homeobox protein abdominal-, maker-scaffold446_size168061-snap-gene-0.27 (gene) Tigriopus kingsejongensis

Overview
Namehomeobox protein abdominal-
Unique Namemaker-scaffold446_size168061-snap-gene-0.27
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000003864 (supercontig:LSalAtl2s:LSalAtl2s209:662907:667166:1 gene:EMLSAG00000003864 transcript:EMLSAT00000003864 description:"maker-LSalAtl2s209-snap-gene-5.14")

HSP 1 Score: 146.747 bits (369), Expect = 5.030e-42
Identity = 76/111 (68.47%), Postives = 80/111 (72.07%), Query Frame = 0
Query:   43 LHQHFMVITAACNTHLIQRESTHIHMGSFFHPQGLVDLLT--IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 151
            LH  +       +T L     TH   G FF P G+   L    G   VRKKRKPYSK+QTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ
Sbjct:  176 LHADYSRFNYPPDTGLY----THPPTGFFFPPAGIGTPLEHWTGHVSVRKKRKPYSKYQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 282          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000004485 (supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 gene:EMLSAG00000004485 transcript:EMLSAT00000004485 description:"augustus_masked-LSalAtl2s233-processed-gene-1.0")

HSP 1 Score: 83.1889 bits (204), Expect = 9.269e-19
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
Query:   76 GLVDLLTIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148
            G   L T    + R+ R+ Y+++QTLELEKEF  N Y+++++R E+A  L LTERQIKIWFQNRRMK KK  Q
Sbjct:  213 GGTHLFTGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKKEIQ 285          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000000557 (supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-1 gene:EMLSAG00000000557 transcript:EMLSAT00000000557 description:"snap_masked-LSalAtl2s108-processed-gene-6.6")

HSP 1 Score: 77.411 bits (189), Expect = 4.227e-18
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148
             +++R  Y+++QTLELEKEF FN Y+++++R E+A  L LTERQIKIWFQ RRMK KK ++
Sbjct:   10 TKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQXRRMKWKKEHK 70          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000010453 (supercontig:LSalAtl2s:LSalAtl2s692:190336:216029:1 gene:EMLSAG00000010453 transcript:EMLSAT00000010453 description:"maker-LSalAtl2s692-snap-gene-1.4")

HSP 1 Score: 71.633 bits (174), Expect = 6.619e-16
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKS-----KKNN 147
            R+ R+ Y++FQTLELEKEF FN Y+++++R E+A  L LTERQIKIWFQN  +K      KKNN
Sbjct:   40 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNHTIKDLFSKLKKNN 103          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000001337 (supercontig:LSalAtl2s:LSalAtl2s1223:315656:316658:1 gene:EMLSAG00000001337 transcript:EMLSAT00000001337 description:"maker-LSalAtl2s1223-augustus-gene-2.71")

HSP 1 Score: 73.1738 bits (178), Expect = 2.259e-15
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   74 PQGLVDLLTIGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
            P+G  + L       ++ R  +S  Q +ELEKEF FN Y+   +R E+A+NL +TERQIKIWFQNRRMK KK
Sbjct:  183 PEG--NNLKESSTSNKRPRATFSSSQIVELEKEFHFNRYLCGPRRKEMAKNLCMTERQIKIWFQNRRMKQKK 252          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000001102 (supercontig:LSalAtl2s:LSalAtl2s1183:46311:63939:1 gene:EMLSAG00000001102 transcript:EMLSAT00000001102 description:"maker-LSalAtl2s1183-snap-gene-0.3")

HSP 1 Score: 70.0922 bits (170), Expect = 4.742e-15
Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRM 141
            +++R  Y++ Q LELEKEF FN Y+++++R E+A  L L+ERQIKIWFQNRRM
Sbjct:  114 KRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRM 166          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000007689 (supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-1 gene:EMLSAG00000007689 transcript:EMLSAT00000007689 description:"maker-LSalAtl2s447-snap-gene-4.59")

HSP 1 Score: 65.855 bits (159), Expect = 9.455e-14
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   95 YSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
            ++  QTL LE E+  N Y+S+ +R+ELA NL+LTE QIKIWFQNRR K K+
Sbjct:   19 FTSDQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKR 69          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000003917 (supercontig:LSalAtl2s:LSalAtl2s211:1120659:1122189:-1 gene:EMLSAG00000003917 transcript:EMLSAT00000003917 description:"maker-LSalAtl2s211-augustus-gene-11.12")

