tetraspanin-1 isoform x2, maker-scaffold442_size170051-snap-gene-0.32 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000007389 (supercontig:LSalAtl2s:LSalAtl2s41:849318:887607:1 gene:EMLSAG00000007389 transcript:EMLSAT00000007389 description:"maker-LSalAtl2s41-snap-gene-8.5") HSP 1 Score: 302.753 bits (774), Expect = 1.135e-103 Identity = 159/285 (55.79%), Postives = 201/285 (70.53%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVE----------ELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNERDY 275 MVADCGAT AKY+LCLFNFIFF+ G+AV+ +G WL +DK SFI LT+FS LN + E ELTEPTVIEQGAYILIAAGAFIFI+SFLG CGAIKES+VLLTAYG+FIIII LLQI IVL +YK+ AE HT+ FFKHTI+KYY TDF+ A +F++ N G Q++PE+CCKLD N ++ FKP D +C + P+ NSYM +GC+ + D++ S+L +VIGV++G++ +Q++GIIFAFCLCKAVG+ DY Sbjct: 1 MVADCGATFAKYLLCLFNFIFFIVGSAVICIGVWLXIDKTSFIXLTKFSQLNNEFETQEEVRGIIRELTEPTVIEQGAYILIAAGAFIFIISFLGXCGAIKESKVLLTAYGIFIIIITLLQIXAIVLVVLYKNHAEDHTKKFFKHTIQKYY----------------------------TDFRSAVKFMQMVNANGNKQVIPESCCKLDPNVDVAFFKPADDQCTLDPTPLNSYMKQGCFNVINDWISSNLRIVIGVAIGILGVQLIGIIFAFCLCKAVGHFADY 257
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000012176 (supercontig:LSalAtl2s:LSalAtl2s87:2579:10248:1 gene:EMLSAG00000012176 transcript:EMLSAT00000012176 description:"maker-LSalAtl2s87-snap-gene-0.24") HSP 1 Score: 122.094 bits (305), Expect = 1.188e-33 Identity = 62/192 (32.29%), Postives = 108/192 (56.25%), Query Frame = 0 Query: 55 VEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDR-KDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVI 245 + E+ + + Q I +G + + + LGY GA KESRVLL YG +I++ ++ II + A Y E + F ++T+ +YT +R DA+T+ ++++MAE+ CCG+++ TDF+ A F K ++ Q++P ACC ++ F P D C+ P++ NSY +GC+ ++ + LN +I Sbjct: 12 IHEVNQSKSLNQFGQFFILSGGSLLLFTSLGYFGAAKESRVLLICYGFLMIVLMSFEVVIISVYAGYTKEFVDVIKQFLRYTLTNFYTGAERSSDAITMGFNYIMAEMKCCGIDNYTDFKKARIFQK--KKEHYYQVLPSACCIINPERYPPYFVPEDLNCLAAPTSYNSYFLKGCWDRFTHWINNALNPLI 201
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000009268 (supercontig:LSalAtl2s:LSalAtl2s58:698204:699085:1 gene:EMLSAG00000009268 transcript:EMLSAT00000009268 description:"augustus_masked-LSalAtl2s58-processed-gene-7.0") HSP 1 Score: 94.3597 bits (233), Expect = 9.028e-23 Identity = 71/263 (27.00%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 7 ATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAE-LHCCGVEDSTDFQMATEFIKYTNQQGQGQL--VPEACCKLDSNYEMGVFKPV----DSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFA 262 + C KY++ FN IF++ G +L +G W +K +F +L+ + + D A+I I AGA F++ F G GA++E+ LL Y +F+ ++ L ++ +L V+K + F+ I Y D+++ + D++ + L CCG+E D+ F + G + VP +CCK + V K V D I S +GC ++L ++ +V G +V + ++ILGI FA Sbjct: 37 SCCLKYLIFGFNVIFWLLGLCILAIGIWAWTEKDTFNNLSVLTNIALD------------PAFIFIWAGALTFVIGFTGCVGALRENTSLLAXYAIFLALLLLXEMTAGILGFVFKDWIKEQASSGFQTVIVHYRDDPDQQNLI----DWIQDDWLQCCGIEGPHDWDKNIYFNCSSASVGSREACGVPFSCCKPKVDE---VIKNVQCGYDVRKIDYSDPSGIINQKGCLHAAEEWLZQNILLVAGSAVSIAFLEILGICFA 280
