e3 ubiquitin-protein ligase ari7, maker-scaffold429_size173697-snap-gene-0.33 (gene) Tigriopus kingsejongensis

Overview
Namee3 ubiquitin-protein ligase ari7
Unique Namemaker-scaffold429_size173697-snap-gene-0.33
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of e3 ubiquitin-protein ligase ari7 vs. L. salmonis genes
Match: EMLSAG00000012797 (supercontig:LSalAtl2s:LSalAtl2s972:51702:82543:1 gene:EMLSAG00000012797 transcript:EMLSAT00000012797 description:"maker-LSalAtl2s972-augustus-gene-0.12")

HSP 1 Score: 204.912 bits (520), Expect = 1.604e-54
Identity = 182/638 (28.53%), Postives = 300/638 (47.02%), Query Frame = 0 
Query:  279 FLNLRIKQIESLLLAKDYHRASVYAHALLNWMTVHKARNVVGYYASYHSDSYSLLQILMGEAEIALGDIHRAIDKCSV--AIRNFCKLKSTVALERSIYSIRQNFYEKLIEVYEKGGNLKDVPANRTKANIIVDPSQKKGF-IDGQFILNDLVSALRIAKNGDTIFLEEGTYTTANVAGGGQDSTMEDHQSKKVPFEIRKAVCIIGCSASKCIISGSLVKWGSTAVL-LKRLKLEV-GLDIDS---------NEDIYFMDGITCLEDCIIESPVNTCMYVISPNFATETSVRFRHCIFDGLGNCKRMICFQGPRPQISIDSCCVNDMYSFVTVI-YPDERTSAILTVTDSVFYDLQDGLKIIVHHESNLVASLIGCQFDLIKYDSDCPSHGFSMTGGTAQ-IQGNMIYCSHLDSIGFSLHSLRRLDIDMNLIETGQEHPRALSTGQGVVLSDNLN-VNLASTEVIGLRIGFQMSNQFDEM--NNIILRDCSAKQCSLGVFVKNAHPDKKGNSHHPVNQEITLYQCHFDACYYAFMCD-----DHQSKIDVINCSFYDIPKPILSVKASLFNLNLRGNEYKLSRDFHIDGFVRNDDEHEIEVSSDECEK-LRQQMYLYFAAKENLPHRMAIDMKYFQLI 891
            F+   +  I+ L+ A+ + +A  +++ +L  +   ++   +        + YS +  L   A + L    +AI +CS      N  +LK  +A +R  Y +     E    ++++G + K       +A +IVDP   KG     QF++NDL +AL+IA++ D I+LE G Y  +              +S K   +I+K+V IIG S S   I GS+VKW S   L L  L++EV G ++D          +EDIY + G T +  CIIES  NT +YVI  N  T T +     IFDGL  C+RMIC +G R ++  ++C  +D  SF+T I + D          DS F  +QD + I     SN   ++ GC F+L ++D +  S G  +  G    I+GN+ Y + LDS    L  +R   I++N IE+  +  R  S  +G+ + + ++ V L +  V G RIG+  S+   E   N   L +C A  CS+G+  +         S  P  + + ++        Y  M +     + +SK+ +   +  D+P P L  K  +  + +  N +  + D+                S D  +  LR +M+ Y A  +NLP+R+A +   + +I