HSP 1 Score: 68.5514 bits (166), Expect = 2.297e-13
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   90 KKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
            K R  YS  Q LELEKEF  + Y++ +++ ELA  L LTERQ+KIWFQNRR K +K
Sbjct:  281 KYRVVYSDHQRLELEKEFHXSRYITIRRKAELATGLGLTERQVKIWFQNRRAKERK 336          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000006502 (supercontig:LSalAtl2s:LSalAtl2s356:525701:540805:1 gene:EMLSAG00000006502 transcript:EMLSAT00000006502 description:"snap_masked-LSalAtl2s356-processed-gene-5.5")

HSP 1 Score: 67.3958 bits (163), Expect = 4.520e-13
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  101 LELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQP 157
            LELEKEF FN Y+ + +R E+A +L+L+ERQ+K+WFQNRRMK K    RQ +  N P
Sbjct:   73 LELEKEFHFNKYLCRPRRIEIAASLDLSERQVKVWFQNRRMKHK----RQSSSSNTP 125          
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Match: EMLSAG00000004821 (supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-1 gene:EMLSAG00000004821 transcript:EMLSAT00000004821 description:"maker-LSalAtl2s254-augustus-gene-3.28")

HSP 1 Score: 65.855 bits (159), Expect = 1.245e-12
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
            +R+ R  +++ Q   LEKEFL   Y+S+ KR ELA  LNL E  IK+WFQNRRMK K+
Sbjct:  133 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 190          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|1708231|sp|P09087.3|ABDB_DROME (RecName: Full=Homeobox protein abdominal-B; AltName: Full=Infraabdominal 7; Short=IAB-7; AltName: Full=P3; AltName: Full=PH189)

HSP 1 Score: 124.405 bits (311), Expect = 2.970e-31
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
             GQ  VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNL LTERQ+KIWFQNRRMK+KK
Sbjct:  382 TGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|172045557|sp|Q9YGT5.3|HXA9B_DANRE (RecName: Full=Homeobox protein Hox-A9b)

HSP 1 Score: 98.2117 bits (243), Expect = 3.655e-23
Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148
             RKKR PY+K QTLELEKEFLFN Y+S+ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+
Sbjct:  187 TRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRMKMKKCNK 247          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|115502399|sp|Q9PWM6.2|HXD9A_DANRE (RecName: Full=Homeobox protein Hox-D9a; Short=Hox-D9)

HSP 1 Score: 98.5969 bits (244), Expect = 3.929e-23
Identity = 43/66 (65.15%), Postives = 57/66 (86.36%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153
             RKKR PY+K+QTLELEKEFL+N Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ + ++
Sbjct:  195 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRERSSK 260          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|123321|sp|P10179.1|HMB4_TRIGR (RecName: Full=Homeobox protein HB4)

HSP 1 Score: 93.5893 bits (231), Expect = 7.511e-23
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150
            RKKR PY+KFQTLELEKEFLFN Y+++ +R E+AR L+LTERQ+KIWFQNRRMK KK N+ Q
Sbjct:   43 RKKRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWFQNRRMKMKKQNRAQ 104          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|119370790|sp|Q1KKY2.1|HXB9A_TAKRU (RecName: Full=Homeobox protein Hox-B9a)

HSP 1 Score: 97.4413 bits (241), Expect = 7.989e-23
Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150
            RKKR PY+K+QTLELEKEFLFN Y+++ +R E+AR LNLTERQ+KIWFQNRRMK KK ++ Q
Sbjct:  191 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRRMKMKKQSKDQ 252          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|1708346|sp|P50209.1|HXA9_AMBME (RecName: Full=Homeobox protein Hox-A9)

HSP 1 Score: 94.3597 bits (233), Expect = 9.245e-23
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQ 148
             RKKR PY+K QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+
Sbjct:   78 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINK 138          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|110825727|sp|Q9PWM2.2|HXB9A_DANRE (RecName: Full=Homeobox protein Hox-B9a; Short=Hox-B9)

