RPE-spondin, maker-scaffold409_size180341-snap-gene-0.30 (gene) Tigriopus kingsejongensis

Overview
NameRPE-spondin
Unique Namemaker-scaffold409_size180341-snap-gene-0.30
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of RPE-spondin vs. L. salmonis genes
Match: EMLSAG00000010385 (supercontig:LSalAtl2s:LSalAtl2s689:99819:220343:-1 gene:EMLSAG00000010385 transcript:EMLSAT00000010385 description:"maker-LSalAtl2s689-snap-gene-1.6")

HSP 1 Score: 124.02 bits (310), Expect = 2.425e-35
Identity = 66/135 (48.89%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    1 MAVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSE 135
            + V DC  S WS WS C+ +CG G ++RSR+I Q+PSPGGKSC +L Q R C+G RC     +YKSPI ETAGLL  KF       K  WD+RENLFLH E           WN K        E+GYQ+D+P E
Sbjct:   69 IIVTDCVTSDWSEWSECNQNCGVGVKSRSRVIVQYPSPGGKSCGSLNQNRRCVGQRCSMYQRQYKSPIGETAGLLSAKFLNPK-KHKSSWDIRENLFLHNE-----------WNRKE-----VREDGYQSDEPQE 186          
BLAST of RPE-spondin vs. L. salmonis genes
Match: EMLSAG00000010379 (supercontig:LSalAtl2s:LSalAtl2s689:23775:24831:-1 gene:EMLSAG00000010379 transcript:EMLSAT00000010379 description:"maker-LSalAtl2s689-snap-gene-0.53")

HSP 1 Score: 84.7297 bits (208), Expect = 1.390e-20
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    3 VRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKY--KSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQM 109
            V DC +SGW  WS CD  CG G   R R I   PS GG  C  LE+K+ C    C RK+ K+  K  IRETA L+P KF +K     +++DVR  + +  +  A++  +
Sbjct:   26 VIDCTVSGWXXWSQCDVQCGAGTSIRRRQIIHPPSNGGNECPVLEEKKPCRVKNCRRKHDKFNDKMAIRETAMLVPAKFAKKQRRQARNYDVRHRVCVSCDGNAQRDHL 134          

HSP 2 Score: 62.3882 bits (150), Expect = 2.730e-12
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0
Query:  178 RMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETR-DCPCTNGADFIFV 240
            R+C  C  +A+R  LG RC GHG +   TR+++ + P C G+W R+   +  CPC  GAD +FV
Sbjct:  120 RVCVSCDGNAQRDHLGGRCTGHGAEGRKTRFKNILSPHCKGKWTRLQVVQGQCPCPEGADLVFV 183          
BLAST of RPE-spondin vs. SwissProt
Match: gi|122143988|sp|Q32L50.2|SBSPO_BOVIN (RecName: Full=Somatomedin-B and thrombospondin type-1 domain-containing protein; AltName: Full=RPE-spondin; Flags: Precursor)

HSP 1 Score: 67.781 bits (164), Expect = 2.486e-12
Identity = 57/246 (23.17%), Postives = 88/246 (35.77%), Query Frame = 0
Query:    3 VRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFK-----MQKGRRMCALCPKDAKRQSLGNRCKGHGVDY---ELTRWRSTVFPKCHGQWQRIYETRDCPCTNGADFIFV 240
             R C +  WS WS C S C   A+ R R + Q P  GG+ C ALE++  CL         +Y +P  E  G   V  +    +  K+                                            +  A+SP +  +  D  YC  F+    T  C  +          +++G  +C  C   A   S+  RC G G+D    +   W++   P+C G W+++     C C     FIF+
Sbjct:   72 ARPCIVGEWSPWSGCASQCRPTARVRRRAVQQEPQNGGEPCPALEERAGCL---------EYATPQGEDCGHAFVPAFITTSAFNKE-------------------------------------------RTRQAASPHWTTSTEDAGYCMEFKTESLTHHCALENRPLTRWMQYLREGYTVCVDCQPPAM-NSVSLRCSGDGLDSDGNQTLHWQAIGNPRCQGTWKKVRRVEQCSCPAVHSFIFI 264          
BLAST of RPE-spondin vs. SwissProt
Match: gi|123797423|sp|Q3UPR9.1|SBSPO_MOUSE (RecName: Full=Somatomedin-B and thrombospondin type-1 domain-containing protein; AltName: Full=RPE-spondin; Flags: Precursor)

