estrogen related nuclear partial, maker-scaffold421_size176100-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 67.3958 bits (163), Expect = 3.691e-14 Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0 Query: 2 VCGDVASG-FHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ--KYRR 84 VCGD A HYG +C +C+AFF+R++ + Y C C I RK CQ CR++KCL GM V + + R KY R Sbjct: 93 VCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVR 178
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 55.0694 bits (131), Expect = 8.415e-10 Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 0 Query: 21 KAFFKRTIQGNIEY-TCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRV 75 + FF+R+IQ I+Y C + +C I + R CQ CR +KC+ GM ++ VR RV Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGRV 72
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000011992 (supercontig:LSalAtl2s:LSalAtl2s854:249810:252054:1 gene:EMLSAG00000011992 transcript:EMLSAT00000011992 description:"maker-LSalAtl2s854-snap-gene-2.33") HSP 1 Score: 52.7582 bits (125), Expect = 1.388e-9 Identity = 35/80 (43.75%), Postives = 41/80 (51.25%), Query Frame = 0 Query: 20 CKAFFKRTIQGNIE--YTCPASNECEIN-------KRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPY 90 CK FFKR+I G E Y C SN+C+I+ KR R CQACR Q CL GM G RV GR + +E Y Sbjct: 3 CKNFFKRSIVGIQEKPYFCKFSNDCDISVFDPDGIKRNRLRCQACRXQACLDAGMFHSGSLQSRV--GRPRKSSRVEPEY 80
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 53.5286 bits (127), Expect = 2.144e-9 Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 Query: 2 VCGDVASGF-HYGVSSCEACKAFFKRTIQGNIE--YTCPASN-----ECEINKRRRKACQACRFQKCLRMGM 65 +CGD+A HYG +C +C+AFF RT+ + + C N +C I K R CQ CR++ CL GM Sbjct: 139 ICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22") HSP 1 Score: 46.9802 bits (110), Expect = 3.655e-7 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0 Query: 32 IEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 ++Y C + C I+ RR CQ+CRF+KCL + M KE V+ +R Sbjct: 2 LDYVCKGNGNCTIDVARRNQCQSCRFKKCLMVKMKKEAVQQER 44
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|62286747|sp|Q5RAM2.1|ERR3_PONAB (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.476 bits (563), Expect = 1.825e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 106 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 261
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|50400205|sp|P62510.1|ERR3_RAT (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402102|sp|P62508.1|ERR3_HUMAN RecName: Full=Estrogen-related receptor gamma; AltName: Full=ERR gamma-2; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402103|sp|P62509.1|ERR3_MOUSE RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.09 bits (562), Expect = 4.080e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 129 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 284
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|75063008|sp|Q6QMY5.1|ERR1_CANFA (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 213.386 bits (542), Expect = 1.785e-67 Identity = 107/164 (65.24%), Postives = 121/164 (73.78%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIES---PYGGLHPARKLSLE--------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P+ G PA L++ N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGSFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|1209676900|sp|O95718.3|ERR2_HUMAN (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=ERR beta-2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 211.075 bits (536), Expect = 1.728e-66 Identity = 104/159 (65.41%), Postives = 123/159 (77.36%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P P +P+ K LTTL + DRELV IGWAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|215274146|sp|P11474.3|ERR1_HUMAN (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 207.994 bits (528), Expect = 2.079e-65 Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---------------SPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E + GG RK + N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGG---PRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 244
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119561|sp|P11475.1|ERR2_RAT (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 205.297 bits (521), Expect = 2.496e-64 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P ++P+ K LTTL + DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPDDVPEGDIKALTTLCDLADRELVFLISWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|152032433|sp|Q5QJV7.2|ERR1_RAT (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1 >gi|341941116|sp|O08580.4|ERR1_MOUSE RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 204.527 bits (519), Expect = 4.006e-64 Identity = 105/164 (64.02%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE-SPYGGLHPARKLSLE----------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P P L N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPASPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|408360079|sp|Q61539.2|ERR2_MOUSE (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 200.675 bits (509), Expect = 1.602e-62 Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGL---HPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L E + L A+P ++P+ K LTTL E DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYNCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLNLPISPPAKK---PLTKIVSNLLGVEQDKLYAMPPNDIPEGDIKALTTLCELADRELVFLINWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6015119|sp|Q91250.1|ESR1_TAEGU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 145.591 bits (366), Expect = 1.935e-40 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR---QKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 179 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRVMKQKRQREEQDSRNGEASSTELRAPTLWASPLVVKHNKKNSPALSLTAEQMVSALLEAEPPLVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 354
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119597|sp|P06212.1|ESR1_CHICK (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 144.436 bits (363), Expect = 5.681e-40 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGG---RQKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGG +QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 181 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGEMMKQKRQREEQDSRNGEASSTELRAPTLWTSPLVVKHNKKNSPALSLTAEQMVSALLEAEPPIVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 356
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017437|ref|XP_022688888.1| (steroid hormone receptor ERR1-like isoform X6 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 1.133e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017430|ref|XP_022688859.1| (steroid hormone receptor ERR1-like isoform X3 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 1.623e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017433|ref|XP_022688873.1| (steroid hormone receptor ERR1-like isoform X4 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 2.063e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 81 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 238
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757735|ref|XP_022662920.1| (steroid hormone receptor ERR1-like isoform X2 [Varroa destructor]) HSP 1 Score: 229.565 bits (584), Expect = 2.868e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 82 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 239
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757711|ref|XP_022662907.1| (steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757713|ref|XP_022662908.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757715|ref|XP_022662909.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757717|ref|XP_022662910.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757719|ref|XP_022662911.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757721|ref|XP_022662912.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757723|ref|XP_022662914.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757725|ref|XP_022662915.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757727|ref|XP_022662916.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757729|ref|XP_022662917.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757731|ref|XP_022662918.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757733|ref|XP_022662919.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1268017416|ref|XP_022688807.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017418|ref|XP_022688814.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017420|ref|XP_022688821.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017422|ref|XP_022688829.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017424|ref|XP_022688832.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017426|ref|XP_022688842.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 6.398e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289 The following BLAST results are available for this feature:
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of estrogen related nuclear partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of estrogen related nuclear partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold421_size176100:2..6526- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold421_size176100-snap-gene-0.27 ID=maker-scaffold421_size176100-snap-gene-0.27|Name=estrogen related nuclear partial|organism=Tigriopus kingsejongensis|type=gene|length=6525bp|location=Sequence derived from alignment at scaffold421_size176100:2..6526- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'estrogen related nuclear partial' has the following synonyms
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