HSP 1 Score: 97.0561 bits (240), Expect = 1.153e-22
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153
            RKKR PY+K+QTLELEKEFLFN Y+++ +R E+AR LNLTERQ+KIWFQNRRMK KK N+ Q  +
Sbjct:  185 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKDQPKE 249          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|14916598|sp|Q9IA26.1|HXA9_HETFR (RecName: Full=Homeobox protein Hox-A9)

HSP 1 Score: 97.0561 bits (240), Expect = 1.412e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150
             RKKR PY+K QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK N+ +
Sbjct:  193 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKINKER 255          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|119370801|sp|Q1KKS9.1|HXD9A_TAKRU (RecName: Full=Homeobox protein Hox-D9a)

HSP 1 Score: 97.0561 bits (240), Expect = 1.654e-22
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 0
Query:   88 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK-NNQRQQTQH 154
             RKKR PY+K+QTLELEKEFL+N Y+++ +R+E+AR L+LTERQ+KIWFQNRRMK KK N +R   +H
Sbjct:  205 TRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILSLTERQVKIWFQNRRMKMKKQNRERSGKEH 272          
BLAST of homeobox protein abdominal- vs. SwissProt
Match: gi|123285|sp|P24340.1|HXD9_CHICK (RecName: Full=Homeobox protein Hox-D9; AltName: Full=Homeobox protein Hox-4.4; Short=Chox-4.4)

HSP 1 Score: 90.8929 bits (224), Expect = 1.656e-22
Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = 0
Query:   89 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 145
            RKKR PY+K+QTLELEKEFLFN Y+++ +R+E+AR LNLTERQ+KIWFQNRRMK KK
Sbjct:    2 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 58          
BLAST of homeobox protein abdominal- vs. nr
Match: gi|479301|pir||S33375 (homeotic protein Abd-B - desert locust (fragment))

HSP 1 Score: 130.568 bits (327), Expect = 2.448e-34
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQ 150
             GQ  VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ
Sbjct:    8 TGQVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQ 75          
BLAST of homeobox protein abdominal- vs. nr
Match: gi|665797019|ref|XP_008546321.1| (PREDICTED: homeobox protein abdominal-B-like isoform X2 [Microplitis demolitor])

HSP 1 Score: 139.428 bits (350), Expect = 3.243e-34
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153
             GQ  VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ  Q
Sbjct:  371 TGQVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQTQQ 441          
BLAST of homeobox protein abdominal- vs. nr
Match: gi|665797017|ref|XP_008546320.1| (PREDICTED: homeobox protein abdominal-B-like isoform X1 [Microplitis demolitor])

HSP 1 Score: 139.428 bits (350), Expect = 3.732e-34
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQ 153
             GQ  VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQ  Q
Sbjct:  384 TGQVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQTQQ 454          
BLAST of homeobox protein abdominal- vs. nr
Match: gi|321475836|gb|EFX86798.1| (putative homeotic abdominal-B protein [Daphnia pulex])

HSP 1 Score: 139.043 bits (349), Expect = 3.831e-34
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQ 151
             GQ  VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQ+KIWFQNRRMK+KKN+QRQQ
Sbjct:  354 TGQVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQQ 422          
BLAST of homeobox protein abdominal- vs. nr
Match: gi|405109814|emb|CCH51009.1| (abdominal-B, partial [Phalangium opilio])

HSP 1 Score: 130.954 bits (328), Expect = 5.964e-34
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0
Query:   83 IGQAIVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKKNNQRQQTQHNQ 156
             G   VRKKRKPYSKFQTLELEKEFL+NAYVSKQKRWELARNLNLTERQ+KIWFQNRRMKSKKN+QR   ++NQ
Sbjct:  106 TGNVTVRKKRKPYSKFQTLELEKEFLYNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKSKKNSQR-NAENNQ 178          
The following BLAST results are available for this feature:
BLAST of homeobox protein abdominal- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000038645.030e-4268.47supercontig:LSalAtl2s:LSalAtl2s209:662907:667166:1... [more]
EMLSAG000000044859.269e-1954.79supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 ... [more]
EMLSAG000000005574.227e-1857.38supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-... [more]
EMLSAG000000104536.619e-1657.81supercontig:LSalAtl2s:LSalAtl2s692:190336:216029:1... [more]
EMLSAG000000013372.259e-1551.39supercontig:LSalAtl2s:LSalAtl2s1223:315656:316658:... [more]
EMLSAG000000011024.742e-1558.49supercontig:LSalAtl2s:LSalAtl2s1183:46311:63939:1 ... [more]
EMLSAG000000076899.455e-1458.82supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-... [more]
EMLSAG000000039172.297e-1357.14supercontig:LSalAtl2s:LSalAtl2s211:1120659:1122189... [more]
EMLSAG000000065024.520e-1356.14supercontig:LSalAtl2s:LSalAtl2s356:525701:540805:1... [more]
EMLSAG000000048211.245e-1253.45supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-... [more]

