c-type lectin precursor, maker-scaffold424_size175595-snap-gene-0.28 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of c-type lectin precursor vs. L. salmonis genes
Match: EMLSAG00000009572 (supercontig:LSalAtl2s:LSalAtl2s616:111240:140804:-1 gene:EMLSAG00000009572 transcript:EMLSAT00000009572 description:"maker-LSalAtl2s616-augustus-gene-1.39") HSP 1 Score: 77.0258 bits (188), Expect = 4.517e-16 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0 Query: 130 GAILSQIHKLTTDRKLHYSWRDNPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSIS 232 G L + L+TD +L + ++ W R YC+ RCMDLVS +T E + ++S + +K+ WT GR C++ GCD+P F P NGWFW +++ +S Sbjct: 419 GGHLYWVSWLSTDPQLRNT-------NWDWFNARNYCRKRCMDLVSFETREEYEFIKSQMGG--VKYFWTSGRLCDFDGCDRPDFFPKQINGWFWSANQARLS 512
BLAST of c-type lectin precursor vs. L. salmonis genes
Match: EMLSAG00000006192 (supercontig:LSalAtl2s:LSalAtl2s338:64951:65840:1 gene:EMLSAG00000006192 transcript:EMLSAT00000006192 description:"maker-LSalAtl2s338-augustus-gene-0.3") HSP 1 Score: 71.2478 bits (173), Expect = 5.991e-16 Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 0 Query: 171 MDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 299 M +S+D+ + + ++ WTGG K N+R + W + + S + PF W P G PQPDNRE +E C+AVLNN Y DGIK+HD++CH K ICE+ Sbjct: 1 MKAISLDSNAKAEETFRLLAKDTQRYYWTGG-KVNHR-----------DQSVTWPNGQTSRNIPF---------WSPTGARRVPQPDNRE-----GNEFCLAVLNNFYSDGIKYHDVSCHHVKPTICEA 103
BLAST of c-type lectin precursor vs. L. salmonis genes
Match: EMLSAG00000004246 (supercontig:LSalAtl2s:LSalAtl2s222:41948:42649:-1 gene:EMLSAG00000004246 transcript:EMLSAT00000004246 description:"maker-LSalAtl2s222-augustus-gene-0.18") HSP 1 Score: 73.1738 bits (178), Expect = 1.318e-15 Identity = 48/151 (31.79%), Postives = 73/151 (48.34%), Query Frame = 0 Query: 148 SWRDNPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 298 SWRD + G YC+ + M L+S+D+ + +++E I++ WTGG +G ENG ++ IS R + + G RG PQPD E C+A+L N+Y DG+K+HD+ CH +K +ICE Sbjct: 85 SWRDG-RSSLDHSAGSSYCRGKGMRLISLDSSSKINHFFNLLQNERIEYFWTGGSISRDKGT------LTWENG-----QREGIS----RGVFPWSDKGRRG----PQPDGVN------SENCLAILKNVYNDGVKFHDVGCHFQKPVICE 209
BLAST of c-type lectin precursor vs. L. salmonis genes
Match: EMLSAG00000007572 (supercontig:LSalAtl2s:LSalAtl2s437:165026:167321:1 gene:EMLSAG00000007572 transcript:EMLSAT00000007572 description:"maker-LSalAtl2s437-augustus-gene-1.21") HSP 1 Score: 72.7886 bits (177), Expect = 1.608e-15 Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = 0 Query: 152 NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGK----PQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 298 N + F+ Q +YC+ +S+DT + V + ++IWTGGR I + V+ +S + R W GG + PQPDNR+ +E C+AVLNN Y DG+KWHD+ C +K ICE Sbjct: 73 NDCKSFTAQQADEYCQGNGGKTISLDTTDKGNFVNQLMVKYAQRYIWTGGR---------------INHARSTVTWPSGLSEGYTRGKRF---WSHTGGSSRSVDIPQPDNRD-----GNEVCLAVLNNFYADGVKWHDVGCTHKKPTICE 200
BLAST of c-type lectin precursor vs. SwissProt
