zinc finger cchc domain-containing protein 10, maker-scaffold408_size180710-snap-gene-0.40 (gene) Tigriopus kingsejongensis

Overview
Namezinc finger cchc domain-containing protein 10
Unique Namemaker-scaffold408_size180710-snap-gene-0.40
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of zinc finger cchc domain-containing protein 10 vs. L. salmonis genes
Match: EMLSAG00000002132 (supercontig:LSalAtl2s:LSalAtl2s139:1337776:1343209:1 gene:EMLSAG00000002132 transcript:EMLSAT00000002132 description:"maker-LSalAtl2s139-snap-gene-13.42")

HSP 1 Score: 80.1073 bits (196), Expect = 1.111e-21
Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    1 MPLGLGGFLPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTV 49
            MP G GG+LP+KS    +++RCQKCL+ GHWTYEC+ +RKYLHRDSR+ 
Sbjct:    1 MPYGTGGYLPRKSPTVAQSVRCQKCLEHGHWTYECKGERKYLHRDSRST 49
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BLAST of zinc finger cchc domain-containing protein 10 vs. SwissProt
Match: gi|78102500|sp|Q9CX48.1|ZCH10_MOUSE (RecName: Full=Zinc finger CCHC domain-containing protein 10)

HSP 1 Score: 70.0922 bits (170), Expect = 1.672e-15
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVE 59
            +K+E   + +RCQKCL+FGHWTYEC+  RKYLHR SRT  LK+ LKE E
Sbjct:   12 RKAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKE 60
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BLAST of zinc finger cchc domain-containing protein 10 vs. SwissProt
Match: gi|85718625|sp|Q5EB97.2|ZCH10_RAT (RecName: Full=Zinc finger CCHC domain-containing protein 10)

HSP 1 Score: 69.3218 bits (168), Expect = 3.143e-15
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVE 59
            +++E   + +RCQKCL+FGHWTYEC+  RKYLHR SRT  LK+ LKE E
Sbjct:   12 RQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKE 60
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BLAST of zinc finger cchc domain-containing protein 10 vs. SwissProt
Match: gi|84028163|sp|Q8TBK6.1|ZCH10_HUMAN (RecName: Full=Zinc finger CCHC domain-containing protein 10)

HSP 1 Score: 68.1662 bits (165), Expect = 1.263e-14
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   13 SEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVE 59
            SE   + +RCQKCL+FGHWTYEC   RKYLHR SRT  LK+ LKE E
Sbjct:   36 SEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKE 82
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|1330902329|gb|PNF27674.1| (hypothetical protein B7P43_G14590 [Cryptotermes secundus])

HSP 1 Score: 77.7962 bits (190), Expect = 4.128e-17
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:    1 MPLGLGGFLPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLK 56
            M +G GG L KK+    + +RCQKCL++GHWTYEC+  RKYLHR SRT  LK++LK
Sbjct:    1 MTVGNGGLLAKKNSSYPQGVRCQKCLEYGHWTYECKGKRKYLHRSSRTSQLKKRLK 56
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|646711665|gb|KDR16756.1| (Zinc finger CCHC domain-containing protein 10 [Zootermopsis nevadensis])

HSP 1 Score: 77.0258 bits (188), Expect = 6.610e-17
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0 
Query:    1 MPLGLGGFLPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQ 60
            M +G GG L KK+  P +  RCQKCL++GHWT+EC+  RKYLHR SRT  LK++LK  E+
Sbjct:    1 MTVGSGGMLAKKNSYPPQGARCQKCLEYGHWTFECKGKRKYLHRSSRTSQLKKRLKLREE 60
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|1083315018|ref|XP_018607346.1| (PREDICTED: zinc finger CCHC domain-containing protein 10 [Scleropages formosus] >gi|1083315020|ref|XP_018607347.1| PREDICTED: zinc finger CCHC domain-containing protein 10 [Scleropages formosus] >gi|1083315022|ref|XP_018607348.1| PREDICTED: zinc finger CCHC domain-containing protein 10 [Scleropages formosus] >gi|1083315024|ref|XP_018607349.1| PREDICTED: zinc finger CCHC domain-containing protein 10 [Scleropages formosus])

HSP 1 Score: 76.6406 bits (187), Expect = 1.046e-15
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKK 83
            +++E   + +RCQKCL+FGHWTYEC+  RKYLHR SRT  LK+KLK  E E K  L   S TD + +K KKK+
Sbjct:   12 RQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTTELKKKLK--ENETKLTLIPESGTDGSSEKVKKKR 82
[Close]
BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|1227986403|ref|XP_021924878.1| (zinc finger CCHC domain-containing protein 10-like isoform X2 [Zootermopsis nevadensis])

