translocon-associated protein subunit alpha, maker-scaffold462_size163801-snap-gene-0.51 (gene) Tigriopus kingsejongensis

Overview
Nametranslocon-associated protein subunit alpha
Unique Namemaker-scaffold462_size163801-snap-gene-0.51
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of translocon-associated protein subunit alpha vs. L. salmonis genes
Match: EMLSAG00000003332 (supercontig:LSalAtl2s:LSalAtl2s182:508177:513319:1 gene:EMLSAG00000003332 transcript:EMLSAT00000003332 description:"maker-LSalAtl2s182-augustus-gene-5.27")

HSP 1 Score: 306.22 bits (783), Expect = 4.544e-105
Identity = 152/218 (69.72%), Postives = 185/218 (84.86%), Query Frame = 0
Query:   76 KYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTNDDVDYEWIPRTALRTPGSSQTSPKQRKAKRNAASDSD 293
            K VS DA+T +LFT PT      ELPAG++VEFLVGFTNKGDSD +VE+LDASFRYPM+F YHIQNFSAI+YQKTVKP+  ATVAYSFIPAD+FAGR IGLTINLAYRD++GN + DPVFN+TVQIVEFDEGFD+EVFFMY+F++AG +L LFL F+FL  K+  KKS A  + +ETGT+NDDVDYEWI ++ LRTP S++TSP+QRK+ ++A SD+D
Sbjct:   55 KNVSPDAETTILFTNPTIRTSVXELPAGRLVEFLVGFTNKGDSDLMVESLDASFRYPMEFKYHIQNFSAISYQKTVKPKTXATVAYSFIPADAFAGRPIGLTINLAYRDLQGNSYLDPVFNETVQIVEFDEGFDSEVFFMYLFLIAGCILLLFLVFSFLQSKASKKKSPA-ARPVETGTSNDDVDYEWIXKSTLRTPKSTKTSPRQRKSNKSAGSDTD 271          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|22261821|sp|P43307.3|SSRA_HUMAN (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 191.43 bits (485), Expect = 2.049e-58
Identity = 103/234 (44.02%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   61 DSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR--TPGSSQTSPKQRKAKRNAASD 291
            D   +D +GE        S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV ++E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L      S +  P++R  KR+  SD
Sbjct:   67 DKEEEDVSGE-----PEASPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLL----ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSD 285          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|71162389|sp|Q5R4X4.1|SSRA_PONAB (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 191.43 bits (485), Expect = 2.291e-58
Identity = 104/239 (43.51%), Postives = 141/239 (59.00%), Query Frame = 0
Query:   61 DSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTAL-------RTPGSSQTSPKQRKAKRNAASD 291
            D   +D +GE        S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV ++E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L       R   S +  P++R  KR+  SD
Sbjct:   67 DKEEEDVSGE-----PEASPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLL----ESRKRKRPVQKVEMGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRAQKRSVGSD 290          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|187611488|sp|A6QLP7.1|SSRA_BOVIN (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 186.422 bits (472), Expect = 2.069e-56
Identity = 116/285 (40.70%), Postives = 157/285 (55.09%), Query Frame = 0
Query:   29 TLIQLTQSGSSIWVAAQEDEAEEEGAVDDDEV-------------------DSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR--TPGSSQTSPKQRKAKRNAASD 291
            TL+     G S+ VA  +D  E+E  V+D  +                   D   DD +GE        S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV I+E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L      S +  P++R  KR+  SD
