zinc finger protein c3h1 type-like 2-a-like, maker-scaffold460_size165339-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. L. salmonis genes
Match: EMLSAG00000012958 (supercontig:LSalAtl2s:LSalAtl2s98:1119919:1121441:-1 gene:EMLSAG00000012958 transcript:EMLSAT00000012958 description:"augustus_masked-LSalAtl2s98-processed-gene-11.4") HSP 1 Score: 65.855 bits (159), Expect = 6.449e-12 Identity = 41/123 (33.33%), Postives = 58/123 (47.15%), Query Frame = 0 Query: 236 KTILCKYYMKGNCVHGVK-CAFAHGERELLVTAQDKENQRHS--KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDK 355 KT LC++Y++GNC C FAHG +L + + K K+ C G C FG C F H E+++ K+ N L+KT C+ F ++G C C FA G +E R K Sbjct: 22 KTTLCQFYIQGNCNKSTDLCNFAHGTSDLRTPEGNPIGFEPTVDKYKSTLCAKFLSIGSCPFGVACRFAHGVRELRKPKNKNNP-----LFKTTLCKLFSESGFCPXAVNCQFAXGVAELRSK 139 HSP 2 Score: 56.6102 bits (135), Expect = 5.218e-9 Identity = 30/96 (31.25%), Postives = 51/96 (53.12%), Query Frame = 0 Query: 264 LVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR-----TKSPNQSQNVEKL-YKTEPCRHFFKTGVCMFGDKCMFAHGQSERR 353 L+ D N+ + KT C+ + C++G+KC F HS +E+++ +P+ + L +KT C ++ +TG C +GD C FAHG + R Sbjct: 224 LMHKNDNSNKFDATYKTTMCRKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKTVLCSNYTETGQCKYGDNCQFAHGSEQLR 319 HSP 3 Score: 54.6842 bits (130), Expect = 1.998e-8 Identity = 40/126 (31.75%), Postives = 58/126 (46.03%), Query Frame = 0 Query: 235 KKTILCKYYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQ---------RTKSPNQSQ-NVEKL-----YKTEPCRHFFKTGVCMFGDKCMF 345 K T+ K+ G+C GV C FAHG REL + +N+ + KT CK E+G+C C F E++ + SP + Q +EK YKT+ C + + C FG+ C F Sbjct: 68 KSTLCAKFLSIGSCPFGVACRFAHGVREL----RKPKNKNNPLFKTTLCKLFSESGFCPXAVNCQFAXGVAELRSKPIDSFELESLSPEERQRRLEKAKNTPGYKTKICSKYREHNHCEFGELCHF 189
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. L. salmonis genes
Match: EMLSAG00000006392 (supercontig:LSalAtl2s:LSalAtl2s350:328263:330663:1 gene:EMLSAG00000006392 transcript:EMLSAT00000006392 description:"maker-LSalAtl2s350-snap-gene-3.18") HSP 1 Score: 58.5362 bits (140), Expect = 3.310e-10 Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR 309 KT LC+ + + G C +G KC FAHG E+ K RH K KT CK H G+C +G +C F+H+ E+ + Sbjct: 86 KTELCRPFQESGTCKYGEKCQFAHGSGEV------KNITRHPKYKTDLCKTYHSIGFCPYGPRCHFIHNLNEMNK 154 HSP 2 Score: 52.373 bits (124), Expect = 3.696e-8 Identity = 27/82 (32.93%), Postives = 42/82 (51.22%), Query Frame = 0 Query: 276 SKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR-TKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKI 356 S+ KT+ C+ E+G C++G KC F H EV+ T+ P YKT+ C+ + G C +G +C F H +E + Sbjct: 83 SRYKTELCRPFQESGTCKYGEKCQFAHGSGEVKNITRHPK--------YKTDLCKTYHSIGFCPYGPRCHFIHNLNEMNKNV 156
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. L. salmonis genes
Match: EMLSAG00000007037 (supercontig:LSalAtl2s:LSalAtl2s39:49021:50052:1 gene:EMLSAG00000007037 transcript:EMLSAT00000007037 description:"maker-LSalAtl2s39-augustus-gene-0.20") HSP 1 Score: 53.9138 bits (128), Expect = 6.992e-9 Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0 Query: 205 SKKTQSQQQSGS--LERSS---GRYEPSPYSSYGNKKTILCKYYM-KGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLH 302 S T SQ +G+ L+ SS GR S Y KT +C+ + + C++G +C FAHG +L ++ R++K KTK C+ +GYC +G +C FLH Sbjct: 13 SSTTSSQHWTGTDLLQPSSAEGGRNSSSRY------KTEMCRNFKERSRCIYGEQCQFAHGRTDL------RDVVRNTKYKTKLCQKYWISGYCAYGPRCNFLH 104 HSP 2 Score: 50.447 bits (119), Expect = 9.861e-8 Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 276 SKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKICHKGLAIEES 366 S+ KT+ C+N E C +G +C F H T+++ + +N + YKT+ C+ ++ +G C +G +C F H D+ K LA+ E+ Sbjct: 40 SRYKTEMCRNFKERSRCIYGEQCQFAHGRTDLR-----DVVRNTK--YKTKLCQKYWISGYCAYGPRCNFLH------DEGIAKQLALSEA 117