HSP 1 Score: 78.1814 bits (191), Expect = 1.837e-15
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:    1 MPLGLGGFLPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLK 56
            M +G GG L KK+  P +  RCQKCL++GHWT+EC+  RKYLHR SRT  LK++LK
Sbjct:    1 MTVGSGGMLAKKNSYPPQGARCQKCLEYGHWTFECKGKRKYLHRSSRTSQLKKRLK 56
[Close]
BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|149052560|gb|EDM04377.1| (zinc finger, CCHC domain containing 10, isoform CRA_a [Rattus norvegicus])

HSP 1 Score: 73.1738 bits (178), Expect = 5.708e-15
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKKKQKGR 88
            +++E   + +RCQKCL+FGHWTYEC+  RKYLHR SRT  LK+ LKE   +E R L+ +     T +KTKKK++   R
Sbjct:   12 RQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKE---KENRLLQQSMGETNTERKTKKKRRGASR 86
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|972188995|ref|XP_015176130.1| (PREDICTED: zinc finger CCHC domain-containing protein 10-like [Polistes dominula])

HSP 1 Score: 73.559 bits (179), Expect = 1.030e-14
Identity = 37/77 (48.05%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:    9 LPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKKKQ 85
            + KKS  P++ +RCQKCL +GHW+YEC+  RKYLHR SRTV LK  LK +++E + K +   +  + GQK K+ +K+
Sbjct:    8 VIKKSNLPSQGMRCQKCLNYGHWSYECKGKRKYLHRSSRTVQLKLALK-MQEENQMKEKKEEVKKSHGQKRKRMRKE 83
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|817253382|ref|XP_012297895.1| (zinc finger CCHC domain-containing protein 10 [Aotus nancymaae])

HSP 1 Score: 71.633 bits (174), Expect = 2.176e-14
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKKK 84
            +++E   + +RCQKCL+FGHWTYEC   RKYLHR SRT  LK+ LKE   +E R L   S+ + T ++  KKK+
Sbjct:   12 RQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKE---KENRLLLQQSIGETTVERKTKKKR 82
[Close]
BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|1101384360|dbj|GAU97197.1| (hypothetical protein RvY_08538 [Ramazzottius varieornatus])

HSP 1 Score: 73.559 bits (179), Expect = 2.294e-14
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:    8 FLPKKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEK 63
            FL +K++PP E+I+CQKCLQ GHWTY+C N  KYL R ++T  LK+ ++  E+E K
Sbjct:   15 FLNRKAQPPAESIKCQKCLQMGHWTYQCTNPPKYLSRTTKTTELKKDIRRREEEAK 70
[Close]
BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|1129939292|ref|XP_019728865.1| (PREDICTED: zinc finger CCHC domain-containing protein 10-like isoform X1 [Hippocampus comes])

HSP 1 Score: 73.1738 bits (178), Expect = 2.536e-14
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKKKQKGR 88
            +++E   + +RCQKCL+ GHWTYEC   RKY+HR SRTV +K+KLKEVE + +      S+T    Q + +KK +K +
Sbjct:   12 RQAEANKQHVRCQKCLEMGHWTYECTGKRKYVHRPSRTVEMKKKLKEVENQPR------SITGPGQQSSSEKKTKKAK 83
[Close]
BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Match: gi|725550583|ref|XP_010337080.1| (PREDICTED: zinc finger CCHC domain-containing protein 10 [Saimiri boliviensis boliviensis])