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000008247 (supercontig:LSalAtl2s:LSalAtl2s498:206287:219492:1 gene:EMLSAG00000008247 transcript:EMLSAT00000008247 description:"maker-LSalAtl2s498-augustus-gene-2.18") HSP 1 Score: 96.6709 bits (239), Expect = 1.421e-22 Identity = 76/263 (28.90%), Postives = 121/263 (46.01%), Query Frame = 0 Query: 5 CGATCAKYILCLFNFIFFVAGTAVLGVGTW-LAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTR-GFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCL 265 C C ++ LFNF+ F+ G A+ GVG W + V S + LT + + AY LI G F+ ++S +G CG K S L+ Y + + I+ L + AI LA Y+ + R F R+Y +D++T + D + + CCGV+ D++ TE+ T+ + Q LVP++CC S + C ++ SN GC + H+ ++ VS+GV IQI G+ + CL Sbjct: 594 CSQDCLRFSTHLFNFLLFLTGIALSGVGLWTIIVKDPSLVLLTS--------------GLYDVIAYALIIMGLFVLVLSIMGCCGISKRSPRLMLIYSICLXIMXLAEXAIGALAYCYRDYINSELRVNLFDKYQREYGN----EDSITKAIDQLQVGMKCCGVDSFEDWK-KTEWWNQTDIR-QKNLVPDSCCLTPSAF-----------CGVRDHPSNIRYT-GCIDRIGKIASDHMIIIGAVSLGVCIIQIFGVCLS-CL 823
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000000992 (supercontig:LSalAtl2s:LSalAtl2s116:1968610:1969491:-1 gene:EMLSAG00000000992 transcript:EMLSAT00000000992 description:"augustus_masked-LSalAtl2s116-processed-gene-19.10") HSP 1 Score: 87.0409 bits (214), Expect = 3.907e-20 Identity = 76/261 (29.12%), Postives = 125/261 (47.89%), Query Frame = 0 Query: 9 CAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAE-LHCCGVEDSTDFQMATEFIKYTNQQGQGQL--VPEACCKLDSNYEMGVFKPV----DSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFA 262 C KY++ FN IF++ G +L +G W +K +F +L+ + + D A+I I AGA F++ F G GA++E+ LL AY +F+ ++ LL++ +L V+K + F+ I Y D+++ + D++ + L CCG+E D+ F + G + VP +CCK + N V K V D I S +GC ++L +L VV G +V + ++ILGI FA Sbjct: 39 CLKYLIFGFNVIFWLLGLCILAIGIWAWTEKDTFNNLSVLTNIALDP------------AFIFIWAGALTFVIGFTGCVGALRENTNLLAAYAIFLALLLLLEMTAGILGFVFKDWIKEQASSGFQTVIVHYRDDPDQQNLI----DWIQDDWLQCCGIEGPHDWXKNVYFNCSSASVGSREACGVPFSCCKPNVNE---VIKNVQCGYDVRKIDYTDPSGIINQKGCLHAAEEWLZHNLXVVSGSAVXIAFLEILGICFA 280
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003506 (supercontig:LSalAtl2s:LSalAtl2s191:170365:186205:-1 gene:EMLSAG00000003506 transcript:EMLSAT00000003506 description:"maker-LSalAtl2s191-snap-gene-2.7") HSP 1 Score: 79.337 bits (194), Expect = 1.185e-17 Identity = 66/272 (24.26%), Postives = 121/272 (44.49%), Query Frame = 0 Query: 9 CAKYILCLFNFIFFVAGTAVL---GVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRK--DAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLD-SNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNERD 274 C KY+L FN +F ++G ++ GV + + F+ F+T +LI G F V+F G CGAIKE+ + + + + +I ++++ + A + K E R + + K T + + + VT +W+ + EL CCG ++ D+ T +K + VP++CC D G+ + I + S GC + + S++ V+ G+ + + +Q +G+IFA CL K + E + Sbjct: 7 CVKYLLFTFNLLFALSGLILIIAGGVIQGIYAEYLDFLGDQFFNT-----------------PILLIVVGCITFCVTFFGCCGAIKENHCMTLTFSVLLAVIFVIELGAGIAAYLLKSEV----RQIIEVNMEKGLTNYESRGHEGVTKTWNIVQHELECCGAQEYKDWINTTFSVKTYS-------VPDSCCFSDVQGCGEGILR------ISEDQASKIIHVNGCLDKLEHLISSNVEVIGGIGIAIAFLQFIGLIFACCLAKNLKKEYE 244