Sbjct:    5 FITWILDHIKGLIDAQYFTQALDHSNVVLKSIMQKESEKTL-------DEHYSXVXFLQNXAILHLEPYSKAI-QCSSFKEASNITQLK-LIAEDRP-YFLPDFLDEDNSLIFDEGNDYK------IRAKVIVDPHGTKGVNSTKQFVVNDLQTALKIAQDSDVIYLERGDYDCSK-------------KSNKT-LQIKKSVSIIGSSKSDVKICGSIVKWESCKKLYLSNLQIEVNGSNLDERAEPVQNGISEDIYLLGGRTEINGCIIESSANTSLYVIGNNENT-TELHVTFSIFDGLEECQRMICPKGSRIRMEFENCYASDSLSFITFIDHDDSHQDCSYFFIDSTFSHIQDAIHISPMKTSNFSLNISGCLFELSQWDEEVKSVGVHLESGNGICIKGNVFYLNSLDSSAIYLKDVRYGLIELNHIESTSDAIRTTSIAEGIAVHNFIDEVRLNNNIVNGARIGYHFSSSNIEKGPNLFSLSNCEASFCSVGLLFELKQ------SQLP--RSLCIHSLKLSNSNYGLMMNTEFTHNDESKVQISGSTINDVPIPFLFHKKFIDRVRMIDNSFTHTLDYE---------------SMDPADADLRTKMFFYLATVKNLPYRVAFERDDYVII 588
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BLAST of e3 ubiquitin-protein ligase ari7 vs. nr
Match: gi|1325332720|ref|XP_023348213.1| (uncharacterized protein LOC111716935 [Eurytemora affinis])

HSP 1 Score: 114.39 bits (285), Expect = 7.383e-23
Identity = 81/331 (24.47%), Postives = 162/331 (48.94%), Query Frame = 0 
Query:  365 KSTVALERSIYSIRQNFYEKLIEVYEKGGNLKDVPANRT---------KANIIVDPSQKKGFIDGQFILNDLVSALRIAKNGDTIFLEEGTYTTANVAGGGQD-STMEDHQSKKVPFEIRKAVCIIGCSASKCIISGSL--VKWGSTAVLLKRLKLEVGLDIDSNEDIYFMDGITCLEDCIIESPVNTCMYVISPNFATETSVRFRHCIFDGLGNCKRMICF-QGPRPQISIDSCCVNDMYSFVTVIYPDERTSAILTVTDSVFYDLQDGLKIIVHHESNLVASLIGCQFDLIKYDSDCPSHGFSMTGGT-AQIQGNMIYCSHLDSIGFSL 681
            KS +    +I+  R + + K +E  + G N + +    T         K  ++VD S K+ + +G   +NDL + L+I++NG  + ++ G YT    A    D   ++D  + +          IIG S+S C +SGS+  +      + ++ +KLE+G   +SN+ +  + G    + C++E  VNT +Y+ S      T+V  ++C  +GL +C+R+    QG    ++++SC +N+ YS ++     +  +  +++++    D+QD L+++++  SN+   L    F+L+ Y  +  S   ++      Q   NM   +H   +G  +
Sbjct:  163 KSEIETSTNIFKFRNSLFIKFLEYLDSGVNTETIEDILTQIRKVDCSPKGVVVVDASCKRRYENGVIYVNDLKAGLQISQNGGRLLIKNGDYT----ADAWHDVKLLKDGATLE----------IIGESSSDCCLSGSIKILACPGGKISIRNVKLEIGDSAESNDAMNILGGWVNFDTCVLECFVNTAIYIHSRPDGVLTAVNMKNCFIEGLQSCQRIFSIEQGVNTSLTLNSCYINETYSVLSWFNDKKAENVHVSISNCFINDIQDVLRVVLNEVSNVSVHLEKTSFNLVLYSEEENSTAITLPNQVDLQFSRNMTVLNHTQGVGVCI 479
The following BLAST results are available for this feature:
BLAST of e3 ubiquitin-protein ligase ari7 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000127971.604e-5428.53supercontig:LSalAtl2s:LSalAtl2s972:51702:82543:1 g... [more]