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|81889079|sp|Q5ISE2.1|Z36L3_MOUSE (RecName: Full=mRNA decay activator protein ZFP36L3; AltName: Full=Zinc finger protein 36, C3H1 type-like 3; AltName: Full=zinc finger protein 36-like 3) HSP 1 Score: 70.4774 bits (171), Expect = 8.367e-12 Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQ 308 KT LC+ + + G C +G KC FAHG REL + RH K KT+PC+ H G+C +GT+C F+H+ E Q Sbjct: 124 KTELCRPFEESGICKYGHKCQFAHGYREL------RTLSRHPKYKTEPCRTFHSVGFCPYGTRCHFIHNQPEQQ 191 HSP 2 Score: 62.7734 bits (151), Expect = 2.459e-9 Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0 Query: 277 KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKICHKGL 361 + KT+ C+ E+G C++G KC F H E+ RT S YKTEPCR F G C +G +C F H Q E++ + L Sbjct: 122 RYKTELCRPFEESGICKYGHKCQFAHGYREL-RTLS------RHPKYKTEPCRTFHSVGFCPYGTRCHFIHNQPEQQPVLSESTL 199
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|1731429|sp|P47979.1|ZFS1_SCHPO (RecName: Full=Zinc finger protein zfs1; AltName: Full=Multicopy suppressor of overexpressed cyr1 protein 4) HSP 1 Score: 66.2402 bits (160), Expect = 9.930e-11 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 236 KTILCK-YYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQS 316 KT CK + + G C +G KC FAHG +EL KE RH K K++ C++ GYC +G +C FLH + Q++ + QS Sbjct: 328 KTEPCKNWQISGTCRYGSKCQFAHGNQEL------KEPPRHPKYKSERCRSFMMYGYCPYGLRCCFLHDESNAQKSATIKQS 403 HSP 2 Score: 59.6918 bits (143), Expect = 1.504e-8 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 272 NQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQS 350 N + + KT+PCKN +G C++G+KC F H E++ + P + YK+E CR F G C +G +C F H +S Sbjct: 321 NGKRALYKTEPCKNWQISGTCRYGSKCQFAHGNQELK--EPPRHPK-----YKSERCRSFMMYGYCPYGLRCCFLHDES 392
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|135863|sp|P23950.1|TISB_MOUSE (RecName: Full=mRNA decay activator protein ZFP36L1; AltName: Full=Butyrate response factor 1; AltName: Full=TPA-induced sequence 11b; AltName: Full=Zinc finger protein 36, C3H1 type-like 1; Short=ZFP36-like 1) HSP 1 Score: 64.3142 bits (155), Expect = 2.906e-10 Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 259 GERELLVTAQDKENQRHS-KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR-TKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKICHKGLAIEESKEDH 370 GER L Q Q +S + KT+ C+ E G C++G KC F H E++ T+ P YKTE CR F G C +G +C F H ERR + L+ + + H Sbjct: 95 GERLLPTQKQPGSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPK--------YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGGRDLSADRPRLQH 200 HSP 2 Score: 63.1586 bits (152), Expect = 7.346e-10 Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0 Query: 210 SQQQSGSLERSSGRYEPSPYSSYGNKKTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 +Q+Q GS + +S RY KT LC+ + + G C +G KC FAHG EL + RH K KT+ C+ H G+C +G +C F+H+ E Sbjct: 101 TQKQPGSGQVNSSRY-----------KTELCRPFEENGACKYGDKCQFAHGIHEL------RSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEE 181
