTG++PQ ++ F I V + SYN+K + + ++D A +F AV+ F + + N + V+N HLR IL G+ F +++++S++ Sbjct: 37 WISTGMFPQEFIIRFPDNMKIFTVSIHSYNIKRLRIEKGTSDDAEKFEAVA----DTEFEHTENSLQANDISVNVLNTTHLRFLILSGYGPFVSVHKVSVQ 133
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1158860064|ref|XP_020323755.1| (intraflagellar transport protein 25 homolog [Oncorhynchus kisutch]) HSP 1 Score: 64.3142 bits (155), Expect = 5.552e-9 Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSI 128 W+STG++PQ ++ F+ I +V + YNVK +++ S +D AT+F A+S + + G Q I NG A HLR + G+D F +++++S+ Sbjct: 37 WMSTGMFPQEFIIRFAQSMKIALVTMHCYNVKTLKIEKSISDDATDFEAISEKEFEHTEGHLQTNDIPLNGT-----TATHLRFIVTSGYDHFVSVHRVSV 132
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1211366984|ref|XP_021460967.1| (intraflagellar transport protein 25 homolog isoform X2 [Oncorhynchus mykiss] >gi|1367434823|ref|XP_024271276.1| intraflagellar transport protein 25 homolog [Oncorhynchus tshawytscha] >gi|642107398|emb|CDQ73049.1| unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 63.929 bits (154), Expect = 5.833e-9 Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSI 128 W+STG++PQ ++ F+ I +V + YNVK +++ S +D AT+F A+S + + G Q I NG A HLR + G+D F +++++S+ Sbjct: 37 WMSTGMFPQEFIIRFAESMKIALVTMHCYNVKTLKIEKSISDDATDFEAISEKEFEHTEGHLQTNDIPLNGT-----TATHLRFIVTSGYDHFVSVHRVSV 132
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1316150829|ref|XP_023220576.1| (intraflagellar transport protein 25 homolog [Centruroides sculpturatus]) HSP 1 Score: 65.0846 bits (157), Expect = 7.055e-9 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG-----SDADHSVN-FKPSHSAQLPI 149 W +TG+YPQS VL + ++ + SYNVK + SS + EF+ + + + G+ Q+ + GNE A++LR I GHD FCA+Y++ ++ + + + N +P AQ+P+ Sbjct: 63 WSTTGLYPQSFVLALPNITTVENITFYSYNVKRLTTEKSSESEPMEFKPYAEIDLQATDGSLQK--VTFGNERN--EARYLRFIIETGHDHFCAVYKVQVKSRLSYTTSSSLTRNILQPLFLAQIPV 185
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|410923637|ref|XP_003975288.1| (PREDICTED: intraflagellar transport protein 25 homolog [Takifugu rubripes]) HSP 1 Score: 63.5438 bits (153), Expect = 8.935e-9 Identity = 32/102 (31.37%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIR 129 W+STG++PQ ++ F+ I V + SYNVK +++ +++ A++F +V+ + G Q + NG I A HLR I GHD F +++++S++ Sbjct: 37 WMSTGLFPQEFIIGFTHSTNISAVTMDSYNVKHLKLEKNTSQSASQFESVTEKEFDHVTGCLQSNTLPVNG-----IVATHLRFIITSGHDHFVSVHRVSVQ 133
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|742243291|ref|XP_010863152.1| (PREDICTED: intraflagellar transport protein 25 homolog [Esox lucius]) HSP 1 Score: 63.5438 bits (153), Expect = 9.639e-9 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSI 128 WISTG++PQ ++ F+ I +V L SYNVK +++ S +D AT+F +S + + G Q I NG + HLR + G D F +++++SI Sbjct: 37 WISTGMFPQEFIIRFAESMKISLVTLHSYNVKTLKIEKSISDDATDFEPISEKQLEHIEGHLQTTDIPLNG-----LTVTHLRFIVTSGFDHFVSVHRISI 132 The following BLAST results are available for this feature:
BLAST of intraflagellar transport protein 25 homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of intraflagellar transport protein 25 homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of intraflagellar transport protein 25 homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold405_size181423:5368..7677+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold405_size181423-snap-gene-0.33 ID=maker-scaffold405_size181423-snap-gene-0.33|Name=intraflagellar transport protein 25 homolog|organism=Tigriopus kingsejongensis|type=gene|length=2310bp|location=Sequence derived from alignment at scaffold405_size181423:5368..7677+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'intraflagellar transport protein 25 homolog' has the following synonyms
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