HSP 1 Score: 52.7582 bits (125), Expect = 4.656e-7
Identity = 55/248 (22.18%), Postives = 83/248 (33.47%), Query Frame = 0
Query:    3 VRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAG--LLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFK-----MQKGRRMCALCPKDAKRQSLGNRCKGHGVDY---ELTRWRSTVFPKCHGQWQRIYETRDCPCTNGADFIFV 240
             R C +  WS WS C   C    + R R + Q P  GG  C  LE++  CL         +Y S   +  G   +P      V + K+                                                A SP +  +  D  YC  F+    T  C             +++G  +C  C   A   S+  RC G G+D    +  RW++   P+C G W+++     C C +   FIF+
Sbjct:   72 ARPCFVGEWSPWSGCAGQCQPTTRVRRRSVRQEPLNGGAPCPPLEERAGCL---------EYSSSQSQDCGHSFVPAFITSSVFNKKR---------------------------------------------IIQAVSPQWSTHTKDAGYCMEFKTESLTPHCALVNSPLTRWMQYLREGYTVCVDCQPPAM-NSVSLRCSGDGLDSDGNQTLRWQAIGNPRCQGTWKKVRRVEQCSCPDVHRFIFI 264          
BLAST of RPE-spondin vs. nr
Match: gi|290462223|gb|ADD24159.1| (RPE-spondin [Lepeophtheirus salmonis])

HSP 1 Score: 156.762 bits (395), Expect = 3.573e-43
Identity = 92/242 (38.02%), Postives = 120/242 (49.59%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKY--KSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETR-DCPCTNGADFIFV 240
             V DC +SGWS WS CD  CG G   R R I   PS GG  C  LE+K+ C    C RK+ K+  K  IRETA L+P KF +K     +++DVRENL  + +K                            DQ  ES SS           YC VF + K+  ACH  +D   + KG R+C  C  +A+R  LG RC GHG +   TR+++ + P C G+W R+   +  CPC  GAD +FV
Sbjct:   82 GVIDCTVSGWSEWSQCDVQCGAGTSIRRRQIIHPPSNGGNECPVLEEKKPCRVKNCRRKHDKFNDKMAIRETAMLVPAKFAKKQRRQARNYDVRENLKTYIQK----------------------------DQKEESQSS-----------YCVVFHVDKSMHACHRSEDTSMLLKGHRVCVSCDGNAQRDHLGGRCTGHGAEGRKTRFKNILSPHCKGKWTRLQVVQGQCPCPEGADLVFV 284          
BLAST of RPE-spondin vs. nr
Match: gi|1228018194|ref|XP_021941078.1| (somatomedin-B and thrombospondin type-1 domain-containing protein-like, partial [Zootermopsis nevadensis])

HSP 1 Score: 144.821 bits (364), Expect = 2.872e-39
Identity = 89/246 (36.18%), Postives = 117/246 (47.56%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFL-HPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRI-----YETRDCP-CTNGADFIFV 240
            AV DCA+S W  WS CD  CG G  TRSR + + P  GGK C +L QKR C G RC       +S I+ETA LLPV         + + D+R NL L +P+  AE                                          D+ YC  FE++K +KAC  + +F  +++G R+C  C   A R++LG RC GHGV+   TRW +   P CHG+W R+          CP C  G D+IFV
Sbjct:   31 AVVDCAVSAWGPWSDCDVECGTGMMTRSRTVEKQPENGGKHCPSLIQKRGCQGSRCTHNP---RSAIKETAMLLPVTLSSSRRVNETN-DIRRNLRLRYPKDPAE------------------------------------------DKEYCVEFEVLKASKACRKEPNFSSLREGERVCVRCETQALRKNLGYRCAGHGVEDRATRWTALSAPHCHGKWIRLEAGSSVHDASCPTCKKGPDYIFV 230          
BLAST of RPE-spondin vs. nr
Match: gi|1316204545|ref|XP_023212638.1| (somatomedin-B and thrombospondin type-1 domain-containing protein-like [Centruroides sculpturatus])

HSP 1 Score: 144.05 bits (362), Expect = 5.215e-39
Identity = 89/242 (36.78%), Postives = 115/242 (47.52%), Query Frame = 0
Query:    3 VRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFK--MQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETRDCPCTNGA--DFIFV 240
            + DC +S W  WSSC+  CG G  +R R I QHP  GG+ C  L QKR CLG RC+ K        RE A +LP   Y ++ +A    D+R+NL L                             Y  D   ES+           + YC VFE+ K  KACH+ +D     M KG ++C  C   A R+ LG RC GHG+  + TRW +   P+CHG+W R  +   CPC  G   DFIFV
Sbjct:   23 LTDCEVSEWGRWSSCNVDCGTGFMSRERNIIQHPQNGGRHCPELIQKRGCLGTRCETK--SVIKAHREMALILP-SMYSQIRTANSTNDIRKNLRLR----------------------------YPKDPAKESS-----------KEYCIVFEVTKVRKACHHMEDEVSKVMTKGSQICVTCEHAAMRKHLGYRCNGHGIHNKPTRWATLSNPQCHGRWIRKEKIDQCPCHEGGKPDFIFV 222          
BLAST of RPE-spondin vs. nr
Match: gi|1316201557|ref|XP_023211060.1| (somatomedin-B and thrombospondin type-1 domain-containing protein-like [Centruroides sculpturatus])

