homeobox protein abdominal-, maker-scaffold446_size168061-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000003864 (supercontig:LSalAtl2s:LSalAtl2s209:662907:667166:1 gene:EMLSAG00000003864 transcript:EMLSAT00000003864 description:"maker-LSalAtl2s209-snap-gene-5.14") HSP 1 Score: 146.747 bits (369), Expect = 5.030e-42 Identity = 76/111 (68.47%), Postives = 80/111 (72.07%), Query Frame = 0 Query: 43 LHQHFMVITAACNTHLIQRESTHIHMGSFFHPQGLVDLLT--IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 151 LH + +T L TH G FF P G+ L G VRKKRKPYSK+QTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ Sbjct: 176 LHADYSRFNYPPDTGLY----THPPTGFFFPPAGIGTPLEHWTGHVSVRKKRKPYSKYQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 282
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000004485 (supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 gene:EMLSAG00000004485 transcript:EMLSAT00000004485 description:"augustus_masked-LSalAtl2s233-processed-gene-1.0") HSP 1 Score: 83.1889 bits (204), Expect = 9.269e-19 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 76 GLVDLLTIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148 G L T + R+ R+ Y+++QTLELEKEF N Y+++++R E+A L LTERQIKIWFQNRRMK KK Q Sbjct: 213 GGTHLFTGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKKEIQ 285
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000000557 (supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-1 gene:EMLSAG00000000557 transcript:EMLSAT00000000557 description:"snap_masked-LSalAtl2s108-processed-gene-6.6") HSP 1 Score: 77.411 bits (189), Expect = 4.227e-18 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148 +++R Y+++QTLELEKEF FN Y+++++R E+A L LTERQIKIWFQ RRMK KK ++ Sbjct: 10 TKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQXRRMKWKKEHK 70
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000010453 (supercontig:LSalAtl2s:LSalAtl2s692:190336:216029:1 gene:EMLSAG00000010453 transcript:EMLSAT00000010453 description:"maker-LSalAtl2s692-snap-gene-1.4") HSP 1 Score: 71.633 bits (174), Expect = 6.619e-16 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKS-----KKNN 147 R+ R+ Y++FQTLELEKEF FN Y+++++R E+A L LTERQIKIWFQN +K KKNN Sbjct: 40 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNHTIKDLFSKLKKNN 103
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000001337 (supercontig:LSalAtl2s:LSalAtl2s1223:315656:316658:1 gene:EMLSAG00000001337 transcript:EMLSAT00000001337 description:"maker-LSalAtl2s1223-augustus-gene-2.71") HSP 1 Score: 73.1738 bits (178), Expect = 2.259e-15 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 74 PQGLVDLLTIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 P+G + L ++ R +S Q +ELEKEF FN Y+ +R E+A+NL +TERQIKIWFQNRRMK KK Sbjct: 183 PEG--NNLKESSTSNKRPRATFSSSQIVELEKEFHFNRYLCGPRRKEMAKNLCMTERQIKIWFQNRRMKQKK 252
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000001102 (supercontig:LSalAtl2s:LSalAtl2s1183:46311:63939:1 gene:EMLSAG00000001102 transcript:EMLSAT00000001102 description:"maker-LSalAtl2s1183-snap-gene-0.3") HSP 1 Score: 70.0922 bits (170), Expect = 4.742e-15 Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRM 141 +++R Y++ Q LELEKEF FN Y+++++R E+A L L+ERQIKIWFQNRRM Sbjct: 114 KRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRM 166
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000007689 (supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-1 gene:EMLSAG00000007689 transcript:EMLSAT00000007689 description:"maker-LSalAtl2s447-snap-gene-4.59") HSP 1 Score: 65.855 bits (159), Expect = 9.455e-14 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0 Query: 95 YSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 ++ QTL LE E+ N Y+S+ +R+ELA NL+LTE QIKIWFQNRR K K+ Sbjct: 19 FTSDQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKR 69
