sodium potassium-transporting atpase subunit beta, maker-scaffold426_size175065-snap-gene-0.40 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sodium potassium-transporting atpase subunit beta vs. L. salmonis genes
Match: EMLSAG00000011366 (supercontig:LSalAtl2s:LSalAtl2s785:16987:18856:1 gene:EMLSAG00000011366 transcript:EMLSAT00000011366 description:"maker-LSalAtl2s785-snap-gene-0.22") HSP 1 Score: 72.4034 bits (176), Expect = 2.503e-16 Identity = 51/146 (34.93%), Postives = 73/146 (50.00%), Query Frame = 0 Query: 3 QYQTEELLSTSFKDS-KTSV----NRALLDLVTELRKWLAYALFQLTFIVALTLFFTIYLIMVMHFMDPFQPKVRRGKI---AQPGMGFRP--KPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKY--GGFGKEVGPSIVCNWNT 136 Q+ E+ LS S+K+S KT + NR +L L W L+ F + T FTI L +D PK++ + PG+GFRP K NP+S+LIHF HG +G W E+L +FLK+Y G + C+W + Sbjct: 6 QFAEEDRLSVSYKNSFKTYLYNPYNRDILG--RSLLSWAKVLLYSFLFSIFTTFIFTISLWTFYQTLDSHTPKLQLNSSFIGSNPGLGFRPLLKDTNPYSSLIHFIHGGSGTWGDLTENLIDFLKQYDPGHWANAGTSQTKCHWTS 149
BLAST of sodium potassium-transporting atpase subunit beta vs. SwissProt
Match: gi|114389|sp|P25169.1|AT1B1_ARTSF (RecName: Full=Sodium/potassium-transporting ATPase subunit beta; AltName: Full=Sodium/potassium-dependent ATPase beta subunit) HSP 1 Score: 60.077 bits (144), Expect = 4.243e-10 Identity = 37/116 (31.90%), Postives = 54/116 (46.55%), Query Frame = 0 Query: 35 WLAYALFQLTFIVALTLFFTIYLIMVMHFMDPFQPKVRRGKI---AQPGMGFRPKPDNPH--STLIHFQHGSNGNWKYYKESLNEFLKKYGGFGKEVGPSIVCNWNTTLDEVERCH 145 W +F + F L FF L++ +D PK + A PG+GFRP P STLI F+HG G+W+Y+ SL EFL+ Y C+++ E + C+ Sbjct: 43 WAKITIFYVIFYTLLAGFFAGMLMIFYQTLDFKIPKWQNKDSLIGANPGLGFRPMPPEAQVDSTLIQFKHGIKGDWQYWVHSLTEFLEPYETLTSSGQEFTNCDFDKPPQEGKACN 158
BLAST of sodium potassium-transporting atpase subunit beta vs. SwissProt
Match: gi|1168551|sp|P43002.1|AT1B2_RHIMB (RecName: Full=Sodium/potassium-transporting ATPase subunit beta-2; AltName: Full=Beta-B1 chain; AltName: Full=Sodium/potassium-dependent ATPase beta-2 subunit) HSP 1 Score: 55.0694 bits (131), Expect = 2.072e-8 Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0 Query: 35 WLAYALFQLTFIVALTLFFTIYLIMVMHFMDPFQPKVRRGKIAQPGMGFRPKPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKY 119 W LF + F LT F++ L +++ +D + PK ++A PG+ RPK D + +++ +G NG W+ Y ++LN LK Y Sbjct: 37 WALILLFYVVFYAFLTAVFSLSLWVMLQTIDEYTPKYA-DRLANPGLMIRPKMDT--TEVVYSTNGMNGTWQAYVDNLNSLLKDY 118
BLAST of sodium potassium-transporting atpase subunit beta vs. SwissProt
Match: gi|12643737|sp|Q24048.2|ATPB2_DROME (RecName: Full=Sodium/potassium-transporting ATPase subunit beta-2; AltName: Full=Protein nervana 2; AltName: Full=Sodium/potassium-dependent ATPase subunit beta-2) HSP 1 Score: 53.9138 bits (128), Expect = 5.743e-8 Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 32 LRKWLAYALFQLTFIVALTLFFTIYLIMVMHFMDPFQPK--VRRGKIA-QPGMGFRPKP--DNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYG--GFGKEVGPSIV-CNWNTTLDEVERCHVPFRKYWNP 154 + W +F + F L I + +DP PK + R I PG+GFRP P DN STLI ++ + N+K++ +SL++FL Y G G +I C++N + + C V K W+P Sbjct: 45 MDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCDYNQPPPKGQVCDVDI-KTWSP 174
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Match: gi|1209695522|gb|OWR48236.1| (sodium/potassium-transporting ATPase subunit beta-2 like protein [Danaus plexippus plexippus]) HSP 1 Score: 59.6918 bits (143), Expect = 1.840e-7 Identity = 40/130 (30.77%), Postives = 63/130 (48.46%), Query Frame = 0 Query: 35 WLAYALFQLTFIVALTLFFTIYL-IMVMHFMDPFQPKVRR--GKI-AQPGMGFRPKPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYGGFGKEVGPS---IVCNWNTTLDEVERCHVPFRKYWNPGFD 157 W LF + F L F + L + HF++P P++++ G I + PG+GFRP P + STLI ++ ++KY+++ L EFL Y G+ G C++ + C V R W P D Sbjct: 44 WGKIILFYVIFYAVLIALFAVCLATFLQHFINPRVPRLQQEQGSIGSSPGLGFRPLPPDVRSTLIWYKGTGEESYKYWEDELKEFLSVYKKKGQTAGAGQNIFNCDFRNPPPPGKVCDVDIRG-WEPCID 172