HSP 1 Score: 144.436 bits (363), Expect = 1.972e-38
Identity = 90/243 (37.04%), Postives = 115/243 (47.33%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFK--MQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETRDCPCTNGA--DFIFV 240
             V DC +S W  WSSC+  CG G  +R R I QHP  GG+ C  L QKR CLG RC+ K        RE A +LP   Y ++ +A    D+R+NL L                             Y  D   ES+           + YC VFE+ K  KACH+ +D     M KG ++C  C   A R+ LG RC GHG+  + TRW +   P+CHG+W R  +   CPC  G   DFIFV
Sbjct:   79 GVTDCEVSEWGRWSSCNVDCGTGFMSRERNIIQHPQNGGRHCPELIQKRGCLGTRCETK--SVIKAHREMALILP-SMYSQIRTANSTNDIRKNLRLR----------------------------YPKDPAKESS-----------KEYCIVFEVTKVRKACHHMEDEVSKVMTKGSQICVTCEHAAMRKHLGYRCNGHGIHNKPTRWATLSNPQCHGRWIRKEKIDQCPCHEGGKPDFIFV 279          
BLAST of RPE-spondin vs. nr
Match: gi|1330897887|gb|PNF25649.1| (hypothetical protein B7P43_G00629, partial [Cryptotermes secundus])

HSP 1 Score: 140.969 bits (354), Expect = 4.032e-38
Identity = 86/244 (35.25%), Postives = 113/244 (46.31%), Query Frame = 0
Query:    3 VRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRI-----YETRDCP-CTNGADFIFV 240
            V DCA+S W  WS CD  CG G  TRSR + + P  GGK C +L QKR C G +C       +S I+ETA LLPV         + + D+R NL L   K                                         D   D+ YC  FE++K +KAC  + +F  +++G R+C  C   A R++LG RC GHGV+   TRW +   P CHG+W R+          CP C  G D+IFV
Sbjct:    1 VVDCAVSAWGPWSECDVECGTGMMTRSRTVEKQPENGGKHCPSLIQKRGCQGTQCPHNP---RSAIKETAMLLPVTLSSSRRVNETN-DIRRNLRLRYPK-----------------------------------------DPAQDKEYCVEFEVLKASKACRKEPNFSSLREGERVCVRCETQALRKNLGYRCAGHGVEDRATRWTALSAPHCHGKWIRLDAGSSVHDASCPTCKKGPDYIFV 199          
BLAST of RPE-spondin vs. nr
Match: gi|1339054122|ref|XP_023715451.1| (somatomedin-B and thrombospondin type-1 domain-containing protein [Cryptotermes secundus])

HSP 1 Score: 139.813 bits (351), Expect = 1.110e-36
Identity = 86/245 (35.10%), Postives = 113/245 (46.12%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRI-----YETRDCP-CTNGADFIFV 240
             V DCA+S W  WS CD  CG G  TRSR + + P  GGK C +L QKR C G +C       +S I+ETA LLPV         + + D+R NL L   K                                         D   D+ YC  FE++K +KAC  + +F  +++G R+C  C   A R++LG RC GHGV+   TRW +   P CHG+W R+          CP C  G D+IFV
Sbjct:   83 GVVDCAVSAWGPWSECDVECGTGMMTRSRTVEKQPENGGKHCPSLIQKRGCQGTQCPHNP---RSAIKETAMLLPVTLSSSRRVNETN-DIRRNLRLRYPK-----------------------------------------DPAQDKEYCVEFEVLKASKACRKEPNFSSLREGERVCVRCETQALRKNLGYRCAGHGVEDRATRWTALSAPHCHGKWIRLDAGSSVHDASCPTCKKGPDYIFV 282          
BLAST of RPE-spondin vs. nr
Match: gi|1009540317|ref|XP_015906559.1| (somatomedin-B and thrombospondin type-1 domain-containing protein-like [Parasteatoda tepidariorum])