HSP 1 Score: 71.2478 bits (173), Expect = 2.796e-14
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:   11 KKSEPPTETIRCQKCLQFGHWTYECQNDRKYLHRDSRTVALKRKLKEVEQEEKRKLEINSLTDATGQKTKKKKK 84
            +++E   + +RCQKCL+FGHWTYEC   RKYLHR SRT  LK+ LKE   +E R L   S+ + T ++  KKK+
Sbjct:   12 RQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKE---KENRLLLQQSIGETTVERKTKKKR 82
The following BLAST results are available for this feature:
BLAST of zinc finger cchc domain-containing protein 10 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000021321.111e-2163.27supercontig:LSalAtl2s:LSalAtl2s139:1337776:1343209... [more]
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BLAST of zinc finger cchc domain-containing protein 10 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|78102500|sp|Q9CX48.1|ZCH10_MOUSE1.672e-1563.27RecName: Full=Zinc finger CCHC domain-containing p... [more]
gi|85718625|sp|Q5EB97.2|ZCH10_RAT3.143e-1561.22RecName: Full=Zinc finger CCHC domain-containing p... [more]
gi|84028163|sp|Q8TBK6.1|ZCH10_HUMAN1.263e-1465.96RecName: Full=Zinc finger CCHC domain-containing p... [more]
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BLAST of zinc finger cchc domain-containing protein 10 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1330902329|gb|PNF27674.1|4.128e-1758.93hypothetical protein B7P43_G14590 [Cryptotermes se... [more]
gi|646711665|gb|KDR16756.1|6.610e-1756.67Zinc finger CCHC domain-containing protein 10 [Zoo... [more]
gi|1083315018|ref|XP_018607346.1|1.046e-1554.79PREDICTED: zinc finger CCHC domain-containing prot... [more]
gi|1227986403|ref|XP_021924878.1|1.837e-1558.93zinc finger CCHC domain-containing protein 10-like... [more]
gi|149052560|gb|EDM04377.1|5.708e-1550.00zinc finger, CCHC domain containing 10, isoform CR... [more]
gi|972188995|ref|XP_015176130.1|1.030e-1448.05PREDICTED: zinc finger CCHC domain-containing prot... [more]
gi|817253382|ref|XP_012297895.1|2.176e-1450.00zinc finger CCHC domain-containing protein 10 [Aot... [more]
gi|1101384360|dbj|GAU97197.1|2.294e-1453.57hypothetical protein RvY_08538 [Ramazzottius varie... [more]
gi|1129939292|ref|XP_019728865.1|2.536e-1446.15PREDICTED: zinc finger CCHC domain-containing prot... [more]
gi|725550583|ref|XP_010337080.1|2.796e-1450.00PREDICTED: zinc finger CCHC domain-containing prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold408_size180710supercontigscaffold408_size180710:119653..122720 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold408_size180710-snap-gene-0.40-mRNA-1maker-scaffold408_size180710-snap-gene-0.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold408_size180710:119653..122720-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold408_size180710-snap-gene-0.40 ID=maker-scaffold408_size180710-snap-gene-0.40|Name=zinc finger cchc domain-containing protein 10|organism=Tigriopus kingsejongensis|type=gene|length=3068bp|location=Sequence derived from alignment at scaffold408_size180710:119653..122720- (Tigriopus kingsejongensis)
ATAAAATCCCAGCCACAATAACAAACGTGGAGAAGGTGGGAAATCGATGC
TAACTTCCATTTCGTGAGTGATTTTCGCCCCTTGTCACCATGCCGTTGGG
ATTGGGTGGATTTCTGCCCAAGAAAAGGTAAGTCCAGACTTCCATCAGAA