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BLAST of e3 ubiquitin-protein ligase ari7 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of e3 ubiquitin-protein ligase ari7 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325332720|ref|XP_023348213.1|7.383e-2324.47uncharacterized protein LOC111716935 [Eurytemora a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold429_size173697supercontigscaffold429_size173697:54480..59683 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:cytoplasm
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold429_size173697-snap-gene-0.33-mRNA-1maker-scaffold429_size173697-snap-gene-0.33-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold429_size173697:54480..59683-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold429_size173697-snap-gene-0.33 ID=maker-scaffold429_size173697-snap-gene-0.33|Name=e3 ubiquitin-protein ligase ari7|organism=Tigriopus kingsejongensis|type=gene|length=5204bp|location=Sequence derived from alignment at scaffold429_size173697:54480..59683- (Tigriopus kingsejongensis)
ATCCTCTTTGGAATCTGTTCCACTGGGTGCCTTCGGTGATTTCGGAGGGT
GGAAAGTTCCCATCTGGCCGGTGTGGAACGGGTCTGGTCGCAGAAAGCCA
TCCTTTTCTTCGGCGATTTCTTCTCTCTGGCTCACTCAAGAAGAAAAAGA
AAGAAAGAATTGCTGCTTTCTTAAGGCGGCTAAAGAACAAGAAGGGAGAC
CCATGGGTGGAACAGTTCCATCCTGGGTGTTCCTCTTTTCGCCTTTCTGC
TCAGCCACACGCACACACTAGGGCACGGTGGAAGAAGCCCAAGCGTCAAG
TTCTCTTCGCCCACACCAATTGTGTCCAAAATTGAATTGTGGACAAATTC
TATTTGTGGCCATTTGCCACCAGCTTCTTCATCATCTGAGGCCACTTCTG
AGGCTGAGGATTTTACCGTCAACTGGGAGGAAGTCGAGAGGAGGATGCGA
GACATGGAGATCGCCAGGCAGGAACACGCACACCAGGATGAGTCTGTCAC
GGGGGACCATAACAGTCAGTCTGGTTTAGCAGGTACGGAATGAGGGCTCA
AACTTGATTAACCATCCTTTCTATCTTTCTTCCTTCGGTCACTCTTTGAG
CCAACTGGCAGAGGTCAATTTGGGCGCCGTCTCATGCCAATAAATTGACC
TTGGTCAAACTCGCCCTGCCCATACAGCCCTTGACTCAGTCAGACTCAGG
CAGGCTGGCTGGTCAGCCGCTCACCAATGACCACTCTGGACAGCCCAAAA
GGCCTTGCAAATTATCCGGTTTGACCCAGATCTTGGCCGAGACAACGTTT
GAAACTACTACTTGGTACTAATCGACTCTCGGAAACAAAAACGTGATTCT
GAATCACGATCTTAGGATTTTTCACTCACTTGTAGAGAGCATATCCAGTC
CAGAGAACACCTGATTAGCCATGGGTCCTGAAAGCTTCGTTTTTTTATTT
GATGTTTTTAGGAGGATTTTTGACATGCCAAAAATGACCATAAATGGAGT
TGTTTTTCCATGAATTCTGAACAGTTCAATTGGAGGCTTGTGAAGTTGCA
ATCCTACAGCGTTCAAGCCAATAATGTAGTATCGGGCAAAATGTGAAACG
AAATAATTACATGATGGTTATTTTACAGAATGGGTGCACACCCTGATTGG
ATTGAAGGAGCTTAGCCATGAGGAGGAAGCCGATTTATTGCATAGGTTCC