HSP 1 Score: 136.346 bits (342), Expect = 3.409e-35
Identity = 84/243 (34.57%), Postives = 114/243 (46.91%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHN--DKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETRDCPC--TNGADFIFV 240
             V DC +S WS WS C + CG G   R R + +H   GG+SC  L QKRSC G +CD+    +    RE A +LP   Y  +       D+R NL L   K  E+ + K+                                       YC VFEL+KT KAC N   +   K++KG  +C  C   A R+ LG RC+GHGV+++ TR+    FP+CHG+W++      C C     A+FIFV
Sbjct:   90 GVVDCKVSAWSSWSDCSAVCGFGTMKRERHVIKHEVNGGQSCPELLQKRSCYGSQCDKH--SHSKANREIAMILPAT-YSVIRQLNASHDIRSNLRLRYRKDPEQEKSKE---------------------------------------YCVVFELLKTKKACENLATEISLKIEKGSMVCVSCETAAMRKHLGYRCQGHGVEHKSTRFAFLSFPQCHGRWKKKETVEKCNCDEEGKANFIFV 290          
BLAST of RPE-spondin vs. nr
Match: gi|1229874204|ref|XP_022162012.1| (somatomedin-B and thrombospondin type-1 domain-containing protein [Myzus persicae])

HSP 1 Score: 133.65 bits (335), Expect = 2.813e-34
Identity = 85/245 (34.69%), Postives = 116/245 (47.35%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRI-----YETRDCP-CTNGADFIFV 240
             V DC +S W  WS CD+ CG G  TR R + + P  GGK C ++ QKR+C+G RC        S ++ETA LLP       LS  +  D+R NL         K ++ K                    +P         +D ++ E YC +FE++K TKAC    ++  +++G R+C  C     RQSLG RC GHG     TRW     P CHG+W R+      +   CP C  GA F+FV
Sbjct:   85 GVIDCVMSEWESWSECDTECGSGMMTRKRQVMKTPVNGGKHCPSMVQKRACMGTRCPNYP---GSALKETAMLLPASLASNRLS-NESQDIRHNL---------KYRLSK--------------------EP---------VDLDSKE-YCVLFEVMKATKACRKVSEYSLLREGERVCVRCDTQVMRQSLGFRCPGHGTMDRATRWTVLSAPHCHGKWVRLESAGQQDGHSCPMCKKGAQFVFV 286          
BLAST of RPE-spondin vs. nr
Match: gi|328698394|ref|XP_003240630.1| (PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein [Acyrthosiphon pisum])

HSP 1 Score: 133.265 bits (334), Expect = 3.555e-34
Identity = 85/245 (34.69%), Postives = 116/245 (47.35%), Query Frame = 0
Query:    2 AVRDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFFKMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRI-----YETRDCP-CTNGADFIFV 240
             V DC +S W  WS CD+ CG G  TR R + + P  GGK C ++ QKR+C+G RC        S ++ETA LLP       LS  +  D+R NL         K ++ K                    +P         +D ++ E YC +FE++K TKAC    ++  +++G R+C  C     RQSLG RC GHG     TRW     P CHG+W R+      +   CP C  GA F+FV
Sbjct:   85 GVIDCVMSEWESWSECDTECGSGMMTRKRQVMKTPVNGGKHCPSMVQKRACMGTRCPNYP---GSALKETAMLLPASLASNRLS-NESQDIRHNL---------KYRLSK--------------------EP---------VDLDSKE-YCVLFEVMKATKACRKVSEYSLLREGERVCVRCDTQVMRQSLGFRCPGHGTMDRATRWTVLSAPHCHGKWVRLESAGQQDGHSCPMCKKGAQFVFV 286          
BLAST of RPE-spondin vs. nr
Match: gi|675372632|gb|KFM65534.1| (RPE-spondin, partial [Stegodyphus mimosarum])