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|135864|sp|P17431.1|TISB_RAT (RecName: Full=mRNA decay activator protein ZFP36L1; AltName: Full=Butyrate response factor 1; AltName: Full=EGF-inducible protein CMG1; AltName: Full=TPA-induced sequence 11b; AltName: Full=Zinc finger protein 36, C3H1 type-like 1; Short=ZFP36-like 1) HSP 1 Score: 64.3142 bits (155), Expect = 3.013e-10 Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 259 GERELLVTAQDKENQRHS-KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR-TKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKICHKGLAIEESKEDH 370 GER L Q Q +S + KT+ C+ E G C++G KC F H E++ T+ P YKTE CR F G C +G +C F H ERR + L+ + + H Sbjct: 95 GERLLPTQKQPGSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPK--------YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGGRDLSADRPRLQH 200 HSP 2 Score: 63.1586 bits (152), Expect = 7.549e-10 Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0 Query: 210 SQQQSGSLERSSGRYEPSPYSSYGNKKTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 +Q+Q GS + +S RY KT LC+ + + G C +G KC FAHG EL + RH K KT+ C+ H G+C +G +C F+H+ E Sbjct: 101 TQKQPGSGQVNSSRY-----------KTELCRPFEENGACKYGDKCQFAHGIHEL------RSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEE 181
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|1717819|sp|P47973.1|TTP_RAT (RecName: Full=mRNA decay activator protein ZFP36; AltName: Full=TPA-induced sequence 11; AltName: Full=Tristetraprolin; AltName: Full=Zinc finger protein 36; Short=Zfp-36) HSP 1 Score: 64.3142 bits (155), Expect = 3.421e-10 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 KT LC+ Y + G C +G KC FAHG EL ++ RH K KT+ C + G C +G++C F+H+PTE Sbjct: 98 KTELCRTYSESGRCRYGAKCQFAHGPGEL------RQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPTE 163 HSP 2 Score: 58.9214 bits (141), Expect = 1.670e-8 Identity = 27/75 (36.00%), Postives = 40/75 (53.33%), Query Frame = 0 Query: 277 KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSE 351 + KT+ C+ E+G C++G KC F H P E+++ N YKTE C F+ G C +G +C F H +E Sbjct: 96 RYKTELCRTYSESGRCRYGAKCQFAHGPGELRQA-------NRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPTE 163
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|1351254|sp|Q07352.1|TISB_HUMAN (RecName: Full=mRNA decay activator protein ZFP36L1; AltName: Full=Butyrate response factor 1; AltName: Full=EGF-response factor 1; Short=ERF-1; AltName: Full=TPA-induced sequence 11b; AltName: Full=Zinc finger protein 36, C3H1 type-like 1; Short=ZFP36-like 1) HSP 1 Score: 64.3142 bits (155), Expect = 3.715e-10 Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 259 GERELLVTAQDKENQRHS-KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQR-TKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRDKICHKGLAIEESKEDH 370 GER L Q Q +S + KT+ C+ E G C++G KC F H E++ T+ P YKTE CR F G C +G +C F H ERR + L+ + + H Sbjct: 95 GERLLPTQKQPGGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPK--------YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGARDLSADRPRLQH 200 HSP 2 Score: 62.003 bits (149), Expect = 2.011e-9 Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0 Query: 210 SQQQSGSLERSSGRYEPSPYSSYGNKKTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 +Q+Q G + +S RY KT LC+ + + G C +G KC FAHG EL + RH K KT+ C+ H G+C +G +C F+H+ E Sbjct: 101 TQKQPGGGQVNSSRY-----------KTELCRPFEENGACKYGDKCQFAHGIHEL------RSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEE 181