CTCATGGTCTGGATACGCCTTTCATGATCCCCTTGGATGTCCAAGATTTG
ACGGAAGCCATATCCAAGCTAATGAACGACGATGGTGTCATTCAGGACAT
CCAACACGAGTTGGGACGGTCCTCTGAGACTGAGATCATCCAATTCTTTG
ATCACCTCCTGGAGTCGGTGGAGCGAATACCCTTGGCCGGAGAGACGATC
GAGGAATTTGAGTATCGCCGCCGAGAAATTTCCCTGGAGCACAAGCTCTC
CTTCCAAAAGTTCTCCAAGAAGGGGTTCACTGTCCAAGAGAAGTTCCAGG
AGGGCGACATGTTCTATAGGCAAAAGAAGTTCAAACAGGCATACGTCAGC
TTCTGCGATGCCATCTTTGCATGTGAAGCCCGTCCATTGGCCGAGATGGC
CGATCATTATGCCGAAGAGTATCAAGGGACACAAGTGCCCTACAACTTGG
TGTTCTTGAATCTGCGAATTAAGCAGATTGAGAGCTTACTTTTGGCCAAG
GATTACCACCGTGCTTCGGTGTACGCCCACGCTCTTCTCAATTGGATGAC
AGTGCACAAGGCTCGCAATGTGGTGGGCTATTACGCCTCCTACCACAGTG
ATAGCTACTCCCTCCTTCAGATTCTCATGGGAGAGGCTGAAATCGCTCTG
GGGGATATCCACCGAGCCATTGACAAGTGCTCAGTGGCCATTCGAAACTT
CTGCAAGCTCAAATCCACGGTGGCTCTGGAGCGCTCCATCTACAGCATCC
GTCAGAACTTTTACGAGAAGCTCATCGAGGTGTATGAGAAGGGGGGCAAT
CTCAAGGATGTCCCGGCGAACAGGACCAAGGCCAACATCATCGTTGATCC
GTCCCAAAAGAAAGGCTTCATCGATGGGCAGTTCATCCTCAACGACCTCG
TGAGTGCGCTCAGGATCGCCAAAAATGGCGACACCATCTTCTTAGAAGAG
GGCACCTACACCACAGCTAACGTCGCCGGAGGAGGACAGGATTCCACCAT
GGAGGATCACCAGAGCAAGAAGGTCCCTTTTGAGATCCGGAAGGCTGTGT
GCATCATTGGTTGCTCGGCCAGCAAGTGCATCATTTCCGGCTCCTTGGTC
AAATGGGGATCCACCGCCGTGCTGCTGAAGAGGCTCAAGCTGGAGGTGGG
ACTGGACATTGACTCCAATGAAGATATCTACTTCATGGACGGCATCACGT
GTCTCGAGGATTGCATCATCGAGAGCCCCGTGAACACGTGCATGTATGTC
ATTAGTCCCAATTTTGCCACCGAAACATCCGTCCGCTTCCGCCATTGCAT
CTTCGATGGACTTGGCAACTGCAAGAGGATGATCTGTTTTCAGGTGAGTT
TGCCGAGTTGAATTCAGATGAAATCCACCTCCAGCTGGCGGGGGAAAGCG
GAATTGTATCCGCATATTTCCTATATTCGGATTGATACCCCGAAGTCAAA
TCGAGTACTATCCCTCTTTGTTTTGAATTAACTCTACTTATTATCAAAAA
AAAATCGTTAAGTATATCGGTATTATCCCAGGCTGTCTTGCTTGAAGAGT
TATTACTTGATAGCGCTCCCTTGAAACATTTTTCTCAAACAGTTCACGGC
ACTTTTGAACAAATATCCTCCACCTTCAAGGACATAAATCCGTTGACAAA
ACTGTCATCATTCTTGGATTCAGATTGCCTTTATCCCTAACGATATATTG
ACTAAGAAATCCATTGAAAATGACCAGGGACAAGAAGACTCTTTTGATAA
TATTTGCTTCGAGTGAATAACTGAGTTTTCATATGAAGTCGAATAATTTT
TGAACATTTAATGTACCCGAATCATATTTGGCTGCTTTTCAAAGTTCGCT
TGTGCCATTGAGGCAAACCAACTCGGAGTAGACTTGTATGACAGTTAGGA
TATCTGAAGGACGCTACATTATGGAGAACAATTTCATTTTCCAGGGTCCC
AGACCTCAGATTTCCATCGACTCGTGTTGCGTCAACGACATGTACAGCTT
CGTGACTGTGATCTATCCGGATGAGAGGACTTCTGCCATCCTCACCGTGA
CAGACTCTGTCTTCTACGACCTTCAGGATGGTCTCAAGATCATTGTGCAT