HSP 1 Score: 133.265 bits (334), Expect = 3.974e-34
Identity = 83/241 (34.44%), Postives = 117/241 (48.55%), Query Frame = 0
Query:    4 RDCALSGWSVWSSCDSSCGRGAQTRSRLITQHPSPGGKSCEALEQKRSCLGGRCDRKYWKYKSPIRETAGLLPVKFYEKVLSAKKDWDVRENLFLHPEKLAEKSQMKKLWNSKHQAFGNAIEEGYQADQPSESASSPPYIDNETDESYCTVFELIKTTKACHNDKDFF--KMQKGRRMCALCPKDAKRQSLGNRCKGHGVDYELTRWRSTVFPKCHGQWQRIYETRDCPC-TNG-ADFIFV 240
            R+C +SGW  WS C++ CG G  TR R +    + GG+ C  L QKRSC G RC+     +    RETA +L    Y  +    +  D+R NL +                             Y+ D   E +           ++YC VFE+ K  K C +  +    K++KG ++C +C   A R+ LG RC GHGVD++ TR+    FP+CHG+W+R+  T  C C  NG ADFIFV
Sbjct:   81 RNCEVSGWGPWSECNTDCGTGIMTRERHVIHPAANGGEVCPELSQKRSCYGTRCEENI--HVKANRETAMILSAT-YSTIRHLNESKDIRNNLRIK----------------------------YRKDPEVEKS-----------KAYCIVFEVTKAKKHCESLGNEISPKLEKGSKVCVVCETAAMRKHLGYRCHGHGVDHKTTRFAFLAFPQCHGRWKRLEMTDKCMCDENGKADFIFV 279          
The following BLAST results are available for this feature:
BLAST of RPE-spondin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000103852.425e-3548.89supercontig:LSalAtl2s:LSalAtl2s689:99819:220343:-1... [more]
EMLSAG000000103791.390e-2040.37supercontig:LSalAtl2s:LSalAtl2s689:23775:24831:-1 ... [more]
back to top
BLAST of RPE-spondin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|122143988|sp|Q32L50.2|SBSPO_BOVIN2.486e-1223.17RecName: Full=Somatomedin-B and thrombospondin typ... [more]
gi|123797423|sp|Q3UPR9.1|SBSPO_MOUSE4.656e-722.18RecName: Full=Somatomedin-B and thrombospondin typ... [more]
back to top
BLAST of RPE-spondin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|290462223|gb|ADD24159.1|3.573e-4338.02RPE-spondin [Lepeophtheirus salmonis][more]
gi|1228018194|ref|XP_021941078.1|2.872e-3936.18somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|1316204545|ref|XP_023212638.1|5.215e-3936.78somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|1316201557|ref|XP_023211060.1|1.972e-3837.04somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|1330897887|gb|PNF25649.1|4.032e-3835.25hypothetical protein B7P43_G00629, partial [Crypto... [more]
gi|1339054122|ref|XP_023715451.1|1.110e-3635.10somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|1009540317|ref|XP_015906559.1|3.409e-3534.57somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|1229874204|ref|XP_022162012.1|2.813e-3434.69somatomedin-B and thrombospondin type-1 domain-con... [more]
gi|328698394|ref|XP_003240630.1|3.555e-3434.69PREDICTED: somatomedin-B and thrombospondin type-1... [more]