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|135862|sp|P22893.1|TTP_MOUSE (RecName: Full=mRNA decay activator protein ZFP36; AltName: Full=Growth factor-inducible nuclear protein NUP475; AltName: Full=TPA-induced sequence 11; AltName: Full=Tristetraprolin; AltName: Full=Zinc finger protein 36; Short=Zfp-36) HSP 1 Score: 63.5438 bits (153), Expect = 5.773e-10 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 KT LC+ Y + G C +G KC FAHG EL ++ RH K KT+ C + G C +G++C F+H+PTE Sbjct: 97 KTELCRTYSESGRCRYGAKCQFAHGLGEL------RQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPTE 162 HSP 2 Score: 54.6842 bits (130), Expect = 3.832e-7 Identity = 26/75 (34.67%), Postives = 39/75 (52.00%), Query Frame = 0 Query: 277 KVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSE 351 + KT+ C+ E+G C++G KC F H E+++ N YKTE C F+ G C +G +C F H +E Sbjct: 95 RYKTELCRTYSESGRCRYGAKCQFAHGLGELRQA-------NRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPTE 162
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|54036437|sp|Q6S9E0.1|TTP_SHEEP (RecName: Full=mRNA decay activator protein ZFP36; AltName: Full=Tristetraprolin; Short=TTP; AltName: Full=Zinc finger protein 36; Short=Zfp-36) HSP 1 Score: 60.4622 bits (145), Expect = 5.134e-9 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 KT LC+ + + G C +G KC FAHG EL ++ RH K KT+ C + G C +G++C F+H+P+E Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGEL------RQPSRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSE 168 HSP 2 Score: 54.6842 bits (130), Expect = 4.549e-7 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 0 Query: 277 KVKTKPCKNLHETGYCQFGTKCLFLHSPTEV-QRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSE 351 + KT+ C+ E+G C++G KC F H E+ Q ++ P YKTE C F+ G C +G +C F H SE Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAHGLGELRQPSRHPK--------YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|1717818|sp|P53781.1|TTP_BOVIN (RecName: Full=mRNA decay activator protein ZFP36; AltName: Full=Tristetraprolin; Short=TTP; AltName: Full=Zinc finger protein 36; Short=Zfp-36) HSP 1 Score: 60.4622 bits (145), Expect = 5.343e-9 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0 Query: 236 KTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTE 306 KT LC+ + + G C +G KC FAHG EL ++ RH K KT+ C + G C +G++C F+H+P+E Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGEL------RQASRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSE 168 HSP 2 Score: 54.6842 bits (130), Expect = 3.782e-7 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 0 Query: 277 KVKTKPCKNLHETGYCQFGTKCLFLHSPTEV-QRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSE 351 + KT+ C+ E+G C++G KC F H E+ Q ++ P YKTE C F+ G C +G +C F H SE Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPK--------YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Match: gi|122230766|sp|Q10MN8.1|C3H21_ORYSJ (RecName: Full=Putative zinc finger CCCH domain-containing protein 21; Short=OsC3H21) HSP 1 Score: 61.2326 bits (147), Expect = 5.428e-9 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 0 Query: 233 GNKKTILCKYYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKS 312 G KT LC + +G C +G +C FAHG +EL + RH + KT PC+ C +G +C F HSP +S Sbjct: 381 GAAKTELCNKWERGACPYGARCRFAHGLQEL------RPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHSPLRAAAAES 454
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Match: gi|548540648|ref|XP_005753033.1| (PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Pundamilia nyererei] >gi|554871025|ref|XP_005945473.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Haplochromis burtoni]) HSP 1 Score: 85.1149 bits (209), Expect = 7.375e-15 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 0 Query: 226 PSPYSSYGNKKTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRD 354 P P+ KT LC Y G C + +C FAHG EL V + H K KT+ C++ H GYC +G +CLF+HSPTE + T + +NV PCR F G+C FG +C F H + + D Sbjct: 51 PIPWVCSTRYKTELCTTYSDDGFCKYAERCQFAHGLHELHVPSH------HPKYKTELCRSYHTDGYCYYGNRCLFVHSPTEQRPTL--RRRRNV-------PCRTFRAFGICPFGTRCNFLHVEGKDED 165