Sbjct:   18 TLLLRVGPGGSLAVA--QDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEDDVSGE-----PEASPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL----ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSD 285          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|71162388|sp|Q9CY50.1|SSRA_MOUSE (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 185.267 bits (469), Expect = 6.076e-56
Identity = 109/276 (39.49%), Postives = 154/276 (55.80%), Query Frame = 0
Query:   33 LTQSGSSIWVAAQEDEAEEEGAVDDDEVDSA--------------TDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR--TPGSSQTSPKQRKAKRNAASD 291
            L + G    +A  +D  E+E  V+D  ++                 +D   E+   +   S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV ++E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L      S +  P++R  KR+  SD
Sbjct:   20 LLRGGPGGSLALAQDPTEDEEIVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSSEPEASPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL----ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRQPRKRAQKRSVGSD 285          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|134930|sp|P16967.1|SSRA_CANFA (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=PGP35; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 184.496 bits (467), Expect = 9.972e-56
Identity = 104/234 (44.44%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   61 DSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR--TPGSSQTSPKQRKAKRNAASD 291
            D   +D +GE        S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV I+E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L      S +  P++R  KR+  SD
Sbjct:   67 DKEEEDVSGE-----PEASPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL----ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSD 285          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|1174450|sp|P45433.1|SSRA_ONCMY (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 178.718 bits (452), Expect = 2.037e-53
Identity = 101/227 (44.49%), Postives = 136/227 (59.91%), Query Frame = 0
Query:   62 SATDDSAGEEGVEKKYVSA-DADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALRTPGSSQTSPKQRKAKR 286
            S T+D   E+       S  DADT ++F      V   E PA ++V+FLVGFTNKG  DF V +L+ASFRYP DF ++IQNF+A+     V+PQ++A+  YSFIPA   AGR  GL I L Y+D EGN F   ++NQTV IVE +EG D E  FMY+F+    +LA+F  +  L  +S+++K    P ++ETGT   + VD  WIP+  L     +  SPK    KR
Sbjct:   63 SETEDDIDEDAAVGDVTSHPDADTTIVF------VTGEEFPANEIVKFLVGFTNKGSQDFTVHSLEASFRYPQDFQFYIQNFTALPLSTVVQPQKQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNGFQTAIYNQTVTIVELEEGLDGETIFMYIFLTGLVVLAVFGMYQVL--ESRTRKRF--PVKVETGTGGMNGVDISWIPQETLNIMSKASASPKASPRKR 279          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|1711549|sp|P53815.1|SSRA_RABIT (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 176.407 bits (446), Expect = 1.602e-52
Identity = 99/234 (42.31%), Postives = 137/234 (58.55%), Query Frame = 0
Query:   61 DSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR--TPGSSQTSPKQRKAKRNAASD 291
            D   +D +GE        S  ADT +LF      V   + PA  +V FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D  GN F D VFNQTV ++E ++G D +  FMY+ +   GLL +      L  +++ +    P +++E GT++ +DVD  WIP+  L      S +  P++R  KR+  SD