gi|675372632|gb|KFM65534.1|3.974e-3434.44RPE-spondin, partial [Stegodyphus mimosarum][more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold409_size180341supercontigscaffold409_size180341:109441..116855 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold409_size180341-snap-gene-0.30-mRNA-1maker-scaffold409_size180341-snap-gene-0.30-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold409_size180341:109441..116855-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold409_size180341-snap-gene-0.30 ID=maker-scaffold409_size180341-snap-gene-0.30|Name=RPE-spondin|organism=Tigriopus kingsejongensis|type=gene|length=7415bp|location=Sequence derived from alignment at scaffold409_size180341:109441..116855- (Tigriopus kingsejongensis)
ATGGCGGGTGAGACAAATGGATCTGGTTACAACCACCAACGACTTGGGAA GCGGAGAAAGTTATCTAGGATGATGATGTTTGGGAGAGCCTTCATGAGGA ACACTCGAGTTGTTTTGGGTAATTGCATGTAAAGGAATCGCCATGGAAAC CAGTCCCACCAATTCCCATGGAATCGGACACAACCTCAGGCAGATTATCA TCCACCCAAGCCTCCTCTTCCATCACTTGGCTCCAGTCATTAAAGTGGGG GATTTTTTCCCAACCGCAGTGGGATTAAAAATACGGGATCCACAAATAGA TTGTCGACGAGCTTTTCTGCTTTCCCAACTTGTCCATCCAAAACCCATAG CAGTTTAATTTCGCTTCAATGCACAATAAAGTTATCCTGTTTGATGAAGC TCTTTTCCATCCAAGTTGAAGCATGACCTTGGGTATAAATATGTGTCGTG GATTTGCCTATAAAAAGCGGGGTAACAGCAATGCAGCCAGATCCCACTTG GTGGTTCATTATTAGGGCTGGGCAAAAACGCACATTATATTCATTTTTTC ATAAAGCGGGTTGTTGGCATTTTTCATATTATATGGTGTTTCTGCTTTTT CTCGTTTTCGGTATCCGAATTTTTTCGATTTTTGGCAGCCATGATTTTGG CCAAAAATTAATTGTTGAAGCGAGAGAAAAGATCCAAATACCTCTTTCTA CTTAATCCACATTGAAGTTATTATGCCTATTCGGACGCCAATTGTACCCA AATTTGTCCATTTTCAAAAATAGGCAAAAAAGTGCTATTTTGGGCACGAA TACGCCGTTGCAGGATTTCCTTAAATTGGATCTATGCTCTTTATCTTCAC GTTTTGATATAATGCGATCAAAATATTAGTTTCAAGAAAGGGAGAAAATC ATGACACTTTTTGGGGTTTTGGTACCTACTTTTATCAGTTTTCTTGTTTT CGTCCAAAGCACACATTATTCACCCCATCAGCTCCTTTACAAAGTGGAAG TTTATTTACCAGGGTCATCCCACGTACAATTTCCTGCCAAAACGTTTAGA TTATCACAAATTTAGCCGAACTGAGTAAACTTTTGTTCATCCACTTCCAA GCGTGGCTTGAAGGCTGGACCGAACTAAAATGGTTCAGCCCCAGTTGGTT GATTCACACGCAATCTCGTTGGTTTGAGTGCAACCAATACGTCCTTCTCT TTGTACACGAGTCTGGTTTAATAAATAAGCTTTTCTATCAAAGTGGTCCT GAATGAGTTGCATCCATAGTCCATCCAATAAGCTTAACGACCAGCTGGCC GAGAAGGCAGTCCAGGGTTGCCCACCTATTCTTTCTATTGTGTCGTGCTC ACCTCAGATCAAGTGTTGCGATAAGACCCCAGGGTTGCTATGGGGTTTGG GGGTGAGTTAGTTTATTATTACACAGGGTAATCGATAAGGCTTTTGGGGA GGAGCTTGAATAGATCACTATCCTAAATCTCGAACTGTGGCTGCATTTTG AATGAAGTGACATCAAAGAATTTAGACGAAGCCCATGAAACGGGAGTAGT GACTAAATGTGGATGGAACCTGGACCTAATTTTGGAATGTTCAGTAAATT GGGGCGAATCCTTATACAATTAATTTGGATTGTATCTCGTCAAACCAGCT TGACATGAAACATTACATCCGCATATAACGTTGAGGATATGAACAAAACT TGTTCATCATGTTTAGGAAGAAATATACTCATTGTAAGTGTGTACTGTAA ATGCTGTCCATGAACCTCTGGCTGTAAGTGTTTTCTTTACAATGCAAAAC AAACACGAAGAGCAAATCCTCATTGAGAACATTGTCCGAGGTGAACTCAT TCAATCATTTCCTATGCCATTCATACTCAAATTACTCGTACTTCCTTTCC TTGTTTTTTTGGTTATTCATTTCAAAGGCTCCATATTTATAGCTCCAAAG GCTGGAAAAGGTTGTTATACTTTCCTCGCCATGAGTCACTCGGAATCAGA AGAAGTGAAAGCCTTGAACACGCAATTGTTGGCCTGGTTAACCCAAACAA TCAATAAGTGTCTGGTAACAATAAATTCTTAACGAGCGTACAATTCCCTT TTTTCAACAATTCAAAAAGCACATTTTTAAAGATATACTCAAGTCCTATC