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BLAST of homeobox protein abdominal- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1708231|sp|P09087.3|ABDB_DROME2.970e-3190.48RecName: Full=Homeobox protein abdominal-B; AltNam... [more]
gi|172045557|sp|Q9YGT5.3|HXA9B_DANRE3.655e-2373.77RecName: Full=Homeobox protein Hox-A9b[more]
gi|115502399|sp|Q9PWM6.2|HXD9A_DANRE3.929e-2365.15RecName: Full=Homeobox protein Hox-D9a; Short=Hox-... [more]
gi|123321|sp|P10179.1|HMB4_TRIGR7.511e-2372.58RecName: Full=Homeobox protein HB4[more]
gi|119370790|sp|Q1KKY2.1|HXB9A_TAKRU7.989e-2370.97RecName: Full=Homeobox protein Hox-B9a[more]
gi|1708346|sp|P50209.1|HXA9_AMBME9.245e-2372.13RecName: Full=Homeobox protein Hox-A9[more]
gi|110825727|sp|Q9PWM2.2|HXB9A_DANRE1.153e-2269.23RecName: Full=Homeobox protein Hox-B9a; Short=Hox-... [more]
gi|14916598|sp|Q9IA26.1|HXA9_HETFR1.412e-2269.84RecName: Full=Homeobox protein Hox-A9[more]
gi|119370801|sp|Q1KKS9.1|HXD9A_TAKRU1.654e-2264.71RecName: Full=Homeobox protein Hox-D9a[more]
gi|123285|sp|P24340.1|HXD9_CHICK1.656e-2275.44RecName: Full=Homeobox protein Hox-D9; AltName: Fu... [more]