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000007344 (supercontig:LSalAtl2s:LSalAtl2s415:301718:345428:1 gene:EMLSAG00000007344 transcript:EMLSAT00000007344 description:"maker-LSalAtl2s415-augustus-gene-2.17") HSP 1 Score: 65.0846 bits (157), Expect = 5.447e-13 Identity = 48/168 (28.57%), Postives = 79/168 (47.02%), Query Frame = 0 Query: 9 CAKYI---LCLFNFIFFVAGTAVLGVGTWLAVDK-------RSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGV 166 C +++ L + NF+ G +VLG+G W +DK R+ HL FST YI + G I VS LG GA K+++ +L Y + I ++++ I VL+ V++ + + + + HTI Y +D + +T +WD L CCG+ Sbjct: 11 CGRFVKLSLIVVNFLTLFGGLSVLGIGLWTLIDKFYIEILLRN--HLYMFST------------------YITMIVGVVIIFVSILGCYGAQKDTKYILLTYFITIFFLSVVLIIGGVLSYVFRDQVKHNLKPEMLHTI-NIYRPKDTRSDITEAWDATQRNLKCCGL 157
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011144 (supercontig:LSalAtl2s:LSalAtl2s757:42372:43082:-1 gene:EMLSAG00000011144 transcript:EMLSAT00000011144 description:"augustus_masked-LSalAtl2s757-processed-gene-0.3") HSP 1 Score: 62.003 bits (149), Expect = 1.681e-11 Identity = 65/260 (25.00%), Postives = 115/260 (44.23%), Query Frame = 0 Query: 5 CGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFC 264 CG+ KY++ L +F+FF G A++ +G +L S+ E G++++I G I I+SF G CG E+ L+ G + ++ L +I ++V YK + + KY + + VT W+ + + CCG D ++ ++ +P++CCK S+ + +DS+ PS N+ GC + + + + VIGV VG++ ++LGII A C Sbjct: 3 CGSV-FKYVVFLAHFVFFCLGIALISIGAYLGNRMESYFDF--------------EGNSYFAGSFVIIGIGIVILIISFFGCCGMCMENACLMRTLGFLLFLLILTEIGVVVSYLFYKDTFQDVIVENMIGDMDKY--NKPDFEQVTKEWNHLQIDFACCGTNDYKEWFNSSY-----------ARIPDSCCKTVSD-QCAKDITIDSD----PSAINT---EGCIKEXNRIISDNQSSVIGVGVGLLLFELLGIIIACC 226
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000005170 (supercontig:LSalAtl2s:LSalAtl2s273:20378:24248:-1 gene:EMLSAG00000005170 transcript:EMLSAT00000005170 description:"maker-LSalAtl2s273-augustus-gene-0.6") HSP 1 Score: 50.447 bits (119), Expect = 2.380e-7 Identity = 47/223 (21.08%), Postives = 89/223 (39.91%), Query Frame = 0 Query: 77 FIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKY--TNQQGQGQLVPEACC-KLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLN---VVIGVSVGVIA-IQILGIIFAFCLCKAVGNERDYFLRKAKAKTKAKPSAHP 292 F + S G+ A+K LL Y +F+ I ++ I IV + + + G + + + V WD + +E CCG ++ ++ + T+ + VP++CC + VF D +I GC ++ L +H+ +V V G++A I++LGI+ + C+ + +R ++ PS P Sbjct: 124 FTLLTSNFGFYVAVKGDPCLLITYSVFLSIQFVILIMGIVSSVRLLFDIQA---GLYNIDVIADLRHYETDSWVRYKWDTLQSEYSCCG-----GYRWGHGYMDWKGTDMGARKNSVPDSCCLNISPQCGANVFDITDPRKVI-----GKIHIHGCLTIMFTRLETHVQLILIVFAVVGGILAIIELLGIVMSCCMASSAAEQRSHWEGSTNNDFHDLPSTRP 333