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Match: gi|1338797786|ref|XP_023696125.1| (mRNA decay activator protein ZFP36L2-like [Paramormyrops kingsleyae]) HSP 1 Score: 85.1149 bits (209), Expect = 8.043e-15 Identity = 49/122 (40.16%), Postives = 64/122 (52.46%), Query Frame = 0 Query: 227 SPYSSYGNKKTILC-KYYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAH 347 SP+ KT LC +Y G+C + +C FAHG +L V + RH K KT+ C H GYC +G +CLF+H P E QR P + +N+ PCR F GVC FG +C F H Sbjct: 57 SPWLCSTRYKTELCSRYAETGSCKYAERCQFAHGLHDLRVPS------RHPKYKTELCHAFHTVGYCAYGARCLFVHGPEE-QRQVRPRR-RNI-------PCRTFRSFGVCPFGARCNFLH 163
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Match: gi|62204272|gb|AAH92716.1| (Cth1 protein, partial [Danio rerio]) HSP 1 Score: 83.9593 bits (206), Expect = 8.576e-15 Identity = 49/122 (40.16%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 227 SPYSSYGNKKTILC-KYYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAH 347 +P+ KT LC +Y G C + +C FAHG +L V + RH K KT+ C+ H GYC +GT+CLF+H+ E QR P + +NV PCR F GVC FG++C F H Sbjct: 90 TPWLCSTRYKTELCSRYAETGTCKYAERCQFAHGLHDLHVPS------RHPKYKTELCRTYHTAGYCVYGTRCLFVHNLKE-QRPIRPRR-RNV-------PCRTFRAFGVCPFGNRCHFLH 196
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Match: gi|499047616|ref|XP_004574367.1| (mRNA decay activator protein ZFP36L2 [Maylandia zebra]) HSP 1 Score: 84.7297 bits (208), Expect = 9.841e-15 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 0 Query: 226 PSPYSSYGNKKTILCKYYMK-GNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAHGQSERRD 354 P P+ KT LC Y G C + +C FAHG EL V + H K KT+ C++ H GYC +G +CLF+HSPTE + T + +NV PCR F G+C FG +C F H + + D Sbjct: 51 PIPWVCSTRYKTELCTTYSDDGFCKYAERCQFAHGLHELHVPSH------HPKYKTELCRSYHTDGYCYYGNRCLFVHSPTEQRPTL--RRRRNV-------PCRTFRAFGICPFGTRCNFLHVEGKDED 165
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Match: gi|1024968596|ref|XP_016305609.1| (PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 84.7297 bits (208), Expect = 1.084e-14 Identity = 54/148 (36.49%), Postives = 75/148 (50.68%), Query Frame = 0 Query: 227 SPYSSYGNKKTILC-KYYMKGNCVHGVKCAFAHGERELLVTAQDKENQRHSKVKTKPCKNLHETGYCQFGTKCLFLHSPTEVQRTKSPNQSQNVEKLYKTEPCRHFFKTGVCMFGDKCMFAH--GQSE----RRDKICHKGLAIEESK 367 +P+ KT LC +Y G C + +C FAHG ++L V + RH K KT+ C+ H GYC +GT+CLF+HS E K P++ + + PCR F GVC FG +C F H G SE ++ C L +E K Sbjct: 45 TPWLCSTRYKTELCSRYAETGTCKYAERCQFAHGLQDLHVPS------RHPKYKTELCRTYHTAGYCVYGTRCLFVHSLKE----KRPDRQRR-----RNVPCRTFRAFGVCPFGTRCHFLHVEGGSESDGREEERTCQPSLPSQEWK 177 The following BLAST results are available for this feature:
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of zinc finger protein c3h1 type-like 2-a-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of zinc finger protein c3h1 type-like 2-a-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold460_size165339:35829..59579+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold460_size165339-snap-gene-0.24 ID=maker-scaffold460_size165339-snap-gene-0.24|Name=zinc finger protein c3h1 type-like 2-a-like|organism=Tigriopus kingsejongensis|type=gene|length=23751bp|location=Sequence derived from alignment at scaffold460_size165339:35829..59579+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'zinc finger protein c3h1 type-like 2-a-like' has the following synonyms
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