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BLAST of homeobox protein abdominal- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|479301|pir||S333752.448e-3491.18homeotic protein Abd-B - desert locust (fragment)[more]
gi|665797019|ref|XP_008546321.1|3.243e-3488.73PREDICTED: homeobox protein abdominal-B-like isofo... [more]
gi|665797017|ref|XP_008546320.1|3.732e-3488.73PREDICTED: homeobox protein abdominal-B-like isofo... [more]
gi|321475836|gb|EFX86798.1|3.831e-3491.30putative homeotic abdominal-B protein [Daphnia pul... [more]
gi|405109814|emb|CCH51009.1|5.964e-3483.78abdominal-B, partial [Phalangium opilio][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold446_size168061supercontigscaffold446_size168061:120910..129137 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold446_size168061-snap-gene-0.27-mRNA-1maker-scaffold446_size168061-snap-gene-0.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold446_size168061:120910..129137+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold446_size168061-snap-gene-0.27 ID=maker-scaffold446_size168061-snap-gene-0.27|Name=homeobox protein abdominal-|organism=Tigriopus kingsejongensis|type=gene|length=8228bp|location=Sequence derived from alignment at scaffold446_size168061:120910..129137+ (Tigriopus kingsejongensis)
ATGCGGCGGCAGCGGGTTGGAATTATCCTCATCCCTCTCAATATGCAACT TTGGCATCTTCAAGTGCCGATGCAGCTGCAGCTGAAGCTGCTCGAACACG TGCTCATTTATCAGATCCAAATGCATCTGCACCAACATTTCATGGTGATT ACGGCCGCTTGCAATACCCACCTGATCCAACGGGAATCTACACACATCCA CATGGTAAGAGTATTTAAGTCAGGAAGATTTGACAAATTTAAAATATTTT GACAATTAGGTTCCAACATGCATTGTACAAACTGCCAAACTCACCATAAC CCTTTAGAAAATGCCCTTGTTATACACGCCTAACCTTTAATTTTTCTTGT CATTTTTGAAACGCAATTAATTGGTTCCTGCCAGATGAACAATTTGGTGT CTGGCAACGCTCAAGACATTTCACAATATTTACATCGAGTTATGAAGTTC ACATTGAGCTCGTATCATTGGAAAAAAGATATATTTGCAAGATTTGTAAG ATAAAATTGTTTATTCATGTGCATACGGGTTCGGGGTTATCAGAAGGACC CTTCCACAAGCGAATGGCGACAAACATTTCGAATTTGTTTATGTGTTTTT TTTTGCTTTACCTATTGTGGAAAAAGTCAGAGGACGATGACATTCGGTCA GAACATAATCATAATCATTTTTTTTCTTCCAGGGTTCTTTTTTCCACCCA CAGGGCTTGGTGGACCTCTTGACCATTGGACAGGCCATGTCAGTGTCCGA AAGAAAAGGAAACCTTATTCAAAGTTTCAAACCCTAGAATTGGAAAAGGA GTTTCTTTTCAATGCATATGTTTCCAAACAAAAGCGATGGGAGCTGGCAA GAAATCTTAACTTAACCGAGCGTCAAATCAAAATCTGGTTTCAAAACCGT CGCATGAAGAGTAAAAAGAACAACCAAAGACAACAGACTCAACATAATCA ACCTGACTCACAGCATTCTGCATCTTCGTCTTCGGGGCAGCAGGTGATTA GTAATACACAAAGTGGATCCAATGCAAGCAACAACATCCACCCTCATCAC CACCACCATACTGGAGCTTTACTCCAAAACTCTTTACCAAAAGGCCACTG AACACCTTTTCATAGTCCGGAGTGATTTTCCCCAGTCAGTCCTATTCCAT