TGGCCACAGTGTTATAAATTATAAGCCCTGAAAATGTCCAAGATTATAGA GGGAACAATTTGTTTAGAATTATAGGATAAGGATGCGTCCGTCCTCTATA ACTAGAAATTAAATACTAAAATTATGGCTAGTTCGCTACAAACCAAATGG CAAAAAGCCCTGAAGACAATTCGCTCTACACCTGTTGCCTTACCAAAGGA ACATTTTGGGCCAAGGAAATAGATCCCACCCTTGGGACCCCAATAGCGAG TTTACTTCTTGGCCTGAGCTAGATCGGTGGGCTCATGTAATATAACCCGG GTCACGGCATTTTTTAAATATGTATTGTAATTGGGTTCGTGTTTAGAAAA ATAGATGTCATTTGACATCATCTGTCACTTTTTGCTTGTTGGTCAACATG CACCTCCTCGAAATCAATGGGATCTATGTTCCAATGTATCAAGCGACTCT TGCGATAGTATGTACATGCATGCATATGGGAGATCTCTGAAATTCCCGAA ATGCAACATGGAAAAGGCCAGAAAAAACGTCTCCCTCTGCGTGGCAGCTT CTAGTATGCACTCAAACAAACCCTGGTGAAATCTTGGGAAACGGCCACTT TGTTCCCTCTTTAGCATTCCACAATTTGTCAGCGTGACAAAGCGACCGAT TGTTCTCAAGAGTCACCGACAATGAATCATTCCAGATTGGAGGCCTCGAT ATGCCGTGGGTCCACCACGACTCTGGGATTCCCCAGGAACTGACCCACCC AAACCCCCAACCTCTGGTTACCCTCACTCTTTTGGCTTTTATTCTCAGTA CGTGATTGTGCCCTATCTGGATGGTCGGTGTGGTCGAGCTGCGATTCGTC TTGTGGTCGCGGAGCCCAAACTCGCTCCCGCCTCATCACTCAGCATCCGT CACCTGGAGGGAAATCTTGCGAGGCTTTGGAACAGAAGAGGAGCTGCTTG GGTGGAAGATGCGACCGAAAATATTGGAAATACAAGAGTCCAATTAGAGG TGAGCAGCAATTGAGGTTGATTTTCCAGATCTGGCAGTAACGACCTGGCG AGCGGGTGGATTTCCCACGAGCCCACTTGGAATCACTCAAGCGAGATGAT TCGATTTGATTCCGCCCTGGCTGTGTCAATATTGTCTGGGACTGTTAGGC CTATTTGGGCTCTCAAGAACTCCAACTAATCATGGTATAATTGCTCAATC AAAAACTTGGAGTGGATAACTTTTCTGCCGTCCTCGTAGTACATGGTCTT CGACAATAGAAGAGCGCTTTCTTGGCGGTGTCTGACTGGGAAAAAAGTGG AACTTTGAGAACAAAGTTCAGGATTTTAGGGATCAATCAGTGGAAAACTT GGCTAAGTAGCTCAGCGGTACAAGACAGCGAGCAGGGGATTAGCATCGAG GTTCGAAACTGATGAATTTTCCTAAGCCGGTTGATGGATTTGTAGAACAT CTTCCTTCATCCTATTTGTCTTCTTAAGTGAATGCTCAATACATTGTCGA GCCCTCTCAGAAGGGTTGATGTGATCTGTGGGAAAGTTGGGCCAATTTCG GACGGATGCCGAGTGGGTCAAAAGTTTTTATCGCCTTCCCTCAGGCGGAG CCGCAATCATTGCAGAAACGAGAGATGTTCCAACCTGGTTCCAACTAGTA GATACAATGTTCTGGTCCAGTAAATAGGTCCTCTGTCTCAAGCCACTTTC CTCGGGTAAATGGAAAGCCGGTCCAAACTTCACTCACCTCTTCCGGCTTC CGGTGTTTGAAAAAAGAGCCACTTTAAACTGAACTACAGAACTTTGGGAC TCATCTAACTTTTAATGTGATCAAGGCCTCATTAGCAACATATAGTCATA TTCAGATCTTGGTTTGTATTTGCATGAACAGGACGCTAAATACTGGGATA ATTCAATTGAGTCACTTCCCTCAAGCATCAACGTTATGACCTTTTGTACT GTACCCTGCTAGTCAACTCATCGAGCATCGTACGTATACTGGTTAAAAGA ATATGATGATCTCTTCATGCTCCCTCAATTCAAACTACGATTACATGATG GCCAATTAGCAATGGGAAGCTGTGCTAGCTTTTCTCATGTTGTTATTCTT CAAGTCCCAATCCCAGCTTACTGGGATATTATGAATGTAGCGTGGTGATT GGGATGTCCTGTTGGGTTTTCAATGGGCTTTTGGGCTCCAACAAACGTTT GAGGTTCCTATCTGAGGTTGGGTTAGATAGTTTATGACGCATCCTGTTAT GCTCCCCATTCATCTCTTAATCAAGCTTGCAAGAGGTTACAACATTTATA TTTCCTTACGGTGTAAATGTCATCGATCCAGGTTTAACCTCGTTCAAAGG CTTGTTTGAGAGTCTTTCAGCAAGAGCTGTCTCCAAGGTTGGAGCGAATA TCCCTTTCACACCCTGGTTACCATTGAAGCTGTAACAGACTGGTTTAAGG TCCTTGTGTTCGTACAACCTTTGAATTGTTCCACGAGGATAAAGTAATTA AAGAAGAATGCGTCGATGGGAGAGTGGTGCAATCAGTCATGTAATTTGAG TAGCATCGGGTTCACGGGTTCGATGCCTACGGACTTGGTGCAGCCAGTCT TGATTGGCTTTTTGCTCGAAAACGTAATATCAGCGTGCTGTATACTGTGT GTCGACTCAATGAGTTGCTGAATACCTCCTGCAGTAATATCTCTGGGTGC