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|81904726|sp|Q9D1D1.1|TSN11_MOUSE (RecName: Full=Tetraspanin-11; Short=Tspan-11) HSP 1 Score: 117.087 bits (292), Expect = 4.645e-30 Identity = 75/256 (29.30%), Postives = 122/256 (47.66%), Query Frame = 0 Query: 11 KYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSY-MNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCL 265 KY+L +FNF F+V G AV+ VG W V+K ++ + ST A AYILI G + FLG+ I+E + L+ Y +++I L+++ VLA VY + T+ ++Y + R +T S D + + CCG S D+Q + + +Q+ G+ VP++CC K V + C + SN Y + GC + ++ HL ++ V +GV +QI G++ CL Sbjct: 17 KYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAAS-------------AYILIFVGGLVMTTGFLGFGAIIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNSTLTEHY-GQPRAAEITASVDRLQQDFKCCGSNSSADWQHSAYIL---SQEALGRQVPDSCC-----------KTVVARCGQRAHPSNIYKVEGGCMAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCL 244
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|122142388|sp|Q0VC33.1|TSN11_BOVIN (RecName: Full=Tetraspanin-11; Short=Tspan-11) HSP 1 Score: 114.775 bits (286), Expect = 3.330e-29 Identity = 76/252 (30.16%), Postives = 121/252 (48.02%), Query Frame = 0 Query: 11 KYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSY-MNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIF 261 KY+L +FNF F+V G AV+ VG W V+K ++ + ST A AYILI AGA + + FLG+ I+E R L+AY ++ I L+++ VLA VY + T+ + Y + +T S D + + CCG S D+ ++ + + + +G+ VP++CC K V + C + SN Y + GC + +L HL ++ V +GV +QI G+I Sbjct: 17 KYLLFIFNFFFWVGGAAVMAVGVWTLVEKSGYLGVLASSTFAAS-------------AYILIFAGALVMVTGFLGFGAVIREDRGCLSAYFCLLLAIFLVELVAGVLAHVYYQRLSDELKQHLTRTLAENYRQPGAAE-ITASVDRLQQDFKCCGSNSSADWLQSSYIL---SPEAEGRRVPDSCC-----------KTVVARCGQRAHPSNIYKVEGGCISKLEQFLADHLLLMGAVGIGVACLQICGMIL 240
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|85687560|sp|P48509.3|CD151_HUMAN (RecName: Full=CD151 antigen; AltName: Full=GP27; AltName: Full=Membrane glycoprotein SFA-1; AltName: Full=Platelet-endothelial tetraspan antigen 3; Short=PETA-3; AltName: Full=Tetraspanin-24; Short=Tspan-24; AltName: CD_antigen=CD151) HSP 1 Score: 114.005 bits (284), Expect = 7.852e-29 Identity = 87/269 (32.34%), Postives = 135/269 (50.19%), Query Frame = 0 Query: 5 CGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSY-MNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNE 272 CG C KY+L +N F++AG AV+ VG W K +I L T A AYIL+ AG + + LG C KE R LL Y + ++II LL+I +LA Y + T + K T+ K Y + +AVT + D + E HCCG +S D++ +E+I+ +Q+ G++VP++CC K V + C + SN Y + GC + ++ HL V+ V +G+ +Q+ G+IF CL +++ E Sbjct: 11 CGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT-------------AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMTKRY-HQPGHEAVTSAVDQLQQEFHCCGSNNSQDWR-DSEWIR--SQEAGGRVVPDSCC-----------KTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLKLE 251
