nadh dehydrogenase, maker-scaffold44_size478958-snap-gene-1.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|82186892|sp|Q6PBH5.1|NDUA4_DANRE (RecName: Full=Cytochrome c oxidase subunit NDUFA4) HSP 1 Score: 46.595 bits (109), Expect = 7.935e-7 Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0 Query: 43 KSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSK--TEEPFNAYN-NKQFKFFNPAGHDYSKMNNEIPDY 116 K H AL PL +GG ++ Y RLA ++ D +W + EP+N N Q+K F+ DYSK+ + PD+ Sbjct: 7 KQLKSHPALIPLFIFIGGGATMSMLYLGRLALKNPDCSWDRKNNPEPWNKLGPNDQYKLFS-VNMDYSKLKKDRPDF 82
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|115502279|sp|Q0MQ98.1|NDUA4_GORGO (RecName: Full=Cytochrome c oxidase subunit NDUFA4) HSP 1 Score: 46.595 bits (109), Expect = 9.015e-7 Identity = 28/71 (39.44%), Postives = 39/71 (54.93%), Query Frame = 0 Query: 48 HKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTE-EPFNAYN-NKQFKFFNPAGHDYSKMNNEIPDY 116 H +L PL +G A Y RLA + DV W K++ EP+N N Q+KF++ DYSK+ E PD+ Sbjct: 12 HPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWDKSKPEPWNKLGPNDQYKFYS-VNVDYSKLKKERPDF 81
BLAST of nadh dehydrogenase vs. nr
Match: gi|961376908|gb|ALS05198.1| (NADH dehydrogenase [Tortanus dextrilobatus]) HSP 1 Score: 102.064 bits (253), Expect = 1.107e-25 Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 7 MRLSQYLNGFPKKGTYWEGEGGRGEMN-VRLPQGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTEE---PFNAYNNKQFKFFNPAGHDYSKMNNEIPDYK 117 M +S+ LN Y G+GGR N V QGLT KS HH AL PL AI+G MIF +Y FRLAT++TD+NWSK + P + Y N+QF+F NP+G DYSKM++ P Y+ Sbjct: 1 MFISRILNAVDHP--YITGKGGRKANNGVGSMQGLTIKSLKHHVALQPLFAIIGAGMIFVGSYVFRLATKTTDINWSKDKNPAGPMSYYENRQFQFLNPSGADYSKMSDVRPKYE 113
BLAST of nadh dehydrogenase vs. nr
Match: gi|961375394|gb|ALS04441.1| (NADH dehydrogenase [Acartia pacifica] >gi|961375396|gb|ALS04442.1| NADH dehydrogenase [Acartia pacifica] >gi|961375398|gb|ALS04443.1| NADH dehydrogenase [Acartia pacifica] >gi|961375400|gb|ALS04444.1| NADH dehydrogenase [Acartia pacifica]) HSP 1 Score: 92.4337 bits (228), Expect = 5.970e-22 Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 22 YWEGEGGRGEMNVRLPQGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTEE---PFNAYNNKQFKFFNPAGHDYSKMNNEIPDYK 117 Y G GGR N R+ QGLT +SF HHKAL PL A++G + +AY RLA ++TDVNW K ++ P+N Y+ KQFK NPAG DYS+ E P ++ Sbjct: 14 YMYGPGGRFANNRRM-QGLTWQSFKHHKALQPLFAVIGTGCVGVLAYLVRLAVKTTDVNWVKNKDPAYPYNYYDGKQFKLLNPAGVDYSQYGKERPRFE 111
BLAST of nadh dehydrogenase vs. nr
Match: gi|1325280090|ref|XP_023324705.1| (cytochrome c oxidase subunit NDUFA4-like [Eurytemora affinis]) HSP 1 Score: 90.1225 bits (222), Expect = 5.395e-21 Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 0 Query: 22 YWEGEGGRGEMNVRLP-QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTEEPFNA---YNNKQFKFFNPAGHDYSKMNNEIPDYK 117 Y G GGR N + QGLT KS HH AL PL AI+G IF AY +RLA ++TD+NW K + P N Y+ KQFKF NP+G DYSK + P ++ Sbjct: 14 YITGPGGRKANNGKGSMQGLTLKSLKHHVALQPLFAIIGAGCIFVGAYLYRLAAKTTDINWRKEKNPANTYGYYDGKQFKFMNPSGIDYSKYGQDRPKFE 113
BLAST of nadh dehydrogenase vs. nr
Match: gi|1325326081|ref|XP_023344889.1| (uncharacterized protein LOC111714087 isoform X1 [Eurytemora affinis] >gi|1325326083|ref|XP_023344890.1| uncharacterized protein LOC111714087 isoform X1 [Eurytemora affinis]) HSP 1 Score: 87.0409 bits (214), Expect = 8.072e-20 Identity = 48/101 (47.52%), Postives = 56/101 (55.45%), Query Frame = 0 Query: 20 GTYWEGEGGRGEMNVRLPQGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTEE---PFNAYNNKQFKFFNPAGHDYSKMNNEIPDYK 117 G Y EG+GGR N QG+T S HH AL PL IMG + A R AT++TDVNW K +E N Y KQFK NP G D +K + IPDYK Sbjct: 12 GGYLEGKGGRKMNNGTRMQGMTLASLRHHVALQPLFIIMGAGVTMVTAMCIRTATKTTDVNWRKIKEEDYAVNHYKAKQFKLLNPTGADLAK-PSPIPDYK 111
BLAST of nadh dehydrogenase vs. nr
