estrogen related nuclear partial, maker-scaffold421_size176100-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 85.8853 bits (211), Expect = 1.481e-20 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEG 69 VCGD +SG HYGV +CE CK FF+R+ + Y CP C +++ R CQ CR QKCL +GM ++G Sbjct: 49 VCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 84.3445 bits (207), Expect = 5.095e-20 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRV 75 LVCGD ASG+HY +CE CK FF+R+I N YTC + +CEI+ R+ CQACR +KC GM E V +R Sbjct: 174 LVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERT 248
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 81.6481 bits (200), Expect = 3.705e-19 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVR 76 VCGD A+G HYG +SC+ CK FF+R+++ Y C + C +NK +R C+ CR + C++ GM K V+ +R R Sbjct: 153 VCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDR 227
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 74.7146 bits (182), Expect = 9.743e-17 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNE----CEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 VCGD +SG HYG+ SC+ C FFKR+I YTC A E C I+K R C+ACR +KC M K+ V+ +R Sbjct: 110 VCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHER 186
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 73.559 bits (179), Expect = 2.279e-16 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNE--CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH 94 VC D +SG HYG+ +C+ C FFKR+I+ N Y C A +E C ++K R C+ACR ++C+ +GM K+ V+ + RG R R S Y H Sbjct: 36 VCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHE--RGPRNSTLRRQMSLYFKEH 128
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 73.559 bits (179), Expect = 2.940e-16 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0 Query: 2 VCGDVASG-FHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGM 65 +C D A+ HYG +C +C+AFF+R + N EY C C I K RK CQ CRF KCL GM Sbjct: 65 ICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGM 129
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 73.1738 bits (178), Expect = 3.862e-16 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 2 VCGDVASG-FHYGVSSCEACKAFFKRTIQGNIEYT----CPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ 80 +CG+VA +YG C +C+AFF+R++Q N Y C + +C IN + RKACQ CRFQKC+ GM V DR R ++ Sbjct: 109 ICGEVAGKHVYYGGQCCTSCRAFFRRSVQNN-SYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKK 191
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 69.3218 bits (168), Expect = 1.431e-15 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTI-QGNIEYT--CPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 VC + A+G+H+G +CE CK+FF RT + N+ C + C I+K+ R +C+ACR +KCLR+GM K G R R Sbjct: 40 VCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGR 115
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 71.2478 bits (173), Expect = 1.571e-15 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQG-NIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 VC + A+GFH+G +CE CK+FF RT ++ C + C ++K+ R AC+ACR +KC+ +GM K G R R Sbjct: 59 VCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRYGR 132
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-15 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 2 VCGDVASG-FHYGVSSCEACKAFFKRTIQGNI--EYTCPASNE-CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMI 86 +CG+VA +YG C +C+AFF+R++Q N +++C + E C IN + RK+CQ CRFQKC+ GM V D R R K MI Sbjct: 108 ICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGER--RSKKSAMI 194
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|62286747|sp|Q5RAM2.1|ERR3_PONAB (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.476 bits (563), Expect = 1.825e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 106 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 261
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|50400205|sp|P62510.1|ERR3_RAT (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402102|sp|P62508.1|ERR3_HUMAN RecName: Full=Estrogen-related receptor gamma; AltName: Full=ERR gamma-2; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402103|sp|P62509.1|ERR3_MOUSE RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.09 bits (562), Expect = 4.080e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 129 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 284