Match: gi|81170644|sp|Q6DCX5.1|PCFT_XENLA (RecName: Full=Proton-coupled folate transporter; AltName: Full=Heme carrier protein 1; AltName: Full=PCFT/HCP1; AltName: Full=Solute carrier family 46 member 1) HSP 1 Score: 63.1586 bits (152), Expect = 5.383e-10 Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 0 Query: 23 RRVLRLWHKITIEPAVFLFTFAYGFHNIIAQNLLIEKV-CHVNLNLSSEVCAHLEHHKE---DQIAIQRTVALISLYTNIASSIPSLFLPLFLGPWSDRHGRKPLLIFPILG-AILSQIHKLTTDRKLHYSW 149 RR L L +T+EP +FL FA +A L +++ + N + V + K +Q ++ A SLY N+ + LF + LGPWSD+ GR+P+L+ P +G A+ + ++ L ++LH + Sbjct: 17 RRCL-LPASVTVEPVIFLSMFALALQGPLATQYLWDRLSADIGFNGTRTVGCAMNGSKSAGPEQQEVETLTAHWSLYINLGGFLVGLFSVMLLGPWSDKVGRRPVLMLPCIGLALQAAVYLLVMYQELHVGY 147
BLAST of c-type lectin precursor vs. SwissProt
Match: gi|81170641|sp|Q7ZWG6.1|PCFT_DANRE (RecName: Full=Proton-coupled folate transporter; AltName: Full=Heme carrier protein 1; AltName: Full=PCFT/HCP1; AltName: Full=Solute carrier family 46 member 1) HSP 1 Score: 54.6842 bits (130), Expect = 3.271e-7 Identity = 37/122 (30.33%), Postives = 58/122 (47.54%), Query Frame = 0 Query: 31 KITIEPAVFLFTFAYGFHNIIAQNLLIEKVCH-VNLN-LSSEVCAHLEHHKEDQIAIQRTVALISLYTNIASSIPSLFLPLFLGPWSDRHGRKPLLIFPILG-AILSQIHKLTTDRKLHYSW 149 +T+EP +FL TF+ + L +++ V N + C H Q ++ A SLY N+ + LF+ + LG WSDR GR+ +LI P LG A+ + ++ KL W Sbjct: 42 SVTVEPVMFLSTFSIVLQAPLCTQYLWDRLSEDVGYNGTKTGGCNASTVHDPLQTEVETLTAHWSLYINLGGFLVGLFMVILLGSWSDRAGRRLVLIIPSLGLAVQAAVYLTVMYLKLPVFW 163
BLAST of c-type lectin precursor vs. nr
Match: gi|1325290130|ref|XP_023329619.1| (uncharacterized protein LOC111702233 isoform X1 [Eurytemora affinis]) HSP 1 Score: 168.703 bits (426), Expect = 5.557e-48 Identity = 76/167 (45.51%), Postives = 105/167 (62.87%), Query Frame = 0 Query: 136 IHKLTTDRKLHYSWRDNPDR-DFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 IH + H+SW + + + W R YC+ CMD +SID+ V + ++ EDI +IWTGGRKCN+ GCD+P QPAIENGW+W S+ I +P C +C+W GGL QPDNRE+ G+DEAC+ +LNN Y+DG+KWHD+ C +K +IC+ D Sbjct: 35 IHADRFGKAYHFSWLEAGEHTKWDWEGARNYCRKFCMDSISIDSRPESDWVNTLLQREDIPYIWTGGRKCNFAGCDRPDLQPAIENGWYWASTGSRIPSP---KKCRYCDWSHTGGLKTNQPDNREMKQGGKDEACIGILNNFYEDGVKWHDVECRHKKPVICQDSD 198
BLAST of c-type lectin precursor vs. nr
Match: gi|1325290137|ref|XP_023329620.1| (uncharacterized protein LOC111702233 isoform X2 [Eurytemora affinis]) HSP 1 Score: 159.458 bits (402), Expect = 4.712e-45 Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0 Query: 165 YCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 YC+ CMD +SID+ V + ++ EDI +IWTGGRKCN+ GCD+P QPAIENGW+W S+ I +P C +C+W GGL QPDNRE+ G+DEAC+ +LNN Y+DG+KWHD+ C +K +IC+ D Sbjct: 16 YCRKFCMDSISIDSRPESDWVNTLLQREDIPYIWTGGRKCNFAGCDRPDLQPAIENGWYWASTGSRIPSP---KKCRYCDWSHTGGLKTNQPDNREMKQGGKDEACIGILNNFYEDGVKWHDVECRHKKPVICQDSD 149
BLAST of c-type lectin precursor vs. nr
Match: gi|998516141|ref|XP_015518838.1| (PREDICTED: uncharacterized protein LOC107223617 [Neodiprion lecontei]) HSP 1 Score: 160.614 bits (405), Expect = 1.159e-44 Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 0 Query: 136 IHKLTTDRKLHYSWRDN--PDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 IH+ + ++SW D+ ++ W R +C+ RCMDLVS++T ++S + +IK+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W P GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 40 IHERFNGKGYYFSWADSRTAGQEIDWLAARNFCRQRCMDLVSLETSAENEFIKSRIVQNNIKYIWTSGRLCDFKGCDRPDLQPPNINGWFWTAELQKLAPTTDRNQ---NDWSPSGGIGKPQPDNREALQGGAPENCLAVLNQFYNDGVNWHDVACHHKKSWVCEEND 204