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000003917 (supercontig:LSalAtl2s:LSalAtl2s211:1120659:1122189:-1 gene:EMLSAG00000003917 transcript:EMLSAT00000003917 description:"maker-LSalAtl2s211-augustus-gene-11.12") HSP 1 Score: 68.5514 bits (166), Expect = 2.297e-13 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0 Query: 90 KKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 K R YS Q LELEKEF + Y++ +++ ELA L LTERQ+KIWFQNRR K +K Sbjct: 281 KYRVVYSDHQRLELEKEFHXSRYITIRRKAELATGLGLTERQVKIWFQNRRAKERK 336
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000006502 (supercontig:LSalAtl2s:LSalAtl2s356:525701:540805:1 gene:EMLSAG00000006502 transcript:EMLSAT00000006502 description:"snap_masked-LSalAtl2s356-processed-gene-5.5") HSP 1 Score: 67.3958 bits (163), Expect = 4.520e-13 Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0 Query: 101 LELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQP 157 LELEKEF FN Y+ + +R E+A +L+L+ERQ+K+WFQNRRMK K RQ + N P Sbjct: 73 LELEKEFHFNKYLCRPRRIEIAASLDLSERQVKVWFQNRRMKHK----RQSSSSNTP 125
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000004821 (supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-1 gene:EMLSAG00000004821 transcript:EMLSAT00000004821 description:"maker-LSalAtl2s254-augustus-gene-3.28") HSP 1 Score: 65.855 bits (159), Expect = 1.245e-12 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 +R+ R +++ Q LEKEFL Y+S+ KR ELA LNL E IK+WFQNRRMK K+ Sbjct: 133 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 190
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|1708231|sp|P09087.3|ABDB_DROME (RecName: Full=Homeobox protein abdominal-B; AltName: Full=Infraabdominal 7; Short=IAB-7; AltName: Full=P3; AltName: Full=PH189) HSP 1 Score: 124.405 bits (311), Expect = 2.970e-31 Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0 Query: 83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 GQ VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNL LTERQ+KIWFQNRRMK+KK Sbjct: 382 TGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|172045557|sp|Q9YGT5.3|HXA9B_DANRE (RecName: Full=Homeobox protein Hox-A9b) HSP 1 Score: 98.2117 bits (243), Expect = 3.655e-23 Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148 RKKR PY+K QTLELEKEFLFN Y+S+ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ Sbjct: 187 TRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRMKMKKCNK 247
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|115502399|sp|Q9PWM6.2|HXD9A_DANRE (RecName: Full=Homeobox protein Hox-D9a; Short=Hox-D9) HSP 1 Score: 98.5969 bits (244), Expect = 3.929e-23 Identity = 43/66 (65.15%), Postives = 57/66 (86.36%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153 RKKR PY+K+QTLELEKEFL+N Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ + ++ Sbjct: 195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRERSSK 260
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|123321|sp|P10179.1|HMB4_TRIGR (RecName: Full=Homeobox protein HB4) HSP 1 Score: 93.5893 bits (231), Expect = 7.511e-23 Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150 RKKR PY+KFQTLELEKEFLFN Y+++ +R E+AR L+LTERQ+KIWFQNRRMK KK N+ Q Sbjct: 43 RKKRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWFQNRRMKMKKQNRAQ 104
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|119370790|sp|Q1KKY2.1|HXB9A_TAKRU (RecName: Full=Homeobox protein Hox-B9a) HSP 1 Score: 97.4413 bits (241), Expect = 7.989e-23 Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150 RKKR PY+K+QTLELEKEFLFN Y+++ +R E+AR LNLTERQ+KIWFQNRRMK KK ++ Q Sbjct: 191 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRRMKMKKQSKDQ 252
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|1708346|sp|P50209.1|HXA9_AMBME (RecName: Full=Homeobox protein Hox-A9) HSP 1 Score: 94.3597 bits (233), Expect = 9.245e-23 Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148 RKKR PY+K QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ Sbjct: 78 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINK 138