CATGAGAGCAACCTGGTGGCCTCACTCATCGGATGTCAGTTTGACCTCAT
CAAGTACGATTCGGACTGTCCCTCGCATGGATTTTCCATGACTGGAGGCA
CTGCGCAGGTAATTTGAACTCAAAATGCTCAGGAATCAGCTTTCATGGCT
CTTTTGGAGCCAGGAATATCTTGGCTCAGGTTAGTCATAACTGGTTTGAT
CAAGCAGCGCCCATTCAAGTCAAACCGGGATATCCTCCATACATGTACCA
ATCGTGACAGATTATTCGGCAAAAGTTTCAGGCACGCTCGCAAATTTTCA
AGCCTTTGAGGTCGCAAGGATGTGAACGACGCGGGTTGATGTCCTGCTAT
GGAGTGGTCTTGAAGGGGGTGCCCAGCGACCTCTGACCAGGCATTTGGAC
GGGCAATGAGCCTTTCCAGCAGTTCTCCTGAGGGGTTTAGAGTTTGTCCA
GAACCCAACCTGTAAAAGATGCATCGTTCTCCATGGAGTGCAAGAATCAC
CTGGAGGTCGCTCAAAACAAAAAATGTGTCCAAAGGTTCAGGAAGCTCGA
AAGCCGTTAATGTAATCAATTGACGGACTTGAGGTACGCATGACATTTCT
ACCAGTTCTGTAGGGTTTAAGAGTCCATTAACTACTCATTCTGAAACCCT
ACGTAACTTCGTGAAATGTCCCCGCAACTCCCGCCTGTGAATTGATTGCA
TTAATGGCTTTCAAGCTTCCTGAATCTTTGGACACATTTTTTTCGTTCTG
TGCGACCTCCAGGGGAATCTAATACTCTATGCTTTATCCAATTGACAGGA
TGTACTGAAAAGCCATGCATCCAGAATCGAAAGAGGGCTATTTTAAGATT
TTCCTTGCCTTCTGGGACACTGAGTGGGTTGGAAAAACTGTCCATTAACC
GGCAATCCAACGGCAATTGAAGGTTGATTGACACTCACGACCATGGTTAA
GTTACCTACATATCAGCACATAACTCGTTGGCATCCTGGCGATCTTGGTC
CAGTGTGACCATTGTTCTTCTTTAGGGGTGGGAGTTTGCCCGATTAGTAC
ACCTACAGTACATCTCGGCTTGTGTTTCAGATCCAAGGCAATATGATCTA
TTGCTCTCATTTGGACTCGATCGGATTCTCCCTCCACTCGCTTCGCCGAC
TCGATATCGACATGAATCTCATCGAGACGGGGCAAGAGCACCCCAGAGCC
TTGAGCACAGGTCAAGGAGTGGTGCTGTCCGACAATCTCAATGTGAATCT
GGCGTCCACGGAGGTGATTGGCCTTCGAATTGGCTTCCAAATGTCCAACC
AATTCGACGAGATGAACAACATCATCCTCCGGGATTGTAGTGCCAAGCAG
TGCTCATTGGGAGTGTTTGTGAAAAATGCTCATCCGGACAAGAAAGGCAA
CTCTCACCATCCCGTAAATCAGGAGATCACCTTGTACCAATGTCACTTCG
ATGCCTGCTACTACGCTTTCATGTGCGATGACCACCAGTCCAAGATCGAC
GTGATCAATTGCTCATTCTACGACATTCCCAAGCCGATTCTGTCGGTCAA
GGCCAGCCTTTTCAACCTGAATCTGAGGGGCAACGAGTACAAATTGAGCC
GAGACTTCCACATCGACGGCTTTGTCCGGAACGACGATGAGCACGAGATC
GAGGTCTCTAGTGACGAGTGCGAAAAACTTCGCCAGCAAATGTATCTCTA
CTTCGCCGCCAAGGAGAACTTGCCTCATCGGATGGCCATCGACATGAAAT
ACTTCCAACTGATCGGATCCTCAGGAGACGAAACGCAAGTCATGGAAAAG
TTCAATCTCTTTCGAGAAAGCACGCTCATTGAGTGATGAGCACACCCACA
AACCAAGACAGTGCAGGGCATTATGAAACCATCGAAGGGCATTATGAAAC
CATC
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Synonyms
The feature 'e3 ubiquitin-protein ligase ari7' has the following synonyms
Synonym
Tk09730
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