TCAAAGCAAGGCCATATGGACATCGGCACCGACGAGAGGGTGTACTACGT
ATACGTTGGACCCAATGGGCTCAATCAGAGCCATATCCCGGCTGGGGACT
CAATCATACATGCTGGCCGATGGGTAGATCTGAACTCTACTCTGAAGGCG
ACATTTTATGGTTATGATGCCTTAGCTCAACAAGACCGAGTGCTTCCCGC
CAGGAATGGTCGAATTATGCCCAAAACAGCTTACGTCTTCGAGTCTGCCA
TTTTACCATGGTCTAGTCTACATATGCACTATACTATGGGCCGTCCATGC
ATAGACGGGACTCGTTCTTGGGTTATTTTTGTCATTGCCCCTAAAGACTT
GAACTGCCCCTAACTAATTCAATGACATCGGATCTCGTATACGACCCGTG
GTATTGGATCATTTATCCAGATCGATGTCTATTGAATGCCCATGAAGGAT
CATCTAGAGGGATATAGATCCTACCATGGCTCAATCGTCCGTCTATCTGT
CGTCCCATCCGTTGTCGGCTGGAGAGGTCACTACCGTAATCTGGATCCAA
AAATACCTTCAGGGTCCATTTATGTGAAGGACGGCAGAATGCGGCCCTTT
GAAATGTCTGGAATTATATGTAGTAGTATATTCATGATTAACGAGATTCG
AGACAGACGGACTCAACGCGTTTTTCAACCCTCTATATCTTACATTTAGA
GCACTGAGGTGCCAAATTAAAACATAGAATTATCAACATTTGGAGCCAAA
GAACAATGCACAAAATCGTCCTCCTTCCGCAAAGTTGGAGCGTGATTCGA
AACCTCAGCTGAAGCTCTCTGCTCCTCTCCTGCTAGTTTTAATGGGATAT
GACTCCGTAAGCTCATGGATAAAAACATGTACAATGTGCAGGTCCACCAG
TAACATTAGAAACGGAGCAGCCCGTACGTAGAAATAAATAAAGCTGACCA
GATCGATTCTGGCAGACCGTTTAAGGGAGCCAAATGAGCCACAGAGCATG
TTATCACCGAGATCCTAAGCAAATCTGAATTGGGAAAAGCGATAGGTGCC
AACATAGGTCAAAAAGGAACACATTAATTACAGTATATGTAGTTAAATAG
CTGTGTTTTTTAATGATGTGCCTTCAAAGTGTTCTTCATGATGCCCCTTC
AAAGTGTTCTTCATGATGCCCTGTGTTCCATCTTATGTACCATATGTACT
TATGTAGTGGATGTGTTTCAAGTAGTGTGGTTAGAAAGACGTACGTATTT
TTTAGCGCCGTTGGAAAACATGTATTAGGTGTCTTGCGTCGTTAGACTAA
TGGTGACAACCACATGCTCATGTTCCAACTTCCAAGTGAATGAATCAAAC
TGGGAACTTGCTGAGCCCAGGCGAGTTGGCAACGGGGTTGAGTTCGACCG
TGGGAGAATGTGTAGTTAATGGTTTGTTTGTCTTCATGTATGTTTTGAGC
ATAAAAAGCATGTTTCCAATTTGTGTGTGGATTTGTTTAGTCTAGATTCG
AAGCGAGTGTATGCGATATCCCTGTGAATCAAATTGCCAGTCCCCGAGCT
TTTCCTCCCCGTTCCTCTTTCGCTTCCTAGCAATTCTATAAACCAAAAGT
AGACACTTCGCTACGTGGGGAAATAAGTGGTCCTCCTCAAAAGCCATCTA
AGCATTGGGTTAGTGGAGCCAGGGTGGAGTTGGTTGATACCATGCCAAAA
TGATCTATAGACCACGACTATGCCAGTTCATTGTCTGAGTAACTGGACAC
TGCGACCTGAAATACTTCAGCGCAATTTTTGCAAGGCCCGACCAGATATT
TGGCCTTTGTGGCAGTGAGGAGGAAACTCCAGCTGGTCTGGGTTAGAGTG
GCCCTACTTTATCCCACCTTTGGGGGACCTCTCCAAGACGGACAGGCAAT
ATTAGAAAAACTGGACCGGGGGAATCGAGTCCTCAATCTGGTGGATCGAA
CCACCGCTGTTTAGCGTCCAATGATTGCATTGTATGTATTAAATGCTACA
GAAGAGTTAAAGGGGGCTAAGTTTCTCTGGAGGCTTCATGCTTGAGATAT
TTCTTCTATAAAATTGATCAGGGCCTACGAAACAAACAGCAGTTGATCAT
ATATGGCGAGTTTTAGTATTTTAGAGGCCTAGAAAACGCATACCACTGTC
CGGTGCCAAACAACTGCTGGAACAGGATGTCACCAGGATGCAAAGCTAAA
TATTTATTCCAAACATGTGTTCAGTATCGCTAACCGTGGTTGAATCCCGA
CATAAAATGTCGAGACTGCTGCAGCTAAATATCTGGATAGGAGCAGCTAT
GTGTAGTGCAAATGTATATATATATTTCACCTCACACATGTGAAAAGTGA
TGCGTCTTAAGGGTCTCAGTGATACCCTTTGGAAGTTGGGGAACAAAAGG
CGACTTTTGAAGTCATGCAGTTCCTTTTAAATGTCGTTGGAGGCGGATTG
GGTTCAGTCGACTGAGATGTTGTCAACACAATGTACATAATTCAAAATAG
CACACAATAAACTACCACATCATTGGTTCTAGATTTTGACTTTGGGATAC
TCCTGAGCCTCTGGCTAAAAGTATGGCCCCATTAGATGAAGAGAGGTTGG
CAAGCTGTAGAGTCCTTCCAAGCGAGTACTGTACCAGTTTTGCCGCTCGA
TTATTTGAGTCCGCCTCGTTTTCAGCGAACCTCCCACCGAAACGATCCGA
TGCCAGAAGTGCCTCCAGTTTGGTCATTGGACGTACGAGTGCCAGAACGA
CAGAAAATATCTTCACCGCGATTCCCGGACTGTGGCTCTTAAGAGGAAAT
TGAAAGAGGTGGAACAAGAGGAAAAAAGAAAATTGGAAATTAATTCTCTC
ACCGACGCAACGGGCCAAAAGACTAAGAAGAAGAAGAAACAGAAAGGAAG
GTAGGTCACCACCACCAA
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Synonyms
The feature 'zinc finger cchc domain-containing protein 10' has the following synonyms
Synonym
Tk05209
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