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|110825727|sp|Q9PWM2.2|HXB9A_DANRE (RecName: Full=Homeobox protein Hox-B9a; Short=Hox-B9) HSP 1 Score: 97.0561 bits (240), Expect = 1.153e-22 Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153 RKKR PY+K+QTLELEKEFLFN Y+++ +R E+AR LNLTERQ+KIWFQNRRMK KK N+ Q + Sbjct: 185 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKDQPKE 249
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|14916598|sp|Q9IA26.1|HXA9_HETFR (RecName: Full=Homeobox protein Hox-A9) HSP 1 Score: 97.0561 bits (240), Expect = 1.412e-22 Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150 RKKR PY+K QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ + Sbjct: 193 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKINKER 255
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|119370801|sp|Q1KKS9.1|HXD9A_TAKRU (RecName: Full=Homeobox protein Hox-D9a) HSP 1 Score: 97.0561 bits (240), Expect = 1.654e-22 Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 0 Query: 88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK-NNQRQQTQH 154 RKKR PY+K+QTLELEKEFL+N Y+++ +R+E+AR L+LTERQ+KIWFQNRRMK KK N +R +H Sbjct: 205 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILSLTERQVKIWFQNRRMKMKKQNRERSGKEH 272
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|123285|sp|P24340.1|HXD9_CHICK (RecName: Full=Homeobox protein Hox-D9; AltName: Full=Homeobox protein Hox-4.4; Short=Chox-4.4) HSP 1 Score: 90.8929 bits (224), Expect = 1.656e-22 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = 0 Query: 89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145 RKKR PY+K+QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK Sbjct: 2 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 58
BLAST of homeobox protein abdominal- vs. nr
Match: gi|1325333743|ref|XP_023348712.1| (homeobox protein Hox-B9a-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 139.428 bits (350), Expect = 9.653e-36 Identity = 77/114 (67.54%), Postives = 82/114 (71.93%), Query Frame = 0 Query: 64 THIHMGSFFHPQGLVDLLT--IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQN-RRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHN 174 TH G FF P GL L G VRKKRKPYSKFQ ELEKE+LFNAYVSKQKRWELARNLNLTERQIKIWFQN RRMKSKKN+QRQ NQP S +S S ++HN Sbjct: 185 THPPHGFFFPPGGLGSPLNHWTGYVSVRKKRKPYSKFQLAELEKEYLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRRMKSKKNSQRQS---NQPSSGDGSSHSQQANQAHN 295
BLAST of homeobox protein abdominal- vs. nr
Match: gi|1253777095|ref|XP_022670603.1| (homeobox protein Hox-B4-like [Varroa destructor] >gi|1268033336|ref|XP_022689818.1| homeobox protein Hox-B4-like [Varroa jacobsoni]) HSP 1 Score: 141.739 bits (356), Expect = 1.142e-35 Identity = 72/107 (67.29%), Postives = 78/107 (72.90%), Query Frame = 0 Query: 82 TIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHNNPKGLWGLANALLG 188 T G VRKKRKPYSK QTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMKSK+N+QRQQTQ+ + S P GL GL +L G Sbjct: 231 TQGTVHVRKKRKPYSKLQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKSKRNSQRQQTQNRSSQIALANSPLGAHTPGPPGPHGLSGLPPSLPG 337
BLAST of homeobox protein abdominal- vs. nr
Match: gi|1067095973|ref|XP_018009927.1| (PREDICTED: homeobox protein abdominal-B-like [Hyalella azteca]) HSP 1 Score: 139.428 bits (350), Expect = 1.954e-35 Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHN 174 G VRKKRKPYSKFQTLELEKEFL+NAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ Q ++ + SS G +H Sbjct: 223 TGNVTVRKKRKPYSKFQTLELEKEFLYNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQAAQEAAGNNGATTPSSGGGTPAHG 314
BLAST of homeobox protein abdominal- vs. nr
Match: gi|1173890818|gb|OQR69497.1| (homeobox protein Hox-D10a-like [Tropilaelaps mercedesae]) HSP 1 Score: 140.198 bits (352), Expect = 3.290e-35 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0 Query: 82 TIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQH 154 T G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMKSK+N+QRQQTQ+ Sbjct: 226 TQGTVHVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKSKRNSQRQQTQN 298
BLAST of homeobox protein abdominal- vs. nr
Match: gi|87042411|gb|ABD16214.1| (abdominal-B [Strigamia maritima]) HSP 1 Score: 137.117 bits (344), Expect = 7.011e-35 Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 0 Query: 63 STHIHMGSFFHPQGLVDLLT-IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153 +T + + + P+ L + L G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QR QT Sbjct: 198 ATEPVVSTPYAPESLTNPLEWTGNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRNQTD 289
BLAST of homeobox protein abdominal- vs. nr
Match: gi|391333933|ref|XP_003741364.1| (PREDICTED: homeobox protein abdominal-B [Galendromus occidentalis]) HSP 1 Score: 137.502 bits (345), Expect = 7.020e-35 Identity = 75/116 (64.66%), Postives = 82/116 (70.69%), Query Frame = 0 Query: 84 GQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHNNPKGLWGLANALLGTPLNALLPTSL 199 G VRKKRKPYSKFQTLELEKEFL+NAYVSKQKRWELARNLNLTERQ+KIWFQNRRMKSK+N+QRQQTQ+ S Q N P G A++L TP L P L Sbjct: 182 GTVHVRKKRKPYSKFQTLELEKEFLYNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKSKRNSQRQQTQNR-----------SSQIALANTPISG-GPAHSLGATPPGPLQPMGL 285
BLAST of homeobox protein abdominal- vs. nr
Match: gi|1316167020|ref|XP_023228868.1| (homeobox protein abdominal-B-like [Centruroides sculpturatus]) HSP 1 Score: 137.117 bits (344), Expect = 9.095e-35 Identity = 71/103 (68.93%), Postives = 79/103 (76.70%), Query Frame = 0 Query: 76 GLVDLLT------IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKS 172 G VD LT G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMKSKKN+QR N ++Q++ ++GQ S Sbjct: 214 GAVDALTSNPLEWTGNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKSKKNSQR-----NAENNQNANGLANGQTPS 311
BLAST of homeobox protein abdominal- vs. nr
Match: gi|158290044|ref|XP_311628.4| (AGAP004664-PA [Anopheles gambiae str. PEST] >gi|157018342|gb|EAA07262.4| AGAP004664-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 137.887 bits (346), Expect = 1.589e-34 Identity = 71/94 (75.53%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHNNP 176 G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ Q N S +S+S S Q + H+NP Sbjct: 265 TGNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQSAQANSGSSNNSSSHSHSQAQPHHNP 358
BLAST of homeobox protein abdominal- vs. nr
Match: gi|87474981|gb|ABD38144.1| (abdominal-B [Anopheles gambiae]) HSP 1 Score: 137.887 bits (346), Expect = 1.745e-34 Identity = 71/94 (75.53%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQPDSQHSASSSSGQQKSHNNP 176 G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ Q N S +S+S S Q + H+NP Sbjct: 265 TGNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQSAQANSGSSNNSSSHSHSQAQPHHNP 358
BLAST of homeobox protein abdominal- vs. nr
Match: gi|14028791|gb|AAK52499.1|AF361335_1 (abdominal-B, partial [Folsomia candida]) HSP 1 Score: 129.028 bits (323), Expect = 1.842e-34 Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0 Query: 84 GQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 151 G VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQQ Sbjct: 8 GNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQQ 75 The following BLAST results are available for this feature:
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of homeobox protein abdominal- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of homeobox protein abdominal- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold446_size168061:120910..129137+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold446_size168061-snap-gene-0.27 ID=maker-scaffold446_size168061-snap-gene-0.27|Name=homeobox protein abdominal-|organism=Tigriopus kingsejongensis|type=gene|length=8228bp|location=Sequence derived from alignment at scaffold446_size168061:120910..129137+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'homeobox protein abdominal-' has the following synonyms
Add to Basket
|