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|110816449|sp|Q32KU6.1|TSN6_BOVIN (RecName: Full=Tetraspanin-6; Short=Tspan-6) HSP 1 Score: 113.235 bits (282), Expect = 9.435e-29 Identity = 75/268 (27.99%), Postives = 130/268 (48.51%), Query Frame = 0 Query: 8 TCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRD-RKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPS-TSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNER 273 TC K +L ++ FIF++ G +L VG W V ++ FS LN + ++LI G I ++ G + S +L Y +F+ +I L+++ ++ V++HE + + ++ +++Y T D R DAV D + + LHCCGV + D++ Y +++G PE+CCKL+ +C P ++ N GC+ V + S + VV G+S GV Q++GI A+CL +A+ N + Sbjct: 15 TCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENY-----FSLLNEKATNV---------PFVLIGTGTVIILLGTFGCFATCRASAWMLKLYAMFLTLIFLVELVAAIIGFVFRHEIKNSLKNNYEKALKQYNATGDYRSDAV----DKIQSMLHCCGVTNYRDWKDT----NYYSEKG----FPESCCKLE-------------DC--SPQRDADKVNNEGCFIMVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQ 241
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|162416205|sp|A1L157.2|TSN11_HUMAN (RecName: Full=Tetraspanin-11; Short=Tspan-11) HSP 1 Score: 112.849 bits (281), Expect = 1.950e-28 Identity = 76/256 (29.69%), Postives = 121/256 (47.27%), Query Frame = 0 Query: 11 KYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSY-MNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCL 265 KY+L +FNF F+V G AVL VG W V+K ++ + ST A AYILI AG + + FLG+ + E + L+ Y +++I L+++ VLA VY + T+ + Y + +T S D + + CCG S D+Q +T + ++ +G+ VP++CC K V C + SN Y + GC + +L HL ++ V +GV +QI G++ CL Sbjct: 17 KYLLFVFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAAS-------------AYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKQHLNRTLAENY-GQPGATQITASVDRLQQDFKCCGSNSSADWQHSTYILL---REAEGRQVPDSCC-----------KTVVVRCGQRAHPSNIYKVEGGCLTKLEQFLADHLLLMGAVGIGVACLQICGMVLTCCL 244
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|11135138|sp|O70401.1|TSN6_MOUSE (RecName: Full=Tetraspanin-6; Short=Tspan-6; AltName: Full=Transmembrane 4 superfamily member 6) HSP 1 Score: 112.079 bits (279), Expect = 2.951e-28 Identity = 73/267 (27.34%), Postives = 129/267 (48.31%), Query Frame = 0 Query: 8 TCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRD-RKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNER 273 TC K +L ++ FIF++ G +L VG W V ++ FS LN + ++LI G I ++ G + S +L Y +F+ +I L+++ ++ V++HE + + +++ +++Y +T D R +AV D + + LHCCGV + D++ Y ++ G P++CCKL+ Y V+ E GC+ V + S + VV G+S GV Q++GI A+CL +A+ N + Sbjct: 15 TCLKSVLLIYTFIFWITGVILLAVGIWGKVSLENY-----FSLLNEKATNV---------PFVLIGTGTVIILLGTFGCFATCRTSAWMLKLYAMFLTLIFLVELVAAIVGFVFRHEIKNSFKSNYENALKEYNSTGDYRSEAV----DKIQSTLHCCGVTNYGDWKGT----NYYSETG----FPKSCCKLEGCYPQRDADKVNEE--------------GCFIKVMTTIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQ 241