BLAST of c-type lectin precursor vs. nr
Match: gi|665809605|ref|XP_008553179.1| (PREDICTED: uncharacterized protein LOC103575248 [Microplitis demolitor]) HSP 1 Score: 160.229 bits (404), Expect = 1.744e-44 Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = 0 Query: 136 IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 IH+ + +YSW D ++ W GR +C+ RCMDL+S++TY+ ++S + +K+IWT GR C++ GCD+P QP NGWFW + + ++ DR +W GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 40 IHERFNGKGYYYSWADPRTAGQEVDWLSGRNFCRQRCMDLISLETYKENEFIKSRIVQNKVKYIWTSGRLCDFNGCDRPDLQPLNINGWFWTAELQKLAPTTDRNQ---NDWSESGGIGKPQPDNREAIQGGAPENCLAVLNQFYNDGVNWHDVACHHKKPWVCEEND 204
BLAST of c-type lectin precursor vs. nr
Match: gi|817059419|ref|XP_012251217.1| (uncharacterized protein LOC105683288 isoform X1 [Athalia rosae]) HSP 1 Score: 160.229 bits (404), Expect = 1.860e-44 Identity = 73/180 (40.56%), Postives = 108/180 (60.00%), Query Frame = 0 Query: 124 LIFPILGAILSQ--IHKLTTDRKLHYSWRDN--PDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 299 ++ P + A+ +Q IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S + ++K+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W P GG+G+PQPDNRE G E C+AVLN Y DG+ WHD+ACH K +CE Sbjct: 26 ILEPPVPALCAQRVIHERFNGKGYYYSWADQRTNGKEVDWLAGRNFCRQRCMDLVSLETSPENEFIKSRIVKNNVKYIWTSGRLCDFKGCDRPDLQPLKVNGWFWTAELQKLAPTIDREQ---NDWSPSGGIGQPQPDNREALQGGAPENCLAVLNQFYNDGVNWHDVACHHVKPWVCEE 202
BLAST of c-type lectin precursor vs. nr
Match: gi|954571968|ref|XP_014610209.1| (PREDICTED: uncharacterized protein LOC106790056 [Polistes canadensis]) HSP 1 Score: 159.844 bits (403), Expect = 2.513e-44 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 0 Query: 102 IPSLFLPLFLGPWSDRHGRKPL--LIFPILGAILSQ--IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 I L L F+ S + +P ++ P + A+ +Q IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S + +K+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 2 IKFLLLGAFVALTSAQFQPQPTGRILEPPIPALCAQRTIHERFNGKGYYYSWADPRTNGQEVDWLAGRNFCRQRCMDLVSLETSAENEFIKSRIVQNKVKYIWTSGRLCDFKGCDRPDLQPLHINGWFWTAELQKLAPTNDRNQ---NDWSESGGIGKPQPDNREAIQGGAPENCLAVLNQFYNDGVNWHDVACHHKKPWVCEEND 204
BLAST of c-type lectin precursor vs. nr
Match: gi|1000730009|ref|XP_015587426.1| (PREDICTED: uncharacterized protein LOC107264071 [Cephus cinctus]) HSP 1 Score: 159.458 bits (402), Expect = 3.116e-44 Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 0 Query: 124 LIFPILGAILSQ--IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 ++ P + A+ +Q IH+ + ++SW + ++ W GR +C+ RCMDLVS++T ++S + +K+IWT GR C+++GCD+P QP NGWFW + + ++ DRT +W GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 26 ILEPPVPALCAQRTIHERFNGKGYYFSWAEPRTSGQEMDWLAGRNFCRQRCMDLVSLETSAENEFIKSRIVQNKVKYIWTSGRLCDFKGCDRPDLQPLNVNGWFWTAELQKLAPTTDRTQ---NDWSESGGIGKPQPDNREAIQGGAPENCLAVLNQFYNDGVNWHDVACHHKKPWVCEEND 204