Sbjct:   67 DREEEDVSGE-----PEASPSADTTILF------VKGEDFPANNIVRFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDFNGNVFQDAVFNQTVTVIEREDGLDGQTIFMYMSLAGLGLLVVVGLHQLLESRNRKR----PIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRPQKRSVGSD 285          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|71162390|sp|Q7TPJ0.1|SSRA_RAT (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Liver regeneration-related protein LRRG137; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 174.096 bits (440), Expect = 2.476e-51
Identity = 92/192 (47.92%), Postives = 123/192 (64.06%), Query Frame = 0
Query:   79 SADADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTAL 269
            S  ADT +LF      V   + PA  +V+FLVGFTNKG  DF+VE+LDASFRYP D+ ++IQNF+A+     V PQ +AT  YSFIPA+   GR  GL INL Y+D+ GN F D VFNQTV ++E ++G D E  FMY+F+   GLL +      L    +S+K   P +++E GT++ +DVD  WIP+  L
Sbjct:   81 SPSADTTILF------VKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLL----ESRKRKRPIQKVEMGTSSQNDVDMSWIPQETL 262          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|74854643|sp|Q54R45.1|SSRA_DICDI (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 85.5001 bits (210), Expect = 1.712e-18
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 0
Query:  102 AGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGG----------KSKSKKSMAPPKQMETGTTNDDVDYEWIPRTA 268
            AG +VE LVGFTN  D    +  + AS  +P DFS  IQN++   +   V+    AT+AY F+P++    R  GL I+L Y+D   N F    FN T+ I E +  FD + FF+           + L   F+GG          K K  ++++   +       +D   EW+  T+
Sbjct:   55 AGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYTRGDFGIAVEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQN-FTQTFFNSTINITEKETSFDMDSFFL-----------ILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVETEDETAEWLSGTS 219          
BLAST of translocon-associated protein subunit alpha vs. SwissProt
Match: gi|26007030|sp|P45434.3|SSRA_ARATH (RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flags: Precursor)

HSP 1 Score: 52.373 bits (124), Expect = 8.970e-7
Identity = 43/166 (25.90%), Postives = 75/166 (45.18%), Query Frame = 0
Query:   42 VAAQEDEAEEEGAVDDDEVDSATDDSAGEEGVEKKYVSAD---ADTFLLFTRPTTTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQE-EATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVE 203
            VA  + +AE+  ++ DD V   TDD+  E+  +     +     +T  +F + +  +    +PAG+  E LVG  N+G +   V  + AS   P D    +QN + +       P   +AT  Y F  +      +  L   + Y D+EG  +    +N T+++VE
Sbjct:   21 VARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDLDMNLSSFPGVETVCVFPKNSAKL----VPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIY-DVEGKPYQSVFYNGTIEVVE 181          
BLAST of translocon-associated protein subunit alpha vs. nr
Match: gi|907610745|ref|XP_013117184.1| (PREDICTED: translocon-associated protein subunit alpha [Stomoxys calcitrans])

HSP 1 Score: 245.358 bits (625), Expect = 8.202e-77
Identity = 139/290 (47.93%), Postives = 186/290 (64.14%), Query Frame = 0
Query:   16 MNRWFLLLLVVTPTLIQLTQSGSSIWVAAQEDEAEEE--GAVDDDEVDSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGA-VELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTND-DVDYEWIPRTALR----------TPGSS-----QTSPKQRKAKR 286
            M  + L+LL+V PT+I  T +G + + A  ED AE++   A  DD   +  D  A ++    +  S  ADTFLLFT+PT T G  ++LP G+ VEFL+GFTNKG +DFVVE+++ASFRYPMDF+Y+IQNFSAIAY + VKP  EATV+YSF+P+D FAGR  GL I + YRD  G  F + VFN+TV I E DEG D E FF+Y+ M    +L L +   +L G S  +K  A  K +ETGT+ND  +DYEW+P+  LR          TP +S     Q+SPKQ ++ +
