loc733259 protein, maker-scaffold430_size173499-snap-gene-0.33 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of loc733259 protein vs. L. salmonis genes
Match: EMLSAG00000008270 (supercontig:LSalAtl2s:LSalAtl2s4:1304083:1353771:-1 gene:EMLSAG00000008270 transcript:EMLSAT00000008270 description:"maker-LSalAtl2s4-augustus-gene-13.10") HSP 1 Score: 173.711 bits (439), Expect = 5.553e-52 Identity = 79/175 (45.14%), Postives = 113/175 (64.57%), Query Frame = 0 Query: 62 LLSLNVREAIRVLRQKEHKARVSALVQRNADFYRRQRCCECVTMMSLLSVFTSFSLYVIFAYGFHVGQRLPFTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVHYDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFSR 236 ++S +R+ +R LR+ EHK V L ++ A +Y RQR CEC+TM S + FT FS Y++ +YGF+ G PF L + N +++I + EN CQTD WE+CRW H++ FCDFE TS + ++ +CDFP K G+Y + +CG+++H D DRGLW CE+EK Y GFSR Sbjct: 59 IMSATLRKTLRNLRRNEHKTLVKRLKKKKALYYSRQRFCECITMTSFIISFTIFSFYMVLSYGFYFGIPRPFELTE-NLTTRIVVNKNENVNFKCQTDHPWEYCRWTHHNSFCDFERTSKTK-IDQRSCDFPQNKASFWGNYSNNECGLQLHQADISDRGLWXCEMEKXYLGFSR 231
BLAST of loc733259 protein vs. L. salmonis genes
Match: EMLSAG00000006322 (supercontig:LSalAtl2s:LSalAtl2s345:140275:141660:-1 gene:EMLSAG00000006322 transcript:EMLSAT00000006322 description:"maker-LSalAtl2s345-augustus-gene-1.9") HSP 1 Score: 67.0106 bits (162), Expect = 2.285e-13 Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 111 VFTSFSLYVIFAYGFHVGQRLPFTLVQANHSSKIHQME-GENGELWCQTDQYWEWCRWVHYDQ--FCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKY 230 +F S +Y + F V + SS+I + GE L C+ +QYWE+C W H + C+FEW + V C + + GDY+ ++C ++I L+ KD G W C VE Y Sbjct: 3 LFISRLIYTLLFISFPVXGAIKI----VKDSSQIAKGNVGEAVVLKCRVNQYWEYCTWKHVSRGNSCNFEWKYSTGKVVRQQCPSLWSRAKFGGDYDKYECNLKIDVLEEKDFGQWTCIVEDY 121
BLAST of loc733259 protein vs. nr
Match: gi|1325310328|ref|XP_023336768.1| (uncharacterized protein LOC111707838 isoform X1 [Eurytemora affinis]) HSP 1 Score: 105.916 bits (263), Expect = 3.014e-23 Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 0 Query: 121 FAYGFHVGQRLPFTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVHYDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFSR 236 A+GF FT+V + EG +L CQTD WEWCRW+H D++C++EW S S GV+ T C+ V+LIG+Y QCG+R+ +D + G WLCE+EKY+ GFSR Sbjct: 1 MAHGFEYFHTANFTMVY--QTPYTWSKEGVQVDLMCQTDMPWEWCRWIHMDEYCEWEWISESEGVKLTGCNMV--DVDLIGEYNLHQCGVRVM-VDAEHEGEWLCEIEKYHPGFSR 111
BLAST of loc733259 protein vs. nr
Match: gi|1325310330|ref|XP_023336770.1| (uncharacterized protein LOC111707838 isoform X2 [Eurytemora affinis]) HSP 1 Score: 103.219 bits (256), Expect = 2.343e-22 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 0 Query: 148 EGENGELWCQTDQYWEWCRWVHYDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFSR 236 EG +L CQTD WEWCRW+H D++C++EW S S GV+ T C+ V+LIG+Y QCG+R+ +D + G WLCE+EKY+ GFSR Sbjct: 12 EGVQVDLMCQTDMPWEWCRWIHMDEYCEWEWISESEGVKLTGCNMV--DVDLIGEYNLHQCGVRVM-VDAEHEGEWLCEIEKYHPGFSR 97
BLAST of loc733259 protein vs. nr
Match: gi|1325326871|ref|XP_023345287.1| (uncharacterized protein LOC111714416 [Eurytemora affinis]) HSP 1 Score: 77.0258 bits (188), Expect = 7.531e-13 Identity = 39/132 (29.55%), Postives = 61/132 (46.21%), Query Frame = 0 Query: 105 MMSLLSVFTSFSLYVIFAYGFHVGQRLPFTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVHYDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFSR 236 M+ LL F F L L T+ + + + I +GE L C D ++EWC + H D+ CD+EW + + CD + G Y+ ++CG+ I N +D G W C++E+Y G R Sbjct: 1 MIRLLIFFKIFGL------------SLALTVTKHSPADVITVKQGETFTLLCTVDTFYEWCTFRHEDKICDYEWKRAAWNLTVADCDAYADRASYQGRYDYYECGVEIRNAGPEDTGEWSCDLEEYIRGGER 120
BLAST of loc733259 protein vs. nr