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|81888058|sp|Q568Y5.1|TSN11_RAT (RecName: Full=Tetraspanin-11; Short=Tspan-11) HSP 1 Score: 112.079 bits (279), Expect = 3.648e-28 Identity = 74/256 (28.91%), Postives = 120/256 (46.88%), Query Frame = 0 Query: 11 KYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSY-MNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCL 265 KY+L +FNF F+V G AV+ VG W V+K ++ + ST A AY+LI G + FLG+ I+E + L+ Y ++ I L+++ VLA VY + T+ ++Y + +T S D + + CCG S D+Q + + +Q+ G+ VP++CC K V + C + SN Y + GC + +L HL ++ V +GV +QI G++ CL Sbjct: 17 KYLLFIFNFFFWVGGAAVMAVGIWTLVEKSVYLSILASSTFAAS-------------AYVLIFVGGLVMTTGFLGFGAIIREQKSCLSTYFCLLLAIFLVELVAGVLAHVYYQRLSDELKRHLHSTLTEHYGQPGAAE-ITASVDRLQQDFKCCGSNSSADWQHSVYIL---SQEAIGRQVPDSCC-----------KTVVARCGQRAHPSNIYKVEGGCMAKLEQFLADHLLLMGAVGIGVACLQICGMVLTCCL 244
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|75055033|sp|Q5RAS5.1|TSN6_PONAB (RecName: Full=Tetraspanin-6; Short=Tspan-6) HSP 1 Score: 110.923 bits (276), Expect = 8.134e-28 Identity = 74/267 (27.72%), Postives = 129/267 (48.31%), Query Frame = 0 Query: 8 TCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRD-RKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNER 273 TC K +L ++ FIF++ G +L VG W V ++ FS LN + ++LIA G I ++ G + S +L Y +F+ +I L+++ ++ V++HE + + ++ +++Y +T D R AV D + LHCCGV D D+ Y +++G P++CCKL+ +C + ++ N GC+ V + S + VV G+S GV Q++GI A+CL +A+ N + Sbjct: 15 TCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENY-----FSLLNEKATNV---------PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLIFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAV----DKIQNTLHCCGVTDYRDWTDT----NYYSEKG----FPKSCCKLE-------------DCTPQRD-ADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQ 241
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|68053316|sp|Q96SJ8.1|TSN18_HUMAN (RecName: Full=Tetraspanin-18; Short=Tspan-18) HSP 1 Score: 110.923 bits (276), Expect = 9.266e-28 Identity = 86/270 (31.85%), Postives = 147/270 (54.44%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNR-GCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAV 269 M DC +C KY++ +FNF F+ G +L +G W+ VD F + + L + GAYIL+A G +F++ FLG CGA++E++ LL + LFI+II L +++ +LA +++ E TR FF + K+Y + D + +W+ +M CCGV DF+ A+ F T + VPEACC+ + GV + EC++ S ++N+ GCY + + +++ + +++GV+AI++ +IFA CL + + Sbjct: 1 MEGDC-LSCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPL------------LLTGAYILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFR---ENLTREFFTKELTKHYQGNNDTDVFSATWNSVMITFGCCGVNGPEDFKFASVFRLLTLDSEE---VPEACCRREPQSRDGVLLSRE-ECLLGRSL---FLNKQGCYTVILNTFETYVYLAGALAIGVLAIELFAMIFAMCLFRGI 247
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Match: gi|11135101|sp|O43657.1|TSN6_HUMAN (RecName: Full=Tetraspanin-6; Short=Tspan-6; AltName: Full=A15 homolog; AltName: Full=Putative NF-kappa-B-activating protein 321; AltName: Full=T245 protein; AltName: Full=Tetraspanin TM4-D; AltName: Full=Transmembrane 4 superfamily member 6) HSP 1 Score: 110.538 bits (275), Expect = 1.222e-27 Identity = 73/267 (27.34%), Postives = 129/267 (48.31%), Query Frame = 0 Query: 8 TCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRD-RKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNER 273 TC K +L ++ FIF++ G +L VG W V ++ FS LN + ++LIA G I ++ G + S +L Y +F+ ++ L+++ ++ V++HE + + ++ +++Y +T D R AV D + LHCCGV D D+ Y +++G P++CCKL+ +C + ++ N GC+ V + S + VV G+S GV Q++GI A+CL +A+ N + Sbjct: 15 TCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENY-----FSLLNEKATNV---------PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAV----DKIQNTLHCCGVTDYRDWTDT----NYYSEKG----FPKSCCKLE-------------DCTPQRD-ADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQ 241
BLAST of tetraspanin-1 isoform x2 vs. nr
Match: gi|907744862|ref|XP_013117104.1| (PREDICTED: tetraspanin-18 [Stomoxys calcitrans]) HSP 1 Score: 243.817 bits (621), Expect = 1.439e-76 Identity = 119/268 (44.40%), Postives = 169/268 (63.06%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKA 268 M +DCG KY+LC+FNF+FF+ GT VLG G WLAVDK S I L + + +++ T+P VIEQ AY+LIA G +F++SFLGYCGAI+ESR +L+ YG+F+I++ + +I LAA YK A ++ F + TI K+Y T + DAVTL W+ MM CCGV D DF+ + ++ + +PEACC+L ++ P D C+ PS +NS+ +GCY+ +++I H ++IGV GV I IL I AFCLCK+ Sbjct: 1 MGSDCGVWFGKYVLCIFNFLFFILGTIVLGTGIWLAVDKASLIALLKMVE-SEHIDQFTQPQVIEQMAYVLIAIGGIMFLMSFLGYCGAIRESRCMLSTYGVFMILLLVAEIVAGGLAAFYKETARNESKSFLQSTITKFYNTAEHTDAVTLMWNQMMTTFGCCGVVDYRDFEASPSWMASKGN----RTIPEACCRLK---DIKNLIPEDDFCVTNPSEANSFFKKGCYEAFTEWIILHREIIIGVLAGVGLIHILAIFLAFCLCKS 260
BLAST of tetraspanin-1 isoform x2 vs. nr
Match: gi|755893828|ref|XP_005190281.2| (PREDICTED: tetraspanin-18 [Musca domestica]) HSP 1 Score: 239.965 bits (611), Expect = 4.664e-75 Identity = 125/268 (46.64%), Postives = 172/268 (64.18%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKA 268 M +DCG KY+LC+FNF+FF+ GT VLG G WLAVDK S I L + + + E T+P VIEQ AY+LIA G F+F++SFLGYCGAI+ESR LLT YG+F+I++ + +I LAA YK A ++GF + TI KYYT+ + DAVTL W+ MM CCGV D DF+ + ++ +G + +PEACC+L ++ P D C+ PS +NS+ +GCY+T D++I H ++IGV G I +L I AFCL K+ Sbjct: 1 MGSDCGVWFGKYVLCIFNFVFFILGTIVLGTGIWLAVDKSSLIALFKMVE-SEHINEFTQPQVIEQMAYVLIAIGGFMFLMSFLGYCGAIRESRCLLTTYGVFMILLLIAEIVAGGLAAFYKETARNESKGFLQSTITKYYTSSEHTDAVTLMWNQMMTTFGCCGVVDYRDFEQSPSWL---TSKGN-RTIPEACCRLK---DIKNLIPEDEFCVTNPSEANSFYMKGCYETFTDWIIIHREIIIGVLAGAGIIHLLVIFLAFCLSKS 260
BLAST of tetraspanin-1 isoform x2 vs. nr
Match: gi|751452467|ref|XP_011180604.1| (PREDICTED: CD82 antigen [Zeugodacus cucurbitae]) HSP 1 Score: 239.195 bits (609), Expect = 1.101e-74 Identity = 131/268 (48.88%), Postives = 176/268 (65.67%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKA 268 M +DCG AKY+LCLFNF+FFV GT VLG G WLAVDK S I L + + + + T+P VIEQ AY+LIA GA +F +SFLGYCGAI+ESR LLT YG+F+I++ + +I LAA YK +A T+ F + TI YY+T + DAVTL W+ +M+++ CCGV D DF + + + + +G L PEACC L +M P D +C+I PS SNSY +GCY+ D++ISH ++IGV +GV + + I AFCLCKA Sbjct: 1 MGSDCGVWLAKYLLCLFNFLFFVVGTIVLGTGIWLAVDKASLIALLKMVE-SDQITQFTQPRVIEQMAYVLIAIGAVMFFMSFLGYCGAIRESRCLLTTYGVFMILLLIAEIVAGGLAAFYKEKARAETKTFLQSTISDYYSTHENMDAVTLMWNQLMSQMSCCGVNDYRDFDAS---LAWVSNKGNRTL-PEACCVLKDVSQM---LPRDDDCVINPSESNSYYKKGCYEVFTDWIISHREIIIGVLLGVGIVHLFAIFLAFCLCKA 260