Sbjct:    1 MKNYMLILLLVLPTII-CTFNGPNKFSAFAEDAAEDDIVEADGDDGSVTGEDAEADDDSEPLQTTSPYADTFLLFTKPTYTAGQQLDLPGGKPVEFLIGFTNKGPNDFVVESVEASFRYPMDFNYYIQNFSAIAYNREVKPGSEATVSYSFMPSDQFAGRPFGLNIAMNYRDSNGVQFSEAVFNETVLISEVDEGLDGETFFLYLLMAGVVVLLLVIGQQYLLGSSGKRKRSAAKKTIETGTSNDSSIDYEWLPQETLRALQKSSPKAKTPKTSPKAAKQSSPKQTQSPK 289          
BLAST of translocon-associated protein subunit alpha vs. nr
Match: gi|1218210246|ref|XP_021711976.1| (translocon-associated protein subunit alpha-like [Aedes aegypti] >gi|1218218127|ref|XP_021711326.1| translocon-associated protein subunit alpha [Aedes aegypti])

HSP 1 Score: 244.588 bits (623), Expect = 1.265e-76
Identity = 152/289 (52.60%), Postives = 190/289 (65.74%), Query Frame = 0
Query:   16 MNRWFLLLLVVTPTLIQLTQSGSSIWVAAQEDEAEEEGAVD---DDEVDSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGA-VELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR----TPG----SSQTSPKQRKAKRNAASD 291
            M   F+  L+V P ++     GS +   A EDE +EE  V+   DD   + TD++  ++  E    S DADTFLLFTRP  + G+ +ELPAG  VEFLVGF NKG  DF+VET++ASFRYPMDF+Y IQNFSAIAY + +KP  EATV+YSF+P++SFAGR  GL I L YRD  GN F + VFN+TV I E DEG D E FF+YVF+ A  +L L L   FLG   K K+S A  K +ETGTTN  DVDY+WIP   L+    +P     S + SP+QRKAKR+A SD
Sbjct:    1 MKGLFIFALLVLPAVLLTVDGGSRLMAYASEDELDEELDVEVESDDASVTQTDEAETDDEPETT-KSPDADTFLLFTRPLHSSGSQLELPAGYPVEFLVGFANKGSDDFIVETVEASFRYPMDFNYFIQNFSAIAYNREIKPGHEATVSYSFLPSESFAGRPFGLNIALNYRDASGNQFSEAVFNETVSITEVDEGLDGETFFLYVFLAAVVVLLLVLGQQFLGSYGKRKRSPAVRKTVETGTTNTKDVDYDWIPAETLKKIQNSPKGGKVSPKQSPRQRKAKRSAGSD 288          
BLAST of translocon-associated protein subunit alpha vs. nr
Match: gi|815808731|ref|XP_012225210.1| (PREDICTED: translocon-associated protein subunit alpha [Linepithema humile])

HSP 1 Score: 244.202 bits (622), Expect = 1.347e-76
Identity = 133/294 (45.24%), Postives = 188/294 (63.95%), Query Frame = 0
Query:   16 MNRWFLLLLVVTPTLIQLTQSGSSIWVAAQEDE---------AEEEGAVDDDEVDSATDDSAGEEGVEKKYVSADADTFLLFTRPT-TTVGAVELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLA---FNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTAL----RTPGSSQTSPKQRKAKRNAASD 291
            M ++ + L+ +   L  +   G S++  AQEDE          EE   + D+EV+  T ++           SADADT +LFT+P    +  +ELPAG +VEFLVGFTNKG+SDFV+E+LDASFRY MDF+++IQNFS   + K VK + EAT+AYSFIP++SFAGR  GL +NL YRD+ G  + + VFN+TVQI+E D+G D E  F+YVF++A  +L L       + LG KS+S  +   P +M  GT+N ++VDY+W+P+  L    ++P + + SP+QRK KR A SD
Sbjct:    1 MKKFSIFLVFIVSALALVANGGYSVY--AQEDENIDDIVDVEGEEGTIITDEEVEEDTSNA-----------SADADTTILFTKPIHNALSTLELPAGNIVEFLVGFTNKGESDFVLESLDASFRYAMDFNFYIQNFSTFTFNKVVKSKHEATLAYSFIPSESFAGRPFGLNVNLNYRDVNGVSYNEAVFNETVQIIEIDDGLDGETIFLYVFLIACVILTLVGGQQLLSSLGRKSRSSITRKAPVEM--GTSNPNNVDYDWLPKETLNRINKSPRTPKQSPRQRKTKRTAGSD 279          
BLAST of translocon-associated protein subunit alpha vs. nr
Match: gi|1218211631|ref|XP_021712582.1| (LOW QUALITY PROTEIN: translocon-associated protein subunit alpha-like [Aedes aegypti])

HSP 1 Score: 244.202 bits (622), Expect = 1.606e-76
Identity = 152/289 (52.60%), Postives = 190/289 (65.74%), Query Frame = 0