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|75063008|sp|Q6QMY5.1|ERR1_CANFA (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 213.386 bits (542), Expect = 1.785e-67 Identity = 107/164 (65.24%), Postives = 121/164 (73.78%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIES---PYGGLHPARKLSLE--------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P+ G PA L++ N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGSFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|1209676900|sp|O95718.3|ERR2_HUMAN (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=ERR beta-2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 211.075 bits (536), Expect = 1.728e-66 Identity = 104/159 (65.41%), Postives = 123/159 (77.36%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P P +P+ K LTTL + DRELV IGWAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|215274146|sp|P11474.3|ERR1_HUMAN (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 207.994 bits (528), Expect = 2.079e-65 Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---------------SPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E + GG RK + N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGG---PRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 244
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119561|sp|P11475.1|ERR2_RAT (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 205.297 bits (521), Expect = 2.496e-64 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P ++P+ K LTTL + DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPDDVPEGDIKALTTLCDLADRELVFLISWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|152032433|sp|Q5QJV7.2|ERR1_RAT (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1 >gi|341941116|sp|O08580.4|ERR1_MOUSE RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 204.527 bits (519), Expect = 4.006e-64 Identity = 105/164 (64.02%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE-SPYGGLHPARKLSLE----------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P P L N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPASPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|408360079|sp|Q61539.2|ERR2_MOUSE (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 200.675 bits (509), Expect = 1.602e-62 Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGL---HPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L E + L A+P ++P+ K LTTL E DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYNCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLNLPISPPAKK---PLTKIVSNLLGVEQDKLYAMPPNDIPEGDIKALTTLCELADRELVFLINWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6015119|sp|Q91250.1|ESR1_TAEGU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 145.591 bits (366), Expect = 1.935e-40 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR---QKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 179 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRVMKQKRQREEQDSRNGEASSTELRAPTLWASPLVVKHNKKNSPALSLTAEQMVSALLEAEPPLVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 354
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119597|sp|P06212.1|ESR1_CHICK (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 144.436 bits (363), Expect = 5.681e-40 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGG---RQKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGG +QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 181 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGEMMKQKRQREEQDSRNGEASSTELRAPTLWTSPLVVKHNKKNSPALSLTAEQMVSALLEAEPPIVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 356
BLAST of estrogen related nuclear partial vs. nr
Match: gi|657600382|gb|AID52852.1| (estrogen related receptor [Tigriopus japonicus]) HSP 1 Score: 321.242 bits (822), Expect = 2.829e-106 Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPAS++CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEF+DRELVGTIGWAK Sbjct: 176 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASSDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFYDRELVGTIGWAK 328
BLAST of estrogen related nuclear partial vs. nr
Match: gi|657600384|gb|AID52853.1| (estrogen related receptor [Tigriopus japonicus]) HSP 1 Score: 322.013 bits (824), Expect = 4.121e-106 Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPAS++CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEF+DRELVGTIGWAK Sbjct: 206 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASSDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFYDRELVGTIGWAK 358
BLAST of estrogen related nuclear partial vs. nr
Match: gi|597711674|gb|AHN16691.1| (putative estrogen related nuclear receptor, partial [Calanus finmarchicus]) HSP 1 Score: 250.751 bits (639), Expect = 3.834e-82 Identity = 115/154 (74.68%), Postives = 137/154 (88.96%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRM-IESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNI+YTCP +N CEINKRRRKACQACR+QKCLR GMLKEGVRLDRVRGGRQKY+R +E+ +G + +RK++LEENK+L +L++CEPE L++L DP+LP KT++TLS+ +DRELVGTIGWAK Sbjct: 3 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIDYTCPVANSCEINKRRRKACQACRYQKCLRQGMLKEGVRLDRVRGGRQKYKRYPMETTHGSVQTSRKITLEENKVLESLSQCEPEQLVSLADPSLPSSALKTVSTLSDIYDRELVGTIGWAK 156