AGAAAGTTTAGTTACCATAAACATCGCTTGATCCAACTTGATTGTTTTTC CTCTTCCAGAGACAGCTGGACTTCTGCCCGTGAAATTCTATGAGAAAGTT CTTTCGGCCAAGAAGGATTGGGATGTGCGCGAAAATCTCTTTCTTCACCC CGAGAAGCTGGCGGAGAAGAGCCAGATGAAGAAGTTGTGGAACTCCAAGC ACCAAGCCTTTGGCAACGCCATAGAGGAGGGATACCAAGCCGACCAGCCG AGCGAATCTGCTTCATCGCCTCCCTATATCGACAACGAGACCGATGAGTA GGTTGGCATTCCCGTCAGCAAGTTGTCTCGGTACTTGAGCTAGGGCATGG AACCCCGAGGGATTAGTGCAGAAATGCACTTTGGATTGGGTATCAGTTTC CAAAAGGAGTCGGAGCCGGAACTGGTTGATGATTGTTGGATGGAGGCACC AAATCTAGGGGATATCCTTTGGGTGCCAGTTAGGATTTTAAAGCTGTTCG CAAGTGTGCGAGAGAAATGAAGCAAGAGCCTTAGGGTGTCCGTGTCAAAT TGGGGTTTCGTCGAGGCTCCTTGACCAGAATTGGCTCCTCGATCCCCAGT GTACTTTGGGACATTGGGACCAGGGCCATCACTGAATTGGCCAGGCTGGA AAAGAGCCAAGGGTCTATTCCACCCAAAACACATTCATAGCCCATCCAGT GGTGAGGCTTTGAAATTGAAAAGGGCTCTTTTTGTCCCGCAAATTCTTGA ATATCCCACAAAAAGTTCGAGTCCTTTCAGAGACCCCAAGCCATTCATCA TGTTCCACCGCAGTTTACGAAACACTCACGTTTCTACCGAATGGAAATAG ACGAAGACCCAATACAACATGCGGCTGGCCAAATTAATTGGAGGAATGTG CAAAAACCCGGATGGCTCCATTCAGATGGGAGTGAATTGGCAAAAACGGA CTTTTTACGACGACTTTGATGGACCCCAACGTTTTGTCACCACAGTTGAT TCCTCATAAGCCAAACGTCAATTGTGGGGAAAGAATGGAACTCAATTTAG TGCTTGACATCTATTTGAGAGTGAGCTCTTTGGGCCGGAAAATTGAAGTC TGCTAATTTGGGCTGGAGTCATAAACGCTGAATGGGTTGAATTCGACAAC TCTTTAAGGGAATCTGCCCCCCCCTCCCCCCGCATATAAAAGTGTGTGGT ATCCTCTGGGCCCATCTGGCTCGTGGGTGAAAATCTCCGCCCGAACTAAA GTTGTGCAAATTCCAAGATAACATCATTTTTGGCGACTCCAGGAAAGTGA GACTCGTCAATGCCATGGGTGGAGCTCAACGAGTGAGAATATCGCCCGAA CTTAAGTTAGCTTAAGAAGTTAATAGCCCCGAAACGGGTAGGAGAAACCT ACTTAACGCATGGAGGGTGGGTGGGTTTTTTGTCCCAGAATGGATGATGG TTTCATACGTTGTGTCAAATGCCGAAATTGCGAGTTGGAGACGCGAGGTT TCGTGATTTCTCAAGTGAGCGATGACTTGAAATGTGACAAAGGGAGGAGG ATCGGTCTGCCTTTTTTGTGAATAAGAGAACATGCGTGGGTTCATTTATG AATATGACTTGTCATCGTGATTAATGGTCTTTCTTCTTGTAGGAGCTATT GTACCGTGTTTGAGCTGATAAAAACCACCAAGGCTTGCCACAACGACAAA GACTTCTTCAAAATGCAAAAAGGTACTCCTGATTTTCCTGGCTGGACTCC ATTTGGAAACTGGCTCGAGAATCCCTGATAATTTGGGGTAATAGAGGGCA CTTTGTCCCATATTTGGGCGTTGAGTTCCAATCAAACATTTCTCAGAGTT GGATTAACAAAGGTCAACATTGATGATCTAAAAACCTCATTGATCCTCGA CCTGCACACGCAACAACGTAATCACATCCGGATGTGTGGGCTATTGGAAG CATTACTAATCAGCCCCTTCTAGTCGCGTTGCGTCAGCCCCTAATAATAC AACTCGCGCAATCAAATTGGCATTCAAATTGGTCGCGTAAGAAGCTCTGA TGAACATTCTCAGAATTTCCCCCATTTCCTCGTGGGAGCGCTTTTCTGAC CTTTGGCTCCCTCTTTGACAGGCCGAAGAATGTGCGCCCTCTGCCCCAAG GACGCCAAACGCCAAAGTCTGGGCAATCGCTGCAAAGGCCACGGAGTCGA CTACGAGCTGACCAGATGGCGTTCCACAGTGTTTCCCAAGTGCCACGGTC AATGGCAGAGGATCTACGAGACCCGAGATTGTCCGTGCACAAATGGGGCG GATTTCATTTTCGTGTAGGAGACGATGAGGACGTTGGTGATAAGGTGCCA GCAGCCCTGCCTCATTTATGTGTGGTGCTTATTCATCCCCTCTTCATGTG AGCCCGAGCTGAGCTAGTTTATCACGCCAGTGTATCATGGATTATTTTTA TATTTCATTAATGTGTACATCAATTGAGGACCTGCTTGGGTCTCTGTTCG CGATTGCAGATGCATCTCTCTCATAGCCACATGTGTTCAACAGAGGCGTC CTATAGAGCAACGCG
back to top
Synonyms
The feature 'RPE-spondin' has the following synonyms
Synonym
Tk00891
Add to Basket