AATTCATATCAGGATATCTCAATGATTCGGAAATTTTACTTCAAGTTTTG TGGAGATAAGAGACTCCTGTTTTGGTGGTTGAGACATTTGCATGATTCTG GTTGTTTCATTGTCACTTCATATGCCTGTAGTATCAATATAAGTGCATTG TTCGAGTATTATTTTTGTTGGAAGTTGTGGATCCGGAATTTTTTAGATCT GGTAATTGACAAGCGCATTCATTCTGTCGGACGGACACAATTTGGGCGTT GACGATTTTTATACAAATTTGTTTTTATTCAGGCAGGTTCGTCTTAGTGT AATAAAGCTCAAGCAATTTAATTTTGCACAAGAAAATTGACATTTTGAGG CCTCTTTGAAGCTGATCCTGGCTCAATTGGGGCTCCTTCTGATTGTGTAC ATATATTATGTTTTTAAAATGAAATGTAGCTATGGTGAGATAATTGCACC CATGGAAATCCAAGGCAAAACATGGACCAATTTCATGCAATACCAGAGAA ATGGCAAAACATCAACAACGAATTGCCGTATACCCGGGCGAGGGAAAGCG GGGAAAACTACGACCTTGCTCCAAGGCCATTTTATCATTGATGATATTAC ATTTTAGTGTTATTATTCCCAATTTTATTTAGATTTCGACTGTTACGAAA CCTGTTCATTCAATACTAAACAGTAATGACTAAACATCAATAACGAATTG CCGTATATTTTCTGGGGCCAAATTTGCTAGACATTCGGAATTCGTCGAAG TGAGAATTGTTAACAAACGGGCAGTAAAGAATTAAGTATTGCCCACCAGC TTCTAGGGGTATTTTTTACAACTGATTACAATTCTAGTAATCATAGTACA GAATTGCAGTAAATAACAAATAAGAAAGATGTTGGCCAGTTTGGTAAAGC ATTTTTTAAGTGTGCCGAAGCGACAAGCGAAAGCTTGATAAAACCTAAAA TACTGAGTGTTTAGCGAGGAAAACGTAAACAGCAAAAAATGAGTTCGAAA TTATGCTAAAATAATCCTAAAGATGCAAAAAAATCTGCAAAAAGCATTGG CCAGGTAAATACGCACAAACCCCCAAAATCACCGTTGGCAACCCTGGTCG TATGGGAGGGTAGCGAGGCCTTTTAGTTGCTTAGTTTTTGAAAATAGCAT CATCCTCGTTTTGGCAAAGTTTTGCAAAACCCTTGGCTAGCATTGCCCAG TCAGTGTTGCCAGATGATTTTGGTCAAATATCCCAACAAAATGAGCAAAT TTCCCCAGAATTATCCCTAGAAATTTTGCTTGTGCCAATTTCACCCCCCA AAATTGCAAAATTTCCCAAAACATTGATTTGGAATGTTAACATGGTTTTA GTAGATGTCTACATTGTATTTCAAGATCTCTTTGGGTGGAACAAATTCAC TGAGGGGCACATTGAATTTCCTCAGCCCAAAAAACTTTAGCTCTCTTGGT TCCTTGATTCCAGTCACAAATGCACATTTGTTTCCTTAAACAGTCTTACT ATCTTGATGCAAGCTAAGCTCCGGAATATTTTAATATCATTGCTCAAATA AGATAGTAACATAATTTAAGGTCCAAGGTCATTTTGTCAAGCAGTACTTC TTTTTAATTTTGAAAGGGCAGCTGAATAACTCATTTTTGTGCTAGCCATA ACTTCTTGAAAGGTTTAGGAGACCTGTGATCCATTCATGATTGTTCTGCT GTAGATTCAAGTCTCGCACTTTTTTCACAAGTCAAGTCAAGGCAGTTCCT TTTGTTGAGGTTTACCCATTGAGGTAACACGCAGTAAGTCCTTGGGTATA CCGACTTAGCTTGAATCACTAAGATAGGAGACTAGACAGTCTTTGATCAC GGCTCACCATGGGCAGAATACTGGCAGTTCAAGAAGTGGAGTAGCCAGGG CTTTGTTTGTCTCATTCTTTTTTAAAGTTCTTATTCTTTATTTTCTTTGA CATTGCACGATTTGTTTGTAATGGGATGTTGTGAGGGAGTTTAGCTTTTG GTCTTTTAGTGAGTAGGTAGGTAAAATGGTTTGAGACCAAACAGTACTCA GTGTTTGCCACCACCTTGTATGTTTAGTTTGCGCCACAAGGTATTTTTTC TCTTACTGACTTTTACATAATGTCTAATAAGGCCGGTGTGTCATGGACCG ACCTCGCAAGCTATTGAGATAACAGGATATTCACCATGGCTTCATGGGCA CTCACCAATGAGGGGACTCACAACCTATTCTCTGTGTCTGATTTTTGGGG GTGAATTCCAGGGTAGGCAGATGAGATGTTCACAATAGCAGTTCCAAGTC TGACCTGTCATATGGAAGAGGCTTGTCTAGTCTGGACTCTCCTCATGAAC AATAGGCTGTTGCACTTCACTGTCACCGGGCTGTGGCCATCAACAACCAC