BLAST of estrogen related nuclear partial vs. nr
Match: gi|675378132|gb|KFM71034.1| (Estrogen-related receptor gamma, partial [Stegodyphus mimosarum]) HSP 1 Score: 254.603 bits (649), Expect = 1.719e-80 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +HP +K SLEENK++ AL CEPEPL A +P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 137 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHPVPCKKPSLEENKIIAALVMCEPEPLQAQANPALPESHFKTISTLSDLVDRELVATIGWAK 290
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1355987727|gb|PRD31115.1| (Estrogen-related receptor gamma [Nephila clavipes]) HSP 1 Score: 249.21 bits (635), Expect = 1.961e-80 Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH--PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD ASG+HYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H P +K S+E+NK++ AL CEP+PL ALP+P LP+ + K ++TLS+ DRELV TIGWAK Sbjct: 143 LVCGDTASGYHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRSQESPY-QVHSAPCKKPSIEDNKIITALLNCEPDPLQALPNPALPESELKIVSTLSDLVDRELVSTIGWAK 296
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1009592767|ref|XP_015925326.1| (estrogen-related receptor gamma isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 252.292 bits (643), Expect = 9.886e-80 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H +K SLE+NK++ AL CEPEPL A P+P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 126 LVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHAITCKKPSLEDNKIISALLNCEPEPLQAQPNPALPESHFKTVSTLSDLVDRELVATIGWAK 279
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1009592765|ref|XP_015925325.1| (estrogen-related receptor gamma isoform X1 [Parasteatoda tepidariorum]) HSP 1 Score: 252.292 bits (643), Expect = 1.093e-79 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H +K SLE+NK++ AL CEPEPL A P+P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 135 LVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHAITCKKPSLEDNKIISALLNCEPEPLQAQPNPALPESHFKTVSTLSDLVDRELVATIGWAK 288
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1089676203|gb|AOY10609.1| (estrogen-related receptor [Macrobrachium rosenbergii]) HSP 1 Score: 244.973 bits (624), Expect = 6.435e-77 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH--PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCG++ASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKYRR +SP+ +H P +K SLE+ KLL +L C PE LLA+PDP + D Y T++TL++ +DRELV TIGWAK Sbjct: 128 LVCGNIASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFHKCLRVGMLKEGVRLDRVRGGRQKYRRTSDSPF-SMHQMPVKKASLEDIKLLASLRACVPESLLAMPDPTVSDTDYLTISTLADLYDRELVSTIGWAK 281
BLAST of estrogen related nuclear partial vs. nr
Match: gi|259906648|gb|ACW84414.1| (estrogen receptor-like protein [Teleogryllus emma]) HSP 1 Score: 242.276 bits (617), Expect = 1.270e-76 Identity = 116/155 (74.84%), Postives = 131/155 (84.52%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPY--GGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRR + PY P LSL+ENK+L ALT CEP+ LLA PD ++ D + + ++TLS+ +DRELVG I WAK Sbjct: 72 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRNPDLPYQVQAFMPRPVLSLDENKMLKALTSCEPDLLLASPDTSIVDLELRVVSTLSDLYDRELVGVISWAK 226
BLAST of estrogen related nuclear partial vs. nr
Match: gi|694998544|gb|AIS76179.1| (estrogen-related receptor protein [Portunus trituberculatus]) HSP 1 Score: 243.047 bits (619), Expect = 1.463e-76 Identity = 112/154 (72.73%), Postives = 130/154 (84.42%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH-PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRF KCL +GMLKEGVRLDRVRGGRQKYRR ESP+ P +K+SLE+NKLL +L CEP+ L AL D + D + T++TL++ +DRELV TIGWAK Sbjct: 99 LVCGDIASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFHKCLHVGMLKEGVRLDRVRGGRQKYRRTTESPFSLQQMPVKKVSLEDNKLLKSLISCEPDSLYALSDVTVSDADFHTISTLADLYDRELVSTIGWAK 252 The following BLAST results are available for this feature:
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of estrogen related nuclear partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of estrogen related nuclear partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold421_size176100:2..6526- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold421_size176100-snap-gene-0.27 ID=maker-scaffold421_size176100-snap-gene-0.27|Name=estrogen related nuclear partial|organism=Tigriopus kingsejongensis|type=gene|length=6525bp|location=Sequence derived from alignment at scaffold421_size176100:2..6526- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'estrogen related nuclear partial' has the following synonyms
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