Query:   16 MNRWFLLLLVVTPTLIQLTQSGSSIWVAAQEDEAEEEGAVD---DDEVDSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGA-VELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTN-DDVDYEWIPRTALR----TPG----SSQTSPKQRKAKRNAASD 291
            M   F+  L+V P ++     GS +   A EDE +EE  V+   DD   + TD++  ++  E    S DADTFLLFTRP  + G+ +ELPAG  VEFLVGF NKG  DF+VET++ASFRYPMDF+Y IQNFSAIAY + +KP  EATV+YSF+P++SFAGR  GL I L YRD  GN F + VFN+TV I E DEG D E FF+YVF+ A  +L L L   FLG   K K+S A  K +ETGTTN  DVDY+WIP   L+    +P     S + SP+QRKAKR+A SD
Sbjct:    1 MKGLFIFALLVLPAVLLTVDGGSRLMAYASEDELDEELDVEVESDDASVTQTDEAETDDEPETT-KSPDADTFLLFTRPLHSSGSQLELPAGYPVEFLVGFANKGSDDFIVETVEASFRYPMDFNYFIQNFSAIAYNREIKPGHEATVSYSFLPSESFAGRPFGLNIALNYRDASGNQFSEAVFNETVSITEXDEGLDGETFFLYVFLAAVVVLLLVLGQQFLGSYGKRKRSPAVRKTVETGTTNTKDVDYDWIPAETLKKIQNSPKGGKVSPKQSPRQRKAKRSAGSD 288          
BLAST of translocon-associated protein subunit alpha vs. nr
Match: gi|1098613255|ref|XP_018801302.1| (PREDICTED: translocon-associated protein subunit alpha [Bactrocera latifrons])

HSP 1 Score: 244.588 bits (623), Expect = 1.736e-76
Identity = 142/301 (47.18%), Postives = 180/301 (59.80%), Query Frame = 0
Query:   16 MNRWFLLLLVVTPTLIQLTQSGSSIWVAAQEDEAE--------EEGAVDDDEVDSATDDSAGEEGVEKKYVSADADTFLLFTRPTTTVGA-VELPAGQMVEFLVGFTNKGDSDFVVETLDASFRYPMDFSYHIQNFSAIAYQKTVKPQEEATVAYSFIPADSFAGRSIGLTINLAYRDIEGNFFFDPVFNQTVQIVEFDEGFDTEVFFMYVFMVAGGLLALFLAFNFLGGKSKSKKSMAPPKQMETGTTND-DVDYEWIPRTALRT---------------PGSSQT-----SPKQRKAKR 286
            M   FL+LL+V P LI  T      + A  E  AE        E+GAV  D+VD+  D  A          S  ADT+LLFT+P  T G  ++LP G+ VEFL+GFTNKG ++FV+ET++ASFRYPMDF+YHIQNFSA+AY + VKP  EATVAYSF+P+D+FAGR  GL I L YRD  G  F + VFN+TV I E DEG D E FF+YV +    +L L +   +L G S  +K  A  K +ETGT ND +++YEW+P+  LR                PG   +     SPKQRK KR
Sbjct:    1 MKSNFLILLLVVPALI-CTFHAPHKFAAFAEGSAEDDLVDVEGEDGAVTGDDVDNEEDADASVT------TSPYADTYLLFTKPLYTAGQQLDLPGGKPVEFLIGFTNKGKNEFVIETVEASFRYPMDFNYHIQNFSAVAYNREVKPGSEATVAYSFMPSDTFAGRPFGLNIALNYRDGNGAQFTEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKTIETGTANDSNIEYEWLPQETLRVLQQSPKSKTSKTSPKPGKQSSPKQGQSPKQRKVKR 294          
The following BLAST results are available for this feature:
BLAST of translocon-associated protein subunit alpha vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000033324.544e-10569.72supercontig:LSalAtl2s:LSalAtl2s182:508177:513319:1... [more]
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BLAST of translocon-associated protein subunit alpha vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
gi|22261821|sp|P43307.3|SSRA_HUMAN2.049e-5844.02RecName: Full=Translocon-associated protein subuni... [more]
gi|71162389|sp|Q5R4X4.1|SSRA_PONAB2.291e-5843.51RecName: Full=Translocon-associated protein subuni... [more]
gi|187611488|sp|A6QLP7.1|SSRA_BOVIN2.069e-5640.70RecName: Full=Translocon-associated protein subuni... [more]
gi|71162388|sp|Q9CY50.1|SSRA_MOUSE6.076e-5639.49RecName: Full=Translocon-associated protein subuni... [more]
gi|134930|sp|P16967.1|SSRA_CANFA9.972e-5644.44RecName: Full=Translocon-associated protein subuni... [more]
gi|1174450|sp|P45433.1|SSRA_ONCMY2.037e-5344.49RecName: Full=Translocon-associated protein subuni... [more]
gi|1711549|sp|P53815.1|SSRA_RABIT1.602e-5242.31RecName: Full=Translocon-associated protein subuni... [more]
gi|71162390|sp|Q7TPJ0.1|SSRA_RAT2.476e-5147.92RecName: Full=Translocon-associated protein subuni... [more]