Match: gi|1325324108|ref|XP_023343897.1| (cytochrome c oxidase subunit NDUFA4-like [Eurytemora affinis]) HSP 1 Score: 84.7297 bits (208), Expect = 7.031e-19 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 5 HIMRLSQYLNGFPKKGTYWEGEGGRGEMNVRLPQGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTEEPFNA---YNNKQFKFFNPAGHDYSKMNNEIPDY 116 HI R + G+ GT+ +GGR + N +PQGLT K+ H L PL I+ G M+ +YA R A +TDVNW K++ P++ Y+ KQ+KF NP+G DY + E P + Sbjct: 2 HITRCLRTNPGYIY-GTFKSSKGGRLQNN-SIPQGLTVKTLKRHYELQPLFGILAGAMVLVASYAIRAAVYATDVNWRKSKTPWDTYGYYDGKQYKFLNPSGIDYKEYGKERPRF 114
BLAST of nadh dehydrogenase vs. nr
Match: gi|907696855|ref|XP_013109088.1| (PREDICTED: cytochrome c oxidase subunit NDUFA4 [Stomoxys calcitrans]) HSP 1 Score: 70.0922 bits (170), Expect = 1.659e-13 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 0 Query: 38 QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTE--EPFNAYNNKQFKFFNPAGHDYSKMNNEIPDYK 117 QGL +S + AL PL +G + AV Y FRLATR+ DV W+++ EP+ Y NKQ+KF++P DYSK + PDY+ Sbjct: 2 QGLGLQSIKKNPALIPLYVCVGAGALGAVYYMFRLATRNPDVTWNRSSNPEPWQEYKNKQYKFYSPI-RDYSKTKSPAPDYE 82
BLAST of nadh dehydrogenase vs. nr
Match: gi|1339062873|ref|XP_023720106.1| (cytochrome c oxidase subunit NDUFA4 [Cryptotermes secundus] >gi|1330887438|gb|PNF20751.1| Cytochrome c oxidase subunit NDUFA4 [Cryptotermes secundus]) HSP 1 Score: 67.781 bits (164), Expect = 1.499e-12 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 38 QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTE--EPFNAYNNKQFKFFNPAGHDYSKMNNEIPDY 116 +GL+ S H AL PL A +G A+ Y RLA RS +V+W+K EP+N Y+NKQ KF++P DYSK+ + P Y Sbjct: 2 KGLSLSSLKSHPALIPLYACVGLGCCGALLYTLRLAVRSPEVSWNKKSNPEPWNEYSNKQHKFYSPV-RDYSKIESPAPKY 81
BLAST of nadh dehydrogenase vs. nr
Match: gi|1321329692|ref|XP_023307723.1| (cytochrome c oxidase subunit NDUFA4 [Lucilia cuprina] >gi|906465793|gb|KNC27373.1| hypothetical protein FF38_01120 [Lucilia cuprina]) HSP 1 Score: 67.3958 bits (163), Expect = 1.974e-12 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 38 QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSKTE--EPFNAYNNKQFKFFNPAGHDYSKMNNEIPDYKK 118 QGL +S + AL PL +G AV Y FRLATR+ DV W+++ EP+ Y +KQ+KF++P DYSK+ + P+Y++ Sbjct: 2 QGLGLQSIKKNPALIPLYVCVGAGACAAVFYIFRLATRNPDVTWNRSSNPEPWQEYKDKQYKFYSPI-RDYSKVKSPAPNYEE 83
BLAST of nadh dehydrogenase vs. nr
Match: gi|512908093|ref|XP_004926598.1| (cytochrome c oxidase subunit NDUFA4 [Bombyx mori]) HSP 1 Score: 67.0106 bits (162), Expect = 2.357e-12 Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 38 QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSK--TEEPFNAYNNKQFKFFNPAGHDYSKMNNEIPDY 116 QGL+ S HKAL PL +G AV Y RLA R+ DV+W+K EP+ AY NKQ+KF++P DYSK + P Y Sbjct: 2 QGLSLSSLKKHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPI-RDYSKEESPAPKY 81
BLAST of nadh dehydrogenase vs. nr
Match: gi|1344767634|ref|XP_023944399.1| (cytochrome c oxidase subunit NDUFA4 [Bicyclus anynana]) HSP 1 Score: 67.0106 bits (162), Expect = 2.383e-12 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 38 QGLTKKSFLHHKALWPLAAIMGGTMIFAVAYAFRLATRSTDVNWSK--TEEPFNAYNNKQFKFFNPAGHDYSKMNNEIPDY 116 +GLT KS HKAL PL +G AV Y RLATR+ DV+W+K EP+ Y +KQ+KF++P DYSK + P + Sbjct: 2 EGLTIKSLKKHKALIPLYVCVGLGCGMAVLYTLRLATRNPDVSWNKRTNPEPWQEYKDKQYKFYSP-NIDYSKTPSPAPKF 81 The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of nadh dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of nadh dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold44_size478958:171995..173403- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold44_size478958-snap-gene-1.17 ID=maker-scaffold44_size478958-snap-gene-1.17|Name=nadh dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=1409bp|location=Sequence derived from alignment at scaffold44_size478958:171995..173403- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nadh dehydrogenase' has the following synonyms
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