Match: gi|1325280005|ref|XP_023324663.1| (uncharacterized protein LOC111698541 [Eurytemora affinis]) HSP 1 Score: 75.485 bits (184), Expect = 2.401e-12 Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = 0 Query: 132 PFTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVHYD-----QFCDFEWTSHSAGVETTTCDFPTG-KVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKY 230 F +V ++S + ++EGE E+ C+++ +WE+C W H + CDFEW + V+ C +V + GDYE +CG++I N+ +D G W CE+E+Y Sbjct: 18 KFQIVDHKYNSGV-RIEGETLEMRCRSNNHWEYCTWRHITGSGGVKQCDFEWKRMTGKVQVMDCHSEVSHRVSVSGDYEKHECGLKIENITMEDSGTWECEMEEY 121
BLAST of loc733259 protein vs. nr
Match: gi|1325269327|ref|XP_023349657.1| (uncharacterized protein LOC111718328 [Eurytemora affinis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.396e-11 Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 115 FSLYVIFAYGFHVGQRLP-FTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVHYDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFSR 236 ++ ++ GF + + P +LV+ N S + L C+ + Y+EWC + H C+FEW V TT C ++ GDY F+C I+I +D G W C +EKY G SR Sbjct: 14 LTIQLLHISGFELQESGPTLSLVRVNSSFR----------LSCRANSYYEWCTFYHTVSKCEFEWKRKPWNVTTTDCKDFGDRISFQGDYNKFECAIKIETSVPEDTGEWSCVLEKYVRGKSR 126
BLAST of loc733259 protein vs. nr
Match: gi|1325311990|ref|XP_023337625.1| (uncharacterized protein LOC111708473 isoform X1 [Eurytemora affinis]) HSP 1 Score: 67.3958 bits (163), Expect = 1.698e-9 Identity = 32/120 (26.67%), Postives = 57/120 (47.50%), Query Frame = 0 Query: 117 LYVIFAYGFHVGQRLPFTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVH-YDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKYYSGFS 235 L + YG + ++ V+ + + G + C++ ++E+C +++ + CDFEW + C KV+ IG Y F+CGI I + D G+W C++E+Y G S Sbjct: 3 LIIFIFYGGAMFSKVNGFQVEGVGEALVQGALGAAVNMTCRSSSFYEYCTFINPIGETCDFEWRRKQWNITMRKCSTLNQKVKFIGSYTEFECGIEISEISRADLGIWKCQMEQYVFGGS 122
BLAST of loc733259 protein vs. nr
Match: gi|1325280738|ref|XP_023325033.1| (cell wall integrity and stress response component 1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 62.003 bits (149), Expect = 1.126e-7 Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 0 Query: 133 FTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVH-YDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKY 230 FT+++ + + Q GE L C TD +WE+C++ CDFEW GV C +VE G Y +CGI I + +D G+W C +E+Y Sbjct: 21 FTMLKIDPGMVVAQ-PGERISLLCGTDGHWEYCKFYSPQGTDCDFEWKRAFNGVLKQECGL-GDRVEFYGRYNDKECGITIKDPKPEDTGVWTCHMEEY 117
BLAST of loc733259 protein vs. nr
Match: gi|1325280740|ref|XP_023325034.1| (cell wall integrity and stress response component 1-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 62.003 bits (149), Expect = 1.154e-7 Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 0 Query: 133 FTLVQANHSSKIHQMEGENGELWCQTDQYWEWCRWVH-YDQFCDFEWTSHSAGVETTTCDFPTGKVELIGDYESFQCGIRIHNLDTKDRGLWLCEVEKY 230 FT+++ + + Q GE L C TD +WE+C++ CDFEW GV C +VE G Y +CGI I + +D G+W C +E+Y Sbjct: 21 FTMLKIDPGMVVAQ-PGERISLLCGTDGHWEYCKFYSPQGTDCDFEWKRAFNGVLKQECGL-GDRVEFYGRYNDKECGITIKDPKPEDTGVWTCHMEEY 117 The following BLAST results are available for this feature:
BLAST of loc733259 protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of loc733259 protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of loc733259 protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 8
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold430_size173499:32434..33334+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold430_size173499-snap-gene-0.33 ID=maker-scaffold430_size173499-snap-gene-0.33|Name=loc733259 protein|organism=Tigriopus kingsejongensis|type=gene|length=901bp|location=Sequence derived from alignment at scaffold430_size173499:32434..33334+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'loc733259 protein' has the following synonyms
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