gi|74854643|sp|Q54R45.1|SSRA_DICDI1.712e-1831.07RecName: Full=Translocon-associated protein subuni... [more]
gi|26007030|sp|P45434.3|SSRA_ARATH8.970e-725.90RecName: Full=Translocon-associated protein subuni... [more]
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BLAST of translocon-associated protein subunit alpha vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|907610745|ref|XP_013117184.1|8.202e-7747.93PREDICTED: translocon-associated protein subunit a... [more]
gi|1218210246|ref|XP_021711976.1|1.265e-7652.60translocon-associated protein subunit alpha-like [... [more]
gi|815808731|ref|XP_012225210.1|1.347e-7645.24PREDICTED: translocon-associated protein subunit a... [more]
gi|1218211631|ref|XP_021712582.1|1.606e-7652.60LOW QUALITY PROTEIN: translocon-associated protein... [more]
gi|1098613255|ref|XP_018801302.1|1.736e-7647.18PREDICTED: translocon-associated protein subunit a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold462_size163801supercontigscaffold462_size163801:114300..115692 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:endoplasmic reticulum
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold462_size163801-snap-gene-0.51-mRNA-1maker-scaffold462_size163801-snap-gene-0.51-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold462_size163801:114300..115692-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold462_size163801-snap-gene-0.51 ID=maker-scaffold462_size163801-snap-gene-0.51|Name=translocon-associated protein subunit alpha|organism=Tigriopus kingsejongensis|type=gene|length=1393bp|location=Sequence derived from alignment at scaffold462_size163801:114300..115692- (Tigriopus kingsejongensis)
TGATCCGCCAGCAGGTCGCCGAAGCCTTCAAGTGGGAGCGAATCGCGATC GACCAACCACTCCGCTCATTTGTTCATCCCGCATCGAGGCCCAAACTCGC CGAGGCTCGCCATCATGAACCGCTGGTTCCTATTGCTGCTCGTGGTCACG CCCACCTTGATCCAGCTCACTCAATCGGGTAAGACGGGGATGCTGGAGAC ACCGCCGAGGCCGGTCGGAGGGTAACGACGGGATTTCCGCCTTTCAGGCT CGTCGATCTGGGTGGCTGCCCAAGAGGATGAGGCTGAGGAGGAGGGGGCT GTGGACGACGACGAGGTGGATAGCGCTACCGATGACTCGGCGGGTGAGGA AGGCGTTGAGAAGAAGTACGTGTCGGCCGACGCCGACACGTTCTTGCTCT TCACCAGGCCCACCACGACCGTGGGTGCCGTAGAGTTGCCCGCCGGCCAG ATGGTCGAGTTCCTCGTGGGCTTCACCAACAAGGGCGACTCGGACTTTGT CGTGGAAACCTTGGATGCCAGCTTCCGCTACCCCATGGACTTCAGCTATC ACATCCAAAATTTCTCGGCCATTGCCTACCAGAAGACCGTCAAACCCCAG GAGGAGGCCACCGTGGCTTACTCGTTCATCCCGGCCGACTCCTTCGCTGG ACGCTCCATCGGCCTCACCATCAACCTGGCTTATCGAGACATTGAGGGCA ACTTCTTCTTCGATCCCGTCTTCAATCAAACCGTCCAGATTGTCGAGTTC GACGAAGGCTTCGACACCGAGGTGTTCTTCATGTACGTGTTCATGGTGGC CGGTGGCCTCCTAGCGCTTTTTCTTGCCTTCAACTTTCTGGGGGGCAAGT CCAAGAGCAAGAAAAGTATGGCTCCACCCAAACAAATGGAAACTGGAACG ACCAACGACGATGTTGACTACGAGTGGATTCCTCGTACTGCCCTTCGCAC TCCTGGAAGTAGCCAGACCAGTCCCAAGCAAAGGAAGGCCAAGCGTAACG CGGCTTCGGATTCGGATTAAACATCCCGACGTCCGCACCGGCTCGGACTT TAAGGGGCTTCAACATCATTACGCCCATGAGCAGACTCCGCCTCAAGATC AAATGGAGCTAGCCGAGGCTCACGACATCGAATTTGCCCAACCTCGCCGC TCGCCTCAGCCGAGCCGCCCAATCGGCCGCCCTCCCATTGTTGATTCCTT CTTCTTTCCCTGGCGTCATGGTAGTGTGGACTATGCCTTAAAATCTCGGT TGTGGCTCCGGTTTGTTCTTACCTTCACCTAAATGCTCCCCGGATGGTTG GTATCTCGGCCATTCGGGGAGCGGATCCATATCTATCATGTGTTCCGATT GTCGAACCGTAAGCCGATGATACTACACATTCTCAAGTCATGG
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Synonyms
The feature 'translocon-associated protein subunit alpha' has the following synonyms
Synonym
Tk04578
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