BLAST of tetraspanin-1 isoform x2 vs. nr
Match: gi|751798132|ref|XP_011208966.1| (PREDICTED: CD82 antigen [Bactrocera dorsalis] >gi|1098643863|ref|XP_018787892.1| PREDICTED: CD82 antigen [Bactrocera latifrons]) HSP 1 Score: 237.654 bits (605), Expect = 4.669e-74 Identity = 131/268 (48.88%), Postives = 176/268 (65.67%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKA 268 M +DCG AKY+LCLFNF+FFV GT VLG G WLAVDK S I L + + + + T+P VIEQ AY+LIA GA +F +SFLGYCGAI+ESR LLT YG+F+I++ + +I LAA YK +A T+ F + TI YY+T + DAVTL W+ +M+++ CCGV D DF + +I + +G L PEACC L +M P D +C+I PS SNS+ +GCY+ D++ISH ++IGV +GV + + I AFCLCKA Sbjct: 1 MGSDCGVWLAKYLLCLFNFLFFVVGTIVLGTGIWLAVDKASLIALLKMVE-SDQITQFTQPRVIEQMAYVLIAIGAVMFFMSFLGYCGAIRESRCLLTTYGVFMILLLIAEIVAGGLAAFYKEKARAETKTFLQSTITDYYSTHENMDAVTLMWNQLMSQMSCCGVNDYRDFDASLAWI---SNKGNRTL-PEACCVLKDVSQM---LPRDDDCVINPSESNSFYKKGCYEVFTDWIISHREIIIGVLLGVGIVHLFAIFLAFCLCKA 260
BLAST of tetraspanin-1 isoform x2 vs. nr
Match: gi|1080036176|ref|XP_018576478.1| (tetraspanin-1 [Anoplophora glabripennis]) HSP 1 Score: 229.95 bits (585), Expect = 3.739e-71 Identity = 120/273 (43.96%), Postives = 182/273 (66.67%), Query Frame = 0 Query: 1 MVADCGATCAKYILCLFNFIFFVAGTAVLGVGTWLAVDKRSFIHLTRFSTLNADVEELTEPTVIEQGAYILIAAGAFIFIVSFLGYCGAIKESRVLLTAYGLFIIIIALLQIAIIVLAAVYKHEAETHTRGFFKHTIRKYYTTRDRKDAVTLSWDFMMAELHCCGVEDSTDFQMATEFIKYTNQQGQGQLVPEACCKLDSNYEMGVFKPVDSECIIKPSTSNSYMNRGCYQTVYDYLISHLNVVIGVSVGVIAIQILGIIFAFCLCKAVGNER 273 MV DCG+ AKY+LC+FNFI F+AG+ VL +G WLAVDK SFI L++ + ++ T+P VIEQ +YILIA GA +F+VSFLGYCGA++ES+ +LT YG+ ++II +L+I + LA +YK +AE T+ K T+ KY + + DA+T++WD + LHCCGV++ TD+Q + + ++VPE+CC LD P+ C P+ NSY +GCY+ V D+++++LN++IG+++G ++ILGI +FCL K++ R Sbjct: 1 MVYDCGSFMAKYVLCIFNFIIFLAGSTVLAIGIWLAVDKNSFIGLSKIVP-SDQLQNFTKPGVIEQVSYILIAIGALMFLVSFLGYCGALRESQCMLTTYGILLLIILILEITVGCLALIYKAKAEEETKNILKSTLVKYNQSAENGDAITVAWDSLQVSLHCCGVDNYTDYQKNDAWAR------GNKIVPESCCVLDDVTS----APLAPTCTTAPNDVNSYYMKGCYKAVIDWIMTNLNIIIGIAIGFGVVEILGIFLSFCLAKSINGFR 262 The following BLAST results are available for this feature:
BLAST of tetraspanin-1 isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of tetraspanin-1 isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of tetraspanin-1 isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold442_size170051:135434..139872- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold442_size170051-snap-gene-0.32 ID=maker-scaffold442_size170051-snap-gene-0.32|Name=tetraspanin-1 isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=4439bp|location=Sequence derived from alignment at scaffold442_size170051:135434..139872- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'tetraspanin-1 isoform x2' has the following synonyms
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