AGTGAGCGGCCCATTGCCAACCTTGGGCCCAGGGCTCCCTTGTCAGGATT GGCCATGTCACTGGATGTCATTGAGTAAACTGACAGTTGGATTCCCAGGT CGTGGATTGATCTCACAATCAGAGCTTTCAAGGCCTGAACTTGGAGCCAG CCGACCTGGGGACCCTGGGATGACCCAATACCTCATTAGGTAGGCCGGGA ACACAACACAAGTTCGGGGTTTGACCCGCACTGGGATTAAACACCGCTCA AATTCGAAATTTGATTTGAATTCTCCGCTGCTTAGTAGTGGCTCAGGCCG CTGGCCTGGCCCTAAGTCTGGCAGAAAACAGGAAAAATGCAGGGTGGCAC TGCTTCCCGATAAATTTAGTATTCCAAGACAGAGTCGAGCTGTTGTAGAA GGATCAACTTAAGATTCAACTGGATTCGAACCCAGCAAGGCAGTGGCAGA GACACACGCGCCGGCCCGAAGTGGTCGAACGCTCCCGCCCGATCCTAAAA GACAAATGTGCCCCCAAGACAACATGGCAAAATGGGATCCGACGGAATTT GGGAAAGAAGGGCCCAAAACGGATTTTGGTGGCCAATTTCCTGCTTTAAA AAAATGGCTAGGGTGAAAAATCCCCAGAAATGTAGAATTTAGGGAATTTC CCAAACACTAAAATTTTATCCCAATTCGATGCTAAAAATCCCCAGATTTG GGGGATTTCCCTGAATCTGGCAACACTGATGGCCCTAGGATAAACCTACA GTTATTTGCTGCTTTGTGCACCAATTGACTAGCCGTGCGCATTCTATCAC ACTGCTGGAGACAAGGTTTGACCGAAGCATCTTATGTGAGCACCTTATAT AGCCAGCACCTTATATAGCCAGCACCTTCATTGTGTTTTTTTATACAGAA TATATTTAAAAAGGCACAATTTTCAATAAGGAAGAAGATGGCCAGGTTGG AAAAAAAAAATGTGGCTGCCTGATCGGATACCTTGGCTTTCGCCAAGGTA CTTTCGGCAGGGCACGTATATTGTGAGAAACACGTGTTTGCACATTCATT GATATCTTGAGACGTGTACACAACGTGTACACAAAGGGATTATGACAACA TTGATAAATAGTTGTAAAAAGGCTGTTATTTCCAGCAAGTGGTGCAATAA TTATGGAAATTTGGCCGAATTTCATTGGCGTCTGGCCGAGAGTGCTCGAA AAAAACTTGACGACCCTGTCCAACATGCAGCTGATTTATTTATTTTCAAA AATAACTTTTCCGCCAAACTTGTGACCCACATCTTCTTTAAAAAGAATTG TCGAACGGTTGCATACTGGTTAGAAAACCAAGTTCTGCAGATCAGAAATA ATATACTGCAACTCGCAGGAGCAATTTTTGAAAGCAATCGTTTACTGTTT TGAAAAATGCGGCGAACGTTTTTGGGTATCGCTGACAAATGATTGAATAT ATATTTTGGGGAGCATGTTGGCCCTAAAATAATGTTGAATCCAATGTGTG AAGCTAGTTTTACGAATATTGAAAGATATAGAAGTTGTTCATTGAAAACA CGGGTTCGGGGTTATCAGAGGGACCCTCCCACAAGCGAATGACTTACTTG ATTGACTTGAATGATGTGTTCCTTCTTTTGCTTCCTCCCGCGGCATCTTA AGTTGACTTGGTTTGTTAGCTAAATTTTAGATAATGACCAGAGGCTGTGG CTGTGGCTGCAGGTGAACTCAATTCCTCTTAACGTAAACTCGGATAGCCT TTTGGATAGCCAAATTTAGTTGGGTATGTTGTAAAGGAAGTCTATTGAAC ATATTATACACTTGGTTATCTGGAAGTTATCTGAAAATTCACCCCGGCCA TATGAAAGAAAAACGCACAGGCAAAAACAAGATTACTCTACTACGATTGT CCATCTTTCTAGACGACTTCCACGAAGGGCTTTACTTCATTTTGAAGAGC TTCTTGACAACGGATTAAAGAACGGGAGGAAAGAGGCTGTTTCCCCAATA TACGATTGGTTGATTCCATTCCAGCGTCACATAATGAGCCAGAAGTGGGA CGGACAATGGTGATAGCGAGCACCTTGCACACGAAGCAGCAACATCTGAC ATGACATTTGCCACGAGGTTCTCAAAAGATTGCGAGTCTCATTCTAGGGT TAAACGAGTCCACGGGAATGATTGGATATTGACAAAAAGAAGAGGGAACA CAATCCAAGGCAGGAAATCAATTAAAATTATTGATAATTAAGGTGGGGAA GACTCATGCTCATGTTGGCTGATGTTATTCTTTGATATGTACGATTTTAA CGATAATACGATGTGTGCTATTTTTCATTCTTACACGCCTTTTGTTGAGC TTTATATTGTTGTGTAAACATTCGCGTTCGCATTGTGTGTCGTTTAGTTC TGAAAAACAAGTATTGATCTGTAATGGCTAGTAAACATACATTGTGGGTT