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Match: gi|943956134|ref|XP_014360957.1| (PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Papilio machaon]) HSP 1 Score: 58.151 bits (139), Expect = 2.417e-7 Identity = 48/152 (31.58%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 10 LSTSFKDSKTSVNRALLDLVTELRKWLAYALFQLTFIVALTLFFTIYLIMVM-HFMDPFQPKVR--RGKIA-QPGMGFRPKPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYGGFGKEVGPS---IVCNWNTTLDEVERCHVPFRKYWNP 154 +S F DS T A L E W LF + F L F I ++ F++P P+++ RG I PG+GFRP P + STLI ++ S ++KY+++ L +FLK Y G+ G C + + + C V R W P Sbjct: 25 VSNFFYDSNTG---AFLGRTAE--SWCKIILFYVIFYAVLGALFMICMVTFKEQFINPRVPRLQQDRGLIGTSPGLGFRPLPPDVRSTLIWYKGTSYESYKYWEDELIKFLKVYKMKGQTAGAGQNIFNCGFRSPPPPGKVCDVDMRA-WEP 170
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Match: gi|930662820|gb|KPJ04531.1| (Sodium/potassium-transporting ATPase subunit beta-2 [Papilio xuthus]) HSP 1 Score: 58.9214 bits (141), Expect = 3.015e-7 Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 10 LSTSFKDSKTSVNRALLDLVTELRKWLAYALFQLTFIVALTLFFTIYLIMVM-HFMDPFQPKVR--RGKIA-QPGMGFRPKPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYGGFGKEVGPS---IVCNWNTTLDEVERCHVPFRKYWNP 154 +S F DS T A L E W LF + F L F I ++ F++P P+++ RG I PG+GFRP P + STLI ++ S ++KY+++ L EFLK Y G+ G C + + + C V R W P Sbjct: 25 VSNFFYDSNTG---AFLGRTAE--SWGKIILFYIIFYAVLGALFMICMVTFKEQFINPRVPRLQQDRGLIGTSPGLGFRPLPPDVRSTLIWYKGTSYESYKYWEDELIEFLKVYKMKGQTAGAGQNIFNCGFRSPPPPGKVCDVDIRA-WEP 170
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Match: gi|910355545|ref|XP_013181464.1| (PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Papilio xuthus] >gi|930656156|gb|KPI98482.1| Sodium/potassium-transporting ATPase subunit beta-2 [Papilio xuthus]) HSP 1 Score: 58.9214 bits (141), Expect = 3.174e-7 Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 10 LSTSFKDSKTSVNRALLDLVTELRKWLAYALFQLTFIVALTLFFTIYLIMVM-HFMDPFQPKVR--RGKIA-QPGMGFRPKPDNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYGGFGKEVGPS---IVCNWNTTLDEVERCHVPFRKYWNP 154 +S F DS T A L E W LF + F L F I ++ F++P P+++ RG I PG+GFRP P + STLI ++ S ++KY+++ L EFLK Y G+ G C + + + C V R W P Sbjct: 25 VSNFFYDSNTG---AFLGRTAE--SWGKIILFYIIFYAVLGALFMICMVTFKEQFINPRVPRLQQDRGLIGTSPGLGFRPLPPDVRSTLIWYKGTSYESYKYWEDELIEFLKVYKMKGQTAGAGQNIFNCGFRSPPPPGKVCDVDIRA-WEP 170
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Match: gi|332183191|gb|AEE25938.1| (sodium potassium-transporting ATPase subunit beta [Litopenaeus vannamei]) HSP 1 Score: 58.5362 bits (140), Expect = 3.894e-7 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 35 WLAYALFQLTFIVALTLFFTIYLIMVMHFMDPFQ-PKVRRGK----IAQPGMGFRPKP--DNPHSTLIHFQHGSNGNWKYYKESLNEFLKKYGG 121 WL +F L F L FF I + + +D PK G+ + P MGFRP P +N STL+ +++G + + +++ ESLNEF+K Y G Sbjct: 35 WLKIGVFYLIFYACLAGFFAIMMAIFYQTLDVNHLPKYTPGRGDSILKNPAMGFRPLPRAENVESTLVWYKNGDSADIQHWVESLNEFIKPYEG 128 The following BLAST results are available for this feature:
BLAST of sodium potassium-transporting atpase subunit beta vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of sodium potassium-transporting atpase subunit beta vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of sodium potassium-transporting atpase subunit beta vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold426_size175065:26567..33129- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold426_size175065-snap-gene-0.40 ID=maker-scaffold426_size175065-snap-gene-0.40|Name=sodium potassium-transporting atpase subunit beta|organism=Tigriopus kingsejongensis|type=gene|length=6563bp|location=Sequence derived from alignment at scaffold426_size175065:26567..33129- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sodium potassium-transporting atpase subunit beta' has the following synonyms
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