estrogen related nuclear partial, maker-scaffold421_size176100-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 67.3958 bits (163), Expect = 3.691e-14 Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0 Query: 2 VCGDVASG-FHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ--KYRR 84 VCGD A HYG +C +C+AFF+R++ + Y C C I RK CQ CR++KCL GM V + + R KY R Sbjct: 93 VCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVR 178
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 55.0694 bits (131), Expect = 8.415e-10 Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 0 Query: 21 KAFFKRTIQGNIEY-TCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRV 75 + FF+R+IQ I+Y C + +C I + R CQ CR +KC+ GM ++ VR RV Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGRV 72
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000011992 (supercontig:LSalAtl2s:LSalAtl2s854:249810:252054:1 gene:EMLSAG00000011992 transcript:EMLSAT00000011992 description:"maker-LSalAtl2s854-snap-gene-2.33") HSP 1 Score: 52.7582 bits (125), Expect = 1.388e-9 Identity = 35/80 (43.75%), Postives = 41/80 (51.25%), Query Frame = 0 Query: 20 CKAFFKRTIQGNIE--YTCPASNECEIN-------KRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPY 90 CK FFKR+I G E Y C SN+C+I+ KR R CQACR Q CL GM G RV GR + +E Y Sbjct: 3 CKNFFKRSIVGIQEKPYFCKFSNDCDISVFDPDGIKRNRLRCQACRXQACLDAGMFHSGSLQSRV--GRPRKSSRVEPEY 80
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 53.5286 bits (127), Expect = 2.144e-9 Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 Query: 2 VCGDVASGF-HYGVSSCEACKAFFKRTIQGNIE--YTCPASN-----ECEINKRRRKACQACRFQKCLRMGM 65 +CGD+A HYG +C +C+AFF RT+ + + C N +C I K R CQ CR++ CL GM Sbjct: 139 ICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22") HSP 1 Score: 46.9802 bits (110), Expect = 3.655e-7 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0 Query: 32 IEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 ++Y C + C I+ RR CQ+CRF+KCL + M KE V+ +R Sbjct: 2 LDYVCKGNGNCTIDVARRNQCQSCRFKKCLMVKMKKEAVQQER 44
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|55584164|sp|P49884.3|ESR1_BOVIN (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 140.584 bits (353), Expect = 1.715e-38 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G + A LSL ++++ AL EP + + DP P + + L+ DRELV I WAK Sbjct: 188 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAVPSGDMRAANLWPSPIMIKHTKKNSPVLSLTADQMISALLEAEPPIIYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAK 363
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|2500908|sp|Q29040.1|ESR1_PIG (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.813 bits (351), Expect = 3.091e-38 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G + A LSL ++++ AL EP + + DP P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAVPPGDMRSANLWPSPLLIKHTKKNSPVLSLTADQMISALLEAEPPIIYSEYDPTRPLSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119599|sp|P19785.1|ESR1_MOUSE (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.813 bits (351), Expect = 3.318e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 191 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNEMGASGDMRAANLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPMIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 366
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|12230055|sp|Q9QZJ5.1|ESR1_MESAU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 3.455e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNDMGPSGDMRATNLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPLIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|75069755|sp|Q53AD2.1|ESR1_FELCA (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 3.981e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDEGEGRNEVGSSGDVRASNLWPSPLLIKHTKKNSPALSLTADQMVSALLEAEPPIIYSDYDPSRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|544257|sp|P03372.2|ESR1_HUMAN (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 4.273e-38 Identity = 78/177 (44.07%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIESPYG-------------GLHP-----------ARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + G L P + LSL ++++ AL EP L + DP P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRGEVGSAGDMRAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119600|sp|P06211.1|ESR1_RAT (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.043 bits (349), Expect = 4.809e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 192 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNEMGTSGDMRAANLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPLIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 367
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|12230056|sp|Q9TV98.1|ESR1_HORSE (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 138.658 bits (348), Expect = 7.103e-38 Identity = 78/177 (44.07%), Postives = 101/177 (57.06%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G PA LSL +++ AL EP L + D P ++ + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAGPSGDRRPANFWPSPLLIKHTKKISPVLSLTAEQMISALLDAEPPVLYSEYDATRPFNEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6015120|sp|P81559.1|ESR1_XENLA (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 137.887 bits (346), Expect = 1.189e-37 Identity = 77/174 (44.25%), Postives = 102/174 (58.62%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR-QKYRRM--------------IESPYGGLHPARK-------LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R I + ++P+ K LSL +L+ AL E + + D P + +T L+ DRELV I WAK Sbjct: 182 VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRLLKHKRQKEEQEQKNDVDPSEIRTASIWVNPSVKSMKLSPVLSLTAEQLISALMEAEAPIVYSEHDSTKPLSEASMMTLLTNLADRELVHMINWAK 354
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6166156|sp|Q62986.2|ESR2_RAT (RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName: Full=Nuclear receptor subfamily 3 group A member 2) HSP 1 Score: 133.265 bits (334), Expect = 3.711e-36 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVR--------LDRVRGGRQKYRRMIESPYGGLHPARK-----LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G R + R R ++ + ++ G H R +L +L++ L EP P + + P++P + + +L++ D+ELV IGWAK Sbjct: 151 VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCLSKAKRNGGHAPRVKELLLSTLSPEQLVLTLLEAEP-PNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAK 314
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017437|ref|XP_022688888.1| (steroid hormone receptor ERR1-like isoform X6 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 1.133e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017430|ref|XP_022688859.1| (steroid hormone receptor ERR1-like isoform X3 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 1.623e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017433|ref|XP_022688873.1| (steroid hormone receptor ERR1-like isoform X4 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 2.063e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 81 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 238
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757735|ref|XP_022662920.1| (steroid hormone receptor ERR1-like isoform X2 [Varroa destructor]) HSP 1 Score: 229.565 bits (584), Expect = 2.868e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 82 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 239
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757711|ref|XP_022662907.1| (steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757713|ref|XP_022662908.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757715|ref|XP_022662909.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757717|ref|XP_022662910.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757719|ref|XP_022662911.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757721|ref|XP_022662912.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757723|ref|XP_022662914.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757725|ref|XP_022662915.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757727|ref|XP_022662916.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757729|ref|XP_022662917.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757731|ref|XP_022662918.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757733|ref|XP_022662919.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1268017416|ref|XP_022688807.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017418|ref|XP_022688814.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017420|ref|XP_022688821.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017422|ref|XP_022688829.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017424|ref|XP_022688832.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017426|ref|XP_022688842.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 6.398e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289 The following BLAST results are available for this feature:
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of estrogen related nuclear partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of estrogen related nuclear partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold421_size176100:2..6526- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold421_size176100-snap-gene-0.27 ID=maker-scaffold421_size176100-snap-gene-0.27|Name=estrogen related nuclear partial|organism=Tigriopus kingsejongensis|type=gene|length=6525bp|location=Sequence derived from alignment at scaffold421_size176100:2..6526- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'estrogen related nuclear partial' has the following synonyms
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