GGTTGTTTTCGTAAAATCAATTCAAGATGCAGTGCTCTACATTATGCTCA GTTATCAGGGATTGCATTGGAGTTTTCCAATGCATGATCTGTAGGCAATG ATGTAGGGAAGGTGGCTGAGACAGTGAAAGTAATGGCATATCAACAAAAA CGGCTTAAGAGATCTAGGAAATCAAGGAGTACCTTGCTGGCTATTTTGTT ACTCGATTGGTATGATTTTTATTATTATACCATGTGTGCTATTTTTTCAC TCTCTAGCGCCTTTTGTTGAGTTTTTAATGTGGTGTAAACATTTGTTGTG TTATGTATTATAATATGTACTTTTTTCTGTTTGGTAAAGTTTGTAAACAT CCATTGTCTGGTTAAGTTTAAACATTTATGTGTATTGGTTAGTTCTGGAC GCATTTCTTGATTTGTATAGGCTTCAACTCAAGGAAGCGTAGCCCCCTCC TCATATGACATTTTTTAGCCAATCAGAGTGGTGGCTCGATGATTTGCTTC TCTATATTTATTCCTCTGGCTGGCCTCACCCCCATGGGAGTCAACCACGC ACTCGGCCCTTGTCAGGTCCGTGGACCTTGGCCAAGCTCCTCCAGCAGTT TGGCCATTGTGTCGGCCATTCAGGTTTTAAATTAGTAACTTGAAATGCAG CTAACCTCGACTGTGGGATGAAGGCACTGTCCCTCTCCCACTCAATGACG TGGCGCTGATCACGGAGAGAGAGAAACCTCCAGCGTTGGTCTGATGTTTT ACTGTATCTGAGTATCCTAAGTTCCTCCCGTTGGTTCCACCAGGCGCCAG TATGAGGGTATTAATGATGGAAAACCGGACCTGGCTGTTAGAGTGGGTGT CTGCCTTAGGATAGACTTTGCCCATGGACATTATTGACACTCTTGTCTTG GCCACAATTATCATTTAGGGGGTTTGACCAATGGAGGTGCTAGAGGATGC CACCTAAAACCATTGCCCTATCTTCACCCAGATATTAAGGCCACAGCATC AGGACACTTAGAACATGCTCTGTTGTAACTTCACGTTGATTAGCAGCAAG GAACTCGAGGCCTCACTCTCAAGCTCTAGCCCTGGGATAGCATGCCTGAT CTGGCCAAAGTAGTCCTTTGCTTTCGAATTGCTAGCTCCAATTAAGGCCA TCCAGGTTAAAAATAACTCCAACCTTTTCCATCATAAAATGCGCTTGATC CGCAATCGAGCTTTGCCAAAAAAGGAGTACCACCCGATGCGGAACCAGGT TATGTTGGTGGTTAAAAGGACAAGTTGCTTGGAATACTTGGATGAGTTGC AGAAGTCCCACAACAATCCCAAGGGGCTCTGGGGCTTGGCCAATGCCCTT CTTGGCACACCCTTGAATGCTTTGTTGCCCACTTCCCTCCTCCTTAATGG GATTGCCACAGTAGGGAGCGACCAGACCGCTCAGGCAATGAATGGATTCT TTATTGATATGGTCGACAAATTGCTTCAAAATCTGGGCCTTGTCTCTCCA CCTGCCTTGGACTGGCCAACATCATCTGAGCCGTTCTTGTTCTCATTTGC TAGCACTGGTAAGAAAAAAGGTGGCCAACAAAAAACTGAGGTCATGTTCT CAAACTTAAAATACCACCCTTGGAGCCACTTTCCCTTTACGGGGAAAGCT GAGACTATGTGAATCAATGTAATGTGTCTACTTGGGGCTTACCCTAGACA CCAGACTTAAATCCACACCCATATCAAAAACAAGGTAAAACAGGCCAAGG GCTTACTCTTGGCTATCGTGTGCCACGCACAGGGCCTATTGCCAAAAATG TTATTTTGGGCCTACAAAGCCATTATGAGGCAGAACATTGCACATGGTTC TTGGGTGTGGGCTAGAACTGCATCAAACCCCGGGATAAGGAAAAAACTTT GTCAAGTTCAATGGACTTCACTTCATGAACCAAACCCTTAACGGTTTCCT CATGGGAGTGACCAAGCTTGGGAAAGCTACGGAGGATGGAATTGGGCAAC AGAAAGGCCATGGCGGTGGTTCGAAAGTGATGAGGAAGTGTCCATAGGTC CTATGGCAGTCGGGATGAAAATGGAGCGGGAGCTACGTTCCACTTCAAGT GAATACAATGCCAACAGATTTATTAACTCCTAGTATACTGCACTGCATAC CAGGCCAAGACCTTGAATGTAACTCAGACAGCTCTAGAAGCCAGGAGGCA ACTTTTGAAGCATGTCTGGAAAAAATGA
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Synonyms
The feature 'homeobox protein abdominal-' has the following synonyms
Synonym
Tk08586
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