BLAST of c-type lectin precursor vs. nr
Match: gi|817210128|ref|XP_012281137.1| (uncharacterized protein LOC105700113 [Orussus abietinus]) HSP 1 Score: 159.844 bits (403), Expect = 3.337e-44 Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = 0 Query: 124 LIFPILGAILSQ--IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 ++ P + A+ +Q IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S V +K+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W GG+GKPQPDNRE G E C+A+LN Y DG+ WHD+ACH +K +CE D Sbjct: 38 ILEPPVPALCAQRVIHERFNGKGYYYSWADPRTSGQEVDWLAGRNFCRQRCMDLVSLETSAENEFIKSRVVQNKVKYIWTSGRLCDFKGCDRPDLQPLNVNGWFWTAELQKLAPTTDRNQ---NDWSESGGIGKPQPDNREAIQGGAPENCLALLNQFYNDGVNWHDVACHHKKPWVCEEND 216
BLAST of c-type lectin precursor vs. nr
Match: gi|766920998|ref|XP_011504995.1| (PREDICTED: uncharacterized protein LOC105367862 [Ceratosolen solmsi marchali]) HSP 1 Score: 158.688 bits (400), Expect = 5.141e-44 Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = 0 Query: 136 IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 301 IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S + +K+IWT GR C+++GCD+P QP NGWFW + + ++ DR+ +W GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 38 IHERFNGKGYYYSWADPRTAGQEVDWLTGRNFCRQRCMDLVSLETSAENEFIKSRIVRNKVKYIWTSGRLCDFKGCDRPDLQPLQVNGWFWTAELQKLAPTTDRSQ---NDWSENGGIGKPQPDNREAIQGGAPENCLAVLNQFYNDGVNWHDVACHHKKPWVCEEND 202
BLAST of c-type lectin precursor vs. nr
Match: gi|1183212635|ref|XP_020706519.1| (uncharacterized protein LOC105683288 isoform X2 [Athalia rosae]) HSP 1 Score: 157.918 bits (398), Expect = 5.326e-44 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 0 Query: 136 IHKLTTDRKLHYSWRDN--PDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 299 IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S + ++K+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W P GG+G+PQPDNRE G E C+AVLN Y DG+ WHD+ACH K +CE Sbjct: 7 IHERFNGKGYYYSWADQRTNGKEVDWLAGRNFCRQRCMDLVSLETSPENEFIKSRIVKNNVKYIWTSGRLCDFKGCDRPDLQPLKVNGWFWTAELQKLAPTIDREQ---NDWSPSGGIGQPQPDNREALQGGAPENCLAVLNQFYNDGVNWHDVACHHVKPWVCEE 169 The following BLAST results are available for this feature:
BLAST of c-type lectin precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 14
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BLAST of c-type lectin precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of c-type lectin precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold424_size175595:153531..155589- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold424_size175595-snap-gene-0.28 ID=maker-scaffold424_size175595-snap-gene-0.28|Name=c-type lectin precursor|organism=Tigriopus kingsejongensis|type=gene|length=2059bp|location=Sequence derived from alignment at scaffold424_size175595:153531..155589- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'c-type lectin precursor' has the following synonyms
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